Tan0019326 (gene) Snake gourd v1

Overview


Name	Tan0019326
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Actin-related protein 2/3 complex subunit 4
Location	LG06: 73607360 .. 73614882 (+)
RNA-Seq Expression	Tan0019326
Synteny	Tan0019326

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGTCGATAGCAGATAATCCTTAGGTCGCTGGTTCGAATCCGGCAGGTCGGATTTTTTTTACCCTTCTTTAATTTTAATTTTTGTTTTTTCTTTGATCCGTTTTTATAATCTTATTAATTAAGACTTCTGATTAATTCTTCGTAGTTCATAAGAATCTCTCTTTTCTTTGCTCTTTTTGCTTTCTCCGGCGTCGGATTATTGGAGCTTTGGCCGCACAATCCCGTACTCTCGCGAGCTCCTTGCACGATCCAGTCATTTTTTCCATCGAAGTTTTCACTACAGCGCGCAAATTTTGATCTCCGAGAAGTACGCTTTCGAATTCAGAAATGGTTGGTAACGAACAATTCTTTCTCACTGTTGATCTTTGCTTTGTTTGAAATTGTCTCTATGAGTCTTATTAATCTGATGCCTGAATAATGAGAAGATCGTTGCGAATTAAGTTCATTGGTTTTACTTAGCAATGCCCGATTTAACTCATTCTCTTAGTGAAATTGATGGTGTTAATATACACGGACGCTTCTGGATTCGAAAACGTTTTGCCGATTTCTTCTTAGTATTAATATGATTTGTGGAGGAAGCAAGCTTCGTTCTGATAAGCTTCTGACTCTACGTTTTTGGCTTTTGATTATGTGTTTAGTTTAAATACTTAATTGTAGAATGAGATTGATCTTTTGTTTGTTTGTTTGTTTTTTCTCCTTTTCCTTTCCTATCTAATTTTCCGTCTGTATGTGCAAACTCAGGCAAATACTTTACGCTTGTATTTGACGTGCATTCGGAACACTCTTGAAGCGGCGATGTGCCTTCAGGTATTTCTGTCGTTGTCATGTTGCTGTTATTTCGATTCAATTTCATTTGAGTGGTGATTTTTTTGCAGTTTGATATGTTATTTCTGGAATCGAGCTTATTAGGTTCTGTAAAGTAGTTGTTCCTTGATTGTCTGAGAGCTATGTTAGCTGACTTTTGATTCTACGGATTATTGGATTTACGAACCTGAAGAATGCAATGTTAAATTTTTTTTGTATAAAGAATGCAATGTTAAAATGATGTGCAAGTGCGAGTGAAAATACTTTACGCATTACTAGGTTTTTTTTAATATCTGTCCAGAAGGGCGCTTGTGAGAGAAAATTAATTAAACAACTCTTTAATTTATGATAATAATCTAGAGGATCCTATGCTTTTAGATTGTGTCTCGAACAAGTCGAAATACTTTCTAATCTATACTTGTAGTTGAAAGAGAAAGAAGTCGTTGAACTTTGACGTTGTTTTTTTTCCTGCATGTATTCATTTTTCCTCTCGACGAAACTTCATAGACAGTGAGGTGACTTAAGTGGCCGAACTTGAATATGCCTCCAGATTAACCATATATGCGTTAAGCGTAGTGAATATATGTGTTCTTTTGAGTGCATTGAGTTGAGAGTGAATGAAGCTTACGCCTAGCATGATTAGTTAGTTATATTTGTGTATGGTGTTCCTCCCTGATACTTTATTTTCTAATATAAATCTCCCTGCCTTGTCGGGCTTGCTTTCACATGTTTTGGGTGTTGGATTTATCAATTTTTTTTCCCCACATGATTGCAGAATTTTCCTTGCCAAGAAGTTGAAAGACATAACAAGCCGGAGGTTGAACTAAAGTATGCTCATCTCTTCTGCATCTTAAAACCTCTTACGGTTGTTTGTTAGATTTATCATCGTTTGTGAGCCACTGGTGACCTGAGTTGCCTGGTTAATGATTTTATTCCGAACCTCCATGTTGAACATTCACTGAAAAATCCCGATCCTTCCTTTTGAAGTTTATTTAAAGCAATTGAACTAGGGAACTTTGTCATTGGAGATAGCTATTCTTTTATTAATATTGCATAGAGGTATGATCATTATTCTATTATATAAATCATATCTGGTTACTTCGTAGCTTGGTTGTCACATGTTAAGTCTTCAATAGCATTTTCTTGTTGGTTGGCTTATTTTAGCCGATCTCTATTGGTTAGTTGAATATGCTGCCGTTGGTAACACCTACCTGTCTAGATAACTTGTATAAATACATGCCATTGCCAATTAGCGGGCAGATAAATAATAACTACTCAGAAAGGAATTATACCACTCTCCAAGTATTGTCAGTTTCCTGCTTGCACCACGCTAATTGAATATTCACATGGAAAGGAACAATGAAAATATGCTAATTTATGCCTCCTTTTCTTTTTTTTGCGTATTCCCTCTCCAGGACCAGCTCGGAACTTCTTCTCAATGCTGTAAGATCATAGCATAAATTTAAATAATAAGCATTCCACCATTGACAATTTAGTTGGTTTATTTGACGGGCCACCAGGGGGGGGGGGGGTGTTTGGAAAATCATCTTGAAGCATTTATGACACCTTTGACTTTCAGACTTGAACCTCGTCATGCCTCATGATGTGGAACTGTTTTATGTGAAGGAATTTTGAATTTCCCGCAGTGGAACAATTTTTTTTCTACTGCCAATTGCCATTAAATAAATGTCGGCGAATGTAAATTTAATTCTAGTTAAACATTTTTTTCATACCTTTTCTTTTAAATGGGAGAATCGTGTTCATGCAAAAAACAACATTGGGAGTTAGGATTAGCTGAGGGAATGGCTTTATATCTTTACATAACTGTGATTTGCTGATGGACGTCTATGATCTCGCTTTATTGTTTTGCTCTTGCAGATCTTAATATGTCGAAATGAGTCCGAGAAGTGTTTGATTGAGACCTCTATAAATTCACTTCGCATCAGTCTCAAGGTGATTTTATTTTCTTTTTAACTTAATTTAATAGGCTCAAGGTAACTTTGGATGAATTTTGTTTACATGTCTTGCTGATATTGATTAGGCGACAAAGAGACAGATATCCAATTCCTATGGGTCTTTTTAACCGCTTAGGGGGCGTTTGGATCGCAGAATTGGGTTGAGTTGAGTTGAGTTAGGTTGAGTTGTGCAGAGTTGTTTTGTCAGTGAGTTCTAGAAATTAGTGTTTGGGGTGTAGAGTTGAGTTGAGTTAAGTCAGAAAGTGTTTGGGGTGCAGAGTTTAGTTATTATGTCAGGGGTATCTGGTGTAGTTTTTTTGTAAAGTGAATAAGTTTGATTTTTTGTGACTTTTTTCCTTACATTTTTTGTTTCCATCAAATCAATGACAAACATATTTGCCTACAATTTCAAAACTTCATTATGAGATCAACTACAAATTTACAATATATATTACCATTTGCAAGATTTATGAGATATTTAGAAAAGTATTAGATATTGAGATTGATACCAATTTTTCTTTTCCAATAAAATTCATTTTTTATCTTATGTTATTGAGAACATATTCTTCAATATGAATGAGTTTCTTCTTTTTAAGCACATATTCACTATTAATCTATTTATTTTAATGTACTTAGGTATTAGTATTAATACTTTGCAAGAAAAACGTGCATTCATTGTCTACAAATCAAATACAAACACATTTGTCTACAATTTCAAAACTCAATTATGTTATCAATTATAAAATTACAATATATATTACTATTTTCCAAATGTATGTTAGAGATATTTGCAAAAGTAATGGATATTGAGTTTGATATCAATATTTCTTTTTCAATAAAATTCATTATTTAGATTTTTTACTCTTCAATATGAATTTTATTCTTTTTTTTATGCACATATTCACCACTACTTTTTATTTTAATTTAGGTAGGTATTAGTATTTATACTTTGCATATGAAGAGTATTTATTTAAATTTTTCTAAATACAAGCATTGTCTATGGACATCTTTAGAATGAAATAAATAGTTTATCACGTGAATATGATAAAAATATGTCAATATACTTAAATATTTTATGTCACATTGAAGTTGCATATCTACAAAATATTATATATGTCATCAAGGTTCTAGCAACGTCGTTATGCTGCCAAAATTTTCGGTGCAGGCGGTGTTGCTTAGTAACGTCCCTAGGAAATTTTGGGTTTGAAAAATTAAGGTCGTTACAGTTGGTATCAGAGCATGAGTTTTAGATTTTGCATACTCGCCTACATCGTAGGTAACGATCATCATAACCTTTCGTAGGAAGTCGCCTCGTCATCTCCAGGTTTGCTTTTATTTTTTAAAGTAGTTAAAGTTATTTGAGTTGCTTGTGTGTTAACATTTGTTATGCTATGCTTTTGACTTCTTTGTTCTTGTGCTAAGGTAGTTTAGAGTTTAGTTTAGATTATGGTTTAAGGATGTGGCCGTTGTAAAGTTCTAGCAACTTTCGAGGACGAAAGTTTTTCTTAGATAGGTATATTATGATAACCCGTAAAATTAGGTGTTTTAATTGTATTTGTTTAAATTTGAATCTTTGGATAATCATATCAGGATTAGGAAATAGCGTTTTAAAGTTTAAAAGAAGATTAAGATTTCTGTTTTAAAAAAGTTTAGGATTCCTTTTTATAAAAGAATTAAAATTCTTTGTTCTAAAAGGATTAGGACTTTTTGGTGTCTACTTAAACTAGAGTATTAGCAACTTAAATGCACACTTCAAAACTCTCCTCTTCTTCTCCTTCTTCTCCTTTTCTCCACTTTCTTCATCTCGCTGGATTGTCGCCGGAAAGTCGCCGGACCGTTGTCGAAAGATCGGTGGAAAGTTTCCGGATCGTCATCGAAAAGTCGTCGGACCACTGCCGGAAAATACTGTATGGGTGAGTTAATAACTCAACTCCATGGGGTTGAGTTATTAAGTCACCCCCTTAAAGTGCTCCTTTGGTTTGGAGCTAGTTCTTGAGGATTTTCTCGTGGATTGAGATGAATTCTTAATATTGGAGTCAATATCTGGATTCGCAACTAGATACAAGAACCACTAGGCTATGAATATGTGCAAGTAAAAGCAGATGTTAACAGCTAAGAAGAGTAGTTGTATATTATTGGTTTTTGGTCATCTTTTTAACAGTTAATCATCCGTCAGGTTTGTCCAGAAGGTTTAACTCCAACTTTTCATTGGGATTTATTTGAGGTCTAGGCCGTCTCAGTCTGGGTTCTATGGTTTTACGTTTGTGCTGTTTTATGTTGGCAATTTGAAAGGAGTAGGCAGTTTTTTAGAAAACTTTGGAGAGTCTCGTTCATTAAGGAAAAAGGTCAAAAGGGCGTGGCTTCTTCTTGGACTGCTGGTTTAAAGTTTGTTCATTGGGGATCATTTTCTTTACTGAAATAGATGGGAAGATATAATGTATGCTTGCGGAGTATTGTTTTTCTATTCTCCTGTAAACATTTTTTTTTCCTTTTCAAAAGGGCAGTAATAGATGAAGAAAGTGTTATATTTATAATTACAATTACAGCACAAATCTAACTTCAACCTTGAAGGCTTATATACTGCTATTAGTCACTTTCCATCTATTTCATTACTTAAGGCTAACTCCTTTTACCTTTTCTAGCTTACGTGAAGAAGAACCGCTGAATGTATGAGATTATCATCCCAAACTAACATCATCTTGTTTGCAATTATTTTATGAATGAACTCTTTCTTGTGCGTAGGTTAAGCAGACAGATGAACTGGAGAACATCCTAACTAAAAAGTTTCTTCGATTTTTGTCAATGAGAGCAGAAGCTTTCCAGGTTCTGAGAAGAAAACCTGTACAGGTACTGACTGTGTCTAATCATGAAGTTGACTTTGTGTTTAAATTTGAGATGATGTATTCAAGAGATTTAGAGATTATTTATGACTAACTCAAATCTTGGAGTTGTTTTAGTAGGATGATTGTGCCTTCACAAGTTACCATGAAAATTTCATGTTTCATGTTTCCTTGAGGGGGCGAGATTTAAACTGGCTTATCCTTGACTGAGAAAAATCTGAAAAGCGAATTCTTTGTTCATTTGGCTTATTTATCTTTGTGATAGAGATATAAGAGACCCCCAATTTCTTTATTTTATTCTGCTTATTATCGGACTGAACAATAAAAAGAAACTTTTTTACAACTATTTGTGTCTGCGTAAGTTTGGTTGCCATGGTTCTGGAAATGACCTGCAAATAACTTATATTTCCTTTTGGTATCATTTGACAGGGATATGACATTAGCTTTCTCATAACAAACTATCACTGTGAGGAGATGCAGAAGCAAAAACTCATTGATTTTATTGTACAATTCATGGAGGTAAGAACTTTATTATCACCACTACAAATCAGTATTCTGTTAGTTACTTGATTTCATTCTATGCAACTTAATTTCTCCCTGATTTGCTCTTGGCCATCCTACTACCCAATTTGCTCTTCAATTTAATTATTCTTAGTGCATGAGTGATTCTGAGTGAAATGGTTAAAAACACTTCGGTCATATTTAAAATCACTCCCAAACATACGTTTAATCCTTCAAAATCAATTTTGATGGTATAAAAATTGTGTTTAAAAGTATAAACTTTCTTTAAAATCACTCCCAAACGTACACTATTTCAAAAACTTTCTTTAACTAGGTTTTGTGGTACGAGTAGCTTCTTCATTCAGGGGAAAATCCATAGGTTGATTGACTCTTTTGTTTTAGTTCAACCCATGAAGGGAAAAATTTGAACCTATGATCTCGTGGTTGAGGGCAAGGTTGACATTGGTTAATTGACTCTTACCTGCTCAAGTTTTTATGCTTGAATTAATATTAAGAGGGAATATTTCTAAACTTTTGGATTCGTGCTTTTTTTTTTTTTTCACACTTACACCAATCAACCCAAAAACTTATGCTAATAGGTTATGATAAATTTAGTTATATCAAACTCTAACACTCCCCCTCACTTATGGACTTGGAAATTAAAAAAAAGGCCCCACAAGTGGCAATCAATATTAATTGGGGAAGGAATTGACATTATTGGAATTTGTACACAGGATCTCGTACTCCAAAAACTTAAGCTGATAGGTTATGATAAATCTAATTATATCAACACACTCCAACACTCTCTCACTTGTGGGCTTGGAAATTTGAAGAAAAACCAAACAAGTAGAAATCAATATTAATTAGGGAGAAAACGATCTTATAGGGATTCGAACATAGGATCTCCTAATCTGATATCATGTTAAATCACCAATCAACCCAAAAACTAAAGCTATGTTAAACTTAATTATATCACACCCCAACGGTTCTAATGAATAAATTGTCAAATTTAGTGAGTTGAGAATGTATTTAATTAGATTTTTTTTTTCCATGTGCAGGATATTGATAAAGAGATTAGTGAACTTAAAATGTCCGTGAACACTCGAGGAAGGCTTGTAGCAACAGAGTTTTTAAAGCAATTCATATGATGCCTAGTATATAGCATCTAGGTAAACTTGACTCTCCAAAGTCTTCGAGATTATTCTATTGCTGCTTGTTGTGAATATCCCTTATACAACTAACGAGATTTTGATACTTCATTGCGCCTTTTTATTTTTATTGTAGCACTTAATTGTCGTATAAATTAGCATAGGTTTTGGTTTTGATCTTAGATTGATCCAAAAATCTAAGGGCCCGTTTGATAATCATTTGATTTTTTATTTTTAGTTTTTGAAAATTAAGCCTAAAAATATTATTTCTTCC

