Tan0019141 (gene) Snake gourd v1

Overview


Name	Tan0019141
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Growth-regulating factor
Location	LG08: 62795005 .. 62797603 (-)
RNA-Seq Expression	Tan0019141
Synteny	Tan0019141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCAACAACAAATACCCAAATATCAAAGATAAGACATATACTTCAGTTTTTTCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGCACTCTTTTCGTTTCTGTTTGTTTAGAGGCGATGAGAATCAGAAAGCGGCAGGTCCCATTACCCTTTTCTTCTGTGTCTCCTCTCTCAGATCCCCTCCTCCGCCCGGTGCAACTCCATCGTCCCATCACCACCACCTCCCACGCCGCCGATGCCCCAACGAATCTGCATCTCTACGATTTCGCCGCTCCACACACCAATGCTTTGGTCAGTGAAATCAACTCAACTCTTTTCTTTTTCTTTTCTTCCCTTTTCCTTTACCCTCTTGATTTCCGATTTTCCTTTTTCCCTTTTTGTTTTTCTGATTTTATATTGTGAAAAAAAACTGCACCTCATCCCGTCCCTCAAATCAAGCCCAATTAACAAACACCACAAATCAAATGTCTCTATATCTACCCTTTTTAATTCATTTCTGTGCAGGAGAAGGATCATCAACAATATCATCAGGCTCCTCATACCAGGTATCAACTAATTCACACCACACCTAATGAATTTCCTTTACATAATTCCCTATTCCTTCTTCTGCCTTAGCTTCTTTCTTTCTCATTCATCCAATTTTTTCTTTTTTTTAAAAAAAAAAAAAAATAGAGCAATAAATTCCTTTTTTTTATGATGCCCAATAAGAGGAGCGGAAAGAAAACAAACGGCAAGTGGAAACACTGTTTGGGTGTTTTATATATTAATTAAAAAAAAAAAAAAAATTCCTCTTATCGGCTTTTGCTTTTGCCTCTCTCTCTTTCACTCTATTGTGCGCCCATGGGCTGCATGTTCTTGCCTCTTCTTCTCCATTTTCTCTCTCTTTTCTCAACTTATTACTTACACTTGCACACAATAACCATCTATTTTCACTTTTTTTTTTCTTTTCTTTTTCCTATTATTAATTGCACTATTGCTGAGTTTTCTATGTCTGTGTGGATTATTGGATTTTATTTTGGGTTGTGCAATGCTTTATTTTTGCTTTGGTTTTAGGGAGAGAAGCGTGTTTGGTGCAGAAACAAGCAATGGCATTCTTCCACATTCCATCTCTTCACCTCAAGGTGTCTCACCTTTTTCCATTCATCCCCATTTCTTTCTTCATGGGTTTTCGTCTGTTTGCCTATCCTTTGCTGCACCAAATCACAGATTATCGTTTTCTGAATTACATTTCGAATAAATGCACCCTATGCTTTTGAGTTTGATACTGATTTCTGTTAGTTCAATATATGAGAAGGAAGATTGCCGCATTGAAAAGATAGAGAGAAACCTCATAACTTATATAAGATACATGAGTTACTGCTTTTATTGTCAATTGGTTTTGAGATGAAACTCCATGTATTCTAATATGATATCAGAACCATCAAGCTCAAACTTGGTCCAAAAATTAAAATTGGGATTCAATCCATTTTTGAGAAATCTCATAATTTAAAAGATGTATAGGTTACTCTTCTCATAATCATTTAATAGTATCAAAGTAGAAGATGATACACTCACATTTATATATATAATGCATTGTTTTCTCCTCAATATTATATGCTATTGCGTCGGATCTGGTATATGTTTAACATGATATATAAGGAAGAGCTTTTCTTGAATTAATATTGATAACACAAGTATATTGAGCACTGTGTAGTGCTTTTATATGCTACTATGATGATGCTAATATTGATAGTCGTTACGAGAAATATACGCCAAACTATCTGCTTAAGCTTTTGGGATTGTTGTGTTTATTTTTTATGTAAGTTATTGGGCGGTGGTGCGAAAGGGAGAAGGCATTTCCGTTAAAGAAGAGAAGAGGGAGCTTCGAGAGGCCAAGTGAAGATCAGATCAACAACAACAAAAACAACGAAGATCAAACCATCACTGTGAAGGCACCGGATCAGAAGAAGACGATGAAGACCAAGAAATGCACCTTGACACAGAAGCAAGAACAACAAGAAGAAGATCAATCCAAACTGGGTCTCAACCTCGCCGGAAAAAAGAAATCGAGAGGCGGTGCGTTAATGGAAGGATCTCGGTGCAGCCGCGTCAATGGAAGAGGATGGCGCTGCTGCCAACAGACTCTCGTCGGTTACTCTCTCTGTGAACATCACTTGGGAAAAGGCCGCCTCCGCAGCATGAACAGCGTCCGCAGCCGCTCCTTGGCTGCTGCCGCTGCACCGAAGAGTGTTATCGCTATTGAGGAAGAACATGAGATGAAGCCATTGCAATTGCCATCTCCACCGCCGCCATTGACGCTGGCTTGTAAGAAGAGAATGAAGCTGGGTGTGGTGAAAGCAAGGTCGATAAGCAGCTTGCTCGGCCAACCCGATGGTGTGATGGCAGCGCCGCCGCCTCCGACTCTACCTCCGACACCGCCGGATGACAACATTGACGAGTAGGAAATTATAATTTCTGATAGTTTTAAAATTTTCAATTTTTACAGTGCAATATGTTGAAAATTTTCAATTACCTTATTTTGTAAAAAAATGGTTGAGGGAAAGTTGATACATCTCTAAATTATTGTTTTATTAATATATTTAGACATTTGGAC

