Tan0019314 (gene) Snake gourd v1

Overview


Name	Tan0019314
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	replication factor C subunit 4
Location	LG01: 105531960 .. 105536794 (+)
RNA-Seq Expression	Tan0019314
Synteny	Tan0019314

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGAAAAGAAAAACAAAAACCCTATTATCGGTGCAGGGAAGGTGGACCAGTGGCTGTAGAGGGAAAGAAATGGCGCCATTGTTGCAGAGCTCTCAACCATGGGTGGAGAAATAGTACGTTCCCTTTCCCTTTCCTTTTCTTTCATTTCACTCAATTCTTTAGAATGTGTTGCGTAATCTCAACCATCGCCTATTTTCTCCAATGACAGTCGACCGAAGCAAGTGAAAGATGTGGCGCATCAGGATGAAGTGGTTCGGGTCCTCACCAACACCCTCGAGACTGCCAGTGTACTTATTATGAACTTCTTTTTTTGATTATGGTGGTGATTGTATTTCTCTTTTCAACAGTGTTTTTTTTTAAAATCTTCGATTGTTGGTTGAACAGTGTCCTCACATGCTCTTCTATGGACCGCCTGGTACCGGAAAAACCACCACCGCTCTCGCGATTGCCCATCAACTATTCGGGTTCGTATCTGCCCCTATCTGTTGTTATATTTCTGCTTCTTCTGTTGCTAATGATTTTGAGGAAGTTGTGAATTTGTGTTTGGTAGTTCAGAATCCCTTCTAAGGAATATATTTGATTTTATGCAGCTGGGGAATTAGGTTTCTTATCCTTGTTTGTAATTTTTTGGTTAAGATTTTCTCTGAATTATCCATCTATGAGCCTTTTCAACGAATGGAAGTTGAAACATGAAACTATAAAAAATCATGGCCTCGCTATGGTTATGATTAAATGCTAGTTATCAAGATTTCGGGTGGTTTTTGCTCAAAGCGTTTGTAATTCAAATGCTCAAACAATTGCTTTTGCTGTATAAAATATGAAATGGACTATTTTAATTTCTTTCAAGTTTGTTGTTGGATATAAAAAATATCTGATGTGAAAAATATTATTTGTAGTCCTGAACTTTACAAGTCCAGAGTTTTGGAATTGAATGCAAGTGATGACCGTGGGATCAATGTTGTTCGGACTAAGATTAAAGATTTTGCTGGTGTTGCAGTAAGCAGTGGCCAACGCCAAGGGTAATCTTCTTAATCTTAGCTATAACATTTTCATAATAGTCCTGTTATTTCACACTTTTTTTTTTAAAAAAAAAAACTAGGGGTTATCCTTGCCCACCATTCAAGATAATCATTCTGGATGAGGCTGATTCAATGACTGAAGATGCTCAGGTGTGATCACAGTCTAGATACATTCTATCTGCTTTATTGTAGTTACTATGAGTTTAGTTTTTTTTCCCCCTAATATTGAACATTATGTAGAATGCCCTGAGGCGTACCATGGAAACACACTCCAAAGTAACACGATTCTTTTTTATATGCAACTATATTAGCAGGTGAAGCTTCACTTCCTTTTGTAGTGTTTTAATTTCTCTATTTATTATTGTAGATTTTTCTTTCTAGATTTTTCTTTTTGATGTTCATGACAGTCTTCTATTTATTGTTGTTTATTTTGTTTTTGGATTCGTACTTTTGATATTTATGACAGAGCATTAGGAGAGTCGGTGGTAATTTATGGAGTAAATTAATAATTATAGCTCATAAGATGTTTTCATTTATTAGCCACTTATGAAAGAGCATTGGGAGAGTTGGTGGAAATTTGCTTCGGGTAAAATCATTGAGGGAGAGAGAAAGAGGGTATGAGGCTCAAATCTCTGAGAACAATTGCAGATGGCTATAATTTTTCTTTAAAAAAAAAATTGTAGATGACCATAATAGTTTTTAACTAGATTGCAATTTAATTGTTTTAAACATTAAATTCATGAGCAGTACGGGAATCGAATATTTGAAACCAATTGTGGATGAGCAGGAGCACGATAATATTGAACCCTTTGCTACTTTCTGTTCATGAAACTTTGACATTCTCAATATTATATATTCTTTTATGAAGGCATGCAGATTAATGTATATATTTTTGCAGCATCTGTTCAATGTACAAAAACGTTATACCTATTTGTCTTGTGCATTCTATATAGTTCCCCATTGAATTGTTAGAATACTGGAAACTGATTTCTTTATTGTTCATGATTTTCACCATGGTCTATTTTTACTTGGTCTTGAGATGAGTGCTAGTGTGGGGAAGCTAAACTGTCATCTCAGTGTTTTTTTCCATCTCTGCAGGATTATAGAGCCCCTTGCATCAAGGTGTGCAAAGTTCAGGTTTAAGCCACTCTCTGAAGAGGTTATGAGCAAGCGTATATTGCACATTAGTAACGAAGAAGGTCTAATTCTAGATGGAGAGGTTTGCTCTTCGCTGCTTAGTATTAGAAATTATGGTTTGAAATAAGCTATTTGGCATGACCAGTGTGATGTAAACTTGCAATCTGTTTAGGCTCTTTCAACCTTAAGTTCAATCTCTCAAGGGGACCTACGTCGAGCTATCACATATTTACAGGTATGATATAGTCTGCAGCGTCGAACAGTTGACAGCTATTCTTTTGGTATTCCCCGTTATGTTAAATATAATTATATTAGAAGCTTGGATGATTAAGGGGAAGAAAACCAACCACATGTTCTACTAGAATTAGTCAAAGTTCTATTAGGGCTACATGAAATTAACCTTTAGGTTATCAATTGTTCTGATTCATCATTGCATGCCCCGAGGCCTGAGTAATTAACTTTTCATTTGTTTTTGGGAATCATTTGGGTTGGGAATTGTTGACCATCCATTGCTATTGAATTTTCTTTCCTATATAACTTACAGTGCTTGTAAAGTAGAAAGAGTACACATGATTGTAGCAACTATCGATATATCCTTGCAGTTCCTTTGTCCAATGCCTGTGTACTGCAAAAAAGATTCAGCTTTAGTTTTTACACTGGTTGAGACTCCAAACAATTTTCAGCTTTAAATTTTATAACAAACAATGGAGTCGTACATGATATCCCTCATAATGGAAATGCATGACAGGGAAAATCTTATGTTGTGTTAAGATATGATTACGGGAGAATTGTAAATCCAATTACTCACTGCCCGTTGTCAACAAGCTCAATTGTTGTTATTTATTTGGATCTTCAGAAATGAAGTTCGCTTAAGAATTCATTCATGCTGCTCTCCTATAATTACTTGAAGCAAGTGTTTCTGTTTTATAATAGAAGCCAGTATATTGTGCCGGTACTCTTGGTTGGTTAACTCTCTATGTAGTTGAGAATAGAATAGTTTCAATCTTTTCTAACTGCTTTATTTTACTCTCTATTTTTGTTCCCTCCAGTCAGCAGCACGCTTATTTGGATCATCAATCTCTTCCAAGGATCTGATTAGTGTGTCTGGGGTGAGTTATGTGAAATTTTGATAAGTCATCATCCCTAGAATAGTAAAAACAGATAGCTAAAAATGATTATGCTAAAAATGATTATGCTTACTAATGATTCACTTTGCTCCCATTCTGGTTGAATGTTGATATTAATCTATGAACACAGTTTGTATATGCCTTGCCCTTATATACATGTGCCTTCAACTTCTTCCAGAATCTAACACCTTGTACATACGCAAGATGCTATCTGTTAATTTTAATTTTTCTTTTGGATGGTTGAATTTTTAACTAGATGATGTTTCGTGTTTTCAGTTTTGTAGGAGTTTTGAGTGTTCTGTTTTCCGCCATTAATTTTTAACTAGATGATGTTTCATGTTTTCTTGTTCTCAAAAGTATGACGAATAATTCGCTCATAAAATATTTCATGCAAAATTTTCTTGGGTAATTATATTTATTGCTGTTGTACTGTATTTTTTTTTTTAATCATTTGCAGGTTATCCCTCGGGAGGTCGTTGATGCCCTTTTTGCTGCTTGTAGAAGTGGTAACTTTGATCTTGCAAACAAGGAAGTCAATAATGTAATTGCAGATGGATATCCAGTGGCTCAGATGCTTTCACAGGTGTTATAATTGCTCAATCTATATTATGTTATTGTATTTTTAAATTATGAATGGAGATAGGTAAAACTCTGATGTTTCCTACAGATATTTGAGGTGGTTGTTGAAGCCCATGATTTGCAAGATGAACAGAAGGCCAGGATATGCAAGAAGTTGGCTGAAGCAGATAAGGTCACTTCTATCTATTTCCATGTTCAATTCCATTTTTGCTCTCTAAAGTTCCATGTGAATTATTATGCATCAGGTTGGATATATTATTAGTTCAAGTAGTAATTTGAAGTGTGTACAATTTTGAATCAATAGATTCTACCAATCTTTTATATATATAACCTGTATATATTGAGCATCCTATCAGAAATGCTTTTCAATGATGTCAGCTACTTAACACAAAAATTTGACAACGGGCATTGCCATTTAATTTCTTTTCATGCAAAATATAAACTGCTCTGAAAATGGGAGTTGCTAATAAGTAGCCCAGTTTATCTTCTTGCATTTAGTAAATTCTTCGTATTATATTGAAGATTTAATGTTGAATCAATATTTTACTTGATTTGGTTGTGGATATAAAATTGAACTTTACCCAATAATTTTCTGGATTGTCATTTACTTCATGGAAACCAACATTATTGTGATGTCAATCTGGCAGTGTCTCGTGGATGGTGCGGATGAATATTTGCAGCTGCTCGATGTGGTTAGTCAAACAATGCAAGCTTTAAATAGTATGCAACTGTAAATCTTTGATCAAACTTAGGGCAGTTTTTAGAATCGGATTGATCTAAGTGATCCATGTTGTATAGAAACAAGGTAGCGCTCTGACTGGTAGAAATTGTTTTAGTTTGTGTTTGATAATCATTTAGTTTTTGGAAATTGTGGTTGTTTCCTCATCAATCCTCCACCTGTAAGTTTTATCTTTGTTGAGAAAATATTTGAATTCTTAGTTAAATTCTAAAAACAAAAACAAGTTCTTGAAAA

