Tan0019317 (gene) Snake gourd v1

Overview


Name	Tan0019317
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	30S ribosomal protein S1
Location	LG10: 10408846 .. 10413195 (+)
RNA-Seq Expression	Tan0019317
Synteny	Tan0019317

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCACTACCTTATCCAACCCAAAACCTCATCAGACTGTTTACAGAGTAGGAGCCTGTGAGGGAAGAAGGAAAATGGCTTCCATGGCTCAGCAATTCACTGGGCTGCGATGCGCGCCTCTTTCTTCTTCGCGTCTCTCGAAGCCATTTTCTTCGAGGCATTTGCAGAACAAGGCCCGTTCACTTCCCGTTCAAGCTGCAGTCATTTCGGGCCCCATTCCCAGTCCACAGACCAAGGAGCGTTTCAAGCTCAAGGAGGTCTTTGAAGATGCCTATGAACGCTGCCGTAACGCCCCTGTAGAAGGCATTTCCTTCACTCTCGAGGACTTCCATGCCGCTCTTGAGAAATACGACTTCGATTCTGAATTGGGAACGAAGGTTATTTCCGGGTTTTTTTTTTCTTTATTGTATTTTGTGTGGAAGGGATGTTGTGAAGTTGAATTGTTTGTTAATTTGATGTTTGGGAATTGGGAATTGTTTTGATAGTGTTGGATTCTAGTTCGTTATGTGATTTTGTGAATTTGGATACTGTGAACTTGAATGGTTTGTTAATTCGATGTTATGGTGGGAAATGGAAGTGGGGTTGCTTATGGGAATTGGGAAGTATATTGATAGTGTTATCTTCCAGCATAACGGTGAAACGCTAGACCTGCATTTGAAGGAGATTGGGTTGTAATTTATGCAGTGTCTCTTTTCAGGTGAAGGGTACTGTGTTCTGTACGGATGCTAATGGAGCACTTGTTGACATTACTGCCAAGTCATCTGCATACTTGCCAGTGCAGGAGGCTTGCATTCACAGAATAAAACATGTAGAAGAAGCAGGAATGTTTCCTGGTTTGAGAGAGGAGTTTGTTATTATTGGTGAGAATGAAGCTGATGATAGCTTGGTTTTGAGCTTGAGATCCATCCAATATGACCTGGCTTGGGAGAGGTGCAGGCAGCTTCAAGCAGAGGATGTTGTTGTCAAGGGCAAGGTGGGCATTTCCACTCCAATCTCTGGTTCTTTTGATTGTCTTTGTTGTTTGAAGTATGGGCGTACGACCGTTGTCTAGCTGTGTAATAAGAAACTAGGAACTACTATAACATTATCGGTATCATTAATTTTAAATCACCACTAAACTCAAAAGCTTAAGTTGATGGTTTGCTATAAATTTAATAGGACTTCGACTTAGTCTTTGATACTATGCCAAATCGCCACTAAACCCAAAAGCTTAGACAGATAGGTAGGAGTAAATTTAATTTTTTTTATTAATACAACAATTCATATGTAGCCATTCTTTTTTGTTCAATATTCAGGTGGTTGATGCAAACAAAGGTGGAGTTGTGGCAGTTGTGGAAGGTCTAAGAGGGTTTGTCCCTTTCTCACAGATATCGACGGTATTTTTTTTATTAGCTATTAATGACTTTCACATTTTGGAAGATTTCCTCGTTTTATGTATATGTAAGAGATTATGGTTACTGTGGGAGTAAAGCATTTTAGTTTCTCACAATTGTTATGGTTTTACGTGGCTTTATTTACAAAGGTCGTGATTTCCCACTCCGCTCCCTTTCTTCTATGTGTGAATTCCTTTCCTTTTTGGTGTCAGGGATTATAGATGTAACAATTCGGATTATTGGTATTATTTTAACTTTCTTGATGTTAATTATTAATTATATACTGCTAATTAACATCACACCTCCTTTTTGTATTTTGTGTTCGTGTAATTATTTCAGAAATCAACTGCTGAAGAGCTTCTCAACAAGGAGCTTCCTCTGAAGTTTGTGGAGGTTGATGAAGAACAATCGAGGCTTGTCCTTAGTAACCGTAAGGCCATGGCTGACAGCCAGGCACAGCTTGGAATTGGATCAGTGGTCACTGGGACGGTTCAAAGCCTTAAACCTTATGGTGCATTCATTGACATTGGTGGAATCAATGGTCTTCTTCATGTCAGTCAAATCAGTCATGATCGGATATCAGATATTGCAACAGTTCTTCAGCCTGGAGACACTCTCAAGGTAGTTTAATGGCCTTCAAGTGATTTTTAAGGGCTTCATACAGTCATGATCCCAAGTTTCACCATGAGTTTTTCTGGTTTAGGTCATGATATTGAGCCATGATCGTGAGAGAGGCCGAGTTAGTCTTTCTACCAAGAAGTTAGAGCCTACTCCTGGAGACATGATTCGAAATCCAAAGCTCGTCTTTGAGAAGGTATTCTTTTTGCTAGCTAGAGTTATCTTTTTCTGTCATTTTTGTATTGATGCTGCTCTTTTTTGTTATGTGTACATGTACTTGTACACGCGAACGCGCTTTGATCTTTCAGCTACAAGGTTACCATAACGATAAATTTCACTAGTTAAAGTGCAGCTTTTCATATGGCCAAGATTGTGCCTAGGGTAGAGGAAAGTACTAACTAATGCTAATTCGCCTTCACCTCTTGAAGCATGTTTTTTCTTTCTTGTTTTCTGCATTTTAAAACTACAATTATATCATACTCTCTCTATTAGATTTTGGGTAGTTATCCTTTGAATGTTGAAAGGCAAACCTAGTGTCCTATGGAGGAATGCTTGAAAGCTCTATTCTGGTATATTTGGATATAGAAGGTGGTAAATATTTTGAAAATAGAGAGAGAGATTAGAGTTTCTGGATCCTTTGTTTTTGTAGAGCCTCTTGTTAGAGCACACGTGATAGGAATATTTGTAATTATTACTGGATGGCCTAGATGTAACCTCCTGTGGGCTCATTGGGGTTCTACCTTATCTTCTTTCTAGCTTTTGTTTTTCTATTACAGAGTTCATTTCCTTTCACTATCAAATATTAAAAAAAGAAAGAAGAAGAAAATAGCTGGGGGTATAATTGTATCTATGATTTTGTTTCTATTTACAGGCCGAGGAGATGGCTCAAACGTTCAGGCAAAGAATAGCCCAAGCAGAGGCAATGGCACGTGCAGACATGCTTAGGTTTCAGCCTGAGGTACTATACAGCCATCTATCCTTCAGATTTCTAAACCGTATCTTGAGAATGAAGAAAAAGTTAACGATAAATGCAAGTAAATAGTACATGCTGGAGTTCTAAACCATAACATGGAAAGTACTTCAGTTCCTGTTCCAAAAAAAAAGTACATTCTTTCTACTTTATTGGATACTTGATATTGTGGGATGAATGACCAATCATGCATTTATGGTAGTATAATTAAGTCTATGGTTTTAGAGAGATGTAGCACTGGCTGCATGACTGAGGATGTATTCTTTATTGGTTCAGCATCCTACATTGGCTTAAATTCTCTATATTAATCAGCTTGATAAACAATCTACATCAATGCTCATTCTTTTTGTGTGTCAATTAGAAAGACAATGATATAGAATTATTGAATAGAAAGGAATATTATTATTGATTAGGAAATGATAATAGGCTGTACTCAGTAGGATATTGTGTTGGATATTCTTATATTTTTGGGTTGATATCCTATTTATGAAGGTTTCTTAAGATATTGTGTTGGATACTTCTATAATTCAAAAGTGTATTAAGCATAACTTTTGAACTAATTAAAAGTATTTTTTTTATAAGAACTTACAAGCGTTTATAACTAACTAAAAAATACTTTCCATTTTAAGTACCATTAACTGCAGTTTAAAGTGCTTTTGGAAGAAACAATTGTTAATTTTTTTTTTTTAATTGAAAGTTCTTAAAGAAATAGTCATTCACAGGAAAGTAGTACTCTCTGATGTCATTCAAACACATTCCAAGTCCTCACTAAATGCCATCAGAAACGAACATTGAATTGATTATTCAGATATTGAATCTTGTTTTCAATCTTCTGTCGTCCTTTATTTCTCTCTGCAGTAGACTTTCTGTTGTTGAATTTGAATTCAAGTCGTGACTTGTTTTTTTAACCAAACAGAGTGGATTGACTTTGACCACCGATGGAATATTGGGACCAATTACCCCAGAGTTGCCAGTAGAAGGTTTAGATTTGAATGATATTCCTCCAGCTGAAGAATGAAGACTCAAAGTTTTCCCACTGTTGTATTCTGTACACTATTTCAATTTGTACACAGACGTCTGCCCTTGTAATTTGGTACGCAACTTAGCTCGGCATGTCATAGCTTAGTGTTGAATGCTTAATAAAAGCCTACTTGCCAGTTCATTTTCATTCTCTATTCTTTTGTTTCATTGGTTTCAGCATGGATAATGAACATGTGTTTGACCAACACTGCCACATTGCCAAGTTAAAAAATATTCCATGCTAGTTGAAGTTGGAAAGAATCTCTCTTAAGTTTTAGATATTGGTGAATGCTTTTTTTTTTTTTTTAATCTCAAACACCTCTGTTTCGATTTTTGTTTATGGCAAGCGAAGAGAGTTGATTAAAGCTTC