mRNA sequence

CTCCAACAACAAATACCCAAATATCAAAGATAAGACATATACTTCAGTTTTTTCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGCACTCTTTTCGTTTCTGTTTGTTTAGAGGCGATGAGAATCAGAAAGCGGCAGGTCCCATTACCCTTTTCTTCTGTGTCTCCTCTCTCAGATCCCCTCCTCCGCCCGGTGCAACTCCATCGTCCCATCACCACCACCTCCCACGCCGCCGATGCCCCAACGAATCTGCATCTCTACGATTTCGCCGCTCCACACACCAATGCTTTGGAGAAGGATCATCAACAATATCATCAGGCTCCTCATACCAGGGAGAGAAGCGTGTTTGGTGCAGAAACAAGCAATGGCATTCTTCCACATTCCATCTCTTCACCTCAAGTTATTGGGCGGTGGTGCGAAAGGGAGAAGGCATTTCCGTTAAAGAAGAGAAGAGGGAGCTTCGAGAGGCCAAGTGAAGATCAGATCAACAACAACAAAAACAACGAAGATCAAACCATCACTGTGAAGGCACCGGATCAGAAGAAGACGATGAAGACCAAGAAATGCACCTTGACACAGAAGCAAGAACAACAAGAAGAAGATCAATCCAAACTGGGTCTCAACCTCGCCGGAAAAAAGAAATCGAGAGGCGGTGCGTTAATGGAAGGATCTCGGTGCAGCCGCGTCAATGGAAGAGGATGGCGCTGCTGCCAACAGACTCTCGTCGGTTACTCTCTCTGTGAACATCACTTGGGAAAAGGCCGCCTCCGCAGCATGAACAGCGTCCGCAGCCGCTCCTTGGCTGCTGCCGCTGCACCGAAGAGTGTTATCGCTATTGAGGAAGAACATGAGATGAAGCCATTGCAATTGCCATCTCCACCGCCGCCATTGACGCTGGCTTGTAAGAAGAGAATGAAGCTGGGTGTGGTGAAAGCAAGGTCGATAAGCAGCTTGCTCGGCCAACCCGATGGTGTGATGGCAGCGCCGCCGCCTCCGACTCTACCTCCGACACCGCCGGATGACAACATTGACGAGTAGGAAATTATAATTTCTGATAGTTTTAAAATTTTCAATTTTTACAGTGCAATATGTTGAAAATTTTCAATTACCTTATTTTGTAAAAAAATGGTTGAGGGAAAGTTGATACATCTCTAAATTATTGTTTTATTAATATATTTAGACATTTGGAC

Coding sequence (CDS)

ATGAGAATCAGAAAGCGGCAGGTCCCATTACCCTTTTCTTCTGTGTCTCCTCTCTCAGATCCCCTCCTCCGCCCGGTGCAACTCCATCGTCCCATCACCACCACCTCCCACGCCGCCGATGCCCCAACGAATCTGCATCTCTACGATTTCGCCGCTCCACACACCAATGCTTTGGAGAAGGATCATCAACAATATCATCAGGCTCCTCATACCAGGGAGAGAAGCGTGTTTGGTGCAGAAACAAGCAATGGCATTCTTCCACATTCCATCTCTTCACCTCAAGTTATTGGGCGGTGGTGCGAAAGGGAGAAGGCATTTCCGTTAAAGAAGAGAAGAGGGAGCTTCGAGAGGCCAAGTGAAGATCAGATCAACAACAACAAAAACAACGAAGATCAAACCATCACTGTGAAGGCACCGGATCAGAAGAAGACGATGAAGACCAAGAAATGCACCTTGACACAGAAGCAAGAACAACAAGAAGAAGATCAATCCAAACTGGGTCTCAACCTCGCCGGAAAAAAGAAATCGAGAGGCGGTGCGTTAATGGAAGGATCTCGGTGCAGCCGCGTCAATGGAAGAGGATGGCGCTGCTGCCAACAGACTCTCGTCGGTTACTCTCTCTGTGAACATCACTTGGGAAAAGGCCGCCTCCGCAGCATGAACAGCGTCCGCAGCCGCTCCTTGGCTGCTGCCGCTGCACCGAAGAGTGTTATCGCTATTGAGGAAGAACATGAGATGAAGCCATTGCAATTGCCATCTCCACCGCCGCCATTGACGCTGGCTTGTAAGAAGAGAATGAAGCTGGGTGTGGTGAAAGCAAGGTCGATAAGCAGCTTGCTCGGCCAACCCGATGGTGTGATGGCAGCGCCGCCGCCTCCGACTCTACCTCCGACACCGCCGGATGACAACATTGACGAGTAG