mRNA sequence

GTAGTCGATAGCAGATAATCCTTAGGTCGCTGGTTCGAATCCGGCAGTTCATAAGAATCTCTCTTTTCTTTGCTCTTTTTGCTTTCTCCGGCGTCGGATTATTGGAGCTTTGGCCGCACAATCCCGTACTCTCGCGAGCTCCTTGCACGATCCAGTCATTTTTTCCATCGAAGTTTTCACTACAGCGCGCAAATTTTGATCTCCGAGAAGTACGCTTTCGAATTCAGAAATGGCAAATACTTTACGCTTGTATTTGACGTGCATTCGGAACACTCTTGAAGCGGCGATGTGCCTTCAGAATTTTCCTTGCCAAGAAGTTGAAAGACATAACAAGCCGGAGGTTGAACTAAAGACCAGCTCGGAACTTCTTCTCAATGCTATCTTAATATGTCGAAATGAGTCCGAGAAGTGTTTGATTGAGACCTCTATAAATTCACTTCGCATCAGTCTCAAGGTTAAGCAGACAGATGAACTGGAGAACATCCTAACTAAAAAGTTTCTTCGATTTTTGTCAATGAGAGCAGAAGCTTTCCAGGTTCTGAGAAGAAAACCTGTACAGGGATATGACATTAGCTTTCTCATAACAAACTATCACTGTGAGGAGATGCAGAAGCAAAAACTCATTGATTTTATTGTACAATTCATGGAGGATATTGATAAAGAGATTAGTGAACTTAAAATGTCCGTGAACACTCGAGGAAGGCTTGTAGCAACAGAGTTTTTAAAGCAATTCATATGATGCCTAGTATATAGCATCTAGGTAAACTTGACTCTCCAAAGTCTTCGAGATTATTCTATTGCTGCTTGTTGTGAATATCCCTTATACAACTAACGAGATTTTGATACTTCATTGCGCCTTTTTATTTTTATTGTAGCACTTAATTGTCGTATAAATTAGCATAGGTTTTGGTTTTGATCTTAGATTGATCCAAAAATCTAAGGGCCCGTTTGATAATCATTTGATTTTTTATTTTTAGTTTTTGAAAATTAAGCCTAAAAATATTATTTCTTCC

Coding sequence (CDS)

ATGGCAAATACTTTACGCTTGTATTTGACGTGCATTCGGAACACTCTTGAAGCGGCGATGTGCCTTCAGAATTTTCCTTGCCAAGAAGTTGAAAGACATAACAAGCCGGAGGTTGAACTAAAGACCAGCTCGGAACTTCTTCTCAATGCTATCTTAATATGTCGAAATGAGTCCGAGAAGTGTTTGATTGAGACCTCTATAAATTCACTTCGCATCAGTCTCAAGGTTAAGCAGACAGATGAACTGGAGAACATCCTAACTAAAAAGTTTCTTCGATTTTTGTCAATGAGAGCAGAAGCTTTCCAGGTTCTGAGAAGAAAACCTGTACAGGGATATGACATTAGCTTTCTCATAACAAACTATCACTGTGAGGAGATGCAGAAGCAAAAACTCATTGATTTTATTGTACAATTCATGGAGGATATTGATAAAGAGATTAGTGAACTTAAAATGTCCGTGAACACTCGAGGAAGGCTTGTAGCAACAGAGTTTTTAAAGCAATTCATATGA

Protein sequence

MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNYHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI

Homology

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BLAST of Tan0019326 vs. ExPASy Swiss-Prot
Match: F4JUL9 (Actin-related protein 2/3 complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=ARPC4 PE=1 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 1.7e-82
Identity = 155/169 (91.72%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEK 60
           MAN+LRLYL CI+NTLEAAMCLQNFPCQEVERHNKPEVELKTS ELLLN +LICRNE+EK
Sbjct: 1   MANSLRLYLACIKNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCEEMQKQKLIDFI+QFMEDI+KEI +LK SVNTRGRLVATEFLKQF+
Sbjct: 121 YHCEEMQKQKLIDFIIQFMEDIEKEIRDLKESVNTRGRLVATEFLKQFM 169

[Close]

BLAST of Tan0019326 vs. ExPASy Swiss-Prot
Match: O96625 (Actin-related protein 2/3 complex subunit 4 OS=Dictyostelium discoideum OX=44689 GN=arcD PE=1 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.7e-58
Identity = 109/161 (67.70%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 8   YLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEKCLIETSI 67
           YL CIRNTL A+MCLQNF  Q VERHNKPEVE+KTS EL+LN ++I RN++E+ LIETSI
Sbjct: 8   YLNCIRNTLTASMCLQNFGSQIVERHNKPEVEVKTSKELVLNPVIIARNKNERVLIETSI 67