mRNA sequence

CTCCACTACCTTATCCAACCCAAAACCTCATCAGACTGTTTACAGAGTAGGAGCCTGTGAGGGAAGAAGGAAAATGGCTTCCATGGCTCAGCAATTCACTGGGCTGCGATGCGCGCCTCTTTCTTCTTCGCGTCTCTCGAAGCCATTTTCTTCGAGGCATTTGCAGAACAAGGCCCGTTCACTTCCCGTTCAAGCTGCAGTCATTTCGGGCCCCATTCCCAGTCCACAGACCAAGGAGCGTTTCAAGCTCAAGGAGGTCTTTGAAGATGCCTATGAACGCTGCCGTAACGCCCCTGTAGAAGGCATTTCCTTCACTCTCGAGGACTTCCATGCCGCTCTTGAGAAATACGACTTCGATTCTGAATTGGGAACGAAGGTGAAGGGTACTGTGTTCTGTACGGATGCTAATGGAGCACTTGTTGACATTACTGCCAAGTCATCTGCATACTTGCCAGTGCAGGAGGCTTGCATTCACAGAATAAAACATGTAGAAGAAGCAGGAATGTTTCCTGGTTTGAGAGAGGAGTTTGTTATTATTGGTGAGAATGAAGCTGATGATAGCTTGGTTTTGAGCTTGAGATCCATCCAATATGACCTGGCTTGGGAGAGGTGCAGGCAGCTTCAAGCAGAGGATGTTGTTGTCAAGGGCAAGGTGGTTGATGCAAACAAAGGTGGAGTTGTGGCAGTTGTGGAAGGTCTAAGAGGGTTTGTCCCTTTCTCACAGATATCGACGAAATCAACTGCTGAAGAGCTTCTCAACAAGGAGCTTCCTCTGAAGTTTGTGGAGGTTGATGAAGAACAATCGAGGCTTGTCCTTAGTAACCGTAAGGCCATGGCTGACAGCCAGGCACAGCTTGGAATTGGATCAGTGGTCACTGGGACGGTTCAAAGCCTTAAACCTTATGGTGCATTCATTGACATTGGTGGAATCAATGGTCTTCTTCATGTCAGTCAAATCAGTCATGATCGGATATCAGATATTGCAACAGTTCTTCAGCCTGGAGACACTCTCAAGGTCATGATATTGAGCCATGATCGTGAGAGAGGCCGAGTTAGTCTTTCTACCAAGAAGTTAGAGCCTACTCCTGGAGACATGATTCGAAATCCAAAGCTCGTCTTTGAGAAGGCCGAGGAGATGGCTCAAACGTTCAGGCAAAGAATAGCCCAAGCAGAGGCAATGGCACGTGCAGACATGCTTAGGTTTCAGCCTGAGAGTGGATTGACTTTGACCACCGATGGAATATTGGGACCAATTACCCCAGAGTTGCCAGTAGAAGGTTTAGATTTGAATGATATTCCTCCAGCTGAAGAATGAAGACTCAAAGTTTTCCCACTGTTGTATTCTGTACACTATTTCAATTTGTACACAGACGTCTGCCCTTGTAATTTGGTACGCAACTTAGCTCGGCATGTCATAGCTTAGTGTTGAATGCTTAATAAAAGCCTACTTGCCAGTTCATTTTCATTCTCTATTCTTTTGTTTCATTGGTTTCAGCATGGATAATGAACATGTGTTTGACCAACACTGCCACATTGCCAAGTTAAAAAATATTCCATGCTAGTTGAAGTTGGAAAGAATCTCTCTTAAGTTTTAGATATTGGTGAATGCTTTTTTTTTTTTTTTAATCTCAAACACCTCTGTTTCGATTTTTGTTTATGGCAAGCGAAGAGAGTTGATTAAAGCTTC

