Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACTTCTCGCTTACTCAATCATCTTCTTCTCCTTCTCTGCTTTGTCGCCACCGCCGCCGCCGCAGAAGCAGTATCAACGCGCCGCCCTGGATTTCTCTTCTCAAGAACCAGAGGAAGATGCACACCACAGTAAGATCTCCATTTCCTTTCCCAAAATATACATTCAAACACACGCATTATTCAACGAGGCTGCAAAATTAGGTCGAAATCGATTGAGATTTTCTCGTAGACATTTTCACAAACACATCGACGCATTTACATTAGATTAGATTAGATTAGGTTTTGTTTTCTGTCATCGATCGGATTGAGATCGATTCGATTATTTGAACCGTCCAGATTCTGGAGTAGTAGGAGAGAGGGCTGGCCAAGAATGGCGCCGGAATCCGCAACGGTGGCGAAGATTTTCGGATCCAGAGCTCACGAACGGTACGGATCCGAGATGACGTTAATGGAGGCGGTGGCGGTGGCGGGTGAGGAAGAGGAGGCGTTCAGTAGAGTTTTGAAGGAGGCAACTGCAGCATTGTTGAATTCGTATGCGAGAAAAAGGGAGTTTCCATATTCATCATGGGAGGTGAAGACATTGTTCATCAAAGCTCTGGTGTCTAAAGAGGCTGCTGCTCTTCAGTCTCAACATTTTGCTCTTGCTAATGAGTTCTGTAATTAA
mRNA sequence
ATGGAGACTTCTCGCTTACTCAATCATCTTCTTCTCCTTCTCTGCTTTGTCGCCACCGCCGCCGCCGCAGAAGCAGTATCAACGCGCCGCCCTGGATTTCTCTTCTCAAGAACCAGAGGAAGATGCACACCACAATTCTGGAGTAGTAGGAGAGAGGGCTGGCCAAGAATGGCGCCGGAATCCGCAACGGTGGCGAAGATTTTCGGATCCAGAGCTCACGAACGGTACGGATCCGAGATGACGTTAATGGAGGCGGTGGCGGTGGCGGGTGAGGAAGAGGAGGCGTTCAGTAGAGTTTTGAAGGAGGCAACTGCAGCATTGTTGAATTCGTATGCGAGAAAAAGGGAGTTTCCATATTCATCATGGGAGGTGAAGACATTGTTCATCAAAGCTCTGGTGTCTAAAGAGGCTGCTGCTCTTCAGTCTCAACATTTTGCTCTTGCTAATGAGTTCTGTAATTAA
Coding sequence (CDS)
ATGGAGACTTCTCGCTTACTCAATCATCTTCTTCTCCTTCTCTGCTTTGTCGCCACCGCCGCCGCCGCAGAAGCAGTATCAACGCGCCGCCCTGGATTTCTCTTCTCAAGAACCAGAGGAAGATGCACACCACAATTCTGGAGTAGTAGGAGAGAGGGCTGGCCAAGAATGGCGCCGGAATCCGCAACGGTGGCGAAGATTTTCGGATCCAGAGCTCACGAACGGTACGGATCCGAGATGACGTTAATGGAGGCGGTGGCGGTGGCGGGTGAGGAAGAGGAGGCGTTCAGTAGAGTTTTGAAGGAGGCAACTGCAGCATTGTTGAATTCGTATGCGAGAAAAAGGGAGTTTCCATATTCATCATGGGAGGTGAAGACATTGTTCATCAAAGCTCTGGTGTCTAAAGAGGCTGCTGCTCTTCAGTCTCAACATTTTGCTCTTGCTAATGAGTTCTGTAATTAA
Protein sequence
METSRLLNHLLLLLCFVATAAAAEAVSTRRPGFLFSRTRGRCTPQFWSSRREGWPRMAPESATVAKIFGSRAHERYGSEMTLMEAVAVAGEEEEAFSRVLKEATAALLNSYARKREFPYSSWEVKTLFIKALVSKEAAALQSQHFALANEFCN
Homology
BLAST of Tan0019139 vs. NCBI nr
Match:
XP_038899192.1 (uncharacterized protein LOC120086555 [Benincasa hispida])
HSP 1 Score: 241.1 bits (614), Expect = 6.2e-60
Identity = 130/158 (82.28%), Postives = 136/158 (86.08%), Query Frame = 0
Query: 1 METSRLLNHLLLLLCFV-ATAAAAEAVSTRRPGFLFSRTRGRCTPQFWSSRREGWPRMAP 60
M++SRL N LLLLLCF A A AAEA STRRPGFLFSRTRGRCT QFWSS RE WPRMAP
Sbjct: 1 MDSSRLFNLLLLLLCFAGAVAVAAEAGSTRRPGFLFSRTRGRCTAQFWSSGREAWPRMAP 60
Query: 61 ESATVAKIFGSRAHERYGSEMTLMEA----VAVAGEEEEAFSRVLKEATAALLNSYARKR 120
ESATVAKIFGSRAHERYGSEMTLMEA VA A EEEEAF RV+KEAT ALLNSYAR+R
Sbjct: 61 ESATVAKIFGSRAHERYGSEMTLMEAAAATVAAADEEEEAFGRVVKEATVALLNSYARRR 120
Query: 121 EFPYSSWEVKTLFIKALVSKEAAALQSQHFALANEFCN 154
EFPYS+WEVKTLFIKALVSKEAA LQS+ FA ANE CN
