Tan0018942 (gene) Snake gourd v1

Overview
NameTan0018942
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein FAM110A like
LocationLG07: 9755986 .. 9757399 (-)
RNA-Seq ExpressionTan0018942
SyntenyTan0018942
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTTCTTTCAATTTCTTTTCGGATTGGCCGTAGTTAATGCACAGTGATTCCAACACGCTTTCTTTACGTCAATCAATTCGATTCAATTCGAACGAGATTACCAAATCAATCCAATTCAATCAATTCGAGACCTAGTCTCATTATGAATCAGACCGTCCTCCTCCGATCACCGCCTGGGACTCGCCAGCAACCGCTACTAAGCGACAAATCAGCCAGTAATAGAGTGAAGGAAAAACGGCGGTTCGCGGAGGTGGCCGGCGGAACGGCGGCCGAGTGCGCGGCAATTTGTTGTTGCTTTCCATGCAGCATGATGAATCTTCTGATATTGACGGTCTATAAAGTTCCAGTAGGGCTCTGCAAAAAGGTCTGGAATAAACAGAGACGAAAACGACGCCACATCTCTAATAAAAACAAGGCGGCCACGGCGGCCGGTGCAGGTATCGAGTGGCCGATTAATCATGACCGTCAAAAGGATCAGGATCAGGATCGAGATCGAGATCGGGGAGAATCATCGCTTCCGTCGTCGTATTTATCGTCGGAGGATATGGAATTGGAGGCGGCGATGTGGGACAGATTTTACGGTACAGGCTTCTGGAGAACACCGTCTCAGAGAGAGAACTAATTGTACAAATTTTGCTTCGACGTTCAACAAACACAACCAACGAGTTTTTTAGGGTTCATAATCAAACGATGAAGATCGTCGTATTCAAAGTTTTTTTTTTTTTTTTCTCTCTTATTTGAACGGGAAATTCTCGTTTCCTTTTCGAATGCGATTACAAAAATCAACATTCCATGTAGTCGAGATTATTGATTTTAGGTTATTTTGTTTTTAGTTATCTTTTTTATTTTCAAGAAATTTTCTGTCAGTTTAATATTTCATATATATTTTTCATTTTCTAGAATACTATTTTTGCCAATGTGTTTCTATGTTTTCTTACTTACCTTATACTTATATTTTCAAAAACCGAACTAAGTTTTGAAAACTGAAAAAAAGTAGTTTTGTTTTTTGTTTTTGTTTTTGAAATTTAGTAGAAAACTTAAATGGTGACTTAAAAATATGTAAATCATGGTAGAGAAAATGAAGCGGAATTGTGAAAAAATCAAACGGGTCTTAACTATAAACTTTTAAATTAGTACGGAGGGTTTTATCTATCATATTATGCTAACCCTATTATATTACTATAAAATAATTTCAATTTTTTTAATACAATAAGAATGGAGAGATTCAAACCACAAACTTCGTGATCTTTGATATGTTAGTCGAATTATGTTCTCCTTGCCAATTGTTATCATTTGATTGATTCTATTAACAAATAAATATGTACAATGATAGAAAGGTAATATATTTTACAAAATCAATCTTATAATATCACTGGTGAAA