mRNA sequence

GGGAAAAGAAAAACAAAAACCCTATTATCGGTGCAGGGAAGGTGGACCAGTGGCTGTAGAGGGAAAGAAATGGCGCCATTGTTGCAGAGCTCTCAACCATGGGTGGAGAAATATCGACCGAAGCAAGTGAAAGATGTGGCGCATCAGGATGAAGTGGTTCGGGTCCTCACCAACACCCTCGAGACTGCCAGTTGTCCTCACATGCTCTTCTATGGACCGCCTGGTACCGGAAAAACCACCACCGCTCTCGCGATTGCCCATCAACTATTCGGTCCTGAACTTTACAAGTCCAGAGTTTTGGAATTGAATGCAAGTGATGACCGTGGGATCAATGTTGTTCGGACTAAGATTAAAGATTTTGCTGGTGTTGCAGTAAGCAGTGGCCAACGCCAAGGGGGTTATCCTTGCCCACCATTCAAGATAATCATTCTGGATGAGGCTGATTCAATGACTGAAGATGCTCAGAATGCCCTGAGGCGTACCATGGAAACACACTCCAAAGTAACACGATTCTTTTTTATATGCAACTATATTAGCAGGATTATAGAGCCCCTTGCATCAAGGTGTGCAAAGTTCAGGTTTAAGCCACTCTCTGAAGAGGTTATGAGCAAGCGTATATTGCACATTAGTAACGAAGAAGGTCTAATTCTAGATGGAGAGGCTCTTTCAACCTTAAGTTCAATCTCTCAAGGGGACCTACGTCGAGCTATCACATATTTACAGTCAGCAGCACGCTTATTTGGATCATCAATCTCTTCCAAGGATCTGATTAGTGTGTCTGGGGTTATCCCTCGGGAGGTCGTTGATGCCCTTTTTGCTGCTTGTAGAAGTGGTAACTTTGATCTTGCAAACAAGGAAGTCAATAATGTAATTGCAGATGGATATCCAGTGGCTCAGATGCTTTCACAGATATTTGAGGTGGTTGTTGAAGCCCATGATTTGCAAGATGAACAGAAGGCCAGGATATGCAAGAAGTTGGCTGAAGCAGATAAGTGTCTCGTGGATGGTGCGGATGAATATTTGCAGCTGCTCGATGTGGTTAGTCAAACAATGCAAGCTTTAAATAGTATGCAACTGTAAATCTTTGATCAAACTTAGGGCAGTTTTTAGAATCGGATTGATCTAAGTGATCCATGTTGTATAGAAACAAGGTAGCGCTCTGACTGGTAGAAATTGTTTTAGTTTGTGTTTGATAATCATTTAGTTTTTGGAAATTGTGGTTGTTTCCTCATCAATCCTCCACCTGTAAGTTTTATCTTTGTTGAGAAAATATTTGAATTCTTAGTTAAATTCTAAAAACAAAAACAAGTTCTTGAAAA

Coding sequence (CDS)

