Tan0018985 (gene) Snake gourd v1

Overview


Name	Tan0018985
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	mediator of RNA polymerase II transcription subunit 33B-like
Location	LG07: 74697730 .. 74700209 (-)
RNA-Seq Expression	Tan0018985
Synteny	Tan0018985

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTCTCCGCTCAACCGCCAGGTCAACTGCAGGGGATAGCTGGTTTATGGGATAGTGTGTTGGAGCTTACAAAGTCGGCACAGGACAAGAACTGCGATCCACTGCTTTGGGTGGTTCAGCTGAGCTCGAGCCTCAATTCGGCCGACGTTTCCTTGCCGTCTGTCGAGCTCGCCCAGCTCTTGGTCTCTCATATTTGTTGGGAAAATCACGTTCCGATCATGTGGAAATTCCTTGAGAAGGCAATGACCGCAAAAATCGTTCCTCCCCTGCTGGTTATTGCTCTTCTTTCTACCAGGTCTCATTTCTTCTATCAATTTGATTACTCTCTTCCCCCCTTAAGCTTCCTCGCTTCCTCCATTTTTTTGTGTAAATCTTATTAACGGGACATTTTTAATGCAGAATGTATCATTTTGAGTGCTTGTTAATTATGCTTTTCCGTGTTCCTTCAAAGCAATACTTTGAGTTTGCTTATTGTTCTCTATGTTCCCGCGTGGACCATTGTGAAAATAAGTTACGGAGCGTAAAGAAAAATGGAACTGAAGATATAAATATGCATCTCGACATTCATACGTCTTAACTCATGCATAGATTTCGTGCGTTGCTGCGTAATTGCCTTTCTGCTTGCATATCATCCATAATTTCGTTGTGCTGTTATTGTCTACGGTTGATAGCAAGTTCAAGTCTGCATCTGTTGCCTCTTATGCAACAATTCAGTTTGCATGAAATACTGACTTGATTTTGGAATATGTCTGAAACTTGTTAACATTTTATTTTTCTTCCTCTTTTTTTTTTTTAAATATATTTTTGTTTTGTTTTGTTTTTCTCATCCTCTCTATTCACTGTCCAAAGTTGACATATATGGCATTTTTTCTCTGATTTACTTCAGGGCAATTCCATATAGAAAGCTTCGACCTGCAGCATACAGGCTTTACCTGGAACTTCTAAACAGACATATCTTTTCGTTAACATCGAAAATCAACGGACCCAATTATCAAAGGTAGATTTGATTGTAGTGGTTAGCCTCGTTTTCTCTTTCATTCAGTTTAATCATTTTTCTTTCTTAATGGTAAACCTAGAGGCAAACTTTTTCCTTGAGAGGCATTCGGGGGTATAAGTCTAAGCAAAGCCAAGAAGTTGTCAACCACTTCCACATAATGCACTGTCCTGGAGAGAGATACTAGCTAGGGATATTTTGAGTTTTATCATGATTGTTGTACCCTCGCGGGGGCAAGCTCCCATTACAAGAAAGAGAGCTTTGCTTTCTTGATATTTTTTGAGTGCTGGATCACCTTATAAAGGCTAGGGTCCAACAAGTCTCCTTTGTTGACGATATCCTTCAGCAAGGAATTGGTAGACAGAATTCCTGTAACATCATGCTCGTCTCTGCAATCTTTTTAATAAATTTTCTTTTGTGGAAGTTTTAAATTTTCAATTCCTTATTTTAGTTACCGACTCAAAAATAATGAGAGAAATGCCTCAGCTCAGCCTTACTGCACCTTGATTCGTTTCATCACCCACCCTCCAGATTTTTATTTTATTCAACTGGAGGAAAAGGCTTCATGAATGATTTTATTCCCCATTTCAGGATCATGCAAACCATTGATGATGTCCTTCATCTGTCCCAGATATTTGGTCTCCAAACATGTGAACCCGGGCTACTTATCGTTGAATTATTCTTTTCAATTGTATGGCAGTTGCTTGATGCATCATTGGATGATGAAGGATTGCTGGTACTTCCTGCAGAAGAGAGATCAGCGTGGCTAATCAGGCCACAACCACATGATATGGAACTAGATGTTCATGATTCGTTTAATGAGAAGAGAAGTGAGAACAGTGAAAGCCTGCTTAAAGTAAACACTGCAAAGGCTATTGAGATAATTGGGCAGTTTCTGCAAAATAAGAAAACTGCAAGGATTTTGTGCTTGGCCCATCGAAATATGTAAGAAGCTCTCTCTCCCCGTTTTCTTTGATTTCTGAAGGAAAGAAAAGCGTATGGATTTTAAGAAAGGCCATGTTTCATATAGTCTATTGTTAGTTGTTGGAATGACGTTTACTGATTTAATGTTAAATGAATACAAAATTTTGACTGTTCAAAGAAAAAGATGTAACATAATACTGCTTTCTGGTTTTTAGGCCTTTGCACTGGGCAGGTTTTGCCCAGCGGTTACAACTACTTGCAGCAAACTCAGTAGTTTTGAGGAACACAAAGCTTATAACTCCAGAGGTCCTTCTGTACTGGACATCTGATGAACATAGGCTTTTATCACTAGAAGGAAAAACAACATCTCAGCTAGAGTTTCGTGATGTAATGGCTTCTGGATCACTATTTTCTTCCGCTGGTCAATCTCATGGTGTTAATTGGTCTGCATTGTGGCTTCCCATCGATTTGTTCCTGGAGGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTTGAGCGTCTGATTTGTATGAGCCAACAATTTTTATAG