Protein sequence

MRIRKRQVPLPFSSVSPLSDPLLRPVQLHRPITTTSHAADAPTNLHLYDFAAPHTNALEKDHQQYHQAPHTRERSVFGAETSNGILPHSISSPQVIGRWCEREKAFPLKKRRGSFERPSEDQINNNKNNEDQTITVKAPDQKKTMKTKKCTLTQKQEQQEEDQSKLGLNLAGKKKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLAAAAAPKSVIAIEEEHEMKPLQLPSPPPPLTLACKKRMKLGVVKARSISSLLGQPDGVMAAPPPPTLPPTPPDDNIDE

Homology

[Close]

BLAST of Tan0019141 vs. NCBI nr
Match: KAG6580802.1 (hypothetical protein SDJN03_20804, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017550.1 hypothetical protein SDJN02_19416 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 332.0 bits (850), Expect = 5.3e-87
Identity = 208/325 (64.00%), Postives = 236/325 (72.62%), Query Frame = 0


Query: 1   MRIRKRQVPLPFSSVS--PLSDPLLR---PVQLHRPITTTSHAADAPTNLHLY--DFAAP 60
           MRIRKRQVPLPFSS+S  PLSDPLLR   PVQLH  + ++      P NLH Y  D AA 
Sbjct: 1   MRIRKRQVPLPFSSLSPLPLSDPLLRRTPPVQLHLQLPSSD-----PPNLHTYACDSAAY 60

Query: 61  HT-NAL-EKDHQQYHQAPHTRERSVFGAETSNGILPHSISSPQV-IGRWCEREKAFPLKK 120
           HT NAL +KD  + H    +RE +VFGAETSNG+LP S SSPQV  G+WCER+K FPLKK
Sbjct: 61  HTNNALGKKDQLEQHD---SRETTVFGAETSNGVLPLSSSSPQVGDGQWCERDKEFPLKK 120

Query: 121 RRGSFERPSEDQINNNKNNEDQTITVKA------PDQKKTMKTKKCTLTQKQEQQEEDQS 180
           RRGSFER S+D  N   N +DQT T  A      PD KKT K KK             Q 
Sbjct: 121 RRGSFERQSDDDQN---NADDQTTTAAAAAMESLPDHKKTTKNKK-------------QP 180

Query: 181 KLGLNLAGKKKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVR 240
           KLGLNLAGKK+SRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMN+VR
Sbjct: 181 KLGLNLAGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVR 240

Query: 241 SRSLAAAAAPKSVIAIEEEHEMKPLQLPSPPPPLTLACKKRMKLGVVKARSISSLLGQPD 300
           SRSLAAAAA K+++ ++++ +  P   P P P LTLA KKR KLG+VKARSISSLLGQPD
Sbjct: 241 SRSLAAAAALKNIVTVDKDEKKPPPCPPPPSPSLTLASKKRTKLGLVKARSISSLLGQPD 299

Query: 301 GVMAAPPPPTLPP---TPPDDNIDE 307
           G+ A PPPP  PP   T P+DNI++
Sbjct: 301 GMAAIPPPP--PPSQSTLPNDNINQ 299

[Close]

BLAST of Tan0019141 vs. NCBI nr
Match: XP_022934290.1 (uncharacterized protein LOC111441497 [Cucurbita moschata])

HSP 1 Score: 324.7 bits (831), Expect = 8.5e-85
Identity = 207/327 (63.30%), Postives = 235/327 (71.87%), Query Frame = 0


Query: 1   MRIRKRQVPLPFSSVS--PLSDPLLR---PVQLHRPITTTSHAADAPTNLHLY--DFAAP 60
           MRIRKRQVPLPFSS+S  PLSDPLLR   PVQLH  + ++      P NLH Y  D AA 
Sbjct: 1   MRIRKRQVPLPFSSLSPLPLSDPLLRRTPPVQLHLQLPSSD-----PPNLHPYACDSAAY 60

Query: 61  HT-NAL-EKDHQQYHQAPHTRERSVFGAETSNGILPHSISSPQV-IGRWCEREKAFPLKK 120
           HT NAL +KD  + H    +RE +VFGAE SNG+LP S SSPQV  G+WCER+K FPLKK
Sbjct: 61  HTNNALGKKDQLEQHD---SRETTVFGAEASNGVLPLSSSSPQVGDGQWCERDKDFPLKK 120