Query: 68  NSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNYHCEEMQ 127
           NS+RIS+ +K++DE++ IL KKF+RFL  RAE F +LRRKPV+GYDISFL+TN+H E M 
Sbjct: 68  NSIRISVSIKKSDEVDVILAKKFVRFLQQRAENFIILRRKPVEGYDISFLVTNFHTENMF 127

Query: 128 KQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 169
           K KL+DFI+QFMEDID+EIS+LK+++N RGR+VA+E+LK F
Sbjct: 128 KHKLVDFIIQFMEDIDREISDLKLTLNARGRIVASEYLKNF 168

[Close]

BLAST of Tan0019326 vs. ExPASy Swiss-Prot
Match: Q641G7 (Actin-related protein 2/3 complex subunit 4 OS=Xenopus laevis OX=8355 GN=arpc4 PE=1 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 4.3e-57
Identity = 110/168 (65.48%), Postives = 136/168 (80.95%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEK 60
           M  TLR YL  +R TL+AA+CL+NF  Q VERHNKPEVE+++S ELLL  ++I RNE EK
Sbjct: 1   MTATLRPYLNAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVVISRNEKEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120
            LIE SINS+R+S+ VKQ DE+E IL  KF+RF+ MRAE F +LRRKPV+GYDISFLITN
Sbjct: 61  VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120

Query: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 169
           +H E+M K KL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168

[Close]

BLAST of Tan0019326 vs. ExPASy Swiss-Prot
Match: Q148J6 (Actin-related protein 2/3 complex subunit 4 OS=Bos taurus OX=9913 GN=ARPC4 PE=1 SV=3)

HSP 1 Score: 221.9 bits (564), Expect = 5.6e-57
Identity = 110/168 (65.48%), Postives = 136/168 (80.95%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEK 60
           M  TLR YL+ +R TL+AA+CL+NF  Q VERHNKPEVE+++S ELLL  + I RNE EK
Sbjct: 1   MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120
            LIE SINS+R+S+ VKQ DE+E IL  KF+RF+ MRAE F +LRRKPV+GYDISFLITN
Sbjct: 61  VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120

Query: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 169
           +H E+M K KL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168

[Close]

BLAST of Tan0019326 vs. ExPASy Swiss-Prot
Match: P59998 (Actin-related protein 2/3 complex subunit 4 OS=Homo sapiens OX=9606 GN=ARPC4 PE=1 SV=3)

HSP 1 Score: 221.9 bits (564), Expect = 5.6e-57
Identity = 110/168 (65.48%), Postives = 136/168 (80.95%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEK 60
           M  TLR YL+ +R TL+AA+CL+NF  Q VERHNKPEVE+++S ELLL  + I RNE EK
Sbjct: 1   MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120
            LIE SINS+R+S+ VKQ DE+E IL  KF+RF+ MRAE F +LRRKPV+GYDISFLITN
Sbjct: 61  VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120

Query: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 169
           +H E+M K KL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168

[Close]

BLAST of Tan0019326 vs. NCBI nr
Match: XP_011649071.1 (actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus] >XP_038907196.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Benincasa hispida] >KGN61430.1 hypothetical protein Csa_006614 [Cucumis sativus])

HSP 1 Score: 322.0 bits (824), Expect = 3.0e-84
Identity = 166/169 (98.22%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEK 60
           MA TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLN ILICRNESEK
Sbjct: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCE+MQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

[Close]

BLAST of Tan0019326 vs. NCBI nr
Match: XP_008457157.1 (PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis melo])

HSP 1 Score: 320.5 bits (820), Expect = 8.9e-84
Identity = 165/169 (97.63%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEK 60
           MA +LRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLN ILICRNESEK
Sbjct: 1   MATSLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCE+MQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

[Close]

BLAST of Tan0019326 vs. NCBI nr
Match: XP_007034310.1 (PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Theobroma cacao] >XP_020215469.1 actin-related protein 2/3 complex subunit 4 [Cajanus cajan] >XP_022733788.1 actin-related protein 2/3 complex subunit 4 [Durio zibethinus] >XP_022733789.1 actin-related protein 2/3 complex subunit 4 [Durio zibethinus] >EOY05236.1 Binding isoform 1 [Theobroma cacao])