mRNA sequence

ATGGCGGTCTCCGCTCAACCGCCAGGTCAACTGCAGGGGATAGCTGGTTTATGGGATAGTGTGTTGGAGCTTACAAAGTCGGCACAGGACAAGAACTGCGATCCACTGCTTTGGGTGGTTCAGCTGAGCTCGAGCCTCAATTCGGCCGACGTTTCCTTGCCGTCTGTCGAGCTCGCCCAGCTCTTGGTCTCTCATATTTGTTGGGAAAATCACGTTCCGATCATGTGGAAATTCCTTGAGAAGGCAATGACCGCAAAAATCGTTCCTCCCCTGCTGGTTATTGCTCTTCTTTCTACCAGGGCAATTCCATATAGAAAGCTTCGACCTGCAGCATACAGGCTTTACCTGGAACTTCTAAACAGACATATCTTTTCGTTAACATCGAAAATCAACGGACCCAATTATCAAAGGATCATGCAAACCATTGATGATGTCCTTCATCTGTCCCAGATATTTGGTCTCCAAACATGTGAACCCGGGCTACTTATCGTTGAATTATTCTTTTCAATTGTATGGCAGTTGCTTGATGCATCATTGGATGATGAAGGATTGCTGGTACTTCCTGCAGAAGAGAGATCAGCGTGGCTAATCAGGCCACAACCACATGATATGGAACTAGATGTTCATGATTCGTTTAATGAGAAGAGAAGTGAGAACAGTGAAAGCCTGCTTAAAGTAAACACTGCAAAGGCTATTGAGATAATTGGGCAGTTTCTGCAAAATAAGAAAACTGCAAGGATTTTGTGCTTGGCCCATCGAAATATGCCTTTGCACTGGGCAGGTTTTGCCCAGCGGTTACAACTACTTGCAGCAAACTCAGTAGTTTTGAGGAACACAAAGCTTATAACTCCAGAGGTCCTTCTGTACTGGACATCTGATGAACATAGGCTTTTATCACTAGAAGGAAAAACAACATCTCAGCTAGAGTTTCGTGATGTAATGGCTTCTGGATCACTATTTTCTTCCGCTGGTCAATCTCATGGTGTTAATTGGTCTGCATTGTGGCTTCCCATCGATTTGTTCCTGGAGGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTTGAGCGTCTGATTTGTATGAGCCAACAATTTTTATAG

Coding sequence (CDS)