Sbjct: 121 EFPYSAWEVKTLFIKALVSKEAAVLQSRRFAFANESCN 158
BLAST of Tan0019139 vs. NCBI nr
Match:
XP_004148954.1 (uncharacterized protein LOC101220310 [Cucumis sativus] >KGN44734.1 hypothetical protein Csa_015820 [Cucumis sativus])
HSP 1 Score: 229.9 bits (585), Expect = 1.4e-56
Identity = 125/154 (81.17%), Postives = 130/154 (84.42%), Query Frame = 0
Query: 1 METSRLLNHLLLLLCFVATAAAAEAVSTRRPGFLFSRTRGRCTPQFWSSRREGWPRMAPE 60
M++SR LN LLLLLCF AA AE S RRPGFLFSRT GRCT QFWSSR E WPRMAPE
Sbjct: 1 MDSSRFLN-LLLLLCF--AAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPE 60
Query: 61 SATVAKIFGSRAHERYGSEMTLMEAVAVAG-EEEEAFSRVLKEATAALLNSYARKREFPY 120
SATVAKIFGSRAHERYGSEMTLMEA A AG EEEE F RV+KEATAALLNSY R+R FPY
Sbjct: 61 SATVAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPY 120
Query: 121 SSWEVKTLFIKALVSKEAAALQSQHFALANEFCN 154
S+WEVKTLFIKALVSKEAA LQSQ FA ANE CN
Sbjct: 121 SAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN 151
BLAST of Tan0019139 vs. NCBI nr
Match:
XP_022953859.1 (uncharacterized protein LOC111456270 [Cucurbita moschata])
HSP 1 Score: 229.9 bits (585), Expect = 1.4e-56
Identity = 125/157 (79.62%), Postives = 135/157 (85.99%), Query Frame = 0
Query: 1 METSRLLNHLLLLLCFVATAAAAEAVSTRRPGFLFSRTRGRCTPQFWSSRREGWPRMAPE 60
MET RLL++LLLL + ATAAA EA +RRPGFLFSRTRGRCTP+FWSSRRE WPRMAPE
Sbjct: 1 METFRLLSYLLLL--YFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPE 60
Query: 61 SATVAKIFGSRAHERYGSEMTLMEAVAVA----GEEEEAFSRVLKEATAALLNSYARKRE 120
SATVAKIFGSRAHERYGSEMTL+ A VA EEEEAF RV+KEATAALLNSYAR R+
Sbjct: 61 SATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGRVVKEATAALLNSYAR-RD 120
Query: 121 FPYSSWEVKTLFIKALVSKEAAALQSQHFALANEFCN 154
FPY++WEVKTL IKALVSKEAAALQSQ FA ANE CN
Sbjct: 121 FPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN 154
BLAST of Tan0019139 vs. NCBI nr
Match:
XP_023548905.1 (uncharacterized protein LOC111807417 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 226.5 bits (576), Expect = 1.6e-55
Identity = 124/157 (78.98%), Postives = 133/157 (84.71%), Query Frame = 0
Query: 1 METSRLLNHLLLLLCFVATAAAAEAVSTRRPGFLFSRTRGRCTPQFWSSRREGWPRMAPE 60
MET RLL++LLLL + ATAAA EA +R PGFLFSRTRGRCTP+FWSSRRE WPRMAPE
Sbjct: 1 METFRLLSYLLLL--YFATAAAGEAALSRPPGFLFSRTRGRCTPEFWSSRREAWPRMAPE 60
Query: 61 SATVAKIFGSRAHERYGSEMTLMEAVAVA----GEEEEAFSRVLKEATAALLNSYARKRE 120
SATVAKIFGSRAHERYGSEMTL+ A VA EEEEAF RV+KEATAALLNSYAR R+
Sbjct: 61 SATVAKIFGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYAR-RD 120
Query: 121 FPYSSWEVKTLFIKALVSKEAAALQSQHFALANEFCN 154
FPYS+WEVKTL IKALVSKEAAALQS FA ANE CN
Sbjct: 121 FPYSAWEVKTLLIKALVSKEAAALQSHRFAFANESCN 154