ATGGCGCCATTGTTGCAGAGCTCTCAACCATGGGTGGAGAAATATCGACCGAAGCAAGTGAAAGATGTGGCGCATCAGGATGAAGTGGTTCGGGTCCTCACCAACACCCTCGAGACTGCCAGTTGTCCTCACATGCTCTTCTATGGACCGCCTGGTACCGGAAAAACCACCACCGCTCTCGCGATTGCCCATCAACTATTCGGTCCTGAACTTTACAAGTCCAGAGTTTTGGAATTGAATGCAAGTGATGACCGTGGGATCAATGTTGTTCGGACTAAGATTAAAGATTTTGCTGGTGTTGCAGTAAGCAGTGGCCAACGCCAAGGGGGTTATCCTTGCCCACCATTCAAGATAATCATTCTGGATGAGGCTGATTCAATGACTGAAGATGCTCAGAATGCCCTGAGGCGTACCATGGAAACACACTCCAAAGTAACACGATTCTTTTTTATATGCAACTATATTAGCAGGATTATAGAGCCCCTTGCATCAAGGTGTGCAAAGTTCAGGTTTAAGCCACTCTCTGAAGAGGTTATGAGCAAGCGTATATTGCACATTAGTAACGAAGAAGGTCTAATTCTAGATGGAGAGGCTCTTTCAACCTTAAGTTCAATCTCTCAAGGGGACCTACGTCGAGCTATCACATATTTACAGTCAGCAGCACGCTTATTTGGATCATCAATCTCTTCCAAGGATCTGATTAGTGTGTCTGGGGTTATCCCTCGGGAGGTCGTTGATGCCCTTTTTGCTGCTTGTAGAAGTGGTAACTTTGATCTTGCAAACAAGGAAGTCAATAATGTAATTGCAGATGGATATCCAGTGGCTCAGATGCTTTCACAGATATTTGAGGTGGTTGTTGAAGCCCATGATTTGCAAGATGAACAGAAGGCCAGGATATGCAAGAAGTTGGCTGAAGCAGATAAGTGTCTCGTGGATGGTGCGGATGAATATTTGCAGCTGCTCGATGTGGTTAGTCAAACAATGCAAGCTTTAAATAGTATGCAACTGTAA

Protein sequence

MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVIPREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEAHDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALNSMQL

Homology

[Close]

BLAST of Tan0019314 vs. ExPASy Swiss-Prot
Match: Q93ZX1 (Replication factor C subunit 4 OS=Arabidopsis thaliana OX=3702 GN=RFC4 PE=1 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 3.3e-157
Identity = 279/335 (83.28%), Postives = 307/335 (91.64%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAP+LQSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+TA CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHI NEEGL LDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEA-HDLQDEQKARI 300
           P EVV+ LF AC+SG+FD+ANKEV+N++A+GYP +Q+++Q+F++V EA  D+ D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQALNSM 335
           CK LAE DK LVDGADEYLQLLDV S T+ AL+ M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 335

[Close]

BLAST of Tan0019314 vs. ExPASy Swiss-Prot
Match: Q9FXM3 (Replication factor C subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC2 PE=2 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 5.6e-157
Identity = 279/334 (83.53%), Postives = 306/334 (91.62%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPL+ SSQPWVEKYRP+QVKDVAHQ+EVVRVLT TL+TA  PHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AIA+QL+GPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S  R+GGYPCPP+KIII
Sbjct: 61  AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RKGGYPCPPYKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHI NEEGL LD +AL+TLS+IS GDLRRAITYLQSAARLFGSSISS DLISVSG I
Sbjct: 181 NRILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGSSISSTDLISVSGAI 240

Query: 241 PREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEAHDLQDEQKARIC 300
           P +VV +L A+C+SG FD+ANKEVNN+IADGYPV+Q++SQ  +V+V A D+ DEQKARIC
Sbjct: 241 PEDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNADDIPDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALNSM 335
           KKL EADKCLVDGADEYLQLLDV S+T++AL  M
Sbjct: 301 KKLGEADKCLVDGADEYLQLLDVASETIRALFDM 333

[Close]

BLAST of Tan0019314 vs. ExPASy Swiss-Prot
Match: Q99J62 (Replication factor C subunit 4 OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 2.3e-102
Identity = 187/323 (57.89%), Postives = 242/323 (74.92%), Query Frame = 0


Query: 10  PWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAIAHQLFGP 69
           PWVEKYRPK V +VA QDEVV VL  +LE A  P++LFYGPPGTGKT+T LA A +LFGP
Sbjct: 39  PWVEKYRPKCVDEVAFQDEVVAVLRKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGP 98

Query: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTE 129
           EL++ RVLELNASD+RGI VVR K+K+FA + V SG R  G PCPPFKI+ILDEADSMT 
Sbjct: 99  ELFRLRVLELNASDERGIQVVREKVKNFAQLTV-SGSRSDGKPCPPFKIVILDEADSMTS 158

Query: 130 DAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNE 189
            AQ ALRRTME  SK TRF  ICNY+SRIIEPL SRC+KFRFKPLS+++  +R+L I+ +
Sbjct: 159 AAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQERLLDIAEK 218

Query: 190 EGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLIS-VSGVIPREVVDAL 249
           E + +  E ++ L  IS+GDLR+AIT+LQSA RL G    S+D+I+ ++GVIP   +D +
Sbjct: 219 ENVKIGNEEIAYLVKISEGDLRKAITFLQSATRLTGGKEVSEDVITDIAGVIPAATIDGI 278

Query: 250 FAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEAHDLQDEQKARICKKLAEADK 309
           F AC SG+FD     V N+I +G+   Q+++Q+ + ++E  +L D+ K+ I +KLAE DK
Sbjct: 279 FTACHSGSFDKLEAVVKNLIDEGHAATQLVNQLHDAIIENENLSDKHKSIITEKLAEVDK 338

