Tan0019296 (gene) Snake gourd v1

Overview
NameTan0019296
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionActin-depolymerizing factor
LocationLG03: 66269679 .. 66271970 (-)
RNA-Seq ExpressionTan0019296
SyntenyTan0019296
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTTCTTGAAGCCGACTTCAAGTAAGGGAAAGGAAGCTCATCATCGTTTTCAACAGTGTTTACACCAACACGACACGCTCCTCTGGTATTTGAATCACTGGCACCGTAATTAACACTCTCAACCACCGAATATAACCCCCCAAAATTCGTTCATTCATTCTTCAACTCCTTCTCTTCATTCTCATCGCTGAACAGACTCTTTTCTTTTTGTCTATCTATCATCCTCTCCGATTTCTCTGTTCGTTGAGCTCTTCCGCAACCATCGAAGCAGAAGAATGGTAATCCCTTGATTCATTTGCTTCGTCTTTAGCTTCCCATGTTTTTGATTACATGATCCGTTTGGTTGTTGGGAAAGATTAGGGAAATTGTTGAAAGTGCCCCTGCAGATGGGGTTGTGTTCATTTGTCACGATTCTGCTGATTTCCAGTTGGGAAATGTGTTTTTGTTGTTTGGGTTCTCTTTTTGGTTCAACTTGGTTTTTGATCTGGGTTAATCTGACTTGACTGGGATTATTTGAATTTGTTTGGATTGGATTGATTTATGGTTCTTGAGTTGTTTTGGTGTGTAGATTTTGCTCTGAGATCTAGATATCTGATCTGGTTTGTGTTGGAATTGATTTTGTGTGAAGCAAGTGGATGATTTTGTTTTATGATCGGTTGAACTAGAGAATTTCCAACTACTTCTGTCTCCTTAGTTCTTGTCTAAAATCTCTCCTGTGATGGAAAAGGGCCCTGTGAGTGTTTTACTTCTTCCCCCTCTAAGATCCAATCCTCCTTTCAAAGTTGTATGGAGTTTTGCTGTTGCAATAATCTGTGTTTTGCATCATGAACTGAGAAATGCTATGTATTCATTATGCTCGCTTGATCATGGATATGGTTTAAACTACATATTTTTGTGGCATTCCTTACAGAAACAGGAGTAGATAAAATAATTTTTAATTTTGAGTTGTGATTTTCATTCTCAATACTAGAACATAACAATCACCAATCCTTTGTCTTCTGTAAAGAAAGAGGGAAAATCATTTTCACACATTTTTGTTAGCTTTGCAACTCAGAAGCCAAATGAAGGGTTAAAAGGAAGGTGTGTTTTGGCTGTCAGTCAAACCTTTATTTTCATTGGTTAGCCTTGTTTTCGAGCTATAAGATACTTTGAGGAGATCAAATATTACAATCTTAGCTTGACCATTTTGAATGACTTAAATCCTTGGACTGCAACCCAAAATGTGTTAATAAGAATACTCTTTTATGAATGTGACAGGCCAATGCAGCATCAGGAATGGCTGTGAATGATGAATGCAAGCTAAAATTTTTGGAGCTCAAGTCAAAAAGAACTCATCGTTCCATCGTCTTTAAGATTGAGGAGAAGCTGAAGCAAGTAGTTGTGGAGAAACTTGGTGGGCCTAGCCAAAGTTATGAGGATTTTGCTGCTAGTCTCCCAGCTGACGAGTGTCGTTATGCTGTATATGATTTCGACTTTGTCACAGAAGAAAATTGCCAAAAAAGCAGGATTTTCTTCATAGCATGGTAATGGCAATTCTTCAGTCTCTCCACTTATATTATCAAGTGATTGCATACTTCATCTAATCGCTTAGTTACATTGTTAAATGAAGGTCTCCTGATAATTCAAGGGTAAGAAGCAAGATGATATACGCAAGCTCCAAGGACAGATTCAAGAGAGAGCTTGATGGAATACAAGTAGAGCTGCAAGCAACTGATCCGACCGAGATGGGTCTCGATGTCATTCGAAGCCGTGCCAACTGAGCTGCAAGCAACTGATCGAAATGTTTGAAGTTTGTGAGCTGGAGGCTTAGATTTCACTGGAAATCTTCTGTTCTACTTGAACAAGTATGCATCTGTTTGTTGTCTACTGTGTCATGGCATTTCTTTTAACTTGTTATGCAACTTTTTGTCTTGAGTGACCATCTAATATATCTATAGATATATTGAGCCTGCGAGGGGTTAGCTGAGACCCTATGCTAATTTCAACTTTGTTTTTTCAGTTTTCTACTTTGGATTGCTGCTTTTGAAGTGTTTCTGTATTTAATAACATTACATTCGTTCTTTAGCCAAATATTATCCTCTCTACTTTTGGGTTATTGTCATTTGCTTTGGCAGTAAGTAAATATTGATTGCAGTAAGTAATTTTTTCTCTCCTTTCTTCAACCATCGCCCTAAGGGCTTTAGCAATTCCTAATTTGTTTCGACGTCATTTAATCCCTCGAGGATATGAGCACTTTTGCTATAAAGCAAGCCATTCCGACGAGCTCAACAATTCAAAGTGATGGTAGGAC

