![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Tan0019331 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGCCGGCGACGGGAAATTTCAGAGCCCTAGCGCCTCCGAAGCTTTCGATTTCCCCTCCTGGCGACTGAGGTAACAAGAAGAGTGCCTCTTTTTCTCTTTGATTCGTATTTTAGGAACGATGCCGAACCCTCGGTCGTACCGGAAGGGGACGGAGGATAAGAATCGGAAGGGGAAACTTACGGAGAAGTCGTCATCGTTTCACGGAGAGAGTCAGACGAAGACGACGACGACACTCCGCCGGCCGAAGACGGATCCGGAGTTGTTGTCGTTCAAGAATCTAGGTTTATCGGCGCCGTCGCTGGATGGACGCCCGAAGATGACGAAATTACTCCTCAACGTGACGATTCAGGGCAGCCTAGGGCCGGTACAGGTGCTGATGTCGCCAGAGATGACCGTAGCCGATCTTATGGCGGCGACCGTACGCCAATACTTGAAGGAAGGCCGCCGACCGATTTTGCCGACTGCAGATCCCTCCGCCTTCGGGCTCCATTATTCACAATTTAGCTTGGAAAGTAAGCAATCGATCATAAACTCTCGTAACCGCCTTTGATTTCGATTGATTTTTTTTTAATTCATTCTGAATTTCGCGGGCGATTTCAACGAGGTAATGATTTGAATCTCAGGTTTGAATAAGGAAGAGAAGCTAATCGCCTTGGGATCGAGAAACTTCTTTCTGTGCCCTAGAAAATCGGACGACGACGACGATTTAATAGCTTCTTCGTCGTCGTCCTGCTCGAAACAGGCCAAAGAAAGCGCGAAGAGTACTTCCAGCAATTTCAGTTGGTTCAAATTCATCGATTTCCGGATTTAGATACCGCCATATCTTCAATCCGCCACTGTGAAAAATCATCTTCAAATTCTCTACGCCATATAAGTCATGGTAGAATTATCTCCATTTCTAAGAAGTTCTTAAGCGATTTGCAATTGCTTGGTTTGATTAATATCAGAATTCGATCGAGCAAAGGGAAGAGAATATTTCTGCAACTCTGTTCTTCGATTTCTTGCTCAGGATCCACACACGGGAAATTTTCAATTTTCAATTTTCAATTTTCAATATGTACAGAATATAGATTTCAGAAATCGGTTAGGTTAAATTATGTGAAAATTGTGTTGAATTCAATTGTGTGGCCTGAGATTTTCGGCCTTTCACCAATCATTTTCCTCGGATTCTGAAACTTCCCGATTCGTTGAACGGAGTCAGAGAAGGAAAAATCCTGAGATTCCGTGTGAGTTTTAGAAACTTCGTGAAATAAATAATGATGAGAAGAGAAACACGGTTTAATTTGATATGAGAAGAAGACGTTTGTGAAGAGCTGTATTGTAATTTGAATCACTACAAGTTCAATGTTTCTATGAAATTTTTCAGATATAGTTTTTTGTTTTTGGGGTTAAGATATTTTAGACATGTAGTTTGAGTTTTCTTCCCTTTTTATTCTTATACTTTCGAAAGTTCAAAATTAGGTTCTTATTGAGATTGCCC TGGCCGGCGACGGGAAATTTCAGAGCCCTAGCGCCTCCGAAGCTTTCGATTTCCCCTCCTGGCGACTGAGGTAACAAGAAGAGTGCCTCTTTTTCTCTTTGATTCGTATTTTAGGAACGATGCCGAACCCTCGGTCGTACCGGAAGGGGACGGAGGATAAGAATCGGAAGGGGAAACTTACGGAGAAGTCGTCATCGTTTCACGGAGAGAGTCAGACGAAGACGACGACGACACTCCGCCGGCCGAAGACGGATCCGGAGTTGTTGTCGTTCAAGAATCTAGGTTTATCGGCGCCGTCGCTGGATGGACGCCCGAAGATGACGAAATTACTCCTCAACGTGACGATTCAGGGCAGCCTAGGGCCGGTACAGGTGCTGATGTCGCCAGAGATGACCGTAGCCGATCTTATGGCGGCGACCGTACGCCAATACTTGAAGGAAGGCCGCCGACCGATTTTGCCGACTGCAGATCCCTCCGCCTTCGGGCTCCATTATTCACAATTTAGCTTGGAAAGTTTGAATAAGGAAGAGAAGCTAATCGCCTTGGGATCGAGAAACTTCTTTCTGTGCCCTAGAAAATCGGACGACGACGACGATTTAATAGCTTCTTCGTCGTCGTCCTGCTCGAAACAGGCCAAAGAAAGCGCGAAGAGTACTTCCAGCAATTTCAGTTGGTTCAAATTCATCGATTTCCGGATTTAGATACCGCCATATCTTCAATCCGCCACTGTGAAAAATCATCTTCAAATTCTCTACGCCATATAAGTCATGGTAGAATTATCTCCATTTCTAAGAAGTTCTTAAGCGATTTGCAATTGCTTGGTTTGATTAATATCAGAATTCGATCGAGCAAAGGGAAGAGAATATTTCTGCAACTCTGTTCTTCGATTTCTTGCTCAGGATCCACACACGGGAAATTTTCAATTTTCAATTTTCAATTTTCAATATGTACAGAATATAGATTTCAGAAATCGGTTAGGTTAAATTATGTGAAAATTGTGTTGAATTCAATTGTGTGGCCTGAGATTTTCGGCCTTTCACCAATCATTTTCCTCGGATTCTGAAACTTCCCGATTCGTTGAACGGAGTCAGAGAAGGAAAAATCCTGAGATTCCGTGTGAGTTTTAGAAACTTCGTGAAATAAATAATGATGAGAAGAGAAACACGGTTTAATTTGATATGAGAAGAAGACGTTTGTGAAGAGCTGTATTGTAATTTGAATCACTACAAGTTCAATGTTTCTATGAAATTTTTCAGATATAGTTTTTTGTTTTTGGGGTTAAGATATTTTAGACATGTAGTTTGAGTTTTCTTCCCTTTTTATTCTTATACTTTCGAAAGTTCAAAATTAGGTTCTTATTGAGATTGCCC ATGCCGAACCCTCGGTCGTACCGGAAGGGGACGGAGGATAAGAATCGGAAGGGGAAACTTACGGAGAAGTCGTCATCGTTTCACGGAGAGAGTCAGACGAAGACGACGACGACACTCCGCCGGCCGAAGACGGATCCGGAGTTGTTGTCGTTCAAGAATCTAGGTTTATCGGCGCCGTCGCTGGATGGACGCCCGAAGATGACGAAATTACTCCTCAACGTGACGATTCAGGGCAGCCTAGGGCCGGTACAGGTGCTGATGTCGCCAGAGATGACCGTAGCCGATCTTATGGCGGCGACCGTACGCCAATACTTGAAGGAAGGCCGCCGACCGATTTTGCCGACTGCAGATCCCTCCGCCTTCGGGCTCCATTATTCACAATTTAGCTTGGAAAGTTTGAATAAGGAAGAGAAGCTAATCGCCTTGGGATCGAGAAACTTCTTTCTGTGCCCTAGAAAATCGGACGACGACGACGATTTAATAGCTTCTTCGTCGTCGTCCTGCTCGAAACAGGCCAAAGAAAGCGCGAAGAGTACTTCCAGCAATTTCAGTTGGTTCAAATTCATCGATTTCCGGATTTAG MPNPRSYRKGTEDKNRKGKLTEKSSSFHGESQTKTTTTLRRPKTDPELLSFKNLGLSAPSLDGRPKMTKLLLNVTIQGSLGPVQVLMSPEMTVADLMAATVRQYLKEGRRPILPTADPSAFGLHYSQFSLESLNKEEKLIALGSRNFFLCPRKSDDDDDLIASSSSSCSKQAKESAKSTSSNFSWFKFIDFRI Homology
BLAST of Tan0019331 vs. ExPASy Swiss-Prot
Match: Q56XJ7 (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.1e-08 Identity = 50/157 (31.85%), Postives = 85/157 (54.14%), Query Frame = 0
BLAST of Tan0019331 vs. NCBI nr
Match: XP_022140298.1 (uncharacterized protein At4g22758 [Momordica charantia]) HSP 1 Score: 327.0 bits (837), Expect = 1.1e-85 Identity = 170/193 (88.08%), Postives = 182/193 (94.30%), Query Frame = 0
BLAST of Tan0019331 vs. NCBI nr
Match: XP_023513044.1 (uncharacterized protein LOC111777605 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 319.7 bits (818), Expect = 1.7e-83 Identity = 170/193 (88.08%), Postives = 179/193 (92.75%), Query Frame = 0
BLAST of Tan0019331 vs. NCBI nr
Match: KAG7010690.1 (hypothetical protein SDJN02_27486 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 318.2 bits (814), Expect = 5.0e-83 Identity = 171/195 (87.69%), Postives = 181/195 (92.82%), Query Frame = 0
BLAST of Tan0019331 vs. NCBI nr
Match: XP_008458628.1 (PREDICTED: uncharacterized protein At4g22758 [Cucumis melo] >KAA0033374.1 uncharacterized protein E6C27_scaffold111G00230 [Cucumis melo var. makuwa]) HSP 1 Score: 317.4 bits (812), Expect = 8.6e-83 Identity = 173/196 (88.27%), Postives = 180/196 (91.84%), Query Frame = 0
BLAST of Tan0019331 vs. NCBI nr