Query: 310 CLVDGADEYLQLLDVVSQTMQAL 332
           CL DGADE+LQL+ + +  MQ L
Sbjct: 339 CLADGADEHLQLMSLCATVMQQL 360

[Close]

BLAST of Tan0019314 vs. ExPASy Swiss-Prot
Match: P35249 (Replication factor C subunit 4 OS=Homo sapiens OX=9606 GN=RFC4 PE=1 SV=2)

HSP 1 Score: 372.9 bits (956), Expect = 3.9e-102
Identity = 189/324 (58.33%), Postives = 247/324 (76.23%), Query Frame = 0


Query: 10  PWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAIAHQLFGP 69
           PWVEKYRPK V +VA Q+EVV VL  +LE A  P++LFYGPPGTGKT+T LA A +LFGP
Sbjct: 39  PWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGP 98

Query: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTE 129
           EL++ RVLELNASD+RGI VVR K+K+FA + V SG R  G PCPPFKI+ILDEADSMT 
Sbjct: 99  ELFRLRVLELNASDERGIQVVREKVKNFAQLTV-SGSRSDGKPCPPFKIVILDEADSMTS 158

Query: 130 DAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNE 189
            AQ ALRRTME  SK TRF  ICNY+SRIIEPL SRC+KFRFKPLS+++  +R+L I+ +
Sbjct: 159 AAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKK 218

Query: 190 EGLILDGEALSTLSSISQGDLRRAITYLQSAARLF-GSSISSKDLISVSGVIPREVVDAL 249
           E + +  E ++ L  +S+GDLR+AIT+LQSA RL  G  I+ K +  ++GVIP E +D +
Sbjct: 219 ENVKISDEGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGV 278

Query: 250 FAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEAHDLQDEQKARICKKLAEADK 309
           FAAC+SG+FD     V ++I +G+   Q+++Q+ +VVVE ++L D+QK+ I +KLAE DK
Sbjct: 279 FAACQSGSFDKLEAVVKDLIDEGHAATQLVNQLHDVVVE-NNLSDKQKSIITEKLAEVDK 338

Query: 310 CLVDGADEYLQLLDVVSQTMQALN 333
           CL DGADE+LQL+ + +  MQ L+
Sbjct: 339 CLADGADEHLQLISLCATVMQQLS 360

[Close]

BLAST of Tan0019314 vs. ExPASy Swiss-Prot
Match: Q54MD4 (Probable replication factor C subunit 4 OS=Dictyostelium discoideum OX=44689 GN=rfc4 PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.8e-94
Identity = 171/328 (52.13%), Postives = 230/328 (70.12%), Query Frame = 0


Query: 6   QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAIAHQ 65
           + ++PWV KYRPK V DV++Q++V+  L  +L T + PH+LFYGPPGTGKT+T LAIA  
Sbjct: 7   KDTEPWVAKYRPKTVDDVSYQEDVISALKKSLNTGNLPHLLFYGPPGTGKTSTILAIAMD 66

Query: 66  LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEAD 125
           ++GPEL K RVLELNASD+RGI VVRTKIK+FAG AV+        P   FK+IILDEAD
Sbjct: 67  IYGPELMKQRVLELNASDERGIEVVRTKIKNFAGYAVNKTTTGTSNPGATFKLIILDEAD 126

Query: 126 SMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILH 185
           SMT DAQ ALRRT+ET SK TRF  +CNYISRII+PLASRCAKFRFKPL      +R+  
Sbjct: 127 SMTTDAQAALRRTIETTSKTTRFCLLCNYISRIIDPLASRCAKFRFKPLDTVATIERLKF 186

Query: 186 ISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVIPREVV 245
           IS +EG+  +      +  +S GD+R+AITYLQSA R F + IS   + +++G +P +++
Sbjct: 187 ISQQEGIKCEESVYQAIQVVSNGDMRKAITYLQSAFRFFANKISEDVIYNIAGSLPPQLI 246

Query: 246 DALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEAHDLQDEQKARICKKLAE 305
             L   C+  +FD     V ++IA GYPV+Q++SQ+F+ V+   DL   QK+ I  K+  
Sbjct: 247 KQLVDCCKKNSFDRLQSMVQSIIAQGYPVSQVISQLFDYVLTTKDLNQSQKSHITMKIGN 306

Query: 306 ADKCLVDGADEYLQLLDVVSQTMQALNS 334
            D+ L+DG++E+LQL D+ S  M+ LN+
Sbjct: 307 VDRNLIDGSEEFLQLFDLSSYIMKQLNN 334

[Close]

BLAST of Tan0019314 vs. NCBI nr
Match: XP_038897028.1 (replication factor C subunit 4 [Benincasa hispida])

HSP 1 Score: 640.2 bits (1650), Expect = 1.0e-179
Identity = 324/336 (96.43%), Postives = 334/336 (99.40%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHISNEEGL LDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDL+SVSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVSVSGII 240