Coding sequence (CDS)

ATGGCTTCCATGGCTCAGCAATTCACTGGGCTGCGATGCGCGCCTCTTTCTTCTTCGCGTCTCTCGAAGCCATTTTCTTCGAGGCATTTGCAGAACAAGGCCCGTTCACTTCCCGTTCAAGCTGCAGTCATTTCGGGCCCCATTCCCAGTCCACAGACCAAGGAGCGTTTCAAGCTCAAGGAGGTCTTTGAAGATGCCTATGAACGCTGCCGTAACGCCCCTGTAGAAGGCATTTCCTTCACTCTCGAGGACTTCCATGCCGCTCTTGAGAAATACGACTTCGATTCTGAATTGGGAACGAAGGTGAAGGGTACTGTGTTCTGTACGGATGCTAATGGAGCACTTGTTGACATTACTGCCAAGTCATCTGCATACTTGCCAGTGCAGGAGGCTTGCATTCACAGAATAAAACATGTAGAAGAAGCAGGAATGTTTCCTGGTTTGAGAGAGGAGTTTGTTATTATTGGTGAGAATGAAGCTGATGATAGCTTGGTTTTGAGCTTGAGATCCATCCAATATGACCTGGCTTGGGAGAGGTGCAGGCAGCTTCAAGCAGAGGATGTTGTTGTCAAGGGCAAGGTGGTTGATGCAAACAAAGGTGGAGTTGTGGCAGTTGTGGAAGGTCTAAGAGGGTTTGTCCCTTTCTCACAGATATCGACGAAATCAACTGCTGAAGAGCTTCTCAACAAGGAGCTTCCTCTGAAGTTTGTGGAGGTTGATGAAGAACAATCGAGGCTTGTCCTTAGTAACCGTAAGGCCATGGCTGACAGCCAGGCACAGCTTGGAATTGGATCAGTGGTCACTGGGACGGTTCAAAGCCTTAAACCTTATGGTGCATTCATTGACATTGGTGGAATCAATGGTCTTCTTCATGTCAGTCAAATCAGTCATGATCGGATATCAGATATTGCAACAGTTCTTCAGCCTGGAGACACTCTCAAGGTCATGATATTGAGCCATGATCGTGAGAGAGGCCGAGTTAGTCTTTCTACCAAGAAGTTAGAGCCTACTCCTGGAGACATGATTCGAAATCCAAAGCTCGTCTTTGAGAAGGCCGAGGAGATGGCTCAAACGTTCAGGCAAAGAATAGCCCAAGCAGAGGCAATGGCACGTGCAGACATGCTTAGGTTTCAGCCTGAGAGTGGATTGACTTTGACCACCGATGGAATATTGGGACCAATTACCCCAGAGTTGCCAGTAGAAGGTTTAGATTTGAATGATATTCCTCCAGCTGAAGAATGA

Protein sequence

MASMAQQFTGLRCAPLSSSRLSKPFSSRHLQNKARSLPVQAAVISGPIPSPQTKERFKLKEVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDANGALVDITAKSSAYLPVQEACIHRIKHVEEAGMFPGLREEFVIIGENEADDSLVLSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDIPPAEE

Homology

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BLAST of Tan0019317 vs. ExPASy Swiss-Prot
Match: P29344 (30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS1 PE=1 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 2.3e-192
Identity = 345/414 (83.33%), Postives = 384/414 (92.75%), Query Frame = 0


Query: 1   MASMAQQFT-GLRCAPLSSSRLSKPFSSRHLQNKARSLPVQAAVISGPIPSPQTKERFKL 60
           MAS+AQQ   GLRC PLS+S LSKPFS +H   K R  P+ +AV    + + QT+ER KL
Sbjct: 1   MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTL-KPRFSPIVSAV---AVSNAQTRERQKL 60

Query: 61  KEVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDANGALVDIT 120
           K++FEDAYERCRNAP+EG+SFT++DFH AL+KYDF+SE+G++VKGTVFCTDANGALVDIT
Sbjct: 61  KQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDIT 120

Query: 121 AKSSAYLPVQEACIHRIKHVEEAGMFPGLREEFVIIGENEADDSLVLSLRSIQYDLAWER 180
           AKSSAYLP+ EACI+RIK+VEEAG+ PG+REEFVIIGENEADDSL+LSLR IQY+LAWER
Sbjct: 121 AKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWER 180

Query: 181 CRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEV 240
           CRQLQAEDVVVKGK+V ANKGGVVA+VEGLRGFVPFSQIS+KS+AEELL KE+PLKFVEV
Sbjct: 181 CRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEV 240

Query: 241 DEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDR 300
           DEEQSRLV+SNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDR
Sbjct: 241 DEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDR 300

Query: 301 ISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF 360
           +SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF
Sbjct: 301 VSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF 360

Query: 361 RQRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDIPPAEE 414
           RQRIAQAEAMARADMLRFQPESGLTL++DGILGP+T +LP EGLDL+ +PPA E
Sbjct: 361 RQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVE 410

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BLAST of Tan0019317 vs. ExPASy Swiss-Prot
Match: Q93VC7 (30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 PE=1 SV=1)