ATGGCGGTCTCCGCTCAACCGCCAGGTCAACTGCAGGGGATAGCTGGTTTATGGGATAGTGTGTTGGAGCTTACAAAGTCGGCACAGGACAAGAACTGCGATCCACTGCTTTGGGTGGTTCAGCTGAGCTCGAGCCTCAATTCGGCCGACGTTTCCTTGCCGTCTGTCGAGCTCGCCCAGCTCTTGGTCTCTCATATTTGTTGGGAAAATCACGTTCCGATCATGTGGAAATTCCTTGAGAAGGCAATGACCGCAAAAATCGTTCCTCCCCTGCTGGTTATTGCTCTTCTTTCTACCAGGGCAATTCCATATAGAAAGCTTCGACCTGCAGCATACAGGCTTTACCTGGAACTTCTAAACAGACATATCTTTTCGTTAACATCGAAAATCAACGGACCCAATTATCAAAGGATCATGCAAACCATTGATGATGTCCTTCATCTGTCCCAGATATTTGGTCTCCAAACATGTGAACCCGGGCTACTTATCGTTGAATTATTCTTTTCAATTGTATGGCAGTTGCTTGATGCATCATTGGATGATGAAGGATTGCTGGTACTTCCTGCAGAAGAGAGATCAGCGTGGCTAATCAGGCCACAACCACATGATATGGAACTAGATGTTCATGATTCGTTTAATGAGAAGAGAAGTGAGAACAGTGAAAGCCTGCTTAAAGTAAACACTGCAAAGGCTATTGAGATAATTGGGCAGTTTCTGCAAAATAAGAAAACTGCAAGGATTTTGTGCTTGGCCCATCGAAATATGCCTTTGCACTGGGCAGGTTTTGCCCAGCGGTTACAACTACTTGCAGCAAACTCAGTAGTTTTGAGGAACACAAAGCTTATAACTCCAGAGGTCCTTCTGTACTGGACATCTGATGAACATAGGCTTTTATCACTAGAAGGAAAAACAACATCTCAGCTAGAGTTTCGTGATGTAATGGCTTCTGGATCACTATTTTCTTCCGCTGGTCAATCTCATGGTGTTAATTGGTCTGCATTGTGGCTTCCCATCGATTTGTTCCTGGAGGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTTGAGCGTCTGATTTGTATGAGCCAACAATTTTTATAG

Protein sequence

MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSLEGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICMSQQFL

Homology

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BLAST of Tan0018985 vs. ExPASy Swiss-Prot
Match: Q9LUG9 (Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana OX=3702 GN=MED33A PE=1 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.1e-84
Identity = 165/342 (48.25%), Postives = 232/342 (67.84%), Query Frame = 0


Query: 17  LWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMW 76
           +WD V+ELTK AQ+   DP LW  QLSS+L    V LPS ELA+++VS+ICW+N+VPI+W
Sbjct: 9   VWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVW 68

Query: 77  KFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQ 136
           KFLE+AM  K+V PL+V+ALL+ R +P R  + AAYR+YLELL R++F++   I+GP+YQ
Sbjct: 69  KFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDHISGPHYQ 128

Query: 137 RIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 196
           ++M ++ ++L LS++F L T +PG+L+VE  F +V QLLDA+L DEGLL L  +  S WL
Sbjct: 129 KVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQDSSSQWL 188

Query: 197 IRPQPHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMP 256
           ++ Q  DME+D  + +NEK + + E L  +NT  AIE+I +FL+N   AR+L L   N  
Sbjct: 189 VKSQ--DMEIDAPERYNEK-TGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYLVSSNRA 248

Query: 257 LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSLEGKTTSQLEFRDVMAS 316
             W  F Q++QLL  NS  L+++K++    LL   S+     S + K TS  +   ++  
Sbjct: 249 SKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKSNAIVDF 308

Query: 317 GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVE 359
           GSL S AG  HG + S+LWLP+DL  EDAMDG QV  TSA+E
Sbjct: 309 GSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIE 347

[Close]

BLAST of Tan0018985 vs. ExPASy Swiss-Prot
Match: F4IN69 (Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana OX=3702 GN=MED33B PE=1 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.0e-79
Identity = 170/344 (49.42%), Postives = 212/344 (61.63%), Query Frame = 0


Query: 17  LWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMW 76
           LW+SV  L +SAQ+KN DPL W +QL  +L SA +SLPS +LAQ LV+HI WENH P+ W
Sbjct: 10  LWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSW 69