Query: 241 PREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEAHDLQDEQKARIC 300
           PREVVDALF+AC+SGNFD+ANKEVNNV+A+GYPVAQMLSQIFEVVVE +DLQDEQKARIC
Sbjct: 241 PREVVDALFSACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVVVEDNDLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALNSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQAL+SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL 336

[Close]

BLAST of Tan0019314 vs. NCBI nr
Match: XP_023523758.1 (replication factor C subunit 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 638.6 bits (1646), Expect = 2.9e-179
Identity = 326/337 (96.74%), Postives = 334/337 (99.11%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSE+VMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEKVMS 180

Query: 181 KRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHISNEEGL LDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEAHDLQDEQKARIC 300
           PREVVD LFAAC+SGNFDLANKEVNNVIA+GYPVAQMLSQIFEVV+EAHDLQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQAL-NSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQAL +SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQL 337

[Close]

BLAST of Tan0019314 vs. NCBI nr
Match: XP_022981026.1 (replication factor C subunit 4 [Cucurbita maxima])

HSP 1 Score: 635.6 bits (1638), Expect = 2.5e-178
Identity = 324/337 (96.14%), Postives = 332/337 (98.52%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHS VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSNVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHISNEEGL LDGEALSTL SISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLGSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEAHDLQDEQKARIC 300
           PREVVD LFAAC+SGNFDLANKEVNNVIA+GYPVAQMLSQIFEVV+EAHDLQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQAL-NSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQAL +SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQL 337

[Close]

BLAST of Tan0019314 vs. NCBI nr
Match: KAG6608033.1 (Replication factor C subunit 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 634.4 bits (1635), Expect = 5.5e-178
Identity = 324/337 (96.14%), Postives = 332/337 (98.52%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVM 
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMG 180

Query: 181 KRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHISNEEGL LD EALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDEEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEAHDLQDEQKARIC 300
           PREVVD LFAAC+SGNFDLANKEVNNVIA+GYPVAQMLSQIFEVV+EAHDLQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQAL-NSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQAL +SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQL 337

[Close]

BLAST of Tan0019314 vs. NCBI nr
Match: XP_022940132.1 (replication factor C subunit 4 [Cucurbita moschata])

HSP 1 Score: 633.3 bits (1632), Expect = 1.2e-177
Identity = 324/337 (96.14%), Postives = 331/337 (98.22%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVM 
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMG 180

Query: 181 KRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHISNEEGL LD EALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDEEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEAHDLQDEQKARIC 300
           PREVVD LFAACRSGNFDLANKEVNNVIA+GYPVAQMLSQIFEVV+EAHDLQDEQ A+IC
Sbjct: 241 PREVVDELFAACRSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQTAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQAL-NSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQAL +SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQL 337

[Close]

BLAST of Tan0019314 vs. ExPASy TrEMBL
Match: A0A6J1IVB8 (replication factor C subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111480296 PE=3 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 1.2e-178
Identity = 324/337 (96.14%), Postives = 332/337 (98.52%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHS VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSNVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHISNEEGL LDGEALSTL SISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLGSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEAHDLQDEQKARIC 300
           PREVVD LFAAC+SGNFDLANKEVNNVIA+GYPVAQMLSQIFEVV+EAHDLQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQAL-NSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQAL +SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQL 337

[Close]

BLAST of Tan0019314 vs. ExPASy TrEMBL
Match: A0A6J1FIS1 (replication factor C subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111445849 PE=3 SV=1)

HSP 1 Score: 633.3 bits (1632), Expect = 6.0e-178
Identity = 324/337 (96.14%), Postives = 331/337 (98.22%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVM 
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMG 180

Query: 181 KRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHISNEEGL LD EALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDEEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEAHDLQDEQKARIC 300
           PREVVD LFAACRSGNFDLANKEVNNVIA+GYPVAQMLSQIFEVV+EAHDLQDEQ A+IC
Sbjct: 241 PREVVDELFAACRSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQTAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQAL-NSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQAL +SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQL 337

[Close]

BLAST of Tan0019314 vs. ExPASy TrEMBL
Match: A0A1S3B9T6 (LOW QUALITY PROTEIN: replication factor C subunit 4 OS=Cucumis melo OX=3656 GN=LOC103487609 PE=3 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 7.8e-178
Identity = 320/336 (95.24%), Postives = 330/336 (98.21%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRF FICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFXFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHISNEEGL LDGEALSTLSS+SQGDLRRAITYLQSAARLFGSSISSKDL++VSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240

Query: 241 PREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEAHDLQDEQKARIC 300
           PREVVDALF AC+SGNFD ANKEVNNV+A+GYPVAQMLSQIFEVV+E +DLQDEQKARIC
Sbjct: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALNSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQAL SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL 336