mRNA sequence

TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTTCTTTCAATTTCTTTTCGGATTGGCCGTAGTTAATGCACAGTGATTCCAACACGCTTTCTTTACGTCAATCAATTCGATTCAATTCGAACGAGATTACCAAATCAATCCAATTCAATCAATTCGAGACCTAGTCTCATTATGAATCAGACCGTCCTCCTCCGATCACCGCCTGGGACTCGCCAGCAACCGCTACTAAGCGACAAATCAGCCAGTAATAGAGTGAAGGAAAAACGGCGGTTCGCGGAGGTGGCCGGCGGAACGGCGGCCGAGTGCGCGGCAATTTGTTGTTGCTTTCCATGCAGCATGATGAATCTTCTGATATTGACGGTCTATAAAGTTCCAGTAGGGCTCTGCAAAAAGGTCTGGAATAAACAGAGACGAAAACGACGCCACATCTCTAATAAAAACAAGGCGGCCACGGCGGCCGGTGCAGGTATCGAGTGGCCGATTAATCATGACCGTCAAAAGGATCAGGATCAGGATCGAGATCGAGATCGGGGAGAATCATCGCTTCCGTCGTCGTATTTATCGTCGGAGGATATGGAATTGGAGGCGGCGATGTGGGACAGATTTTACGGTACAGGCTTCTGGAGAACACCGTCTCAGAGAGAGAACTAATTGTACAAATTTTGCTTCGACGTTCAACAAACACAACCAACGAGTTTTTTAGGGTTCATAATCAAACGATGAAGATCGTCGTATTCAAAGTTTTTTTTTTTTTTTTCTCTCTTATTTGAACGGGAAATTCTCGTTTCCTTTTCGAATGCGATTACAAAAATCAACATTCCATGTAGTCGAGATTATTGATTTTAGGTTATTTTGTTTTTAGTTATCTTTTTTATTTTCAAGAAATTTTCTGTCAGTTTAATATTTCATATATATTTTTCATTTTCTAGAATACTATTTTTGCCAATGTGTTTCTATGTTTTCTTACTTACCTTATACTTATATTTTCAAAAACCGAACTAAGTTTTGAAAACTGAAAAAAAGTAGTTTTGTTTTTTGTTTTTGTTTTTGAAATTTAGTAGAAAACTTAAATGGTGACTTAAAAATATGTAAATCATGGTAGAGAAAATGAAGCGGAATTGTGAAAAAATCAAACGGGTCTTAACTATAAACTTTTAAATTAGTACGGAGGGTTTTATCTATCATATTATGCTAACCCTATTATATTACTATAAAATAATTTCAATTTTTTTAATACAATAAGAATGGAGAGATTCAAACCACAAACTTCGTGATCTTTGATATGTTAGTCGAATTATGTTCTCCTTGCCAATTGTTATCATTTGATTGATTCTATTAACAAATAAATATGTACAATGATAGAAAGGTAATATATTTTACAAAATCAATCTTATAATATCACTGGTGAAA

Coding sequence (CDS)

ATGAATCAGACCGTCCTCCTCCGATCACCGCCTGGGACTCGCCAGCAACCGCTACTAAGCGACAAATCAGCCAGTAATAGAGTGAAGGAAAAACGGCGGTTCGCGGAGGTGGCCGGCGGAACGGCGGCCGAGTGCGCGGCAATTTGTTGTTGCTTTCCATGCAGCATGATGAATCTTCTGATATTGACGGTCTATAAAGTTCCAGTAGGGCTCTGCAAAAAGGTCTGGAATAAACAGAGACGAAAACGACGCCACATCTCTAATAAAAACAAGGCGGCCACGGCGGCCGGTGCAGGTATCGAGTGGCCGATTAATCATGACCGTCAAAAGGATCAGGATCAGGATCGAGATCGAGATCGGGGAGAATCATCGCTTCCGTCGTCGTATTTATCGTCGGAGGATATGGAATTGGAGGCGGCGATGTGGGACAGATTTTACGGTACAGGCTTCTGGAGAACACCGTCTCAGAGAGAGAACTAA

Protein sequence

MNQTVLLRSPPGTRQQPLLSDKSASNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKVWNKQRRKRRHISNKNKAATAAGAGIEWPINHDRQKDQDQDRDRDRGESSLPSSYLSSEDMELEAAMWDRFYGTGFWRTPSQREN
Homology
BLAST of Tan0018942 vs. NCBI nr
Match: XP_038901895.1 (uncharacterized protein LOC120088573 [Benincasa hispida])

HSP 1 Score: 228.4 bits (581), Expect = 4.3e-56
Identity = 124/158 (78.48%), Postives = 130/158 (82.28%), Query Frame = 0