Query: 77  KFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQ 136
           K LEKA++  IVPPLLV+ALLS R IP RKL PAAYRLY+ELL RH FS    I  P Y 
Sbjct: 70  KLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAPGYH 129

Query: 137 RIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 196
           + M +IDD+LHLS+ FG+Q  EPG +++   FSIVW+LLDASLD+EGLL L + +RS W 
Sbjct: 130 KTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRSKW- 189

Query: 197 IRPQPHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMP 256
               PHDM+LD  ++ + KR+EN ++L K NT  AIE+I +FLQNK T+RIL LA +NM 
Sbjct: 190 -PSSPHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM- 249

Query: 257 LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSLEGKTTSQLEFRDVMAS 316
                                                       E KT  + EF  +++S
Sbjct: 250 --------------------------------------------ESKTIPRGEFHAIVSS 299

Query: 317 GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 361
           GS  +          SALWLPIDLF ED MDG+Q  A SAVE L
Sbjct: 310 GSKLALTSD------SALWLPIDLFFEDIMDGTQAAAASAVENL 299

[Close]

BLAST of Tan0018985 vs. NCBI nr
Match: XP_023554812.1 (mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 665.2 bits (1715), Expect = 3.2e-187
Identity = 332/363 (91.46%), Postives = 349/363 (96.14%), Query Frame = 0


Query: 1   MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQ 60
           MAVSAQPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLW VQLSSSLNSA VSLPSVELA 
Sbjct: 1   MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60

Query: 61  LLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLN 120
           LLVSHICW+NHVPIMWKFLEKAMTA+IVPPLLVIALLSTRAIPYRKLRPAAYRLYLELL+
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLD 180
           RH+FS T ++NGPNY RIMQTIDDVLHLSQIFGLQTCEPGLL+VELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180

Query: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQ 240
           DEGLL LPAEERS WLIRPQPHDMELDVHDSF EK++ENSE+LLKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240

Query: 241 NKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL 300
           NKKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL+WTSD+HR LS 
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQ 300

Query: 301 EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           EGKTTSQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKTTSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 ICM 364
           IC+
Sbjct: 361 ICL 363

[Close]

BLAST of Tan0018985 vs. NCBI nr
Match: XP_022155567.1 (mediator of RNA polymerase II transcription subunit 33B-like [Momordica charantia])

HSP 1 Score: 664.5 bits (1713), Expect = 5.5e-187
Identity = 335/363 (92.29%), Postives = 349/363 (96.14%), Query Frame = 0


Query: 1   MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQ 60
           M VS QPP QLQG+AGLWDSVLELTKSAQDKNCDPLLW VQLSSSLNSA VSLPS+ELAQ
Sbjct: 1   MVVSVQPPSQLQGMAGLWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQ 60

Query: 61  LLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLN 120
           LLVSHICW+NHVPIMWKFLEKAMTAKIVPPLLV+ALLSTRAIPYRKLRPAAYRLYLELL+
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLD 180
           RH+FS TS+INGPNYQRIMQTIDDVLHLSQIF LQ CEPGLL+VELFFSIVWQLLDASLD
Sbjct: 121 RHVFSSTSQINGPNYQRIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLD 180

Query: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQ 240
           DEGLLVLPAEERSAWLIRPQPHDMELDVHDSF+EKR+ENSESLLKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQ 240

Query: 241 NKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL 300
           NKKTARIL LAHRNMPLHWAGFAQRLQLLAANS VLRNTKLITPEVLL+WTSD+HRLLS 
Sbjct: 241 NKKTARILYLAHRNMPLHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSR 300

Query: 301 EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           EGK TSQ EFR+VMASGSLFSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGK-TSQQEFRNVMASGSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 ICM 364
           IC+
Sbjct: 361 ICL 362

[Close]

BLAST of Tan0018985 vs. NCBI nr
Match: XP_022963527.1 (mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita moschata])

HSP 1 Score: 661.8 bits (1706), Expect = 3.5e-186
Identity = 331/363 (91.18%), Postives = 347/363 (95.59%), Query Frame = 0