mRNA sequence

CTTTTTCTTGAAGCCGACTTCAAGTAAGGGAAAGGAAGCTCATCATCGTTTTCAACAGTGTTTACACCAACACGACACGCTCCTCTGGTATTTGAATCACTGGCACCGTAATTAACACTCTCAACCACCGAATATAACCCCCCAAAATTCGTTCATTCATTCTTCAACTCCTTCTCTTCATTCTCATCGCTGAACAGACTCTTTTCTTTTTGTCTATCTATCATCCTCTCCGATTTCTCTGTTCGTTGAGCTCTTCCGCAACCATCGAAGCAGAAGAATGGCCAATGCAGCATCAGGAATGGCTGTGAATGATGAATGCAAGCTAAAATTTTTGGAGCTCAAGTCAAAAAGAACTCATCGTTCCATCGTCTTTAAGATTGAGGAGAAGCTGAAGCAAGTAGTTGTGGAGAAACTTGGTGGGCCTAGCCAAAGTTATGAGGATTTTGCTGCTAGTCTCCCAGCTGACGAGTGTCGTTATGCTGTATATGATTTCGACTTTGTCACAGAAGAAAATTGCCAAAAAAGCAGGATTTTCTTCATAGCATGGTCTCCTGATAATTCAAGGGTAAGAAGCAAGATGATATACGCAAGCTCCAAGGACAGATTCAAGAGAGAGCTTGATGGAATACAAGTAGAGCTGCAAGCAACTGATCCGACCGAGATGGGTCTCGATGTCATTCGAAGCCGTGCCAACTGAGCTGCAAGCAACTGATCGAAATGTTTGAAGTTTGTGAGCTGGAGGCTTAGATTTCACTGGAAATCTTCTGTTCTACTTGAACAAGTATGCATCTGTTTGTTGTCTACTGTGTCATGGCATTTCTTTTAACTTGTTATGCAACTTTTTGTCTTGAGTGACCATCTAATATATCTATAGATATATTGAGCCTGCGAGGGGTTAGCTGAGACCCTATGCTAATTTCAACTTTGTTTTTTCAGTTTTCTACTTTGGATTGCTGCTTTTGAAGTGTTTCTGTATTTAATAACATTACATTCGTTCTTTAGCCAAATATTATCCTCTCTACTTTTGGGTTATTGTCATTTGCTTTGGCAGTAAGTAAATATTGATTGCAGTAAGTAATTTTTTCTCTCCTTTCTTCAACCATCGCCCTAAGGGCTTTAGCAATTCCTAATTTGTTTCGACGTCATTTAATCCCTCGAGGATATGAGCACTTTTGCTATAAAGCAAGCCATTCCGACGAGCTCAACAATTCAAAGTGATGGTAGGAC

Coding sequence (CDS)