Query: 1   MNQTVLLRSPPGTRQQPLLSDKSASNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLL 60
           MNQ+VLL+SPPGTRQQPLL DKS  NRVKEKRRFAEVAGGTAA CAAICCCFPCSMMNLL
Sbjct: 1   MNQSVLLQSPPGTRQQPLLRDKS-GNRVKEKRRFAEVAGGTAAGCAAICCCFPCSMMNLL 60

Query: 61  ILTVYKVPVGLCKKVWNKQRRKRRHISNKNKAATAAGAGIEWPINHDRQKDQDQDRDRDR 120
           ILTVYKVPVGLCKKVWNK R KRR I+ KN     A AG EW  N DR+K+       DR
Sbjct: 61  ILTVYKVPVGLCKKVWNK-RGKRRQIAKKN-----AAAGKEWR-NDDREKE-------DR 120

Query: 121 GESSLPSSYLSSEDMELEAAMWDRFYGTGFWRTPSQRE 159
           GESSLPSSY SSEDMELE  MW+RFYGTGFWRTPSQRE
Sbjct: 121 GESSLPSSYFSSEDMELEKEMWERFYGTGFWRTPSQRE 143

BLAST of Tan0018942 vs. NCBI nr
Match: XP_023512462.1 (uncharacterized protein LOC111777213 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 2.4e-54
Identity = 123/160 (76.88%), Postives = 131/160 (81.88%), Query Frame = 0

Query: 1   MNQTVLLRSPPGTRQQPLLSDKSASNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLL 60
           MNQ VLLRSPP TRQQPLL+DKS  NR+KEK RFAEVAGGTAAECAAICCCFPCSMMNLL
Sbjct: 1   MNQNVLLRSPPETRQQPLLTDKS-PNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLL 60

Query: 61  ILTVYKVPVGLCKKVWNKQRRKRRHISNKNKAATAAGA--GIEWPINHDRQKDQDQDRDR 120
           ILTVYKVPVGLCKK WNK R KRRHI+ +NKAA A GA  G E P  HD +K+       
Sbjct: 61  ILTVYKVPVGLCKKAWNK-RGKRRHITKRNKAAAAGGATVGKEGP-KHDGEKE------- 120

Query: 121 DRGESSLPSSYLSSEDMELEAAMWDRFYGTGFWRTPSQRE 159
           D GE SLPSSYLSSED+ELE  MWD+FYGTGFWRTPSQRE
Sbjct: 121 DWGE-SLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRE 149

BLAST of Tan0018942 vs. NCBI nr
Match: KAG6570325.1 (hypothetical protein SDJN03_29240, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010219.1 hypothetical protein SDJN02_27011, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 222.2 bits (565), Expect = 3.1e-54
Identity = 123/161 (76.40%), Postives = 131/161 (81.37%), Query Frame = 0

Query: 1   MNQTVLLRSPPGTRQQPLLSDKSASNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLL 60
           MNQ VLLRSPP TRQQPLL+DKS  NR+KEK RFAEVAGGTAAECAAICCCFPCSMMNLL
Sbjct: 1   MNQNVLLRSPPETRQQPLLTDKS-PNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLL 60

Query: 61  ILTVYKVPVGLCKKVWNKQRRKRRHISNKNKAATAAG---AGIEWPINHDRQKDQDQDRD 120
           ILTVYKVPVGLCKK WNK R KRRHI+ +NKAA AAG    G E P  HD +K+      
Sbjct: 61  ILTVYKVPVGLCKKAWNK-RGKRRHITKRNKAAAAAGGATVGKEGP-KHDGEKE------ 120

Query: 121 RDRGESSLPSSYLSSEDMELEAAMWDRFYGTGFWRTPSQRE 159
            D GE SLPSSYLSSED+ELE  MWD+FYGTGFWRTPSQRE
Sbjct: 121 -DWGE-SLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRE 150

