Tan0019089 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAACAATTCCGTGTAAGCACGGTCTCTAGACCCCATGGTAATTTCCCCCACTATAAATCCATCCTAAACGCAATCTCTTTTTCAAATCTCAGAAAAAAAAATGGAATTACGAGAAGAAGACGACGTTTTCTCACAATTGAAGTTCATCCAACACCATCTTCTCCAAGACTCCGATTCCTTCCTCACTCTCCTAGATTTCCAATTCCCGTCGCCATCGACCTTCTTCTCGCTCCCGCCGATCAAATTCGAATTCGAAGATTTCGAGTACATGAAATCGTCGGAAGAGGAAGAGCCTCCGATTCAGAGTCCGGAGAGCCAGCAGCCAGAACAATCGGAGCGATCGAGCTCGCCGGAAGCGGCGGTGGCGGAGGAGGTGTCGAGTTCCGACGGCGGAAGGAGGTACAGAGGCGTACGACGGCGCCCGTGGGGGAAGTTCGCGGCGGAGATCCGAGATCCGGGCAGGAAAGGGAGTAGGGTTTGGTTGGGGACTTTCGATTCGGATGTTGATGCGGCTAGGGCTTATGATTCTGCTGCATTTAAGATGAGGGGAAGAAAGGCTAAGTTGAATTTTCCGTTGGATGCCGGAAAGTCTGAGCCGCCGCCGGGGAATGGCCGGAAGAAGAGAAGAGAGAAAGAGATGACTGTAAATTGAACCAGGTAAAAAAAGTACGGTCAAATCCCCCGAGCCTCTCTGCTACCTTACGACAGTTATTAGAGCGAGGATTTGACCTTCATGTACAGTTTAATAATGACCATTTAGTTTTAAATTTCTGATTTTTAAAAAGTAAGCAAATAAATATTATTTTCGTCCATGATTTTTCCTTTTGTTTTTTATTTACTTTTTAGTAATGGCTCAATTTTGAACATTAAAAAAAAAAATCAAAATTGGTTTGAAGTTCATATGCTTCCTTCAGAAAATGAAAATCAATGGTAGAGTGGTAGATAAAAACAATCTAGAATAATAGAGAGCAAACAAGTATAAATTTAAAAAATCAAATTGTTATCAAATCGAGCCTAAACTCTTAATTTGAAGAAAAAAGTGACACTTTTAACCCTGGAACAATCTTCGGATTAATTAATGGTTGTACTTCTATTGTATACTTCTAGTTTATAAAAGTATGAACGTGCTAGATAAAAAAATGGTATGTTATTAGATATTTAGGACCAAAAGATATATCTTCAATTAAAGTAGATGTTTGGATTTCAACTAAAAAACACATTGAAATGAGATTTAAATGTTGTTGAAATATTATTGAACTAGAAAAACTTTCAATTTTGTATCTATTAAGCTTAATTTAATTTGAATTTTTTAAATCATTACTAAATTGTTTTCTACCCACTCTAAAATTCACTCATTTTCCTTATTTTTTTTCTTCTTCTTTTTACTTCAATTTTATCTCACTCTAATATGTATAGCTA CAAAACAATTCCGTGTAAGCACGGTCTCTAGACCCCATGGTAATTTCCCCCACTATAAATCCATCCTAAACGCAATCTCTTTTTCAAATCTCAGAAAAAAAAATGGAATTACGAGAAGAAGACGACGTTTTCTCACAATTGAAGTTCATCCAACACCATCTTCTCCAAGACTCCGATTCCTTCCTCACTCTCCTAGATTTCCAATTCCCGTCGCCATCGACCTTCTTCTCGCTCCCGCCGATCAAATTCGAATTCGAAGATTTCGAGTACATGAAATCGTCGGAAGAGGAAGAGCCTCCGATTCAGAGTCCGGAGAGCCAGCAGCCAGAACAATCGGAGCGATCGAGCTCGCCGGAAGCGGCGGTGGCGGAGGAGGTGTCGAGTTCCGACGGCGGAAGGAGGTACAGAGGCGTACGACGGCGCCCGTGGGGGAAGTTCGCGGCGGAGATCCGAGATCCGGGCAGGAAAGGGAGTAGGGTTTGGTTGGGGACTTTCGATTCGGATGTTGATGCGGCTAGGGCTTATGATTCTGCTGCATTTAAGATGAGGGGAAGAAAGGCTAAGTTGAATTTTCCGTTGGATGCCGGAAAGTCTGAGCCGCCGCCGGGGAATGGCCGGAAGAAGAGAAGAGAGAAAGAGATGACTGTAAATTGAACCAGGTAAAAAAAGTACGGTCAAATCCCCCGAGCCTCTCTGCTACCTTACGACAGTTATTAGAGCGAGGATTTGACCTTCATGTACAGTTTAATAATGACCATTTAGTTTTAAATTTCTGATTTTTAAAAAGTAAGCAAATAAATATTATTTTCGTCCATGATTTTTCCTTTTGTTTTTTATTTACTTTTTAGTAATGGCTCAATTTTGAACATTAAAAAAAAAAATCAAAATTGGTTTGAAGTTCATATGCTTCCTTCAGAAAATGAAAATCAATGGTAGAGTGGTAGATAAAAACAATCTAGAATAATAGAGAGCAAACAAGTATAAATTTAAAAAATCAAATTGTTATCAAATCGAGCCTAAACTCTTAATTTGAAGAAAAAAGTGACACTTTTAACCCTGGAACAATCTTCGGATTAATTAATGGTTGTACTTCTATTGTATACTTCTAGTTTATAAAAGTATGAACGTGCTAGATAAAAAAATGGTATGTTATTAGATATTTAGGACCAAAAGATATATCTTCAATTAAAGTAGATGTTTGGATTTCAACTAAAAAACACATTGAAATGAGATTTAAATGTTGTTGAAATATTATTGAACTAGAAAAACTTTCAATTTTGTATCTATTAAGCTTAATTTAATTTGAATTTTTTAAATCATTACTAAATTGTTTTCTACCCACTCTAAAATTCACTCATTTTCCTTATTTTTTTTCTTCTTCTTTTTACTTCAATTTTATCTCACTCTAATATGTATAGCTA ATGGAATTACGAGAAGAAGACGACGTTTTCTCACAATTGAAGTTCATCCAACACCATCTTCTCCAAGACTCCGATTCCTTCCTCACTCTCCTAGATTTCCAATTCCCGTCGCCATCGACCTTCTTCTCGCTCCCGCCGATCAAATTCGAATTCGAAGATTTCGAGTACATGAAATCGTCGGAAGAGGAAGAGCCTCCGATTCAGAGTCCGGAGAGCCAGCAGCCAGAACAATCGGAGCGATCGAGCTCGCCGGAAGCGGCGGTGGCGGAGGAGGTGTCGAGTTCCGACGGCGGAAGGAGGTACAGAGGCGTACGACGGCGCCCGTGGGGGAAGTTCGCGGCGGAGATCCGAGATCCGGGCAGGAAAGGGAGTAGGGTTTGGTTGGGGACTTTCGATTCGGATGTTGATGCGGCTAGGGCTTATGATTCTGCTGCATTTAAGATGAGGGGAAGAAAGGCTAAGTTGAATTTTCCGTTGGATGCCGGAAAGTCTGAGCCGCCGCCGGGGAATGGCCGGAAGAAGAGAAGAGAGAAAGAGATGACTGTAAATTGA MELREEDDVFSQLKFIQHHLLQDSDSFLTLLDFQFPSPSTFFSLPPIKFEFEDFEYMKSSEEEEPPIQSPESQQPEQSERSSSPEAAVAEEVSSSDGGRRYRGVRRRPWGKFAAEIRDPGRKGSRVWLGTFDSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPGNGRKKRREKEMTVN Homology
BLAST of Tan0019089 vs. ExPASy Swiss-Prot
Match: Q9LY05 (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana OX=3702 GN=ERF106 PE=2 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 4.4e-31 Identity = 90/188 (47.87%), Postives = 107/188 (56.91%), Query Frame = 0
BLAST of Tan0019089 vs. ExPASy Swiss-Prot
Match: Q9FKG2 (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana OX=3702 GN=ERF107 PE=2 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 3.5e-28 Identity = 91/192 (47.40%), Postives = 111/192 (57.81%), Query Frame = 0
BLAST of Tan0019089 vs. ExPASy Swiss-Prot
Match: O80341 (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=ERF5 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.2e-24 Identity = 73/171 (42.69%), Postives = 104/171 (60.82%), Query Frame = 0
BLAST of Tan0019089 vs. ExPASy Swiss-Prot
Match: Q8VY90 (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 GN=ERF105 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.5e-23 Identity = 55/87 (63.22%), Postives = 68/87 (78.16%), Query Frame = 0
BLAST of Tan0019089 vs. ExPASy Swiss-Prot
Match: Q40476 (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 3.7e-22 Identity = 61/120 (50.83%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Tan0019089 vs. NCBI nr
Match: XP_023533021.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 278.5 bits (711), Expect = 4.2e-71 Identity = 153/183 (83.61%), Postives = 163/183 (89.07%), Query Frame = 0
BLAST of Tan0019089 vs. NCBI nr
Match: KAG6605642.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 276.6 bits (706), Expect = 1.6e-70 Identity = 151/183 (82.51%), Postives = 159/183 (86.89%), Query Frame = 0
BLAST of Tan0019089 vs. NCBI nr
Match: KAG7035552.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 276.6 bits (706), Expect = 1.6e-70 Identity = 151/186 (81.18%), Postives = 161/186 (86.56%), Query Frame = 0
BLAST of Tan0019089 vs. NCBI nr
Match: XP_022957677.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita moschata] >XP_022957678.1 ethylene-responsive transcription factor ERF106-like [Cucurbita moschata]) HSP 1 Score: 274.6 bits (701), Expect = 6.0e-70 Identity = 150/186 (80.65%), Postives = 160/186 (86.02%), Query Frame = 0
BLAST of Tan0019089 vs. NCBI nr
Match: XP_022996034.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita maxima]) HSP 1 Score: 267.7 bits (683), Expect = 7.4e-68 Identity = 145/181 (80.11%), Postives = 156/181 (86.19%), Query Frame = 0
BLAST of Tan0019089 vs. ExPASy TrEMBL
Match: A0A6J1H0X6 (ethylene-responsive transcription factor ERF106-like OS=Cucurbita moschata OX=3662 GN=LOC111459141 PE=4 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 2.9e-70 Identity = 150/186 (80.65%), Postives = 160/186 (86.02%), Query Frame = 0
BLAST of Tan0019089 vs. ExPASy TrEMBL
Match: A0A6J1K7L0 (ethylene-responsive transcription factor ERF106-like OS=Cucurbita maxima OX=3661 GN=LOC111491361 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 3.6e-68 Identity = 145/181 (80.11%), Postives = 156/181 (86.19%), Query Frame = 0
BLAST of Tan0019089 vs. ExPASy TrEMBL
Match: A0A6J1ESN1 (ethylene-responsive transcription factor ERF106-like OS=Cucurbita moschata OX=3662 GN=LOC111435630 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 1.8e-59 Identity = 130/165 (78.79%), Postives = 137/165 (83.03%), Query Frame = 0
BLAST of Tan0019089 vs. ExPASy TrEMBL
Match: A0A5A7UNP1 (Ethylene-responsive transcription factor ERF106-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00050 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 1.2e-52 Identity = 123/176 (69.89%), Postives = 132/176 (75.00%), Query Frame = 0
BLAST of Tan0019089 vs. ExPASy TrEMBL
Match: E5GCU9 (AP2/ERF domain-containing transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 1.2e-52 Identity = 123/176 (69.89%), Postives = 132/176 (75.00%), Query Frame = 0
BLAST of Tan0019089 vs. TAIR 10
Match: AT5G07580.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 136.0 bits (341), Expect = 3.1e-32 Identity = 90/188 (47.87%), Postives = 107/188 (56.91%), Query Frame = 0
BLAST of Tan0019089 vs. TAIR 10
Match: AT5G61590.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 126.3 bits (316), Expect = 2.5e-29 Identity = 91/192 (47.40%), Postives = 111/192 (57.81%), Query Frame = 0
BLAST of Tan0019089 vs. TAIR 10
Match: AT5G47230.1 (ethylene responsive element binding factor 5 ) HSP 1 Score: 112.5 bits (280), Expect = 3.7e-25 Identity = 73/171 (42.69%), Postives = 104/171 (60.82%), Query Frame = 0
BLAST of Tan0019089 vs. TAIR 10
Match: AT5G51190.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 110.9 bits (276), Expect = 1.1e-24 Identity = 55/87 (63.22%), Postives = 68/87 (78.16%), Query Frame = 0
BLAST of Tan0019089 vs. TAIR 10
Match: AT2G44840.1 (ethylene-responsive element binding factor 13 ) HSP 1 Score: 103.6 bits (257), Expect = 1.7e-22 Identity = 58/119 (48.74%), Postives = 75/119 (63.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|