Query: 121 RRGSFERPSEDQINNNKNNEDQTITVKA-------PDQKKTMKTKKCTLTQKQEQQEEDQ 180
           RRGSFER S+D  N   N +DQT T  A       PD KKT K KK             Q
Sbjct: 121 RRGSFERQSDDDQN---NADDQTTTAAAAAAMESLPDHKKTTKNKK-------------Q 180

Query: 181 SKLGLNLAGKKKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSV 240
            KLGLNLAGKK+SRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMN+V
Sbjct: 181 PKLGLNLAGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNV 240

Query: 241 RSRSLAAAAAP-KSVIAIEEEHEMKPLQLPSPPPPLTLACKKRMKLGVVKARSISSLLGQ 300
           RSRSLAAAAA  K+++ ++++ +  P   P P P LTLA KKR KLG+VKARSISSLLGQ
Sbjct: 241 RSRSLAAAAATLKNIVTVDKDEKKPPPCPPPPSPSLTLASKKRTKLGLVKARSISSLLGQ 300

Query: 301 PDGVMAAPPPPTLPP---TPPDDNIDE 307
           PDG+ A PPPP  PP   T P+DNI++
Sbjct: 301 PDGMAAIPPPP--PPSQSTLPNDNINQ 301

[Close]

BLAST of Tan0019141 vs. NCBI nr
Match: XP_023526164.1 (uncharacterized protein LOC111789724 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 324.7 bits (831), Expect = 8.5e-85
Identity = 206/326 (63.19%), Postives = 235/326 (72.09%), Query Frame = 0


Query: 1   MRIRKRQVPLPFSSVS--PLSDPLLR---PVQLHRPITTTSHAADAPTNLHLY--DFAAP 60
           MRIRKRQVPLPFSS+S  PLSDPLLR   PVQLH  + ++      P NLH Y  D AA 
Sbjct: 1   MRIRKRQVPLPFSSLSPLPLSDPLLRRTPPVQLHLQLPSSD-----PPNLHPYACDSAAY 60

Query: 61  HT-NAL-EKDHQQYHQAPHTRERSVFGAETSNGILPHSISSPQVI-GRWCEREKAFPLKK 120
           HT NAL +KD  + H    +RE +VFGAETSNG+LP S SSPQV  G+WCER+K FPLKK
Sbjct: 61  HTNNALGKKDQLEQHD---SRETTVFGAETSNGVLPLSSSSPQVCDGQWCERDKEFPLKK 120

Query: 121 RRGSFERPSEDQINNNKNNEDQTITVKA-----PDQKKTMKTKKCTLTQKQEQQEEDQSK 180
           RRGSFER S+D  N   N +DQT T  A     PD KKT K KK             Q K
Sbjct: 121 RRGSFERQSDDDQN---NADDQTTTTAAAMESLPDHKKTTKNKK-------------QPK 180

Query: 181 LGLNLAGKKKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRS 240
           LGLNLAGKK+SRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMN+VRS
Sbjct: 181 LGLNLAGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRS 240

Query: 241 RSLAAAAAP--KSVIAIEEEHEMKPLQLPSPPPPLTLACKKRMKLGVVKARSISSLLGQP 300
           RSL+AAAA   K+++ ++++ +  P   P P P LTLA KKR KLG+VKARSISSLLGQP
Sbjct: 241 RSLSAAAAATLKNIVTVDKDEKKPPPCPPPPSPSLTLASKKRTKLGLVKARSISSLLGQP 300

Query: 301 DGVMAAPPPPTLPP---TPPDDNIDE 307
           D + A PPPP  PP   T P+DNI++
Sbjct: 301 DSMAAIPPPP--PPSQSTLPNDNINQ 300

[Close]

BLAST of Tan0019141 vs. NCBI nr
Match: XP_022983045.1 (uncharacterized protein LOC111481709 isoform X1 [Cucurbita maxima])

HSP 1 Score: 316.6 bits (810), Expect = 2.3e-82
Identity = 199/318 (62.58%), Postives = 229/318 (72.01%), Query Frame = 0


Query: 1   MRIRKRQVPLPFSSVS--PLSDPLLR---PVQLHRPITTTSHAADAPTNLHLY--DFAAP 60
           MRIRKRQVPL FSS+S  PLSDPLLR   PVQLH  + ++      P NLH Y  D AA 
Sbjct: 1   MRIRKRQVPLSFSSLSPLPLSDPLLRRTPPVQLHLQLPSSD-----PPNLHPYACDSAAD 60

Query: 61  HT-NAL-EKDHQQYHQAPHTRERSVFGAETSNGILPHSISSPQV-IGRWCEREKAFPLKK 120
           HT NAL +KD  + H    +RE +VFGAETSNG+LP S SSPQV  G+WCER+K FPLKK
Sbjct: 61  HTNNALGKKDQLEQHD---SRETTVFGAETSNGVLPLSSSSPQVGDGQWCERDKEFPLKK 120