BLAST of Tan0018942 vs. NCBI nr
Match: XP_022986081.1 (uncharacterized protein LOC111483938 [Cucurbita maxima])

HSP 1 Score: 218.8 bits (556), Expect = 3.4e-53
Identity = 122/163 (74.85%), Postives = 131/163 (80.37%), Query Frame = 0

Query: 1   MNQTVLLRSPPGTRQQPLLSDKSASNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLL 60
           MNQ VLLRSPP TRQQPLL+DKS  NR+KEK RFAE+AGGTAAECAAICCCFPCSMMNLL
Sbjct: 1   MNQNVLLRSPPETRQQPLLTDKS-PNRLKEKPRFAELAGGTAAECAAICCCFPCSMMNLL 60

Query: 61  ILTVYKVPVGLCKKVWNKQRRKRRHISNKNKAATAAGA-----GIEWPINHDRQKDQDQD 120
           ILTVYKVPVGLCKK WN+ R KRRHI+ KNKAA AA A     G E P  HD +K+    
Sbjct: 61  ILTVYKVPVGLCKKAWNR-RGKRRHITKKNKAAAAATAGGATVGKEGP-KHDGEKE---- 120

Query: 121 RDRDRGESSLPSSYLSSEDMELEAAMWDRFYGTGFWRTPSQRE 159
              D GE SLPSSYLSSED+ELE  MWD+FYGTGFWRTPSQRE
Sbjct: 121 ---DWGE-SLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRE 152

BLAST of Tan0018942 vs. NCBI nr
Match: XP_022943329.1 (uncharacterized protein LOC111448127 [Cucurbita moschata])

HSP 1 Score: 218.4 bits (555), Expect = 4.5e-53
Identity = 121/159 (76.10%), Postives = 129/159 (81.13%), Query Frame = 0

Query: 1   MNQTVLLRSPPGTRQQPLLSDKSASNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLL 60
           MNQ VLLRSPP TRQQPLL+DKS  NR+KEK RFAEVAGGTAAECAAICCCFPCSMMNLL
Sbjct: 1   MNQNVLLRSPPETRQQPLLTDKS-PNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLL 60

Query: 61  ILTVYKVPVGLCKKVWNKQRRKRRHISNKNKAAT-AAGAGIEWPINHDRQKDQDQDRDRD 120
           ILTVYKVPVGLCKK WNK R KRRHI+ +NKAA   A  G E P  HD +K+       D
Sbjct: 61  ILTVYKVPVGLCKKAWNK-RGKRRHITKRNKAAAGGATVGKEGP-KHDGEKE-------D 120

Query: 121 RGESSLPSSYLSSEDMELEAAMWDRFYGTGFWRTPSQRE 159
            GE SLPSSYLSSED+ELE  MWD+FYGTGFWRTPSQRE
Sbjct: 121 WGE-SLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRE 148

BLAST of Tan0018942 vs. ExPASy TrEMBL
Match: A0A0A0L1Q3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G279850 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 7.4e-54
Identity = 121/158 (76.58%), Postives = 127/158 (80.38%), Query Frame = 0

Query: 1   MNQTVLLRSPPGTRQQPLLSDKSASNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLL 60
           MNQ VLLRSPPGTRQQPLL DKS  NRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLL
Sbjct: 1   MNQGVLLRSPPGTRQQPLLRDKS-GNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLL 60

Query: 61  ILTVYKVPVGLCKKVWNKQRRKRRHISNKNKAATAAGAGIEWPINHDRQKDQDQDRDRDR 120
           ILTVYKVPVGLCKKVWNK R KRR I+ KN    A   G EW  N D   +++     D 
Sbjct: 61  ILTVYKVPVGLCKKVWNK-RGKRREIAKKN----AGAGGKEWAGNDDGGGEKE-----DW 120

Query: 121 GESSLPSSYLSSEDMELEAAMWDRFYGTGFWRTPSQRE 159
           GE SLPSSYLSSED+ELE  MW+RFYGTGFWRTPSQRE
Sbjct: 121 GE-SLPSSYLSSEDIELEKEMWERFYGTGFWRTPSQRE 146