HSP 1 Score: 634.8 bits (1636), Expect = 6.8e-181
Identity = 329/415 (79.28%), Postives = 379/415 (91.33%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPL-SSSRLSKPFSSRHLQNKARSL-PVQAAVISGPIPSPQTKERFK 60
           MAS+AQQF+GLRC+PL SSSRLS+  S    QNK+ S+ P   A ++  + S QTKER +
Sbjct: 1   MASLAQQFSGLRCSPLSSSSRLSRRASKNFPQNKSASVSPTIVAAVA--MSSGQTKERLE 60

Query: 61  LKEVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDANGALVDI 120
           LK++FEDAYERCR +P+EG++FT++DF AA+E+YDF+SE+GT+VKGTVF TDANGALVDI
Sbjct: 61  LKKMFEDAYERCRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVDI 120

Query: 121 TAKSSAYLPVQEACIHRIKHVEEAGMFPGLREEFVIIGENEADDSLVLSLRSIQYDLAWE 180
           +AKSSAYL V++ACIHRIKHVEEAG+ PG+ EEFVIIGENE+DDSL+LSLR+IQY+LAWE
Sbjct: 121 SAKSSAYLSVEQACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLLLSLRNIQYELAWE 180

Query: 181 RCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVE 240
           RCRQLQAEDV+VK KV+ ANKGG+VA+VEGLRGFVPFSQIS+K+ AEELL KE+PLKFVE
Sbjct: 181 RCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEELLEKEIPLKFVE 240

Query: 241 VDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHD 300
           VDEEQ++LVLSNRKA+ADSQAQLGIGSVV G VQSLKPYGAFIDIGGINGLLHVSQISHD
Sbjct: 241 VDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAFIDIGGINGLLHVSQISHD 300

Query: 301 RISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT 360
           R+SDIATVLQPGDTLKVMILSHDR+RGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT
Sbjct: 301 RVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT 360

Query: 361 FRQRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDL--NDIPPA 412
           FRQRIAQAEAMARADMLRFQPESGLTL++DGILGP+  ELP +G+DL  +DIP A
Sbjct: 361 FRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSELPDDGVDLTVDDIPSA 413

[Close]

BLAST of Tan0019317 vs. ExPASy Swiss-Prot
Match: P46228 (30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rpsA PE=1 SV=4)

HSP 1 Score: 304.3 bits (778), Expect = 2.1e-81
Identity = 155/296 (52.36%), Postives = 213/296 (71.96%), Query Frame = 0


Query: 71  RNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDANGALVDITAKSSAYLPVQE 130
           ++ P   I FT EDF A L++YD+    G  V GTVF  +  GAL+DI AK++A+LPVQE
Sbjct: 4   QDIPAVDIGFTHEDFAALLDQYDYHFNPGDTVVGTVFNLEPRGALIDIGAKTAAFLPVQE 63

Query: 131 ACIHRIKHVEEAGMFPGLREEFVIIGENEADDSLVLSLRSIQYDLAWERCRQLQAEDVVV 190
             I+R++  EE      +RE F++  ENE D  L LS+R I+Y  AWER RQLQ ED  V
Sbjct: 64  MSINRVESPEEVLQPSEMREFFILSDENE-DGQLTLSIRRIEYMRAWERVRQLQTEDATV 123

Query: 191 KGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSN 250
           + +V   N+GG +  +EGLRGF+P S IST+   E+L+ +ELPLKF+EVDE+++RLVLS+
Sbjct: 124 RSEVFATNRGGALVRIEGLRGFIPGSHISTRKAKEDLVGEELPLKFLEVDEDRNRLVLSH 183

Query: 251 RKAMADSQA-QLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQP 310
           R+A+ + +  +L +G VV G V+ +KPYGAFIDIGG++GLLH+S+ISHD I    +V   
Sbjct: 184 RRALVERKMNRLEVGEVVVGAVRGIKPYGAFIDIGGVSGLLHISEISHDHIETPHSVFNV 243

Query: 311 GDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQ 366
            D +KVMI+  D ERGR+SLSTK+LEP PGDM+RNP++V+EKAEEMA  +R+++ Q
Sbjct: 244 NDEVKVMIIDLDAERGRISLSTKQLEPEPGDMVRNPEVVYEKAEEMAAQYREKLKQ 298

[Close]

BLAST of Tan0019317 vs. ExPASy Swiss-Prot
Match: P73530 (30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rps1A PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.8e-77
Identity = 155/312 (49.68%), Postives = 213/312 (68.27%), Query Frame = 0


Query: 78  ISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDANGALVDITAKSSAYLPVQEACIHRIK 137
           I FTLEDF A L+KYD+    G  V GTVF  ++ GAL+DI AK++AY+P+QE  I+R+ 
Sbjct: 10  IGFTLEDFAALLDKYDYHFSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMSINRVD 69

Query: 138 HVEEAGMFPGLREEFVIIGENEADDSLVLSLRSIQYDLAWERCRQLQAEDVVVKGKVVDA 197
             EE       RE F++  ENE D  L LS+R I+Y  AWER RQLQAED  V+  V   
Sbjct: 70  DPEEVLQPNETREFFILTDENE-DGQLTLSIRRIEYMRAWERVRQLQAEDATVRSNVFAT 129

Query: 198 NKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADS 257
           N+GG +  +EGLRGF+P S IS +   E+L+ ++LPLKF+EVDEE++RLVLS+R+A+ + 
Sbjct: 130 NRGGALVRIEGLRGFIPGSHISAREAKEDLVGEDLPLKFLEVDEERNRLVLSHRRALVER 189

Query: 258 QAQ-LGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVM 317
           +   L +  VV G+V+ +KPYGAFIDIGG++GLLH+S+ISHD I    +V    D +KVM
Sbjct: 190 KMNGLEVAQVVVGSVRGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDEIKVM 249

Query: 318 ILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLR 377
           I+  D ERGR+SLSTK+LEP PG M+++  LV E A+EMA+ FRQ+      +A A  + 
Sbjct: 250 IIDLDAERGRISLSTKQLEPEPGAMLKDRDLVNEMADEMAEIFRQK-----RLAEAQGIP 309

Query: 378 FQPESGLTLTTD 389
           ++P + +  T D
Sbjct: 310 YEPPTSVDDTDD 315

[Close]