ATGGCCAATGCAGCATCAGGAATGGCTGTGAATGATGAATGCAAGCTAAAATTTTTGGAGCTCAAGTCAAAAAGAACTCATCGTTCCATCGTCTTTAAGATTGAGGAGAAGCTGAAGCAAGTAGTTGTGGAGAAACTTGGTGGGCCTAGCCAAAGTTATGAGGATTTTGCTGCTAGTCTCCCAGCTGACGAGTGTCGTTATGCTGTATATGATTTCGACTTTGTCACAGAAGAAAATTGCCAAAAAAGCAGGATTTTCTTCATAGCATGGTCTCCTGATAATTCAAGGGTAAGAAGCAAGATGATATACGCAAGCTCCAAGGACAGATTCAAGAGAGAGCTTGATGGAATACAAGTAGAGCTGCAAGCAACTGATCCGACCGAGATGGGTCTCGATGTCATTCGAAGCCGTGCCAACTGA

Protein sequence

MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVIRSRAN
Homology
[Close]
BLAST of Tan0019296 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.5e-63
Identity = 120/139 (86.33%), Postives = 131/139 (94.24%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHR IV+KIEEK KQVVVEK+G P++SYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P +ECRYAVYDFDFVT ENCQKSRIFFIAW PD +RVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQA DPTEMGLDVI+SRAN
Sbjct: 121 LQACDPTEMGLDVIQSRAN 139

[Close]
BLAST of Tan0019296 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 2.8e-62
Identity = 118/138 (85.51%), Postives = 130/138 (94.20%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKLKFLELK+KRT+R I++KIEEK K+VVVEKLG P++SYEDF A L
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDF+T+EN QKSRIFFIAWSPD +RVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTEMGLDV RSRA
Sbjct: 121 LQATDPTEMGLDVFRSRA 138

[Close]
BLAST of Tan0019296 vs. ExPASy Swiss-Prot
Match: Q0DLA3 (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 PE=3 SV=2)

HSP 1 Score: 238.4 bits (607), Expect = 4.8e-62
Identity = 116/139 (83.45%), Postives = 131/139 (94.24%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+DECKLKFLELK+KRT+R I++KI+EK K VVVEK+G P  +Y+DFAASL
Sbjct: 1   MANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PA+ECRYA++D+DFVTEENCQKS+IFFIAWSPD SRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTE+GLDVIR RAN
Sbjct: 121 LQATDPTEVGLDVIRGRAN 139

[Close]
BLAST of Tan0019296 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 6.2e-62
Identity = 117/139 (84.17%), Postives = 129/139 (92.81%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHR IV+KIEEK KQVVVEK+G P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEM LDV RSRAN
Sbjct: 121 LQATDPTEMDLDVFRSRAN 139

[Close]
BLAST of Tan0019296 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 236.5 bits (602), Expect = 1.8e-61
Identity = 115/139 (82.73%), Postives = 129/139 (92.81%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHR IV+KIEEK KQV+VEK+G P  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEM LDV++SR N
Sbjct: 121 LQATDPTEMDLDVLKSRVN 139

[Close]
BLAST of Tan0019296 vs. NCBI nr
Match: XP_038881189.1 (actin-depolymerizing factor 1-like isoform X3 [Benincasa hispida] >XP_038881190.1 actin-depolymerizing factor 1-like isoform X3 [Benincasa hispida])

HSP 1 Score: 273.9 bits (699), Expect = 7.8e-70
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHR IVFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEMGLDVIRSRAN
Sbjct: 121 LQATDPTEMGLDVIRSRAN 139

[Close]
BLAST of Tan0019296 vs. NCBI nr
Match: XP_022972737.1 (actin-depolymerizing factor 1-like [Cucurbita maxima] >XP_023517168.1 actin-depolymerizing factor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 272.3 bits (695), Expect = 2.3e-69
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHR IVFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSK+RFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEMGLDVIRSRAN
Sbjct: 121 LQATDPTEMGLDVIRSRAN 139