BLAST of Tan0019139 vs. NCBI nr
Match:
KAG6576062.1 (hypothetical protein SDJN03_26701, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 219.2 bits (557), Expect = 2.5e-53
Identity = 123/157 (78.34%), Postives = 131/157 (83.44%), Query Frame = 0
Query: 1 METSRLLNHLLLLLCFVATAAAAEAVSTRRPGFLFSRTRGRCTPQFWSSRREGWPRMAPE 60
MET RLL+ L LL F A AAA EA +RRPGFLFSRTRGRCTP+FWSSRRE WPRM PE
Sbjct: 1 MET-RLLS-FLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPE 60
Query: 61 SATVAKIFGSRAHERYGSEMTLMEAVAVA----GEEEEAFSRVLKEATAALLNSYARKRE 120
SATVAKIFGSRAHERYG+EMTL+ A VA EEEEAF RV+KEATAALLNSYAR R+
Sbjct: 61 SATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYAR-RD 120
Query: 121 FPYSSWEVKTLFIKALVSKEAAALQSQHFALANEFCN 154
FPYS+WEVKTL IKALVSKEAAALQSQ FA ANE CN
Sbjct: 121 FPYSAWEVKTLLIKALVSKEAAALQSQRFAFANESCN 154
BLAST of Tan0019139 vs. ExPASy TrEMBL
Match:
A0A0A0K735 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375760 PE=4 SV=1)
HSP 1 Score: 229.9 bits (585), Expect = 6.9e-57
Identity = 125/154 (81.17%), Postives = 130/154 (84.42%), Query Frame = 0
Query: 1 METSRLLNHLLLLLCFVATAAAAEAVSTRRPGFLFSRTRGRCTPQFWSSRREGWPRMAPE 60
M++SR LN LLLLLCF AA AE S RRPGFLFSRT GRCT QFWSSR E WPRMAPE
Sbjct: 1 MDSSRFLN-LLLLLCF--AAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPE 60
Query: 61 SATVAKIFGSRAHERYGSEMTLMEAVAVAG-EEEEAFSRVLKEATAALLNSYARKREFPY 120
SATVAKIFGSRAHERYGSEMTLMEA A AG EEEE F RV+KEATAALLNSY R+R FPY
Sbjct: 61 SATVAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPY 120
Query: 121 SSWEVKTLFIKALVSKEAAALQSQHFALANEFCN 154
S+WEVKTLFIKALVSKEAA LQSQ FA ANE CN
Sbjct: 121 SAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN 151
BLAST of Tan0019139 vs. ExPASy TrEMBL
Match:
A0A6J1GR22 (uncharacterized protein LOC111456270 OS=Cucurbita moschata OX=3662 GN=LOC111456270 PE=4 SV=1)
HSP 1 Score: 229.9 bits (585), Expect = 6.9e-57
Identity = 125/157 (79.62%), Postives = 135/157 (85.99%), Query Frame = 0
Query: 1 METSRLLNHLLLLLCFVATAAAAEAVSTRRPGFLFSRTRGRCTPQFWSSRREGWPRMAPE 60
MET RLL++LLLL + ATAAA EA +RRPGFLFSRTRGRCTP+FWSSRRE WPRMAPE
Sbjct: 1 METFRLLSYLLLL--YFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPE 60
Query: 61 SATVAKIFGSRAHERYGSEMTLMEAVAVA----GEEEEAFSRVLKEATAALLNSYARKRE 120
SATVAKIFGSRAHERYGSEMTL+ A VA EEEEAF RV+KEATAALLNSYAR R+
Sbjct: 61 SATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGRVVKEATAALLNSYAR-RD 120
Query: 121 FPYSSWEVKTLFIKALVSKEAAALQSQHFALANEFCN 154
FPY++WEVKTL IKALVSKEAAALQSQ FA ANE CN
Sbjct: 121 FPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN 154
BLAST of Tan0019139 vs. ExPASy TrEMBL
Match:
A0A6J1JR18 (uncharacterized protein LOC111488125 OS=Cucurbita maxima OX=3661 GN=LOC111488125 PE=4 SV=1)
HSP 1 Score: 219.2 bits (557), Expect = 1.2e-53
Identity = 123/157 (78.34%), Postives = 131/157 (83.44%), Query Frame = 0
Query: 1 METSRLLNHLLLLLCFVATAAAAEAVSTRRPGFLFSRTRGRCTPQFWSSRREGWPRMAPE 60
MET RLL+ LLLL AAA EA +RRPGFLFSRTRGRCTP+FWSSRRE WPRMAPE
Sbjct: 1 MET-RLLSFLLLL---YFAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPE 60
Query: 61 SATVAKIFGSRAHERYGSEMTLMEAVAVA----GEEEEAFSRVLKEATAALLNSYARKRE 120
SATVAKIFGSRAHERYGSEMTL+ A VA EEEEAF RV+KEATAALLNSYAR R+
Sbjct: 61 SATVAKIFGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYAR-RD 120
Query: 121 FPYSSWEVKTLFIKALVSKEAAALQSQHFALANEFCN 154
FPY++WEVKTL IKALVSKEAAALQSQ FA ANE CN
Sbjct: 121 FPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN 152
BLAST of Tan0019139 vs. ExPASy TrEMBL
Match:
A0A6J1CRA8 (uncharacterized protein LOC111013459 OS=Momordica charantia OX=3673 GN=LOC111013459 PE=4 SV=1)
HSP 1 Score: 215.3 bits (547), Expect = 1.8e-52
Identity = 116/153 (75.82%), Postives = 126/153 (82.35%), Query Frame = 0
Query: 1 METSRLLNHLLLLLCFVATAAAAEAVSTRRPGFLFSRTRGRCTPQFWSSRREGWPRMAPE 60
MET R LN LLLLLCF + A A S RRPGFLFSR RGRCT QFWSSRRE WPRMAPE
Sbjct: 1 METPRFLN-LLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPE 60
Query: 61 SATVAKIFGSRAHERYGSEMTLMEAVAVAGEEEEAFSRVLKEATAALLNSYARKREFPYS 120
+ATVAK+FGSRA ERYGSEMTLMEA A A +EAF R++KEATAALLNSY R REFP S
Sbjct: 61 TATVAKVFGSRARERYGSEMTLMEAAATA--RDEAFGRLVKEATAALLNSYGR-REFPLS 120
Query: 121 SWEVKTLFIKALVSKEAAALQSQHFALANEFCN 154
+WEVKTL IKALVS+EAAALQSQ FA+AN+ CN
Sbjct: 121 AWEVKTLLIKALVSEEAAALQSQRFAVANDICN 149
BLAST of Tan0019139 vs. ExPASy TrEMBL
Match:
A0A5A7UZL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00680 PE=4 SV=1)
HSP 1 Score: 210.7 bits (535), Expect = 4.3e-51
Identity = 117/152 (76.97%), Postives = 123/152 (80.92%), Query Frame = 0
Query: 1 METSRLLNHLLLLLCFVATAAAAEAVSTRRPGFLFSRTRGRCTPQFWSSRREGWPRMAPE 60
M++S L LLLLL F AAAAE S R PGFLFSRT GRCT QFWSSR E WPRMAPE
Sbjct: 1 MDSSPFLT-LLLLLSF---AAAAEVASARPPGFLFSRTTGRCTAQFWSSRSEAWPRMAPE 60
Query: 61 SATVAKIFGSRAHERYGSEMTLMEAVAVAGEEEEAFSRVLKEATAALLNSYARKREFPYS 120
SATVAKIFGSRA ERYGSEMTLME A G EEE F RV+KEATAALLNSYAR+R+FPYS
Sbjct: 61 SATVAKIFGSRARERYGSEMTLME--AAGGAEEEVFGRVVKEATAALLNSYARRRDFPYS 120
Query: 121 SWEVKTLFIKALVSKEAAALQSQHFALANEFC 153
+WEVKTL IKALVSKEAA LQSQ FA ANE C
Sbjct: 121 AWEVKTLLIKALVSKEAAVLQSQRFAFANESC 146
BLAST of Tan0019139 vs. TAIR 10
Match:
AT2G20515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; Has 71 Blast hits to 71 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 146.4 bits (368), Expect = 1.9e-35