BLAST of Tan0019317 vs. ExPASy Swiss-Prot
Match: O33698 (30S ribosomal protein S1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rpsA PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-45
Identity = 100/282 (35.46%), Postives = 166/282 (58.87%), Query Frame = 0


Query: 83  EDFHAALEKYDFDSELGTKVKGTVFCTDANGALVDITAKSSAYLPVQEACIHRIKHVEEA 142
           +DF  ALE    DS+ G  V+G V     +GA +DI  K+ A+LP +EA +H +  + EA
Sbjct: 12  DDFALALEAQSLDSQKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDL-EA 71

Query: 143 GMFPGLREEFVIIGENEADDSLVLSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGV 202
            +      EF++I +   D  + +SLR++  + AW R  +LQ     V+ KV  +NKGGV
Sbjct: 72  HLPKDEELEFLVIRDQNEDGQVTVSLRALALEQAWTRVAELQEGGQTVQVKVTGSNKGGV 131

Query: 203 VAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQA-QL 262
            A +EGLR F+P S ++ K   + L  K L + F+EV+    +LVLS R+A   +   ++
Sbjct: 132 TADLEGLRAFIPRSHLNEKEDLDSLKGKTLTVAFLEVNRADKKLVLSERQAARTALVREI 191

Query: 263 GIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHD 322
            +G ++ G V  LKP+G F+D+GG   LL ++QIS   ++D+  + + GD ++ ++++ D
Sbjct: 192 EVGQLINGKVTGLKPFGVFVDLGGATALLPINQISQKFVADVGAIFKIGDPIQALVVAID 251

Query: 323 RERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 364
             +GR+SLSTK LE  PG+++ N   +   A + A+  R+++
Sbjct: 252 NTKGRISLSTKVLENHPGEILENVAELQASAADRAERARKQL 292

[Close]

BLAST of Tan0019317 vs. NCBI nr
Match: XP_038878013.1 (30S ribosomal protein S1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 786.6 bits (2030), Expect = 1.1e-223
Identity = 403/413 (97.58%), Postives = 410/413 (99.27%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSRHLQNKARSLPVQAAVISGPIPSPQTKERFKLK 60
           MASMAQQFTGLRC PLSSSRLSKPFSSRHLQ+KARSLPVQAAVISGPIPSPQTKERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSRHLQSKARSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDANGALVDITA 120
           EVFE+AYERCRNAPVEGI+FTLEDFHAALEKYDFDSELGTKVKGTVFCTD NGALVDITA
Sbjct: 61  EVFEEAYERCRNAPVEGIAFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120

Query: 121 KSSAYLPVQEACIHRIKHVEEAGMFPGLREEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLPVQEACIHRIKHVEEAG+FPGLREEFVIIGENEADDSL+LSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENEADDSLILSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQIS+KSTAEELLNKELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISSKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDI TVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIGTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDIPPAEE 414
           QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLND+PPAEE
Sbjct: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Tan0019317 vs. NCBI nr
Match: XP_022138241.1 (30S ribosomal protein S1, chloroplastic [Momordica charantia])

HSP 1 Score: 784.6 bits (2025), Expect = 4.1e-223
Identity = 403/413 (97.58%), Postives = 409/413 (99.03%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSRHLQNKARSLPVQAAVISGPIPSPQTKERFKLK 60
           MASMAQQFTGLRCAPLSSSRLS PFS RHLQNKARSLPV AAVIS PIPSPQTKERFKLK
Sbjct: 1   MASMAQQFTGLRCAPLSSSRLSTPFSPRHLQNKARSLPVHAAVISSPIPSPQTKERFKLK 60

Query: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDANGALVDITA 120
           EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSE+GTKVKGTVFCTDANGALVDITA
Sbjct: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGTKVKGTVFCTDANGALVDITA 120

Query: 121 KSSAYLPVQEACIHRIKHVEEAGMFPGLREEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLPVQEACIHRIKHVEEAG+FPG+REEFVIIGENEADDSLVLSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPVQEACIHRIKHVEEAGIFPGVREEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQIS+KSTAEELLNKELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISSKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDIPPAEE 414
           QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDL+D+PPAEE
Sbjct: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLSDVPPAEE 413

[Close]

BLAST of Tan0019317 vs. NCBI nr
Match: XP_008438974.1 (PREDICTED: 30S ribosomal protein S1, chloroplastic [Cucumis melo])

HSP 1 Score: 784.3 bits (2024), Expect = 5.3e-223
Identity = 401/413 (97.09%), Postives = 410/413 (99.27%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSRHLQNKARSLPVQAAVISGPIPSPQTKERFKLK 60
           MASMAQQFTGLRC PLSSSRLSKPFSS+HL NK+RSLPVQAAVISGPIPSPQTKERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDANGALVDITA 120
           EVFE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTD NGALVDITA
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120

Query: 121 KSSAYLPVQEACIHRIKHVEEAGMFPGLREEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLP+QEACIHRIKHVEEAG+FPGLREEFVIIGENE+DDSL+LSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDIPPAEE 414
           QRIAQAEA+ARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLND+PPAEE
Sbjct: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Tan0019317 vs. NCBI nr
Match: XP_004147619.1 (30S ribosomal protein S1, chloroplastic [Cucumis sativus] >KAE8650407.1 hypothetical protein Csa_009967 [Cucumis sativus])

HSP 1 Score: 777.7 bits (2007), Expect = 5.0e-221
Identity = 397/413 (96.13%), Postives = 409/413 (99.03%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSRHLQNKARSLPVQAAVISGPIPSPQTKERFKLK 60
           MASMAQQFTGLRCAPLSSSRLSKPFSS+H  NK+RSLPVQAAVISGPIPSPQT+ERFKLK
Sbjct: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60

Query: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDANGALVDITA 120
           EVFE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTD NGALVDITA
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120

Query: 121 KSSAYLPVQEACIHRIKHVEEAGMFPGLREEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLP+QEACIHRIKHVEEAG+FPGLREEFVIIGENE+DDSL+LSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKS AEELL+KELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDIPPAEE 414
           QRIAQAEA+ARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLND+PPAEE
Sbjct: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Tan0019317 vs. NCBI nr
Match: KAA0052175.1 (30S ribosomal protein S1 [Cucumis melo var. makuwa] >TYK05147.1 30S ribosomal protein S1 [Cucumis melo var. makuwa])