[Close]
BLAST of Tan0019296 vs. NCBI nr
Match: XP_038881187.1 (actin-depolymerizing factor 1-like isoform X2 [Benincasa hispida] >XP_038881188.1 actin-depolymerizing factor 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 272.3 bits (695), Expect = 2.3e-69
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 0 

Query: 2   ANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLP 61
           ANAASGMAVNDECKLKFLELKSKRTHR IVFKIEEKLKQVVVEKLGGPSQSYEDFAASLP
Sbjct: 5   ANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLP 64

Query: 62  ADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVEL 121
           ADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 65  ADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVEL 124

Query: 122 QATDPTEMGLDVIRSRAN 140
           QATDPTEMGLDVIRSRAN
Sbjct: 125 QATDPTEMGLDVIRSRAN 142

[Close]
BLAST of Tan0019296 vs. NCBI nr
Match: XP_038881186.1 (actin-depolymerizing factor 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 272.3 bits (695), Expect = 2.3e-69
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 0 

Query: 2   ANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLP 61
           ANAASGMAVNDECKLKFLELKSKRTHR IVFKIEEKLKQVVVEKLGGPSQSYEDFAASLP
Sbjct: 50  ANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLP 109

Query: 62  ADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVEL 121
           ADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 110 ADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVEL 169

Query: 122 QATDPTEMGLDVIRSRAN 140
           QATDPTEMGLDVIRSRAN
Sbjct: 170 QATDPTEMGLDVIRSRAN 187

[Close]
BLAST of Tan0019296 vs. NCBI nr
Match: XP_022962833.1 (actin-depolymerizing factor 1-like [Cucurbita moschata])

HSP 1 Score: 271.6 bits (693), Expect = 3.9e-69
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHR I+FKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSK+RFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEMGLD+IRSRAN
Sbjct: 121 LQATDPTEMGLDIIRSRAN 139

[Close]
BLAST of Tan0019296 vs. ExPASy TrEMBL
Match: A0A6J1I5N8 (actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471251 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHR IVFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSK+RFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEMGLDVIRSRAN
Sbjct: 121 LQATDPTEMGLDVIRSRAN 139

[Close]
BLAST of Tan0019296 vs. ExPASy TrEMBL
Match: A0A6J1HFY8 (actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111463208 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.9e-69
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHR I+FKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSK+RFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEMGLD+IRSRAN
Sbjct: 121 LQATDPTEMGLDIIRSRAN 139

[Close]
BLAST of Tan0019296 vs. ExPASy TrEMBL
Match: A0A6J1GD54 (actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453110 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 7.1e-69
Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHR I+FKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTEMGLDVIRSRA
Sbjct: 121 LQATDPTEMGLDVIRSRA 138

[Close]
BLAST of Tan0019296 vs. ExPASy TrEMBL
Match: A0A0A0KX62 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G294380 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHR IVFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PA+ECRYAVYDFDFVTEENCQKSRIFFIAWSPD+S+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEMGLDVIRSRAN
Sbjct: 121 LQATDPTEMGLDVIRSRAN 139

[Close]
BLAST of Tan0019296 vs. ExPASy TrEMBL
Match: A0A6J1IRV5 (actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478768 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.6e-68
Identity = 134/138 (97.10%), Postives = 136/138 (98.55%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELK+KRTHR I+FKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKTKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTEMGLDVIRSRA
Sbjct: 121 LQATDPTEMGLDVIRSRA 138

[Close]
BLAST of Tan0019296 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 238.0 bits (606), Expect = 4.4e-63
Identity = 117/139 (84.17%), Postives = 129/139 (92.81%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHR IV+KIEEK KQVVVEK+G P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEM LDV RSRAN
Sbjct: 121 LQATDPTEMDLDVFRSRAN 139

[Close]
BLAST of Tan0019296 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 236.5 bits (602), Expect = 1.3e-62
Identity = 116/138 (84.06%), Postives = 128/138 (92.75%), Query Frame = 0 

Query: 2   ANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLP 61
           ANAASGMAV+D+CKL+FLELK+KRTHR IV+KIEEK KQVVVEK+G P Q+YE+FAA LP
Sbjct: 13  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72