BLAST of Tan0018942 vs. ExPASy TrEMBL
Match: A0A6J1JA30 (uncharacterized protein LOC111483938 OS=Cucurbita maxima OX=3661 GN=LOC111483938 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.7e-53
Identity = 122/163 (74.85%), Postives = 131/163 (80.37%), Query Frame = 0

Query: 1   MNQTVLLRSPPGTRQQPLLSDKSASNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLL 60
           MNQ VLLRSPP TRQQPLL+DKS  NR+KEK RFAE+AGGTAAECAAICCCFPCSMMNLL
Sbjct: 1   MNQNVLLRSPPETRQQPLLTDKS-PNRLKEKPRFAELAGGTAAECAAICCCFPCSMMNLL 60

Query: 61  ILTVYKVPVGLCKKVWNKQRRKRRHISNKNKAATAAGA-----GIEWPINHDRQKDQDQD 120
           ILTVYKVPVGLCKK WN+ R KRRHI+ KNKAA AA A     G E P  HD +K+    
Sbjct: 61  ILTVYKVPVGLCKKAWNR-RGKRRHITKKNKAAAAATAGGATVGKEGP-KHDGEKE---- 120

Query: 121 RDRDRGESSLPSSYLSSEDMELEAAMWDRFYGTGFWRTPSQRE 159
              D GE SLPSSYLSSED+ELE  MWD+FYGTGFWRTPSQRE
Sbjct: 121 ---DWGE-SLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRE 152

BLAST of Tan0018942 vs. ExPASy TrEMBL
Match: A0A6J1FTZ9 (uncharacterized protein LOC111448127 OS=Cucurbita moschata OX=3662 GN=LOC111448127 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.2e-53
Identity = 121/159 (76.10%), Postives = 129/159 (81.13%), Query Frame = 0

Query: 1   MNQTVLLRSPPGTRQQPLLSDKSASNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLL 60
           MNQ VLLRSPP TRQQPLL+DKS  NR+KEK RFAEVAGGTAAECAAICCCFPCSMMNLL
Sbjct: 1   MNQNVLLRSPPETRQQPLLTDKS-PNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLL 60

Query: 61  ILTVYKVPVGLCKKVWNKQRRKRRHISNKNKAAT-AAGAGIEWPINHDRQKDQDQDRDRD 120
           ILTVYKVPVGLCKK WNK R KRRHI+ +NKAA   A  G E P  HD +K+       D
Sbjct: 61  ILTVYKVPVGLCKKAWNK-RGKRRHITKRNKAAAGGATVGKEGP-KHDGEKE-------D 120

Query: 121 RGESSLPSSYLSSEDMELEAAMWDRFYGTGFWRTPSQRE 159
            GE SLPSSYLSSED+ELE  MWD+FYGTGFWRTPSQRE
Sbjct: 121 WGE-SLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRE 148

BLAST of Tan0018942 vs. ExPASy TrEMBL
Match: A0A5D3DDP5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00690 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 6.3e-53
Identity = 122/158 (77.22%), Postives = 126/158 (79.75%), Query Frame = 0

Query: 1   MNQTVLLRSPPGTRQQPLLSDKSASNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLL 60
           MNQ VLLRSPPGTRQQPLL DKS  NRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLL
Sbjct: 1   MNQGVLLRSPPGTRQQPLLRDKS-GNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLL 60

Query: 61  ILTVYKVPVGLCKKVWNKQRRKRRHISNKNKAATAAGAGIEWPINHDRQKDQDQDRDRDR 120
           ILTVYKVPVGLCKKVWNK R KRR I+ KN  A   G   EW  N DR+K+       D 
Sbjct: 61  ILTVYKVPVGLCKKVWNK-RGKRREIAKKNAGAVVGGK--EWG-NDDREKE-------DW 120