HSP 1 Score: 770.4 bits (1988), Expect = 7.9e-219
Identity = 401/438 (91.55%), Postives = 410/438 (93.61%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSRHLQNKARSLPVQAAVISGPIPSPQTKERFKLK 60
           MASMAQQFTGLRC PLSSSRLSKPFSS+HL NK+RSLPVQAAVISGPIPSPQTKERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTK------------------- 120
           EVFE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTK                   
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVISGFSFFFFFFFQFCIFV 120

Query: 121 ------VKGTVFCTDANGALVDITAKSSAYLPVQEACIHRIKHVEEAGMFPGLREEFVII 180
                 VKGTVFCTD NGALVDITAKSSAYLP+QEACIHRIKHVEEAG+FPGLREEFVII
Sbjct: 121 GAVSFQVKGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAGIFPGLREEFVII 180

Query: 181 GENEADDSLVLSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF 240
           GENE+DDSL+LSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF
Sbjct: 181 GENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF 240

Query: 241 SQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK 300
           SQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK
Sbjct: 241 SQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK 300

Query: 301 PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLE 360
           PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLE
Sbjct: 301 PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLE 360

Query: 361 PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLTTDGILGPIT 414
           PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEA+ARADMLRFQPESGLTLTTDGILGPIT
Sbjct: 361 PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPIT 420

[Close]

BLAST of Tan0019317 vs. ExPASy TrEMBL
Match: A0A6J1C966 (30S ribosomal protein S1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009464 PE=4 SV=1)

HSP 1 Score: 784.6 bits (2025), Expect = 2.0e-223
Identity = 403/413 (97.58%), Postives = 409/413 (99.03%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSRHLQNKARSLPVQAAVISGPIPSPQTKERFKLK 60
           MASMAQQFTGLRCAPLSSSRLS PFS RHLQNKARSLPV AAVIS PIPSPQTKERFKLK
Sbjct: 1   MASMAQQFTGLRCAPLSSSRLSTPFSPRHLQNKARSLPVHAAVISSPIPSPQTKERFKLK 60

Query: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDANGALVDITA 120
           EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSE+GTKVKGTVFCTDANGALVDITA
Sbjct: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGTKVKGTVFCTDANGALVDITA 120

Query: 121 KSSAYLPVQEACIHRIKHVEEAGMFPGLREEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLPVQEACIHRIKHVEEAG+FPG+REEFVIIGENEADDSLVLSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPVQEACIHRIKHVEEAGIFPGVREEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQIS+KSTAEELLNKELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISSKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDIPPAEE 414
           QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDL+D+PPAEE
Sbjct: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLSDVPPAEE 413

[Close]

BLAST of Tan0019317 vs. ExPASy TrEMBL
Match: A0A1S3AXL6 (30S ribosomal protein S1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483907 PE=4 SV=1)

HSP 1 Score: 784.3 bits (2024), Expect = 2.6e-223
Identity = 401/413 (97.09%), Postives = 410/413 (99.27%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSRHLQNKARSLPVQAAVISGPIPSPQTKERFKLK 60
           MASMAQQFTGLRC PLSSSRLSKPFSS+HL NK+RSLPVQAAVISGPIPSPQTKERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDANGALVDITA 120
           EVFE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTD NGALVDITA
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120

Query: 121 KSSAYLPVQEACIHRIKHVEEAGMFPGLREEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLP+QEACIHRIKHVEEAG+FPGLREEFVIIGENE+DDSL+LSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDIPPAEE 414
           QRIAQAEA+ARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLND+PPAEE
Sbjct: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Tan0019317 vs. ExPASy TrEMBL
Match: A0A5A7UEP7 (30S ribosomal protein S1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00520 PE=4 SV=1)

HSP 1 Score: 770.4 bits (1988), Expect = 3.8e-219
Identity = 401/438 (91.55%), Postives = 410/438 (93.61%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSRHLQNKARSLPVQAAVISGPIPSPQTKERFKLK 60
           MASMAQQFTGLRC PLSSSRLSKPFSS+HL NK+RSLPVQAAVISGPIPSPQTKERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTK------------------- 120
           EVFE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTK                   
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVISGFSFFFFFFFQFCIFV 120

Query: 121 ------VKGTVFCTDANGALVDITAKSSAYLPVQEACIHRIKHVEEAGMFPGLREEFVII 180
                 VKGTVFCTD NGALVDITAKSSAYLP+QEACIHRIKHVEEAG+FPGLREEFVII
Sbjct: 121 GAVSFQVKGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAGIFPGLREEFVII 180

Query: 181 GENEADDSLVLSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF 240
           GENE+DDSL+LSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF
Sbjct: 181 GENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF 240

Query: 241 SQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK 300
           SQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK
Sbjct: 241 SQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK 300

Query: 301 PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLE 360
           PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLE
Sbjct: 301 PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLE 360

Query: 361 PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLTTDGILGPIT 414
           PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEA+ARADMLRFQPESGLTLTTDGILGPIT
Sbjct: 361 PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPIT 420

[Close]

BLAST of Tan0019317 vs. ExPASy TrEMBL
Match: A0A6J1F6H4 (30S ribosomal protein S1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111442576 PE=4 SV=1)

HSP 1 Score: 765.8 bits (1976), Expect = 9.4e-218
Identity = 388/413 (93.95%), Postives = 407/413 (98.55%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSRHLQNKARSLPVQAAVISGPIPSPQTKERFKLK 60
           MASMAQQF GLRCAPLSSSRLSKPFSSRHLQN+ARSLPVQAAVI+ PIPSPQ KERFKLK
Sbjct: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60

Query: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDANGALVDITA 120
           E+FE+AYERCRNAPVEGISFT+EDFH+A+EKYDF+SE+GTKVKGTVFCTDANGALVDITA
Sbjct: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA 120