Query: 62  ADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVEL 121
           ADECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 73  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132

Query: 122 QATDPTEMGLDVIRSRAN 140
           QATDPTEM LDV RSRAN
Sbjct: 133 QATDPTEMDLDVFRSRAN 150

[Close]
BLAST of Tan0019296 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 236.5 bits (602), Expect = 1.3e-62
Identity = 115/139 (82.73%), Postives = 129/139 (92.81%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHR IV+KIEEK KQV+VEK+G P  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEM LDV++SR N
Sbjct: 121 LQATDPTEMDLDVLKSRVN 139

[Close]
BLAST of Tan0019296 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 233.0 bits (593), Expect = 1.4e-61
Identity = 113/139 (81.29%), Postives = 128/139 (92.09%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKLKF+ELK+KRT R+IV+KIE+  KQV+VEKLG P QSY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PAD+CRY +YDFDFVT ENCQKS+IFFIAWSPD ++VR KMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEMGLDV +SR N
Sbjct: 121 LQATDPTEMGLDVFKSRTN 137

[Close]
BLAST of Tan0019296 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 227.6 bits (579), Expect = 6.0e-60
Identity = 106/139 (76.26%), Postives = 126/139 (90.65%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRSIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MAN+ASGM VNDECK+KFLELK+KRT+R IVFKI+EK +QV +EKLG P ++Y+DF +S+
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFDF TE+NCQKS+IFFIAWSPD SRVRSKM+YASSKDRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDP+EM LD+I+ R N
Sbjct: 121 LQATDPSEMSLDIIKGRLN 139

The following BLAST results are available for this feature:
BLAST of Tan0019296 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FVI21.5e-6386.33Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1[more]
Q9FVI12.8e-6285.51Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1[more]
Q0DLA34.8e-6283.45Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 P... [more]
Q392506.2e-6284.17Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1[more]
Q9ZSK31.8e-6182.73Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2[more]
BLAST of Tan0019296 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038881189.17.8e-7099.28actin-depolymerizing factor 1-like isoform X3 [Benincasa hispida] >XP_038881190.... [more]
XP_022972737.12.3e-6998.56actin-depolymerizing factor 1-like [Cucurbita maxima] >XP_023517168.1 actin-depo... [more]
XP_038881187.12.3e-6999.28actin-depolymerizing factor 1-like isoform X2 [Benincasa hispida] >XP_038881188.... [more]
XP_038881186.12.3e-6999.28actin-depolymerizing factor 1-like isoform X1 [Benincasa hispida][more]
XP_022962833.13.9e-6997.12actin-depolymerizing factor 1-like [Cucurbita moschata][more]
BLAST of Tan0019296 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I5N81.1e-6998.56actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471251 P... [more]
A0A6J1HFY81.9e-6997.12actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111463208... [more]
A0A6J1GD547.1e-6997.83actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453110... [more]
A0A0A0KX621.2e-6897.12ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G294380 PE=3 ... [more]
A0A6J1IRV51.6e-6897.10actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478768 P... [more]
BLAST of Tan0019296 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G46010.14.4e-6384.17actin depolymerizing factor 1 [more]
AT3G46010.21.3e-6284.06actin depolymerizing factor 1 [more]
AT5G59890.11.3e-6282.73actin depolymerizing factor 4 [more]
AT3G46000.11.4e-6181.29actin depolymerizing factor 2 [more]
AT4G00680.16.0e-6076.26actin depolymerizing factor 8 [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 12..139
e-value: 1.2E-58
score: 210.8
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 14..136
e-value: 1.6E-36
score: 124.8
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 7..139
score: 37.848068
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 1..139
e-value: 1.1E-51
score: 176.8
NoneNo IPR availablePANTHERPTHR11913:SF74ACTIN-DEPOLYMERIZING FACTOR 2-LIKEcoord: 1..139
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 2..137
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 1..139
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 6..138
e-value: 6.92038E-66
score: 194.313

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0019296.1Tan0019296.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005737 cytoplasm
molecular_function GO:0051015 actin filament binding
molecular_function GO:0003779 actin binding