HSP 1 Score: 320.1 bits (819), Expect = 1.2e-83
Identity = 164/169 (97.04%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEK 60
           MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTS ELLLN +LICRNE+EK
Sbjct: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

[Close]

BLAST of Tan0019326 vs. NCBI nr
Match: XP_008456149.1 (PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_008456150.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_008456151.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_008456152.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_008456153.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_008456154.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_008456156.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_016901908.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_016901909.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo])

HSP 1 Score: 320.1 bits (819), Expect = 1.2e-83
Identity = 164/169 (97.04%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEK 60
           MA TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLN ILICRNESEK
Sbjct: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKV+QTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVRQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCE+MQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF+
Sbjct: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFL 169

[Close]

BLAST of Tan0019326 vs. NCBI nr
Match: XP_022958751.1 (actin-related protein 2/3 complex subunit 4 [Cucurbita moschata] >XP_022958752.1 actin-related protein 2/3 complex subunit 4 [Cucurbita moschata] >XP_023006428.1 actin-related protein 2/3 complex subunit 4 [Cucurbita maxima] >XP_023548159.1 actin-related protein 2/3 complex subunit 4 [Cucurbita pepo subsp. pepo] >KAG6574841.1 Actin-related protein 2/3 complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 320.1 bits (819), Expect = 1.2e-83
Identity = 164/169 (97.04%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEK 60
           MAN LRLYL+CIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSEL+LN ILICRNESEK
Sbjct: 1   MANALRLYLSCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELILNPILICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCEE+QKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEELQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

[Close]

BLAST of Tan0019326 vs. ExPASy TrEMBL
Match: A0A0A0LHM5 (Actin-related protein 2/3 complex subunit 4 OS=Cucumis sativus OX=3659 GN=Csa_2G120960 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.5e-84
Identity = 166/169 (98.22%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEK 60
           MA TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLN ILICRNESEK
Sbjct: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCE+MQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

[Close]

BLAST of Tan0019326 vs. ExPASy TrEMBL
Match: A0A1S3C5J1 (Actin-related protein 2/3 complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103496896 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.3e-84
Identity = 165/169 (97.63%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEK 60
           MA +LRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLN ILICRNESEK
Sbjct: 1   MATSLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCE+MQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

[Close]

BLAST of Tan0019326 vs. ExPASy TrEMBL
Match: A0A1S3C2N8 (Actin-related protein 2/3 complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103496175 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.6e-84
Identity = 164/169 (97.04%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEK 60
           MA TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLN ILICRNESEK
Sbjct: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKV+QTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVRQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCE+MQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF+
Sbjct: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFL 169

[Close]

BLAST of Tan0019326 vs. ExPASy TrEMBL
Match: A0A6P5Y065 (Actin-related protein 2/3 complex subunit 4 OS=Durio zibethinus OX=66656 GN=LOC111287465 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.6e-84
Identity = 164/169 (97.04%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEK 60
           MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTS ELLLN +LICRNE+EK
Sbjct: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

[Close]

BLAST of Tan0019326 vs. ExPASy TrEMBL
Match: A0A6J1H2P7 (Actin-related protein 2/3 complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111459934 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.6e-84
Identity = 164/169 (97.04%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEK 60
           MAN LRLYL+CIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSEL+LN ILICRNESEK
Sbjct: 1   MANALRLYLSCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELILNPILICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCEE+QKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEELQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

[Close]

BLAST of Tan0019326 vs. TAIR 10
Match: AT4G14147.1 (protein binding )

HSP 1 Score: 306.6 bits (784), Expect = 1.2e-83
Identity = 155/169 (91.72%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEK 60
           MAN+LRLYL CI+NTLEAAMCLQNFPCQEVERHNKPEVELKTS ELLLN +LICRNE+EK
Sbjct: 1   MANSLRLYLACIKNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCEEMQKQKLIDFI+QFMEDI+KEI +LK SVNTRGRLVATEFLKQF+
Sbjct: 121 YHCEEMQKQKLIDFIIQFMEDIEKEIRDLKESVNTRGRLVATEFLKQFM 169

[Close]