Query: 121 KSSAYLPVQEACIHRIKHVEEAGMFPGLREEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLP+QEACIHRIKHVEEAG++PGLR+EFVIIGENEADDSLVLSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELL KE+PLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKA+ADSQAQLGIGSVV GTVQSLKPYGAFIDIGG+NGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDIPPAEE 414
           QRIA AEAMARADML+FQPESGLTLTTDGILGP+TPELPVEGLDLND+PPAEE
Sbjct: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Tan0019317 vs. ExPASy TrEMBL
Match: A0A6J1IAT2 (30S ribosomal protein S1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470801 PE=4 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 1.4e-216
Identity = 386/413 (93.46%), Postives = 406/413 (98.31%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSRHLQNKARSLPVQAAVISGPIPSPQTKERFKLK 60
           MASMAQQF GLRCAPLSSSRLSKPFSSRHLQN+ARSLPVQAAVI+ PIPSP  KERFKLK
Sbjct: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPLVKERFKLK 60

Query: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDANGALVDITA 120
           E+FE+AYERCRNAPVEGISFT+EDFH+A+EKYDF+SE+GTKVKGTVFCTD+NGALVDITA
Sbjct: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDSNGALVDITA 120

Query: 121 KSSAYLPVQEACIHRIKHVEEAGMFPGLREEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLP+QEACIHRIKHVEEAG++PGLR+EFVIIGENEADDSLVLSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELL KE+PLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKA+ADSQAQLGIGSVV GTVQSLKPYGAFIDIGG+NGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDIPPAEE 414
           QRIA AEAMARADML+FQPESGLTLTTDGILGP+TPELPVEGLDLND+PPAEE
Sbjct: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Tan0019317 vs. TAIR 10
Match: AT5G30510.1 (ribosomal protein S1 )

HSP 1 Score: 634.8 bits (1636), Expect = 4.8e-182
Identity = 329/415 (79.28%), Postives = 379/415 (91.33%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPL-SSSRLSKPFSSRHLQNKARSL-PVQAAVISGPIPSPQTKERFK 60
           MAS+AQQF+GLRC+PL SSSRLS+  S    QNK+ S+ P   A ++  + S QTKER +
Sbjct: 1   MASLAQQFSGLRCSPLSSSSRLSRRASKNFPQNKSASVSPTIVAAVA--MSSGQTKERLE 60

Query: 61  LKEVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDANGALVDI 120
           LK++FEDAYERCR +P+EG++FT++DF AA+E+YDF+SE+GT+VKGTVF TDANGALVDI
Sbjct: 61  LKKMFEDAYERCRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVDI 120

Query: 121 TAKSSAYLPVQEACIHRIKHVEEAGMFPGLREEFVIIGENEADDSLVLSLRSIQYDLAWE 180
           +AKSSAYL V++ACIHRIKHVEEAG+ PG+ EEFVIIGENE+DDSL+LSLR+IQY+LAWE
Sbjct: 121 SAKSSAYLSVEQACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLLLSLRNIQYELAWE 180

Query: 181 RCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVE 240
           RCRQLQAEDV+VK KV+ ANKGG+VA+VEGLRGFVPFSQIS+K+ AEELL KE+PLKFVE
Sbjct: 181 RCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEELLEKEIPLKFVE 240

Query: 241 VDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHD 300
           VDEEQ++LVLSNRKA+ADSQAQLGIGSVV G VQSLKPYGAFIDIGGINGLLHVSQISHD
Sbjct: 241 VDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAFIDIGGINGLLHVSQISHD 300

Query: 301 RISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT 360
           R+SDIATVLQPGDTLKVMILSHDR+RGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT
Sbjct: 301 RVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT 360

Query: 361 FRQRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDL--NDIPPA 412
           FRQRIAQAEAMARADMLRFQPESGLTL++DGILGP+  ELP +G+DL  +DIP A
Sbjct: 361 FRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSELPDDGVDLTVDDIPSA 413

[Close]

BLAST of Tan0019317 vs. TAIR 10
Match: AT1G71720.1 (Nucleic acid-binding proteins superfamily )

HSP 1 Score: 104.4 bits (259), Expect = 2.3e-22
Identity = 64/205 (31.22%), Postives = 122/205 (59.51%), Query Frame = 0


Query: 165 VLSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVP----FSQIST 224
           +LS R     +AW R RQ++  +  ++ K+ + N GG++  +EGLR F+P      +++T
Sbjct: 261 LLSSRRYFRRIAWHRVRQIKQLNEPIEVKITEWNTGGLLTRIEGLRAFIPKQELVKKVNT 320

Query: 225 KSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAF 284
            +  +E + +   ++   ++E+++ L+LS +  +A  +  L  G+++ GTV  + PYGA 
Sbjct: 321 FTELKENVGRRFLVQITRLNEDKNDLILSEK--VAWEKLYLREGTLLEGTVVKILPYGAQ 380

Query: 285 IDIG--GINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 344
           + +G    +GLLH+S I+  RI  ++ VLQ  +++KV+++       ++SLS   LE  P
Sbjct: 381 VKLGDSSRSGLLHISNITRRRIGSVSDVLQVDESVKVLVVK-SLFPDKISLSIADLESEP 440

Query: 345 GDMIRNPKLVFEKAEEMAQTFRQRI 364
           G  I + + VF +AEEMA+ +R+++
Sbjct: 441 GLFISDREKVFTEAEEMAKKYREKM 462

[Close]

BLAST of Tan0019317 vs. TAIR 10
Match: AT3G23700.1 (Nucleic acid-binding proteins superfamily )

HSP 1 Score: 100.5 bits (249), Expect = 3.3e-21
Identity = 58/180 (32.22%), Postives = 100/180 (55.56%), Query Frame = 0


Query: 177 WERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEE---------- 236
           W+  +         +G+V   N GG++     L GF+P+ Q+S   + +E          
Sbjct: 97  WKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLVGFLPYPQLSPSRSCKEPQKSIHEIAK 156

Query: 237 -LLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQ-LGIGSVVTGTVQSLKPYGAFIDIG 296
            L+  +LP+K V+ DEE  +L+LS + A+    +Q + +G V  G V S++ YGAFI + 
Sbjct: 157 TLVGSKLPVKVVQADEENRKLILSEKLALWPKYSQNVNVGDVFNGRVGSVEDYGAFIHLR 216

Query: 297 ------GINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 339
                  + GL+HVS++S D + D+  VL+ GD ++V++ + D+E+ R++LS K+LE  P
Sbjct: 217 FDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQLEDDP 276