Query: 121 RRGSFERPSEDQINNNKNNEDQTITVKAPDQKKTMKTKKCTLTQKQEQQEEDQSKLGLNL 180
           RRGSFER S+D   NN +++  T      D KKT K KK             Q KLGLNL
Sbjct: 121 RRGSFERQSDDD-QNNADDQTTTAMESLQDHKKTTKNKK-------------QPKLGLNL 180

Query: 181 AGKKKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLAA 240
           AGKK+SRGGALMEGS CSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMN+VRSRSLAA
Sbjct: 181 AGKKRSRGGALMEGSLCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRSRSLAA 240

Query: 241 AAAP-KSVIAIEEEHEMKPLQLPSPPPPLTLACKKRMKLGVVKARSISSLLGQPDGVMAA 300
           AAA  K+++ ++++ +  P   P P P LTLA KKR KLG+VKARSISSLLGQPDG+ A 
Sbjct: 241 AAATLKNIVTVDKDEKKPPPCPPPPSPSLTLASKKRTKLGLVKARSISSLLGQPDGMAAI 296

Query: 301 PP-PPTLPPTPPDDNIDE 307
           PP PP    T P+DNI++
Sbjct: 301 PPSPPPSQSTLPNDNINQ 296

[Close]

BLAST of Tan0019141 vs. NCBI nr
Match: XP_038903168.1 (uncharacterized protein LOC120089834 [Benincasa hispida])

HSP 1 Score: 313.5 bits (802), Expect = 2.0e-81
Identity = 199/321 (61.99%), Postives = 235/321 (73.21%), Query Frame = 0


Query: 1   MRIRKRQVPLPFSSVSPLSDPLLRPVQLHRPITTTSHAADAPTNLHLYDFAAPHTNALEK 60
           MRIRKRQ+PLPFSS   LSDPLLR    H P      ++D P NLH +    P  NA + 
Sbjct: 1   MRIRKRQLPLPFSS---LSDPLLR----HSPPVQLPPSSD-PPNLHPF----PSDNASD- 60

Query: 61  DHQQYHQAPHTRERSVFGAET-SNGILPHSI-SSPQVIGRWCEREKAFPLKKRRGSFERP 120
           ++Q+ HQ   +R+ +V GAET +NG+LP S  SS Q  GRWCEREKAFPLKKRRGSFER 
Sbjct: 61  NNQKLHQ-HDSRKTTVIGAETINNGVLPLSTSSSSQGGGRWCEREKAFPLKKRRGSFERS 120

Query: 121 SEDQINNNKNNEDQ------TITVK-APDQKKTMKTKKCTLTQKQEQQEEDQSKLGLNLA 180
           + DQ +N+++++++      T TVK  PD+KKTMKTK   + +K     + Q+KLGL+L 
Sbjct: 121 NNDQDDNDEDDDEEDDQVVTTSTVKLLPDEKKTMKTK---MNKKSTLSSQKQTKLGLDLV 180

Query: 181 GKKKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLAAA 240
           GKK+SRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMN+VRSRSLAAA
Sbjct: 181 GKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRSRSLAAA 240

Query: 241 AAPKSVIAIEEEHEMKPLQLPSPPPP---LTLACKKRMKLGVVKARSISSLLGQPDGVMA 300
            A    + ++ E E KP   P P PP   LTLA KKRMKLGVVKARSISSLLGQPDG++A
Sbjct: 241 TATPKNVVVDVEDEKKPSPSPFPAPPSSSLTLASKKRMKLGVVKARSISSLLGQPDGMVA 300

Query: 301 APPPPTLPPTPP---DDNIDE 307
            PPPP  PP PP   DDNID+
Sbjct: 301 TPPPP--PPPPPMVHDDNIDD 302

[Close]

BLAST of Tan0019141 vs. ExPASy TrEMBL
Match: A0A6J1F795 (Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111441497 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 4.1e-85
Identity = 207/327 (63.30%), Postives = 235/327 (71.87%), Query Frame = 0


Query: 1   MRIRKRQVPLPFSSVS--PLSDPLLR---PVQLHRPITTTSHAADAPTNLHLY--DFAAP 60
           MRIRKRQVPLPFSS+S  PLSDPLLR   PVQLH  + ++      P NLH Y  D AA 
Sbjct: 1   MRIRKRQVPLPFSSLSPLPLSDPLLRRTPPVQLHLQLPSSD-----PPNLHPYACDSAAY 60

Query: 61  HT-NAL-EKDHQQYHQAPHTRERSVFGAETSNGILPHSISSPQV-IGRWCEREKAFPLKK 120
           HT NAL +KD  + H    +RE +VFGAE SNG+LP S SSPQV  G+WCER+K FPLKK
Sbjct: 61  HTNNALGKKDQLEQHD---SRETTVFGAEASNGVLPLSSSSPQVGDGQWCERDKDFPLKK 120