Query: 1   MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQ 60
           MAVSAQPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLW VQLSSSLNSA VSLPSVELA 
Sbjct: 1   MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60

Query: 61  LLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLN 120
           LLVSHICW+NHVPIMWKFLEKAMTA+IVPPLLVIALLSTRAIPYRKLRPAAYRLYLELL+
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLD 180
           RH+FS T ++NGPNY RIMQTIDDVLHLSQIFGLQTCEPGLL+VELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180

Query: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQ 240
           DEGLL LPAEERS WLIRPQPHDMELDVHDSF EK++ENSE+LLKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240

Query: 241 NKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL 300
           NKKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL WTSD+HR LS 
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQ 300

Query: 301 EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           EGKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKTKSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 ICM 364
           IC+
Sbjct: 361 ICL 363

[Close]

BLAST of Tan0018985 vs. NCBI nr
Match: XP_022967383.1 (mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita maxima])

HSP 1 Score: 660.2 bits (1702), Expect = 1.0e-185
Identity = 329/363 (90.63%), Postives = 348/363 (95.87%), Query Frame = 0


Query: 1   MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQ 60
           MAVSAQPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLW V LSSSLNSA VSLPSVELAQ
Sbjct: 1   MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVHLSSSLNSASVSLPSVELAQ 60

Query: 61  LLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLN 120
           LLVSHICW+NHVPIMWKFLEKAMTA+IVPPLLVIALLSTRAIPYRKLRPAAYRLYLELL+
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLD 180
           RH+FS T ++NGPNY RIMQTIDDVLHLSQIFGLQTCEPGLL+VELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLVVELFFSIVWHLLDASLD 180

Query: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQ 240
           DEGLL LPAEERS WLIRPQPH+MELDVH+SF EK++ENSE+LLKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHNMELDVHNSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240

Query: 241 NKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL 300
           NKKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL+WTSD+HR LS 
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQ 300

Query: 301 EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           EGKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKTASQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 ICM 364
           IC+
Sbjct: 361 ICL 363

[Close]

BLAST of Tan0018985 vs. NCBI nr
Match: KAG6571443.1 (Mediator of RNA polymerase II transcription subunit 33A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011209.1 Mediator of RNA polymerase II transcription subunit 33A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 657.9 bits (1696), Expect = 5.1e-185
Identity = 329/363 (90.63%), Postives = 346/363 (95.32%), Query Frame = 0


Query: 1   MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQ 60
           MAVSAQPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLW VQLSSSLNSA VSLPS+ELA 
Sbjct: 1   MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSLELAH 60

Query: 61  LLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLN 120
           LLVSHICW+NHVPIMWKFLEKAMTA+IVPPLLVIALLSTRAIPYRKLRPAAYRLYLELL+
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLD 180
           RH+FS T ++NGPNY RIMQTIDDVLHLSQIF LQTCEPGLL+VELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFDLQTCEPGLLMVELFFSIVWHLLDASLD 180

Query: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQ 240
           DEGLL LPAEERS WLIRPQPHDMELDVHDSF EK++ENSE+LLKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240

Query: 241 NKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL 300
           NKKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL WTSD+HR LS 
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQ 300

Query: 301 EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           EGKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKTKSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 ICM 364
           IC+
Sbjct: 361 ICL 363

[Close]

BLAST of Tan0018985 vs. ExPASy TrEMBL
Match: A0A6J1DPP9 (mediator of RNA polymerase II transcription subunit 33B-like OS=Momordica charantia OX=3673 GN=LOC111022676 PE=4 SV=1)

HSP 1 Score: 664.5 bits (1713), Expect = 2.6e-187
Identity = 335/363 (92.29%), Postives = 349/363 (96.14%), Query Frame = 0


Query: 1   MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQ 60
           M VS QPP QLQG+AGLWDSVLELTKSAQDKNCDPLLW VQLSSSLNSA VSLPS+ELAQ
Sbjct: 1   MVVSVQPPSQLQGMAGLWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQ 60