[Close]

BLAST of Tan0019314 vs. ExPASy TrEMBL
Match: A0A0A0KYI8 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G361280 PE=3 SV=1)

HSP 1 Score: 629.0 bits (1621), Expect = 1.1e-176
Identity = 317/336 (94.35%), Postives = 329/336 (97.92%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETA+CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEEGL LDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDL++VSG+I
Sbjct: 181 KRILHIGNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240

Query: 241 PREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEAHDLQDEQKARIC 300
           P+EVVDALF AC+SGNFD ANK+VNNV+A+GYPVAQMLSQIFEVV+E +DLQDEQKARIC
Sbjct: 241 PQEVVDALFVACKSGNFDTANKKVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALNSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQ L S+QL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQVLRSIQL 336

[Close]

BLAST of Tan0019314 vs. ExPASy TrEMBL
Match: A0A6J1C0Y1 (replication factor C subunit 4 OS=Momordica charantia OX=3673 GN=LOC111006413 PE=3 SV=1)

HSP 1 Score: 624.8 bits (1610), Expect = 2.1e-175
Identity = 321/335 (95.82%), Postives = 326/335 (97.31%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE L LDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI
Sbjct: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240

Query: 241 PREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEAHDLQDEQKARIC 300
           PREVV+ALFAAC+SGNFDLANKEVNNV A+GYPVAQMLSQIFEVVVEA+ LQDEQKARIC
Sbjct: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALNSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQA  SMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQ 335

[Close]

BLAST of Tan0019314 vs. TAIR 10
Match: AT1G21690.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 555.8 bits (1431), Expect = 2.3e-158
Identity = 279/335 (83.28%), Postives = 307/335 (91.64%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAP+LQSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+TA CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHI NEEGL LDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEA-HDLQDEQKARI 300
           P EVV+ LF AC+SG+FD+ANKEV+N++A+GYP +Q+++Q+F++V EA  D+ D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQALNSM 335
           CK LAE DK LVDGADEYLQLLDV S T+ AL+ M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 335

[Close]

BLAST of Tan0019314 vs. TAIR 10
Match: AT1G21690.4 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 534.3 bits (1375), Expect = 7.2e-152
Identity = 272/335 (81.19%), Postives = 300/335 (89.55%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAP+LQSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+TA CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AIAHQLFG       VLELNASDDRGINVVRTKIKDFA VAV S  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFG-------VLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHI NEEGL LDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEA-HDLQDEQKARI 300
           P EVV+ LF AC+SG+FD+ANKEV+N++A+GYP +Q+++Q+F++V EA  D+ D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQALNSM 335
           CK LAE DK LVDGADEYLQLLDV S T+ AL+ M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 328

[Close]

BLAST of Tan0019314 vs. TAIR 10
Match: AT1G21690.2 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 528.1 bits (1359), Expect = 5.2e-150
Identity = 269/335 (80.30%), Postives = 296/335 (88.36%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAP+LQSSQPWVEKYRPKQVKDVAHQ+EV            CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEV------------CPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHI NEEGL LDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEA-HDLQDEQKARI 300
           P EVV+ LF AC+SG+FD+ANKEV+N++A+GYP +Q+++Q+F++V EA  D+ D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQALNSM 335
           CK LAE DK LVDGADEYLQLLDV S T+ AL+ M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 323

[Close]

BLAST of Tan0019314 vs. TAIR 10
Match: AT1G21690.3 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 523.5 bits (1347), Expect = 1.3e-148
Identity = 260/309 (84.14%), Postives = 286/309 (92.56%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAP+LQSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+TA CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHI NEEGL LDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVDALFAACRSGNFDLANKEVNNVIADGYPVAQMLSQIFEVVVEA-HDLQDEQKARI 300
           P EVV+ LF AC+SG+FD+ANKEV+N++A+GYP +Q+++Q+F++V EA  D+ D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADK 309
           CK LAE DK
Sbjct: 301 CKCLAETDK 309

[Close]

BLAST of Tan0019314 vs. TAIR 10
Match: AT1G77470.1 (replication factor C subunit 3 )

HSP 1 Score: 197.2 bits (500), Expect = 2.1e-50
Identity = 117/331 (35.35%), Postives = 188/331 (56.80%), Query Frame = 0


Query: 3   PLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAI 62
           P    + PWVEKYRP+ + DVA   +++  +         PH+L YGPPGTGKT+T LA+
Sbjct: 33  PPQSKATPWVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAV 92

Query: 63  AHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILD 122
           A +L+GP+ Y++ +LELNASDDRGI+VVR +I+DFA     S  +         K+++LD
Sbjct: 93  ARKLYGPK-YRNMILELNASDDRGIDVVRQQIQDFASTQSFSLGKSS------VKLVLLD 152