Query: 121 RRGSFERPSEDQINNNKNNEDQTITVKA-------PDQKKTMKTKKCTLTQKQEQQEEDQ 180
           RRGSFER S+D  N   N +DQT T  A       PD KKT K KK             Q
Sbjct: 121 RRGSFERQSDDDQN---NADDQTTTAAAAAAMESLPDHKKTTKNKK-------------Q 180

Query: 181 SKLGLNLAGKKKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSV 240
            KLGLNLAGKK+SRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMN+V
Sbjct: 181 PKLGLNLAGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNV 240

Query: 241 RSRSLAAAAAP-KSVIAIEEEHEMKPLQLPSPPPPLTLACKKRMKLGVVKARSISSLLGQ 300
           RSRSLAAAAA  K+++ ++++ +  P   P P P LTLA KKR KLG+VKARSISSLLGQ
Sbjct: 241 RSRSLAAAAATLKNIVTVDKDEKKPPPCPPPPSPSLTLASKKRTKLGLVKARSISSLLGQ 300

Query: 301 PDGVMAAPPPPTLPP---TPPDDNIDE 307
           PDG+ A PPPP  PP   T P+DNI++
Sbjct: 301 PDGMAAIPPPP--PPSQSTLPNDNINQ 301

[Close]

BLAST of Tan0019141 vs. ExPASy TrEMBL
Match: A0A6J1J4K8 (Growth-regulating factor OS=Cucurbita maxima OX=3661 GN=LOC111481709 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 1.1e-82
Identity = 199/318 (62.58%), Postives = 229/318 (72.01%), Query Frame = 0


Query: 1   MRIRKRQVPLPFSSVS--PLSDPLLR---PVQLHRPITTTSHAADAPTNLHLY--DFAAP 60
           MRIRKRQVPL FSS+S  PLSDPLLR   PVQLH  + ++      P NLH Y  D AA 
Sbjct: 1   MRIRKRQVPLSFSSLSPLPLSDPLLRRTPPVQLHLQLPSSD-----PPNLHPYACDSAAD 60

Query: 61  HT-NAL-EKDHQQYHQAPHTRERSVFGAETSNGILPHSISSPQV-IGRWCEREKAFPLKK 120
           HT NAL +KD  + H    +RE +VFGAETSNG+LP S SSPQV  G+WCER+K FPLKK
Sbjct: 61  HTNNALGKKDQLEQHD---SRETTVFGAETSNGVLPLSSSSPQVGDGQWCERDKEFPLKK 120

Query: 121 RRGSFERPSEDQINNNKNNEDQTITVKAPDQKKTMKTKKCTLTQKQEQQEEDQSKLGLNL 180
           RRGSFER S+D   NN +++  T      D KKT K KK             Q KLGLNL
Sbjct: 121 RRGSFERQSDDD-QNNADDQTTTAMESLQDHKKTTKNKK-------------QPKLGLNL 180

Query: 181 AGKKKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLAA 240
           AGKK+SRGGALMEGS CSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMN+VRSRSLAA
Sbjct: 181 AGKKRSRGGALMEGSLCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRSRSLAA 240

Query: 241 AAAP-KSVIAIEEEHEMKPLQLPSPPPPLTLACKKRMKLGVVKARSISSLLGQPDGVMAA 300
           AAA  K+++ ++++ +  P   P P P LTLA KKR KLG+VKARSISSLLGQPDG+ A 
Sbjct: 241 AAATLKNIVTVDKDEKKPPPCPPPPSPSLTLASKKRTKLGLVKARSISSLLGQPDGMAAI 296

Query: 301 PP-PPTLPPTPPDDNIDE 307
           PP PP    T P+DNI++
Sbjct: 301 PPSPPPSQSTLPNDNINQ 296

[Close]

BLAST of Tan0019141 vs. ExPASy TrEMBL
Match: A0A1S3B7U9 (Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103486754 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 2.1e-76
Identity = 189/315 (60.00%), Postives = 228/315 (72.38%), Query Frame = 0


Query: 1   MRIRKRQVPLPFSSVSPLSDPLLRPVQLHRPITTTSHAADAPTNLHLYDFAAPHTNALEK 60
           MRIRKRQ+PLP  + S LSDP   PVQLH P  ++S ++D P N         + N  +K
Sbjct: 1   MRIRKRQLPLP--AFSSLSDP---PVQLHLP--SSSSSSDPPIN------PLDNNNQKQK 60

Query: 61  DHQQYHQAPHTRERSVFGAET-SNGILPHSISSPQVIGRWCEREKAFPLKKRRGSFERPS 120
             QQY     +RE  + GAET +N +LPHS SS Q  GRWCE+EKAFPLKKRRGSFER S
Sbjct: 61  LLQQY----DSRETILIGAETINNALLPHSSSSSQGGGRWCEKEKAFPLKKRRGSFERSS 120