BLAST of Tan0019326 vs. TAIR 10
Match: AT4G14147.2 (protein binding )

HSP 1 Score: 262.3 bits (669), Expect = 2.7e-70
Identity = 139/176 (78.98%), Postives = 150/176 (85.23%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNAILICRNESEK 60
           MAN+LRLYL CI+NTLEAAMCLQNFPCQEVERHNKPEVELKTS ELLLN +LICRNE+EK
Sbjct: 1   MANSLRLYLACIKNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEEMQKQKLIDFIVQFMEDIDKE-------ISELKMSVNTRGRLVATEFLKQFI 170
           YHCEEMQKQKLIDFI+QFME   +E       +SE K      G ++ T  +KQ +
Sbjct: 121 YHCEEMQKQKLIDFIIQFMEARYRERNKGLEGVSEYKRKTRCYG-VLETVHVKQLL 175

The following BLAST results are available for this feature:

BLAST of Tan0019326 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JUL9	1.7e-82	91.72	Actin-related protein 2/3 complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
O96625	1.7e-58	67.70	Actin-related protein 2/3 complex subunit 4 OS=Dictyostelium discoideum OX=44689...	[more]
Q641G7	4.3e-57	65.48	Actin-related protein 2/3 complex subunit 4 OS=Xenopus laevis OX=8355 GN=arpc4 P...	[more]
Q148J6	5.6e-57	65.48	Actin-related protein 2/3 complex subunit 4 OS=Bos taurus OX=9913 GN=ARPC4 PE=1 ...	[more]
P59998	5.6e-57	65.48	Actin-related protein 2/3 complex subunit 4 OS=Homo sapiens OX=9606 GN=ARPC4 PE=...	[more]

BLAST of Tan0019326 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649071.1	3.0e-84	98.22	actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus] >XP_038...	[more]
XP_008457157.1	8.9e-84	97.63	PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis melo]	[more]
XP_007034310.1	1.2e-83	97.04	PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Theobroma cac...	[more]
XP_008456149.1	1.2e-83	97.04	PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_0...	[more]
XP_022958751.1	1.2e-83	97.04	actin-related protein 2/3 complex subunit 4 [Cucurbita moschata] >XP_022958752.1...	[more]

BLAST of Tan0019326 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHM5	1.5e-84	98.22	Actin-related protein 2/3 complex subunit 4 OS=Cucumis sativus OX=3659 GN=Csa_2G...	[more]
A0A1S3C5J1	4.3e-84	97.63	Actin-related protein 2/3 complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
A0A1S3C2N8	5.6e-84	97.04	Actin-related protein 2/3 complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
A0A6P5Y065	5.6e-84	97.04	Actin-related protein 2/3 complex subunit 4 OS=Durio zibethinus OX=66656 GN=LOC1...	[more]
A0A6J1H2P7	5.6e-84	97.04	Actin-related protein 2/3 complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Tan0019326 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14147.1	1.2e-83	91.72	protein binding	[more]
AT4G14147.2	2.7e-70	78.98	protein binding	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008384	Actin-related protein 2/3 complex subunit 4	PFAM	PF05856	ARPC4	coord: 1..167 e-value: 8.6E-77 score: 256.5
IPR008384	Actin-related protein 2/3 complex subunit 4	PIRSF	PIRSF039100	ARPC4	coord: 1..169 e-value: 1.8E-86 score: 286.1
IPR008384	Actin-related protein 2/3 complex subunit 4	PANTHER	PTHR22629	ARP2/3 COMPLEX 20 KD SUBUNIT	coord: 1..168
IPR034666	Arp2/3 complex subunit 2/4	GENE3D	3.30.1460.20		coord: 1..168 e-value: 2.9E-81 score: 272.9
IPR034666	Arp2/3 complex subunit 2/4	SUPERFAMILY	69645	Arp2/3 complex subunits	coord: 3..168
None	No IPR available	PANTHER	PTHR22629:SF0	ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 4	coord: 1..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0019326.1	Tan0019326.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034314	Arp2/3 complex-mediated actin nucleation
biological_process	GO:0030833	regulation of actin filament polymerization
biological_process	GO:0030041	actin filament polymerization
cellular_component	GO:0005885	Arp2/3 protein complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0051015	actin filament binding