Match: KAG6570844.1 (hypothetical protein SDJN03_29759, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 317.4 bits (812), Expect = 8.6e-83 Identity = 171/195 (87.69%), Postives = 180/195 (92.31%), Query Frame = 0
BLAST of Tan0019331 vs. ExPASy TrEMBL
Match: A0A6J1CHP9 (uncharacterized protein At4g22758 OS=Momordica charantia OX=3673 GN=LOC111011001 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 5.2e-86 Identity = 170/193 (88.08%), Postives = 182/193 (94.30%), Query Frame = 0
BLAST of Tan0019331 vs. ExPASy TrEMBL
Match: A0A5A7SQA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00230 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 4.2e-83 Identity = 173/196 (88.27%), Postives = 180/196 (91.84%), Query Frame = 0
BLAST of Tan0019331 vs. ExPASy TrEMBL
Match: A0A1S3C8V7 (uncharacterized protein At4g22758 OS=Cucumis melo OX=3656 GN=LOC103497975 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 4.2e-83 Identity = 173/196 (88.27%), Postives = 180/196 (91.84%), Query Frame = 0
BLAST of Tan0019331 vs. ExPASy TrEMBL
Match: A0A6J1JFX4 (uncharacterized protein LOC111484138 OS=Cucurbita maxima OX=3661 GN=LOC111484138 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 1.2e-82 Identity = 170/193 (88.08%), Postives = 178/193 (92.23%), Query Frame = 0
BLAST of Tan0019331 vs. ExPASy TrEMBL
Match: A0A6J1FRI6 (uncharacterized protein LOC111448149 OS=Cucurbita moschata OX=3662 GN=LOC111448149 PE=4 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 3.5e-82 Identity = 169/194 (87.11%), Postives = 179/194 (92.27%), Query Frame = 0
BLAST of Tan0019331 vs. TAIR 10
Match: AT2G27830.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 169.1 bits (427), Expect = 3.5e-42 Identity = 97/181 (53.59%), Postives = 125/181 (69.06%), Query Frame = 0
BLAST of Tan0019331 vs. TAIR 10
Match: AT4G22758.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). ) HSP 1 Score: 61.6 bits (148), Expect = 7.9e-10 Identity = 50/157 (31.85%), Postives = 85/157 (54.14%), Query Frame = 0
BLAST of Tan0019331 vs. TAIR 10
Match: AT1G70780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 4.8e-07 Identity = 28/90 (31.11%), Postives = 54/90 (60.00%), Query Frame = 0
BLAST of Tan0019331 vs. TAIR 10
Match: AT1G23150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 124 Blast hits to 124 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 4.1e-06 Identity = 28/91 (30.77%), Postives = 52/91 (57.14%), Query Frame = 0
BLAST of Tan0019331 vs. TAIR 10
Match: AT5G37730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 48.9 bits (115), Expect = 5.3e-06 Identity = 25/88 (28.41%), Postives = 50/88 (56.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|