Query: 61  LLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLN 120
           LLVSHICW+NHVPIMWKFLEKAMTAKIVPPLLV+ALLSTRAIPYRKLRPAAYRLYLELL+
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLD 180
           RH+FS TS+INGPNYQRIMQTIDDVLHLSQIF LQ CEPGLL+VELFFSIVWQLLDASLD
Sbjct: 121 RHVFSSTSQINGPNYQRIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLD 180

Query: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQ 240
           DEGLLVLPAEERSAWLIRPQPHDMELDVHDSF+EKR+ENSESLLKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQ 240

Query: 241 NKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL 300
           NKKTARIL LAHRNMPLHWAGFAQRLQLLAANS VLRNTKLITPEVLL+WTSD+HRLLS 
Sbjct: 241 NKKTARILYLAHRNMPLHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSR 300

Query: 301 EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           EGK TSQ EFR+VMASGSLFSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGK-TSQQEFRNVMASGSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 ICM 364
           IC+
Sbjct: 361 ICL 362

[Close]

BLAST of Tan0018985 vs. ExPASy TrEMBL
Match: A0A6J1HFH4 (mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita moschata OX=3662 GN=LOC111463830 PE=4 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 1.7e-186
Identity = 331/363 (91.18%), Postives = 347/363 (95.59%), Query Frame = 0


Query: 1   MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQ 60
           MAVSAQPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLW VQLSSSLNSA VSLPSVELA 
Sbjct: 1   MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60

Query: 61  LLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLN 120
           LLVSHICW+NHVPIMWKFLEKAMTA+IVPPLLVIALLSTRAIPYRKLRPAAYRLYLELL+
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLD 180
           RH+FS T ++NGPNY RIMQTIDDVLHLSQIFGLQTCEPGLL+VELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180

Query: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQ 240
           DEGLL LPAEERS WLIRPQPHDMELDVHDSF EK++ENSE+LLKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240

Query: 241 NKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL 300
           NKKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL WTSD+HR LS 
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQ 300

Query: 301 EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           EGKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKTKSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 ICM 364
           IC+
Sbjct: 361 ICL 363

[Close]

BLAST of Tan0018985 vs. ExPASy TrEMBL
Match: A0A6J1HUY1 (mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita maxima OX=3661 GN=LOC111466930 PE=4 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 5.0e-186
Identity = 329/363 (90.63%), Postives = 348/363 (95.87%), Query Frame = 0


Query: 1   MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQ 60
           MAVSAQPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLW V LSSSLNSA VSLPSVELAQ
Sbjct: 1   MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVHLSSSLNSASVSLPSVELAQ 60

Query: 61  LLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLN 120
           LLVSHICW+NHVPIMWKFLEKAMTA+IVPPLLVIALLSTRAIPYRKLRPAAYRLYLELL+
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLD 180
           RH+FS T ++NGPNY RIMQTIDDVLHLSQIFGLQTCEPGLL+VELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLVVELFFSIVWHLLDASLD 180

Query: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQ 240
           DEGLL LPAEERS WLIRPQPH+MELDVH+SF EK++ENSE+LLKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHNMELDVHNSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240

Query: 241 NKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL 300
           NKKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL+WTSD+HR LS 
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQ 300

Query: 301 EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           EGKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKTASQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 ICM 364
           IC+
Sbjct: 361 ICL 363

[Close]

BLAST of Tan0018985 vs. ExPASy TrEMBL
Match: A0A1S3BMJ1 (mediator of RNA polymerase II transcription subunit 33B-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491278 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 2.8e-181
Identity = 325/363 (89.53%), Postives = 347/363 (95.59%), Query Frame = 0


Query: 1   MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQ 60
           MAVSAQPPGQLQGIAGLWD+VLE+TKSAQDKNCDPLLW VQLSS+LNSA VSLPSVELAQ
Sbjct: 1   MAVSAQPPGQLQGIAGLWDTVLEVTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQ 60

Query: 61  LLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLN 120
           LLVSHICW+NHVPIMWKFLEKAMTA+IVPPLLVIALLSTRAIPYRKL+PAAYRLYLELL+
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLQPAAYRLYLELLS 120

Query: 121 RHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLD 180
           RH+FS TS+I GPNYQRIMQTIDDVLHL+QIFGLQTCEPG+L+VELFFSIVWQLLDASLD
Sbjct: 121 RHVFSSTSQIYGPNYQRIMQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLD 180