[Close]

BLAST of Tan0019317 vs. TAIR 10
Match: AT5G14580.1 (polyribonucleotide nucleotidyltransferase, putative )

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-11
Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 237 VEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVTGTVQSLKPYGAFIDI-GGIN 296
           + +D     +V  N+  M  +Q Q        L +G V  GTV S+K YGAF++  GG  
Sbjct: 643 LSIDNGTLTIVAKNQDVMEKAQEQVDFIIGRELVVGGVYKGTVSSIKEYGAFVEFPGGQQ 702

Query: 297 GLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 339
           GLLH+S++SH+ +S ++ VL  G  +  M +  D  RG + LS K L P P
Sbjct: 703 GLLHMSELSHEPVSKVSDVLDIGQCITTMCIETD-VRGNIKLSRKALLPKP 752

[Close]

BLAST of Tan0019317 vs. TAIR 10
Match: AT3G11964.1 (RNA binding;RNA binding )

HSP 1 Score: 62.4 bits (150), Expect = 9.9e-10
Identity = 44/153 (28.76%), Postives = 77/153 (50.33%), Query Frame = 0


Query: 260  QLGIGSVVTGTVQSLKPYGAFIDIG--GINGLLHVSQISHDRISDIATVLQPGDTLKVMI 319
            +L +G +++G ++ ++P+G FIDI   G+ GL H+SQ+S DR+ ++    + G++++  I
Sbjct: 1431 KLHVGDMISGRIRRVEPFGLFIDIDQTGMVGLCHISQLSDDRMENVQARYKAGESVRAKI 1490

Query: 320  LSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRF 379
            L  D E+ R+SL  K      GD  +   L  +              ++E +A  D   F
Sbjct: 1491 LKLDEEKKRISLGMKSSYLMNGDDDKAQPLSEDNTSMECDPIND--PKSEVLAAVDDFGF 1550

Query: 380  QPESGLTLTTDGILGPI--TPELPVEGLDLNDI 409
            Q  SG    T  +L  +     +P   +DL+DI
Sbjct: 1551 QETSG---GTSLVLAQVESRASIPPLEVDLDDI 1578

The following BLAST results are available for this feature:

BLAST of Tan0019317 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29344	2.3e-192	83.33	30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS1 PE=...	[more]
Q93VC7	6.8e-181	79.28	30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 ...	[more]
P46228	2.1e-81	52.36	30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SA...	[more]
P73530	1.8e-77	49.68	30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazus...	[more]
O33698	1.1e-45	35.46	30S ribosomal protein S1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805...	[more]

BLAST of Tan0019317 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878013.1	1.1e-223	97.58	30S ribosomal protein S1, chloroplastic-like [Benincasa hispida]	[more]
XP_022138241.1	4.1e-223	97.58	30S ribosomal protein S1, chloroplastic [Momordica charantia]	[more]
XP_008438974.1	5.3e-223	97.09	PREDICTED: 30S ribosomal protein S1, chloroplastic [Cucumis melo]	[more]
XP_004147619.1	5.0e-221	96.13	30S ribosomal protein S1, chloroplastic [Cucumis sativus] >KAE8650407.1 hypothet...	[more]
KAA0052175.1	7.9e-219	91.55	30S ribosomal protein S1 [Cucumis melo var. makuwa] >TYK05147.1 30S ribosomal pr...	[more]

BLAST of Tan0019317 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C966	2.0e-223	97.58	30S ribosomal protein S1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A1S3AXL6	2.6e-223	97.09	30S ribosomal protein S1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483907 ...	[more]
A0A5A7UEP7	3.8e-219	91.55	30S ribosomal protein S1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1F6H4	9.4e-218	93.95	30S ribosomal protein S1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1IAT2	1.4e-216	93.46	30S ribosomal protein S1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470...	[more]

BLAST of Tan0019317 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G30510.1	4.8e-182	79.28	ribosomal protein S1	[more]
AT1G71720.1	2.3e-22	31.22	Nucleic acid-binding proteins superfamily	[more]
AT3G23700.1	3.3e-21	32.22	Nucleic acid-binding proteins superfamily	[more]
AT5G14580.1	1.1e-11	36.94	polyribonucleotide nucleotidyltransferase, putative	[more]
AT3G11964.1	9.9e-10	28.76	RNA binding;RNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 349..369
None	No IPR available	GENE3D	2.40.50.140		coord: 258..336 e-value: 2.3E-23 score: 83.9
None	No IPR available	GENE3D	2.40.50.140		coord: 82..179 e-value: 1.2E-8 score: 36.6
None	No IPR available	GENE3D	2.40.50.140		coord: 180..257 e-value: 1.1E-7 score: 33.9
None	No IPR available	PANTHER	PTHR10724	30S RIBOSOMAL PROTEIN S1	coord: 1..413
None	No IPR available	PANTHER	PTHR10724:SF11	30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC	coord: 1..413
None	No IPR available	CDD	cd05692	S1_RPS1_repeat_hs4	coord: 264..332 e-value: 3.78191E-32 score: 114.305
None	No IPR available	CDD	cd05687	S1_RPS1_repeat_ec1_hs1	coord: 99..169 e-value: 2.17787E-12 score: 60.2355
None	No IPR available	CDD	cd04465	S1_RPS1_repeat_ec2_hs2	coord: 198..251 e-value: 1.60629E-17 score: 74.4175
IPR035104	Ribosomal protein S1-like	PRINTS	PR00681	RIBOSOMALS1	coord: 117..131 score: 32.38 coord: 208..225 score: 33.33 coord: 99..117 score: 37.59 coord: 190..206 score: 33.61
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 185..251 e-value: 1.9E-7 score: 40.7 coord: 262..332 e-value: 1.3E-25 score: 101.1 coord: 97..169 e-value: 4.8E-5 score: 32.8
IPR003029	S1 domain	PFAM	PF00575	S1	coord: 263..332 e-value: 2.4E-18 score: 66.2 coord: 185..249 e-value: 4.4E-8 score: 33.4
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 264..332 score: 22.315994
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 99..169 score: 12.304119
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 187..251 score: 14.643972
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 94..195
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 263..342
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 182..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0019317.1	Tan0019317.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003676	nucleic acid binding