Query: 123 EADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKR 182
           EAD+MT+DAQ ALRR +E ++K TRF  I N++++II  L SRC +FRF PL    MS+R
Sbjct: 153 EADAMTKDAQFALRRVIEKYTKSTRFALIGNHVNKIIPALQSRCTRFRFAPLDGVHMSQR 212

Query: 183 ILHISNEEGLILDGEALSTLSSISQGDLRRAITYLQSA-------ARLFGSSISSKDLIS 242
           + H+   E L++    L+ L  +S GD+R+A+  LQS               I+ +D+  
Sbjct: 213 LKHVIEAERLVVSDCGLAALVRLSNGDMRKALNILQSTHMASKEITEEESKQITEEDVYL 272

Query: 243 VSGVIPREVVDALFAACRSGNFDLANKEVNNV-IADGYPVAQMLSQIFEVVVEAHDLQDE 302
            +G    + ++ +     +  FD   K+V+ +    G  +  ++ +I   + +   +   
Sbjct: 273 CTGNPLPKDIEQISHWLLNKPFDECYKDVSEIKTRKGLAIVDIVKEITLFIFKI-KMPSA 332

Query: 303 QKARICKKLAEADKCLVDGADEYLQLLDVVS 326
            + ++   LA+ +  L  G ++ LQL  ++S
Sbjct: 333 VRVQLINDLADIEYRLSFGCNDKLQLGAIIS 355

The following BLAST results are available for this feature:

BLAST of Tan0019314 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZX1	3.3e-157	83.28	Replication factor C subunit 4 OS=Arabidopsis thaliana OX=3702 GN=RFC4 PE=1 SV=1	[more]
Q9FXM3	5.6e-157	83.53	Replication factor C subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC2 ...	[more]
Q99J62	2.3e-102	57.89	Replication factor C subunit 4 OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=1	[more]
P35249	3.9e-102	58.33	Replication factor C subunit 4 OS=Homo sapiens OX=9606 GN=RFC4 PE=1 SV=2	[more]
Q54MD4	1.8e-94	52.13	Probable replication factor C subunit 4 OS=Dictyostelium discoideum OX=44689 GN=...	[more]

BLAST of Tan0019314 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897028.1	1.0e-179	96.43	replication factor C subunit 4 [Benincasa hispida]	[more]
XP_023523758.1	2.9e-179	96.74	replication factor C subunit 4 [Cucurbita pepo subsp. pepo]	[more]
XP_022981026.1	2.5e-178	96.14	replication factor C subunit 4 [Cucurbita maxima]	[more]
KAG6608033.1	5.5e-178	96.14	Replication factor C subunit 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022940132.1	1.2e-177	96.14	replication factor C subunit 4 [Cucurbita moschata]	[more]

BLAST of Tan0019314 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IVB8	1.2e-178	96.14	replication factor C subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111480296 PE=3 ...	[more]
A0A6J1FIS1	6.0e-178	96.14	replication factor C subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111445849 PE=...	[more]
A0A1S3B9T6	7.8e-178	95.24	LOW QUALITY PROTEIN: replication factor C subunit 4 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A0A0KYI8	1.1e-176	94.35	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G361280 PE=3 SV...	[more]
A0A6J1C0Y1	2.1e-175	95.82	replication factor C subunit 4 OS=Momordica charantia OX=3673 GN=LOC111006413 PE...	[more]

BLAST of Tan0019314 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21690.1	2.3e-158	83.28	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.4	7.2e-152	81.19	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.2	5.2e-150	80.30	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.3	1.3e-148	84.14	ATPase family associated with various cellular activities (AAA)	[more]
AT1G77470.1	2.1e-50	35.35	replication factor C subunit 3	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 41..174 e-value: 6.9E-14 score: 62.1
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 45..172 e-value: 4.7E-17 score: 62.7
IPR013748	Replication factor C, C-terminal	PFAM	PF08542	Rep_fac_C	coord: 241..326 e-value: 9.3E-22 score: 77.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 3..173 e-value: 3.3E-55 score: 188.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..233
None	No IPR available	GENE3D	1.20.272.10		coord: 240..330 e-value: 1.3E-31 score: 110.6
None	No IPR available	GENE3D	1.10.8.60		coord: 176..239 e-value: 9.0E-15 score: 56.0
None	No IPR available	PANTHER	PTHR11669	REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT	coord: 7..330
None	No IPR available	PANTHER	PTHR11669:SF20	REPLICATION FACTOR C SUBUNIT 4	coord: 7..330
None	No IPR available	CDD	cd18140	HLD_clamp_RFC	coord: 174..233 e-value: 2.0257E-13 score: 62.5465
None	No IPR available	CDD	cd00009	AAA	coord: 26..166 e-value: 8.05144E-26 score: 98.7575
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	SUPERFAMILY	48019	post-AAA+ oligomerization domain-like	coord: 240..326

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0019314.1	Tan0019314.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005663	DNA replication factor C complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009536	plastid
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003689	DNA clamp loader activity