Query: 121 EDQINNNKNNEDQTITVKAPDQKKTMKT---KKCTLTQKQEQQEEDQSKLGLNL-AGKKK 180
           ++  +N+ +N+D  +  K  D+KK +KT   KKCTL+QK       QSK+GL++  GKK+
Sbjct: 121 DE--DNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQK-------QSKVGLDIVVGKKR 180

Query: 181 SRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLAAAAAPK 240
           SRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMN+VR+RSL AAA PK
Sbjct: 181 SRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL-AAATPK 240

Query: 241 SVIAIE-EEHEMKPLQLPSPPPP---LTLACKKRMKLGVVKARSISSLLGQPDGVMAAPP 300
           +++ IE +E +  P Q PS PPP    +L  KKRMKLGVVKARSISSLLGQPDG++A   
Sbjct: 241 NIVVIEKDEKKPSPSQFPSSPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVAT-- 286

Query: 301 PPTLPPTPPDDNIDE 307
           P +LP T  DDNID+
Sbjct: 301 PLSLPSTLHDDNIDK 286

[Close]

BLAST of Tan0019141 vs. ExPASy TrEMBL
Match: A0A6J1EWY8 (Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111436877 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 4.6e-76
Identity = 184/308 (59.74%), Postives = 198/308 (64.29%), Query Frame = 0


Query: 1   MRIRKRQVPLPF---SSVSPLSDPLLRPVQLHRPITTTSHAADAPTNLHLYDFAAPHTNA 60
           MRIRKRQ+PLP    S   P+SDPL              HA   PT           +N 
Sbjct: 1   MRIRKRQLPLPLAFSSGPRPVSDPL--------------HAHAPPT----------VSNP 60

Query: 61  LEKDHQQYHQAPHTRERSVFGAETSNGILPHSISSPQVIGRWCEREKAFPLKKRRGSFER 120
           +EK+ QQ H   +TRER  F AETSNG++P S SSPQV+GRW ERE+ FPLKKRR     
Sbjct: 61  MEKE-QQEHIEDNTRERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRR----- 120

Query: 121 PSEDQINNNKNNEDQTITVKAPDQKKTMKTKKCTLTQKQEQQEEDQSKLGLNLAGKKKSR 180
              D  NNN N              K MK K          QEE QSK+GLNLAGK+KSR
Sbjct: 121 --SDDHNNNGN--------------KKMKKK----------QEEHQSKMGLNLAGKRKSR 180

Query: 181 GGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLAAAAAPKSV 240
           GGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRS AA       
Sbjct: 181 GGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSSAAT------ 240

Query: 241 IAIEEEHEMKPLQLPSPPPPLTLACKKRMKLGVVKARSISSLLGQPDGVMAAPPPPTLPP 300
             +E+E   KP   PSP PPLTL  KKR KLGVVKARSISSLLGQPD VMA  PPP LPP
Sbjct: 241 -VVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDSVMALAPPPPLPP 245

Query: 301 TPPDDNID 306
           TPPDDNID
Sbjct: 301 TPPDDNID 245

[Close]

BLAST of Tan0019141 vs. ExPASy TrEMBL
Match: A0A5A7TKD1 (Growth-regulating factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00710 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 7.8e-76
Identity = 190/323 (58.82%), Postives = 230/323 (71.21%), Query Frame = 0


Query: 1   MRIRKRQVPLPFSSVSPLSDPLLRPVQLHRPITTTSHAADAPTNLHLYDFAAPHTNALEK 60
           MRIRKRQ+PLP  + S LSDP   PVQLH P  ++S ++D P N         + N  +K
Sbjct: 1   MRIRKRQLPLP--AFSSLSDP---PVQLHLP--SSSSSSDPPIN------PLDNNNQKQK 60

Query: 61  DHQQYHQAPHTRERSVFGAET-SNGILPHSISSPQVI--------GRWCEREKAFPLKKR 120
             QQY     +RE  + GAET +N +LPHS SS QV+        GRWCE+EKAFPLKKR
Sbjct: 61  LLQQY----DSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKR 120

Query: 121 RGSFERPSEDQINNNKNNEDQTITVKAPDQKKTMKT---KKCTLTQKQEQQEEDQSKLGL 180
           RGSFER S++  +N+ +N+D  +  K  D+KK +KT   KKCTL+QK       QSK+GL
Sbjct: 121 RGSFERSSDE--DNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQK-------QSKVGL 180

Query: 181 NL-AGKKKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRS 240
           ++  GKK+SRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMN+VR+RS
Sbjct: 181 DIVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRS 240

Query: 241 LAAAAAPKSVIAIE-EEHEMKPLQLPSPPPP---LTLACKKRMKLGVVKARSISSLLGQP 300
           L AAA PK+++ IE +E +  P Q PS PPP    +L  KKRMKLGVVKARSISSLLGQP
Sbjct: 241 L-AAATPKNIVVIEKDEKKPSPSQFPSSPPPPSSFSLTNKKRMKLGVVKARSISSLLGQP 294