Identity = 80/151 (52.98%), Postives = 107/151 (70.86%), Query Frame = 0
Query: 4 SRLLNHLLLLLCFVATAAAAEAVSTRRPGFLFSRTRGRCTPQFWSSRREGWPRMAPESAT 63
SRL+ LLCF A ++A RPGF+++R RGRCTPQ+WSS+RE WPRM PE +T
Sbjct: 11 SRLVLVTFFLLCFFAGDSSA-----TRPGFIYTRHRGRCTPQYWSSQREAWPRMVPERST 70
Query: 64 VAKIFGSR-AHERYGSEMTLMEAVAVAGEEEEAFSRVLKEATAALLNSYARKREFPYSSW 123
V KIFG A ER+ S++TL+E+ A EE A+ +LK+ AAL+NSYARK F Y+ W
Sbjct: 71 VEKIFGVMVAKERWRSDLTLVESTARNDEEGNAYGALLKQGIAALINSYARK-SFSYAPW 130
Query: 124 EVKTLFIKALVSKEAAALQSQHFALANEFCN 154
EVKT+ I+A+VS+ AA Q++HFA+AN C+
Sbjct: 131 EVKTMLIQAMVSESAARRQAEHFAVANVACD 155
BLAST of Tan0019139 vs. TAIR 10
Match:
AT2G16630.1 (Pollen Ole e 1 allergen and extensin family protein )
HSP 1 Score: 47.8 bits (112), Expect = 9.4e-06
Identity = 42/112 (37.50%), Postives = 58/112 (51.79%), Query Frame = 0
Query: 42 CTPQFW--SSRREGWPRMAPESATVAKIFGSRAHERYGSEMTLMEAVAVAGEEEEAFSRV 101
C+ Q W R W + P++ VA FG A YG++MT+ EA+ G EA+ +
Sbjct: 243 CSHQLWMKPEYRCYWRAIGPDT-KVAVAFGLVAGRIYGTDMTVREALDGRG---EAYKTL 302
Query: 102 LKEATAALLNSYARKREFPYSSWEVKTLFIKALV--SKEAAALQSQHFALAN 150
L+EAT ALLNSY FPY+S V T AL+ S+ + + F AN
Sbjct: 303 LREATTALLNSY-NSLGFPYNSVAVITYTNLALLGNSEHDVLMTAIRFIKAN 349
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_038899192.1 | 6.2e-60 | 82.28 | uncharacterized protein LOC120086555 [Benincasa hispida] | [more] |
XP_004148954.1 | 1.4e-56 | 81.17 | uncharacterized protein LOC101220310 [Cucumis sativus] >KGN44734.1 hypothetical ... | [more] |
XP_022953859.1 | 1.4e-56 | 79.62 | uncharacterized protein LOC111456270 [Cucurbita moschata] | [more] |
XP_023548905.1 | 1.6e-55 | 78.98 | uncharacterized protein LOC111807417 [Cucurbita pepo subsp. pepo] | [more] |
KAG6576062.1 | 2.5e-53 | 78.34 | hypothetical protein SDJN03_26701, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0K735 | 6.9e-57 | 81.17 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375760 PE=4 SV=1 | [more] |
A0A6J1GR22 | 6.9e-57 | 79.62 | uncharacterized protein LOC111456270 OS=Cucurbita moschata OX=3662 GN=LOC1114562... | [more] |
A0A6J1JR18 | 1.2e-53 | 78.34 | uncharacterized protein LOC111488125 OS=Cucurbita maxima OX=3661 GN=LOC111488125... | [more] |
A0A6J1CRA8 | 1.8e-52 | 75.82 | uncharacterized protein LOC111013459 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A5A7UZL8 | 4.3e-51 | 76.97 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
AT2G20515.1 | 1.9e-35 | 52.98 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT2G16630.1 | 9.4e-06 | 37.50 | Pollen Ole e 1 allergen and extensin family protein | [more] |