Query: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQ 240
           DEGLL LP EE+SAWLIRPQ HDMELDVHDSF EK++ENSESLLKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLALPGEEKSAWLIRPQLHDMELDVHDSFGEKKTENSESLLKVNTAKAIEIIGQFLQ 240

Query: 241 NKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL 300
           NKKT RILCLA RNMPL WAGFAQRLQLL ANSVVL N KLITPEVLL+WTSD+++LLS 
Sbjct: 241 NKKTERILCLALRNMPLQWAGFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSQ 300

Query: 301 EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           +GK TSQLEFRDVM+SGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 KGK-TSQLEFRDVMSSGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 ICM 364
           IC+
Sbjct: 361 ICL 362

[Close]

BLAST of Tan0018985 vs. ExPASy TrEMBL
Match: A0A6P5RLL0 (mediator of RNA polymerase II transcription subunit 33B-like OS=Prunus avium OX=42229 GN=LOC110749869 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.7e-130
Identity = 245/360 (68.06%), Postives = 286/360 (79.44%), Query Frame = 0


Query: 1   MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQ 60
           MAVS Q P     ++ LWD+VL+LTKSAQDKN DPLLW VQLS+SLNSA V+LPSVELA 
Sbjct: 2   MAVSVQQP-----LSHLWDTVLQLTKSAQDKNSDPLLWAVQLSNSLNSAAVALPSVELAH 61

Query: 61  LLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLN 120
           LLVSHICW NHVPI WKFLEKA+T KIVPP+LV+ALLST+ +P R+L PAAYRLY+ELL 
Sbjct: 62  LLVSHICWANHVPITWKFLEKALTVKIVPPMLVLALLSTKVVPNRQLHPAAYRLYMELLK 121

Query: 121 RHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLD 180
           RH F   S++NGPN Q+I+++IDDVLHLSQ++GLQ CEPG++IVE  FSI+WQLLDASLD
Sbjct: 122 RHTFLFASQLNGPNCQKIIKSIDDVLHLSQLYGLQVCEPGVVIVEFVFSIIWQLLDASLD 181

Query: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQ 240
           DEGLL L  +++S W  RP+  DME+D HD FNEKRSE +E L K NTA AIEII + LQ
Sbjct: 182 DEGLLELTPDKKSRWSTRPE--DMEIDGHDCFNEKRSEQNEGLQKANTAMAIEIIVELLQ 241

Query: 241 NKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL 300
           NK T+RILCL  RN+P HW GF Q++Q+LAANS VLR  K ITPE LL  TSD  RLL+ 
Sbjct: 242 NKVTSRILCLTRRNLPSHWGGFIQKMQVLAANSSVLRTLKHITPESLLQLTSDTRRLLTR 301

Query: 301 EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           E K  SQ EF  V++SGSL SSA QSHGV+ SA WLPIDLFLEDAMDGS+V   SAVE L
Sbjct: 302 ECKIISQKEFHAVLSSGSLRSSASQSHGVSSSAFWLPIDLFLEDAMDGSEVAIISAVETL 354

[Close]

BLAST of Tan0018985 vs. TAIR 10
Match: AT3G23590.1 (REF4-related 1 )

HSP 1 Score: 315.1 bits (806), Expect = 7.6e-86
Identity = 165/342 (48.25%), Postives = 232/342 (67.84%), Query Frame = 0


Query: 17  LWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMW 76
           +WD V+ELTK AQ+   DP LW  QLSS+L    V LPS ELA+++VS+ICW+N+VPI+W
Sbjct: 9   VWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVW 68

Query: 77  KFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQ 136
           KFLE+AM  K+V PL+V+ALL+ R +P R  + AAYR+YLELL R++F++   I+GP+YQ
Sbjct: 69  KFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDHISGPHYQ 128

Query: 137 RIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 196
           ++M ++ ++L LS++F L T +PG+L+VE  F +V QLLDA+L DEGLL L  +  S WL
Sbjct: 129 KVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQDSSSQWL 188

Query: 197 IRPQPHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMP 256
           ++ Q  DME+D  + +NEK + + E L  +NT  AIE+I +FL+N   AR+L L   N  
Sbjct: 189 VKSQ--DMEIDAPERYNEK-TGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYLVSSNRA 248

Query: 257 LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSLEGKTTSQLEFRDVMAS 316
             W  F Q++QLL  NS  L+++K++    LL   S+     S + K TS  +   ++  
Sbjct: 249 SKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKSNAIVDF 308

Query: 317 GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVE 359
           GSL S AG  HG + S+LWLP+DL  EDAMDG QV  TSA+E
Sbjct: 309 GSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIE 347

[Close]

BLAST of Tan0018985 vs. TAIR 10
Match: AT2G48110.1 (reduced epidermal fluorescence 4 )

HSP 1 Score: 298.5 bits (763), Expect = 7.3e-81
Identity = 170/344 (49.42%), Postives = 212/344 (61.63%), Query Frame = 0


Query: 17  LWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMW 76
           LW+SV  L +SAQ+KN DPL W +QL  +L SA +SLPS +LAQ LV+HI WENH P+ W
Sbjct: 10  LWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSW 69

Query: 77  KFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQ 136
           K LEKA++  IVPPLLV+ALLS R IP RKL PAAYRLY+ELL RH FS    I  P Y 
Sbjct: 70  KLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAPGYH 129

Query: 137 RIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 196
           + M +IDD+LHLS+ FG+Q  EPG +++   FSIVW+LLDASLD+EGLL L + +RS W 
Sbjct: 130 KTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRSKW- 189

Query: 197 IRPQPHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMP 256
               PHDM+LD  ++ + KR+EN ++L K NT  AIE+I +FLQNK T+RIL LA +NM 
Sbjct: 190 -PSSPHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM- 249

Query: 257 LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSLEGKTTSQLEFRDVMAS 316
                                                       E KT  + EF  +++S
Sbjct: 250 --------------------------------------------ESKTIPRGEFHAIVSS 299

Query: 317 GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 361
           GS  +          SALWLPIDLF ED MDG+Q  A SAVE L
Sbjct: 310 GSKLALTSD------SALWLPIDLFFEDIMDGTQAAAASAVENL 299

The following BLAST results are available for this feature:

BLAST of Tan0018985 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUG9	1.1e-84	48.25	Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana ...	[more]
F4IN69	1.0e-79	49.42	Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana ...	[more]

BLAST of Tan0018985 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023554812.1	3.2e-187	91.46	mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita pepo sub...	[more]
XP_022155567.1	5.5e-187	92.29	mediator of RNA polymerase II transcription subunit 33B-like [Momordica charanti...	[more]
XP_022963527.1	3.5e-186	91.18	mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita moschata...	[more]
XP_022967383.1	1.0e-185	90.63	mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita maxima]	[more]
KAG6571443.1	5.1e-185	90.63	Mediator of RNA polymerase II transcription subunit 33A, partial [Cucurbita argy...	[more]

BLAST of Tan0018985 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPP9	2.6e-187	92.29	mediator of RNA polymerase II transcription subunit 33B-like OS=Momordica charan...	[more]
A0A6J1HFH4	1.7e-186	91.18	mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita moscha...	[more]
A0A6J1HUY1	5.0e-186	90.63	mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita maxima...	[more]
A0A1S3BMJ1	2.8e-181	89.53	mediator of RNA polymerase II transcription subunit 33B-like isoform X1 OS=Cucum...	[more]
A0A6P5RLL0	1.7e-130	68.06	mediator of RNA polymerase II transcription subunit 33B-like OS=Prunus avium OX=...	[more]

BLAST of Tan0018985 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23590.1	7.6e-86	48.25	REF4-related 1	[more]
AT2G48110.1	7.3e-81	49.42	reduced epidermal fluorescence 4	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33739:SF13	SUBFAMILY NOT NAMED	coord: 17..362
IPR039638	Mediator of RNA polymerase II transcription subunit 33A/B	PANTHER	PTHR33739	OS07G0681500 PROTEIN	coord: 17..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0018985.1	Tan0018985.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000762	regulation of phenylpropanoid metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016592	mediator complex