Query: 301 DGVMAAPPPPTLPPTPPDDNIDE 307
           DG++A   P +LP T  DDNID+
Sbjct: 301 DGIVAT--PLSLPSTLHDDNIDK 294

[Close]

BLAST of Tan0019141 vs. TAIR 10
Match: AT2G42040.1 (CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 120.9 bits (302), Expect = 1.7e-27
Identity = 111/304 (36.51%), Postives = 137/304 (45.07%), Query Frame = 0


Query: 1   MRIRKRQVPLPFSSVSPLSDPLLRPVQLHRPITTTSH-----AADAPTNLHLYDFAAPHT 60
           MRIRKRQVPLP SS+ P+    L  +  +R  T T+        D   +      + P  
Sbjct: 1   MRIRKRQVPLPLSSLLPVP---LSDLYFNRSPTATARYFRGGYKDGGDDFGSLQLSLPPP 60

Query: 61  NALEKDHQQYHQAPHTRE-------------RSVFGAETSNGILP--HSISSPQVIGRWC 120
           + +     Q        E             +S   A  S  + P   S+SS QV+ +  
Sbjct: 61  SQISDRLIQRDLIKKKEEVKALDDDNGDVDVKSRTDASGSKNVNPRGESVSSIQVVEK-- 120

Query: 121 EREKAFPLKKRRGSFERPSEDQINNNKNNEDQTITVKAPDQKKTMKTKKCTLTQKQEQQE 180
             EK   L+KRRG              N ED                       + E+ E
Sbjct: 121 -NEKVVSLRKRRGFI------------NFED----------------------YEDEEDE 180

Query: 181 EDQSKLGLNLAGKKKSR--GGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLR 240
           E     G    GKKK++  GG L EGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGR+R
Sbjct: 181 EASGGGGRINKGKKKAKKSGGGLEEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRVR 240

Query: 241 SMNSVRSRSLAAAAAPKSVIAIEEEHEMKPLQLPSPPPPLTLACKKRMKLGVVKARSISS 283
           SMN    +S       K  + +E +                   KKR+KLG+VKARSISS
Sbjct: 241 SMN----KSGGGRGGEKKAVVVEVK-------------------KKRVKLGMVKARSISS 241

[Close]

BLAST of Tan0019141 vs. TAIR 10
Match: AT5G53660.1 (growth-regulating factor 7 )

HSP 1 Score: 43.5 bits (101), Expect = 3.5e-04
Identity = 17/42 (40.48%), Postives = 25/42 (59.52%), Query Frame = 0


Query: 182 MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSV 224
           +E  RC R +G+ WRC ++ +  +  CE HL +GR RS   V
Sbjct: 108 LEPGRCRRTDGKKWRCAKEVVSNHKYCEKHLHRGRPRSRKHV 149

The following BLAST results are available for this feature:

BLAST of Tan0019141 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0019141 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6580802.1	5.3e-87	64.00	hypothetical protein SDJN03_20804, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022934290.1	8.5e-85	63.30	uncharacterized protein LOC111441497 [Cucurbita moschata]	[more]
XP_023526164.1	8.5e-85	63.19	uncharacterized protein LOC111789724 [Cucurbita pepo subsp. pepo]	[more]
XP_022983045.1	2.3e-82	62.58	uncharacterized protein LOC111481709 isoform X1 [Cucurbita maxima]	[more]
XP_038903168.1	2.0e-81	61.99	uncharacterized protein LOC120089834 [Benincasa hispida]	[more]

BLAST of Tan0019141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F795	4.1e-85	63.30	Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111441497 PE=3 SV=1	[more]
A0A6J1J4K8	1.1e-82	62.58	Growth-regulating factor OS=Cucurbita maxima OX=3661 GN=LOC111481709 PE=3 SV=1	[more]
A0A1S3B7U9	2.1e-76	60.00	Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103486754 PE=3 SV=1	[more]
A0A6J1EWY8	4.6e-76	59.74	Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111436877 PE=3 SV=1	[more]
A0A5A7TKD1	7.8e-76	58.82	Growth-regulating factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Tan0019141 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42040.1	1.7e-27	36.51	CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 ...	[more]
AT5G53660.1	3.5e-04	40.48	growth-regulating factor 7	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014977	WRC domain	PFAM	PF08879	WRC	coord: 120..160 e-value: 1.6E-15 score: 56.5
IPR014977	WRC domain	PROSITE	PS51667	WRC	coord: 118..162 score: 21.619141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..117
None	No IPR available	PANTHER	PTHR31602:SF19	OS02G0773600 PROTEIN	coord: 11..224
IPR031137	Growth-regulating factor	PANTHER	PTHR31602	FAMILY NOT NAMED	coord: 11..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0019141.1	Tan0019141.1	mRNA
Tan0019141.2	Tan0019141.2	mRNA
Tan0019141.3	Tan0019141.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding