Tan0019004 (gene) Snake gourd v1

Overview


Name	Tan0019004
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	reactive oxygen species modulator 1
Location	LG07: 12494023 .. 12496623 (-)
RNA-Seq Expression	Tan0019004
Synteny	Tan0019004

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTCAGTTCTTTTTCGAGATCGGAGGATTCATATTTCAACAAAAAATCGTATTGAGAAGATTGTCGATATAATTCGAAGCTAAATTGCTTGAGGAATAAATTTTCTCCGTGTCTTCTTCAAGGAGAATAATATCAAGGTCGCGACTATGGCGAGAGATAGCTGCTTGGCTCGAGTTACTGCCGGAGTAGCCGTCGGCGGCGCTGTTGGCGGAGCCGTCGGTAAGGAAAACCCTAACATCTTTCCAAAGTTCTATTACCTATCGTCTTTTCAAACATCTTTGTTCTTCCCTATTTCTTCTTGTTTCCTGAGTTCCTTAGTATTCGAATGTTTGAATTGTTGTTTAACTGTTTCGATGATTAAGTTGTTATGTTCGGATATACTGGATCAAAGAGTTTTGACAAGAAGTTGGATATTTGGTCAAGTTGCGTTTGTGATTGAATCATGTTTTTCATTGATAATACGGTAATGTAGCCTTATAGAATTCTTCCATTTGATCTTTCATGTTTAAGCTTGGTTTCTTTCGGTTTTTTTTTTTTTTGTTGGACCATATCACTTGCTCGTGGACATAATTTTTATTGTGTAGAAAAAGTTCTTAGTTTTCCATTGCCCATGGCAATGATTAGTTTCGATTCTTTTGAAAGTACTTTGGTAGATTCGTCTTGTTAAGTATGGAGTCTACTAATCGTCTGTTTTGGGGATTTGTTGTACTCCGTTGGCTTATTTTGTGTATGCCTTATCTCATAAAGTTGACCGAATCTTGTAATAAGGCATGTAGCCTAGCCATTGACCTTTATGATCCATCCCGGTCTATACTGACTTTCTTATGCTCAAAATTTGACCTTATTTAACATTACACATTTTTCAGAACCTCTTTATTTGCTTTCTTAGTTGTTAATCTATTAGGAGTGTCAAGCATTATGAACTAGCCAATGCCATAACTTCGAAGACTTACATCAGTATGAAGCCTTTGTAAACAACAATTTGGGCTGTCACTTTTTCTTTTAGAATGTACATCAGTAATGACTTTCTTTCCAAGTTGCAATGTATTTTTCTCCTGTCTAGGGAGTAAGACTTCACCACATCCGCATGTGAGAGTACTAGTGAGGGGTAGGTTGGGGTTATGAATTGGATGTTAGTAAGGACTTAGTGGTAACTAGATAAAGGATGTCTTAGTAATAGGGGGATTATTTTAGTGGGATTGTCCATAGTGGGGCGTGGGAGAAAGATAGCCCACTCAAAAGTCTGTTGTTATTTTGTAATTGTCTTTAATATTGCAATATAGTTCTATCGTTTGTTCTATTGAGTTTGGGTACCAAAAGCCCCCCCAAATATATTTCTTTCCATGTATTCCTCCAGGTCTACGCTATAGTTTGAACTGATACAATCTGTTCCATCCTAAGTTTGATATGTTTTGCCAACTAACATTTTGTCTTTCTCTAGGTGCTGTTTATGGGACTTACGAGGCCATTAGATTCAAGGTATATTATCTTTTCTGATTCTAATCTTCAAAAAATTAGACTTGGAATTCAACCACACGTCCCTCTAGCTATTTATGATTTTAGTAAGATTCTCATCAAATTATTATTTATGGTTAATCTTTTTATTTCTTTTTTTATTTTAACAATTAATTAATGACACTTGTCATATCTAAATATGCATGAAACGAATATGAGATTCCAGCTACTGCCTCATTAGGAATCATAGGAGACTATCAAACTTCTGTGTCATTAGCATGGGATTTGAATTCACAATCAACCGATTCTGAAGTGAAAACAAAATTACTTCACATTTGGTCCTTCTGGAAACAAATTTCATGATCTTCCATGTATTTTCATTTCTCGTCTTCGTGTTATTTGAAATTGTTAATTAGGGGAACCCATAGATTATAGGGAATTGGTTGTTTCTACATTCTTTTCTGCAGACAAAAGTCTATCGCATGTCTTAAGCCATTTTGCTCATTTTTCATTCTTACTACGTTAAGTTTCTGTCCTGAAAACCCGAAGATTTACTATGTCCAAGTATGTTAGGTTTGGTTACTTATTGTTTAATACAGATGCTGATGATGATAGATGGGAATTATAATTTCTTATTCAGATTCTGGACTCTTTTTTTTGTTTTAGTTCAACACTTGCAGGTGGGAGATTGAACCATTATTAACCTCTAGAATTATAATTAATGTGTTACCCACTGAGCTATTGGCTTAGATTCTGCACTTATTTGCTTGGACGTTAACAAATTAGGTATTTATAAACTTGCATTTGTTTGTACAGGTGCCAGGACTTCTGAAAATCAGGTATATTGGACAAACAACGCTTGGAAGTGCTGCCATTTTTGGTCTCTTCTTGGGTGCAGGCAGTTTGATACATTGTGGAAAGTCATACTGAATCACATGGCTCTGTATTTGGATCAAATAATATTGGTTTTTTTTAGAGTTTTTGGTTTTCAACATGAAGTTAGTGCAGTCAGTCATTTGTTTATTTAAAAGCTTCCATTTGTGTTAGTTAAAGGAACAAAGTGGTCAATTTGATGGTGATTTGGCTTCACCCTACTTGGATTCAAATTTCTATGCCTTTTTTGGTGGCTCCCTTTTCTTTAAAA

mRNA sequence

ATTTTCAGTTCTTTTTCGAGATCGGAGGATTCATATTTCAACAAAAAATCGTATTGAGAAGATTGTCGATATAATTCGAAGCTAAATTGCTTGAGGAATAAATTTTCTCCGTGTCTTCTTCAAGGAGAATAATATCAAGGTCGCGACTATGGCGAGAGATAGCTGCTTGGCTCGAGTTACTGCCGGAGTAGCCGTCGGCGGCGCTGTTGGCGGAGCCGTCGGTGCTGTTTATGGGACTTACGAGGCCATTAGATTCAAGGTGCCAGGACTTCTGAAAATCAGGTATATTGGACAAACAACGCTTGGAAGTGCTGCCATTTTTGGTCTCTTCTTGGGTGCAGGCAGTTTGATACATTGTGGAAAGTCATACTGAATCACATGGCTCTGTATTTGGATCAAATAATATTGGTTTTTTTTAGAGTTTTTGGTTTTCAACATGAAGTTAGTGCAGTCAGTCATTTGTTTATTTAAAAGCTTCCATTTGTGTTAGTTAAAGGAACAAAGTGGTCAATTTGATGGTGATTTGGCTTCACCCTACTTGGATTCAAATTTCTATGCCTTTTTTGGTGGCTCCCTTTTCTTTAAAA

Coding sequence (CDS)

ATGGCGAGAGATAGCTGCTTGGCTCGAGTTACTGCCGGAGTAGCCGTCGGCGGCGCTGTTGGCGGAGCCGTCGGTGCTGTTTATGGGACTTACGAGGCCATTAGATTCAAGGTGCCAGGACTTCTGAAAATCAGGTATATTGGACAAACAACGCTTGGAAGTGCTGCCATTTTTGGTCTCTTCTTGGGTGCAGGCAGTTTGATACATTGTGGAAAGTCATACTGA

Protein sequence

MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGLFLGAGSLIHCGKSY

Homology

[Close]

BLAST of Tan0019004 vs. ExPASy Swiss-Prot
Match: A4QNF3 (Reactive oxygen species modulator 1 OS=Xenopus tropicalis OX=8364 GN=romo1 PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 8.3e-05
Identity = 26/69 (37.68%), Postives = 39/69 (56.52%), Query Frame = 0


Query: 2  ARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGLF 61
          ++ SC  RV  G  +G AVG A GA++GT+  +RF + G   +  +G+T + S   FG F
Sbjct: 11 SQPSCFDRVKMGFMMGFAVGMAAGALFGTFSCLRFGMRGRELMGGVGKTMMQSGGTFGTF 70

Query: 62 LGAGSLIHC 71
          +  G  I C
Sbjct: 71 MAIGMGIRC 79

[Close]

BLAST of Tan0019004 vs. ExPASy Swiss-Prot
Match: Q6NYD1 (Reactive oxygen species modulator 1 OS=Danio rerio OX=7955 GN=romo1 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.9e-04
Identity = 26/69 (37.68%), Postives = 38/69 (55.07%), Query Frame = 0


Query: 2  ARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGLF 61
          A+ SC  RV  G  +G AVG A GA++GT+  +R  + G   +  +G+T + S   FG F
Sbjct: 12 AQPSCFDRVKMGFMMGFAVGMAAGAMFGTFSCLRIGMRGRELMGGVGKTMMQSGGTFGTF 71

Query: 62 LGAGSLIHC 71
          +  G  I C
Sbjct: 72 MAIGMGIRC 80

[Close]

BLAST of Tan0019004 vs. ExPASy Swiss-Prot
Match: Q4V7T9 (Reactive oxygen species modulator 1 OS=Xenopus laevis OX=8355 GN=romo1 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.9e-04
Identity = 25/69 (36.23%), Postives = 39/69 (56.52%), Query Frame = 0


Query: 2  ARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGLF 61
          ++ +C  RV  G  +G AVG A GA++GT+  +RF + G   +  +G+T + S   FG F
Sbjct: 11 SQPNCFDRVKMGFMMGFAVGMAAGALFGTFSCLRFGMRGRELMGGVGKTMMQSGGTFGTF 70

Query: 62 LGAGSLIHC 71
          +  G  I C
Sbjct: 71 MAIGMGIRC 79

[Close]

BLAST of Tan0019004 vs. ExPASy Swiss-Prot
Match: Q3SZV8 (Reactive oxygen species modulator 1 OS=Bos taurus OX=9913 GN=ROMO1 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.4e-04
Identity = 26/69 (37.68%), Postives = 38/69 (55.07%), Query Frame = 0


Query: 2  ARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGLF 61
          ++ SC  RV  G  +G AVG A GA++GT+  +R  + G   +  IG+T + S   FG F
Sbjct: 11 SQPSCFDRVKMGFVMGCAVGMAAGALFGTFSCLRIGMRGRELMGGIGKTMMQSGGTFGTF 70

Query: 62 LGAGSLIHC 71
          +  G  I C
Sbjct: 71 MAIGMGIRC 79

[Close]

BLAST of Tan0019004 vs. ExPASy Swiss-Prot
Match: P60602 (Reactive oxygen species modulator 1 OS=Homo sapiens OX=9606 GN=ROMO1 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.4e-04
Identity = 26/69 (37.68%), Postives = 38/69 (55.07%), Query Frame = 0


Query: 2  ARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGLF 61
          ++ SC  RV  G  +G AVG A GA++GT+  +R  + G   +  IG+T + S   FG F
Sbjct: 11 SQPSCFDRVKMGFVMGCAVGMAAGALFGTFSCLRIGMRGRELMGGIGKTMMQSGGTFGTF 70

Query: 62 LGAGSLIHC 71
          +  G  I C
Sbjct: 71 MAIGMGIRC 79

[Close]

BLAST of Tan0019004 vs. NCBI nr
Match: XP_004140202.2 (reactive oxygen species modulator 1 [Cucumis sativus] >XP_008449669.1 PREDICTED: reactive oxygen species modulator 1 [Cucumis melo] >XP_022152962.1 reactive oxygen species modulator 1 [Momordica charantia] >XP_022943286.1 reactive oxygen species modulator 1 isoform X2 [Cucurbita moschata] >XP_022986427.1 reactive oxygen species modulator 1 isoform X2 [Cucurbita maxima] >XP_023511835.1 reactive oxygen species modulator 1 [Cucurbita pepo subsp. pepo] >XP_038900697.1 reactive oxygen species modulator 1 [Benincasa hispida] >KAG6570413.1 Reactive oxygen species modulator 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010289.1 Reactive oxygen species modulator 1 [Cucurbita argyrosperma subsp. argyrosperma] >KGN48107.1 hypothetical protein Csa_003706 [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 3.8e-31
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60
          MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL
Sbjct: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60

Query: 61 FLGAGSLIHCGKSY 75
          FLGAGSLIHCGKSY
Sbjct: 61 FLGAGSLIHCGKSY 74

[Close]

BLAST of Tan0019004 vs. NCBI nr
Match: XP_023876465.1 (reactive oxygen species modulator 1 [Quercus suber] >KAF3969773.1 hypothetical protein CMV_006468 [Castanea mollissima])

HSP 1 Score: 143.7 bits (361), Expect = 6.5e-31
Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60
          MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGL+KIRYIGQTTLGSAAIFGL
Sbjct: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLMKIRYIGQTTLGSAAIFGL 60

Query: 61 FLGAGSLIHCGKSY 75
          FLGAGSLIHCGKSY
Sbjct: 61 FLGAGSLIHCGKSY 74

[Close]

BLAST of Tan0019004 vs. NCBI nr
Match: XP_006362315.1 (PREDICTED: reactive oxygen species modulator 1-like [Solanum tuberosum] >XP_015057079.1 reactive oxygen species modulator 1-like [Solanum pennellii] >KAG5577609.1 hypothetical protein H5410_057743 [Solanum commersonii])

HSP 1 Score: 143.7 bits (361), Expect = 6.5e-31
Identity = 72/74 (97.30%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60
          MARDSCLARVTAGVA+GGAVGGAVGAVYGTYEA+RFKVPGLLKIRYIGQTTLGSAAIFGL
Sbjct: 1  MARDSCLARVTAGVAIGGAVGGAVGAVYGTYEAVRFKVPGLLKIRYIGQTTLGSAAIFGL 60

Query: 61 FLGAGSLIHCGKSY 75
          FLGAGSLIHCGKSY
Sbjct: 61 FLGAGSLIHCGKSY 74

[Close]

BLAST of Tan0019004 vs. NCBI nr
Match: XP_012455136.1 (PREDICTED: reactive oxygen species modulator 1-like isoform X2 [Gossypium raimondii] >XP_016699771.1 reactive oxygen species modulator 1-like [Gossypium hirsutum] >XP_016728217.1 reactive oxygen species modulator 1-like [Gossypium hirsutum] >XP_017649162.1 PREDICTED: reactive oxygen species modulator 1-like [Gossypium arboreum] >XP_028074600.1 reactive oxygen species modulator 1 [Camellia sinensis] >XP_039067227.1 reactive oxygen species modulator 1-like [Hibiscus syriacus] >KAB2010113.1 hypothetical protein ES319_D10G214000v1 [Gossypium barbadense] >KAG8480758.1 hypothetical protein CXB51_025442 [Gossypium anomalum] >TYG51104.1 hypothetical protein ES288_D10G230000v1 [Gossypium darwinii] >TYH50818.1 hypothetical protein ES332_D10G231400v1 [Gossypium tomentosum] >TYI62052.1 hypothetical protein E1A91_D10G217800v1 [Gossypium mustelinum])

HSP 1 Score: 143.3 bits (360), Expect = 8.5e-31
Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60
          MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIR+KVPGLLKIRYIGQTTLGSAAIFGL
Sbjct: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRYKVPGLLKIRYIGQTTLGSAAIFGL 60

Query: 61 FLGAGSLIHCGKSY 75
          FLGAGSLIHCGKSY
Sbjct: 61 FLGAGSLIHCGKSY 74

[Close]

BLAST of Tan0019004 vs. NCBI nr
Match: XP_002279769.1 (PREDICTED: reactive oxygen species modulator 1 [Vitis vinifera] >XP_034688326.1 reactive oxygen species modulator 1 [Vitis riparia] >CBI24226.3 unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 142.9 bits (359), Expect = 1.1e-30
Identity = 72/74 (97.30%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60
          MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIR+KVPGLLKIRYIGQTTLGSAA+FGL
Sbjct: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRYKVPGLLKIRYIGQTTLGSAAVFGL 60

Query: 61 FLGAGSLIHCGKSY 75
          FLGAGSLIHCGKSY
Sbjct: 61 FLGAGSLIHCGKSY 74

[Close]

BLAST of Tan0019004 vs. ExPASy TrEMBL
Match: A0A6J1J7H7 (reactive oxygen species modulator 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484176 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-31
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60
          MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL
Sbjct: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60

Query: 61 FLGAGSLIHCGKSY 75
          FLGAGSLIHCGKSY
Sbjct: 61 FLGAGSLIHCGKSY 74

[Close]

BLAST of Tan0019004 vs. ExPASy TrEMBL
Match: A0A0A0KIA0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G432800 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-31
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60
          MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL
Sbjct: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60

Query: 61 FLGAGSLIHCGKSY 75
          FLGAGSLIHCGKSY
Sbjct: 61 FLGAGSLIHCGKSY 74

[Close]

BLAST of Tan0019004 vs. ExPASy TrEMBL
Match: A0A6J1DHP0 (reactive oxygen species modulator 1 OS=Momordica charantia OX=3673 GN=LOC111020576 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-31
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60
          MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL
Sbjct: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60

Query: 61 FLGAGSLIHCGKSY 75
          FLGAGSLIHCGKSY
Sbjct: 61 FLGAGSLIHCGKSY 74

[Close]

BLAST of Tan0019004 vs. ExPASy TrEMBL
Match: A0A6J1FRB8 (reactive oxygen species modulator 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448103 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-31
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60
          MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL
Sbjct: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60

Query: 61 FLGAGSLIHCGKSY 75
          FLGAGSLIHCGKSY
Sbjct: 61 FLGAGSLIHCGKSY 74

[Close]

BLAST of Tan0019004 vs. ExPASy TrEMBL
Match: A0A1S3BLX4 (reactive oxygen species modulator 1 OS=Cucumis melo OX=3656 GN=LOC103491480 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-31
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60
          MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL
Sbjct: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60

Query: 61 FLGAGSLIHCGKSY 75
          FLGAGSLIHCGKSY
Sbjct: 61 FLGAGSLIHCGKSY 74

[Close]

BLAST of Tan0019004 vs. TAIR 10
Match: AT3G07910.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reactive oxygen species modulator 1 (InterPro:IPR018450); Has 192 Blast hits to 192 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 127.5 bits (319), Expect = 4.5e-30
Identity = 63/74 (85.14%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 1  MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60
          MA++SCLA++TAGVAVGGA+GGAVGAVYGTYEAIR KVPGL K+R+IGQTTL SAAIFGL
Sbjct: 1  MAKNSCLAKITAGVAVGGALGGAVGAVYGTYEAIRVKVPGLHKVRFIGQTTLSSAAIFGL 60

Query: 61 FLGAGSLIHCGKSY 75
          FLGAGSLIHCGK Y
Sbjct: 61 FLGAGSLIHCGKGY 74

The following BLAST results are available for this feature:

BLAST of Tan0019004 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4QNF3	8.3e-05	37.68	Reactive oxygen species modulator 1 OS=Xenopus tropicalis OX=8364 GN=romo1 PE=3 ...	[more]
Q6NYD1	1.9e-04	37.68	Reactive oxygen species modulator 1 OS=Danio rerio OX=7955 GN=romo1 PE=3 SV=1	[more]
Q4V7T9	1.9e-04	36.23	Reactive oxygen species modulator 1 OS=Xenopus laevis OX=8355 GN=romo1 PE=3 SV=1	[more]
Q3SZV8	2.4e-04	37.68	Reactive oxygen species modulator 1 OS=Bos taurus OX=9913 GN=ROMO1 PE=3 SV=1	[more]
P60602	2.4e-04	37.68	Reactive oxygen species modulator 1 OS=Homo sapiens OX=9606 GN=ROMO1 PE=1 SV=1	[more]

BLAST of Tan0019004 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140202.2	3.8e-31	100.00	reactive oxygen species modulator 1 [Cucumis sativus] >XP_008449669.1 PREDICTED:...	[more]
XP_023876465.1	6.5e-31	98.65	reactive oxygen species modulator 1 [Quercus suber] >KAF3969773.1 hypothetical p...	[more]
XP_006362315.1	6.5e-31	97.30	PREDICTED: reactive oxygen species modulator 1-like [Solanum tuberosum] >XP_0150...	[more]
XP_012455136.1	8.5e-31	98.65	PREDICTED: reactive oxygen species modulator 1-like isoform X2 [Gossypium raimon...	[more]
XP_002279769.1	1.1e-30	97.30	PREDICTED: reactive oxygen species modulator 1 [Vitis vinifera] >XP_034688326.1 ...	[more]

BLAST of Tan0019004 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J7H7	1.8e-31	100.00	reactive oxygen species modulator 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0KIA0	1.8e-31	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G432800 PE=3 SV=1	[more]
A0A6J1DHP0	1.8e-31	100.00	reactive oxygen species modulator 1 OS=Momordica charantia OX=3673 GN=LOC1110205...	[more]
A0A6J1FRB8	1.8e-31	100.00	reactive oxygen species modulator 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A1S3BLX4	1.8e-31	100.00	reactive oxygen species modulator 1 OS=Cucumis melo OX=3656 GN=LOC103491480 PE=3...	[more]

BLAST of Tan0019004 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07910.1	4.5e-30	85.14	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018450	Romo1/Mgr2	SMART	SM01378	Romo1_2	coord: 4..70 e-value: 1.1E-31 score: 121.3
IPR018450	Romo1/Mgr2	PFAM	PF10247	Romo1	coord: 5..70 e-value: 3.8E-22 score: 78.4
IPR018450	Romo1/Mgr2	PANTHER	PTHR28525	REACTIVE OXYGEN SPECIES MODULATOR 1	coord: 1..73
None	No IPR available	PANTHER	PTHR28525:SF6	BNAC03G35570D PROTEIN	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0019004.1	Tan0019004.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030150	protein import into mitochondrial matrix
biological_process	GO:0045039	protein insertion into mitochondrial inner membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005744	TIM23 mitochondrial import inner membrane translocase complex