Query: 121 GESSLPSSYLSSEDMELEAAMWDRFYGTGFWRTPSQRE 159
           GE SLPSSYLSSEDMELE  MW+RFYG GF RTPSQRE
Sbjct: 121 GE-SLPSSYLSSEDMELEKEMWERFYGNGFLRTPSQRE 145

BLAST of Tan0018942 vs. ExPASy TrEMBL
Match: A0A1S3BMC5 (uncharacterized protein LOC103491601 OS=Cucumis melo OX=3656 GN=LOC103491601 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.3e-52
Identity = 121/158 (76.58%), Postives = 125/158 (79.11%), Query Frame = 0

Query: 1   MNQTVLLRSPPGTRQQPLLSDKSASNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLL 60
           MNQ VLLRSPPGTRQQPLL DKS  N VKEKRRFAEVAGGTAAECAAICCCFPCSMMNLL
Sbjct: 1   MNQGVLLRSPPGTRQQPLLRDKS-GNIVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLL 60

Query: 61  ILTVYKVPVGLCKKVWNKQRRKRRHISNKNKAATAAGAGIEWPINHDRQKDQDQDRDRDR 120
           ILTVYKVPVGLCKKVWNK R KRR I+ KN  A   G   EW  N DR+K+       D 
Sbjct: 61  ILTVYKVPVGLCKKVWNK-RGKRREIAKKNAGAVVGGK--EWG-NDDREKE-------DW 120

Query: 121 GESSLPSSYLSSEDMELEAAMWDRFYGTGFWRTPSQRE 159
           GE SLPSSYLSSEDMELE  MW+RFYG GF RTPSQRE
Sbjct: 121 GE-SLPSSYLSSEDMELEKEMWERFYGNGFLRTPSQRE 145

BLAST of Tan0018942 vs. TAIR 10
Match: AT2G27180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 99 Blast hits to 99 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 108.6 bits (270), Expect = 4.6e-24
Identity = 63/161 (39.13%), Postives = 92/161 (57.14%), Query Frame = 0

Query: 1   MNQTVLLRSP---PGTRQQPLLSDKSASNRVKEKRRFAEVAGGTAAECAAICCCFPCSMM 60
           M + V+L+SP            S  S ++  KE+R+  EVAGG AAECAA+ CC PC+++
Sbjct: 1   MTRHVILKSPLLVSSEESTMRNSPPSTTSLSKERRKVGEVAGGAAAECAAVWCCCPCAVV 60

Query: 61  NLLILTVYKVPVGLCKKVWNKQRRKRRHISNKNKAATAAGAGIEWPINHDRQKDQDQDRD 120
           NL++L VYKVP  +CKK W + +R+R         A+A   G E  + H R  ++D   +
Sbjct: 61  NLMVLAVYKVPAAVCKKAWRRSKRRRFTRKRHGLLASATAEGSESTV-HARLNEEDLTAE 120

Query: 121 RDRGESSLPSSYLSSEDMELEAAMWDRFYGTGFWRTPSQRE 159
               E  +    L ++ + LE  M DRFYG GFWR+PSQ++
Sbjct: 121 IVFEECHVSGGEL-NDVVRLENEMLDRFYGAGFWRSPSQKD 159

BLAST of Tan0018942 vs. TAIR 10
Match: AT3G11690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast hits to 84 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-18
Identity = 59/172 (34.30%), Postives = 84/172 (48.84%), Query Frame = 0

Query: 14  RQQPLLSDKSASNRVKEK---RRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVG 73
           R+QPLL    +S   +        AE  GGT A CAA+ CC PC ++NLL+L +YKVP G
Sbjct: 31  RRQPLLQRSLSSPSPRASCGGSTPAEFCGGTTASCAAVWCCCPCGLVNLLVLAIYKVPKG 90

Query: 74  LCKKVWNKQRRKR---------RHISNKNKAATAAGAGIEWPINHDRQKDQDQDRDRDRG 133
           +C++    +RRK+              KN+         E+ I+     D   D D D  
Sbjct: 91  ICRRAIRSRRRKQLVKNGILPPLPTDGKNERMQRVFQNSEFAIHPLDSDDVSDDEDDDNF 150

Query: 134 ------ESSLPSSYLSSED--------MELEAAMWDRFYGTGFWRTPSQREN 160
                   S+ + + + E+        + LE  MW+RFYG GFWR+PSQRE+
Sbjct: 151 LDLKYIGKSVATGFTTEEETDEDDEAVLALEKEMWNRFYGAGFWRSPSQRES 202

BLAST of Tan0018942 vs. TAIR 10
Match: AT5G06380.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 82.0 bits (201), Expect = 4.7e-16
Identity = 45/124 (36.29%), Postives = 67/124 (54.03%), Query Frame = 0

Query: 35  AEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKVWNKQRRKRRHISNKNKAAT 94
           AE  GGT A CAA+C C PCS++NL++L VYK+P GLC++   + RRKR       ++  
Sbjct: 24  AECCGGTTASCAALCLCAPCSVVNLVVLAVYKLPRGLCRRAIRRIRRKRLAKKEFVESGR 83

Query: 95  AAGAGIEWPINHDRQKDQDQDRDRDRGESSLPSSYLSSEDMELEAAMWDRFYGTGFWRTP 154
             G G          + +D++ + +  + ++         + LE  MW RFY  GFWR+ 
Sbjct: 84  EFGRGGSSQFAVHPLESRDEEEEEEEEDEAV---------IALEKEMWSRFYSGGFWRSL 138

Query: 155 SQRE 159
           SQ E
Sbjct: 144 SQAE 138

BLAST of Tan0018942 vs. TAIR 10
Match: AT5G14690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01516.1); Has 86 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 2; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 7.0e-04
Identity = 25/69 (36.23%), Postives = 38/69 (55.07%), Query Frame = 0

Query: 32  RRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVP--VG-LCKKVWNKQRRKRRHISN 91
           +R    A    A+C A+CCC PC+++NLL LT+ KVP  +G  C     + ++KRR I  
Sbjct: 46  KRCRSWAAAAIADCVALCCC-PCAIINLLTLTLVKVPWMIGRRCLGGGGRNKKKRRVIHR 105

Query: 92  KNKAATAAG 98
           + +     G
Sbjct: 106 RKRRGNING 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038901895.14.3e-5678.48uncharacterized protein LOC120088573 [Benincasa hispida][more]
XP_023512462.12.4e-5476.88uncharacterized protein LOC111777213 [Cucurbita pepo subsp. pepo][more]
KAG6570325.13.1e-5476.40hypothetical protein SDJN03_29240, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022986081.13.4e-5374.85uncharacterized protein LOC111483938 [Cucurbita maxima][more]
XP_022943329.14.5e-5376.10uncharacterized protein LOC111448127 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A0A0L1Q37.4e-5476.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G279850 PE=4 SV=1[more]
A0A6J1JA301.7e-5374.85uncharacterized protein LOC111483938 OS=Cucurbita maxima OX=3661 GN=LOC111483938... [more]
A0A6J1FTZ92.2e-5376.10uncharacterized protein LOC111448127 OS=Cucurbita moschata OX=3662 GN=LOC1114481... [more]
A0A5D3DDP56.3e-5377.22Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BMC55.3e-5276.58uncharacterized protein LOC103491601 OS=Cucumis melo OX=3656 GN=LOC103491601 PE=... [more]
Match NameE-valueIdentityDescription
AT2G27180.14.6e-2439.13unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G11690.11.3e-1834.30unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G06380.14.7e-1636.29unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G14690.17.0e-0436.23unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR33264:SF33SUBFAMILY NOT NAMEDcoord: 1..159
NoneNo IPR availablePANTHERPTHR33264EXPRESSED PROTEINcoord: 1..159

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0018942.1Tan0018942.1mRNA