Tan0018942 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTTCTTTCAATTTCTTTTCGGATTGGCCGTAGTTAATGCACAGTGATTCCAACACGCTTTCTTTACGTCAATCAATTCGATTCAATTCGAACGAGATTACCAAATCAATCCAATTCAATCAATTCGAGACCTAGTCTCATTATGAATCAGACCGTCCTCCTCCGATCACCGCCTGGGACTCGCCAGCAACCGCTACTAAGCGACAAATCAGCCAGTAATAGAGTGAAGGAAAAACGGCGGTTCGCGGAGGTGGCCGGCGGAACGGCGGCCGAGTGCGCGGCAATTTGTTGTTGCTTTCCATGCAGCATGATGAATCTTCTGATATTGACGGTCTATAAAGTTCCAGTAGGGCTCTGCAAAAAGGTCTGGAATAAACAGAGACGAAAACGACGCCACATCTCTAATAAAAACAAGGCGGCCACGGCGGCCGGTGCAGGTATCGAGTGGCCGATTAATCATGACCGTCAAAAGGATCAGGATCAGGATCGAGATCGAGATCGGGGAGAATCATCGCTTCCGTCGTCGTATTTATCGTCGGAGGATATGGAATTGGAGGCGGCGATGTGGGACAGATTTTACGGTACAGGCTTCTGGAGAACACCGTCTCAGAGAGAGAACTAATTGTACAAATTTTGCTTCGACGTTCAACAAACACAACCAACGAGTTTTTTAGGGTTCATAATCAAACGATGAAGATCGTCGTATTCAAAGTTTTTTTTTTTTTTTTCTCTCTTATTTGAACGGGAAATTCTCGTTTCCTTTTCGAATGCGATTACAAAAATCAACATTCCATGTAGTCGAGATTATTGATTTTAGGTTATTTTGTTTTTAGTTATCTTTTTTATTTTCAAGAAATTTTCTGTCAGTTTAATATTTCATATATATTTTTCATTTTCTAGAATACTATTTTTGCCAATGTGTTTCTATGTTTTCTTACTTACCTTATACTTATATTTTCAAAAACCGAACTAAGTTTTGAAAACTGAAAAAAAGTAGTTTTGTTTTTTGTTTTTGTTTTTGAAATTTAGTAGAAAACTTAAATGGTGACTTAAAAATATGTAAATCATGGTAGAGAAAATGAAGCGGAATTGTGAAAAAATCAAACGGGTCTTAACTATAAACTTTTAAATTAGTACGGAGGGTTTTATCTATCATATTATGCTAACCCTATTATATTACTATAAAATAATTTCAATTTTTTTAATACAATAAGAATGGAGAGATTCAAACCACAAACTTCGTGATCTTTGATATGTTAGTCGAATTATGTTCTCCTTGCCAATTGTTATCATTTGATTGATTCTATTAACAAATAAATATGTACAATGATAGAAAGGTAATATATTTTACAAAATCAATCTTATAATATCACTGGTGAAA TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTTCTTTCAATTTCTTTTCGGATTGGCCGTAGTTAATGCACAGTGATTCCAACACGCTTTCTTTACGTCAATCAATTCGATTCAATTCGAACGAGATTACCAAATCAATCCAATTCAATCAATTCGAGACCTAGTCTCATTATGAATCAGACCGTCCTCCTCCGATCACCGCCTGGGACTCGCCAGCAACCGCTACTAAGCGACAAATCAGCCAGTAATAGAGTGAAGGAAAAACGGCGGTTCGCGGAGGTGGCCGGCGGAACGGCGGCCGAGTGCGCGGCAATTTGTTGTTGCTTTCCATGCAGCATGATGAATCTTCTGATATTGACGGTCTATAAAGTTCCAGTAGGGCTCTGCAAAAAGGTCTGGAATAAACAGAGACGAAAACGACGCCACATCTCTAATAAAAACAAGGCGGCCACGGCGGCCGGTGCAGGTATCGAGTGGCCGATTAATCATGACCGTCAAAAGGATCAGGATCAGGATCGAGATCGAGATCGGGGAGAATCATCGCTTCCGTCGTCGTATTTATCGTCGGAGGATATGGAATTGGAGGCGGCGATGTGGGACAGATTTTACGGTACAGGCTTCTGGAGAACACCGTCTCAGAGAGAGAACTAATTGTACAAATTTTGCTTCGACGTTCAACAAACACAACCAACGAGTTTTTTAGGGTTCATAATCAAACGATGAAGATCGTCGTATTCAAAGTTTTTTTTTTTTTTTTCTCTCTTATTTGAACGGGAAATTCTCGTTTCCTTTTCGAATGCGATTACAAAAATCAACATTCCATGTAGTCGAGATTATTGATTTTAGGTTATTTTGTTTTTAGTTATCTTTTTTATTTTCAAGAAATTTTCTGTCAGTTTAATATTTCATATATATTTTTCATTTTCTAGAATACTATTTTTGCCAATGTGTTTCTATGTTTTCTTACTTACCTTATACTTATATTTTCAAAAACCGAACTAAGTTTTGAAAACTGAAAAAAAGTAGTTTTGTTTTTTGTTTTTGTTTTTGAAATTTAGTAGAAAACTTAAATGGTGACTTAAAAATATGTAAATCATGGTAGAGAAAATGAAGCGGAATTGTGAAAAAATCAAACGGGTCTTAACTATAAACTTTTAAATTAGTACGGAGGGTTTTATCTATCATATTATGCTAACCCTATTATATTACTATAAAATAATTTCAATTTTTTTAATACAATAAGAATGGAGAGATTCAAACCACAAACTTCGTGATCTTTGATATGTTAGTCGAATTATGTTCTCCTTGCCAATTGTTATCATTTGATTGATTCTATTAACAAATAAATATGTACAATGATAGAAAGGTAATATATTTTACAAAATCAATCTTATAATATCACTGGTGAAA ATGAATCAGACCGTCCTCCTCCGATCACCGCCTGGGACTCGCCAGCAACCGCTACTAAGCGACAAATCAGCCAGTAATAGAGTGAAGGAAAAACGGCGGTTCGCGGAGGTGGCCGGCGGAACGGCGGCCGAGTGCGCGGCAATTTGTTGTTGCTTTCCATGCAGCATGATGAATCTTCTGATATTGACGGTCTATAAAGTTCCAGTAGGGCTCTGCAAAAAGGTCTGGAATAAACAGAGACGAAAACGACGCCACATCTCTAATAAAAACAAGGCGGCCACGGCGGCCGGTGCAGGTATCGAGTGGCCGATTAATCATGACCGTCAAAAGGATCAGGATCAGGATCGAGATCGAGATCGGGGAGAATCATCGCTTCCGTCGTCGTATTTATCGTCGGAGGATATGGAATTGGAGGCGGCGATGTGGGACAGATTTTACGGTACAGGCTTCTGGAGAACACCGTCTCAGAGAGAGAACTAA MNQTVLLRSPPGTRQQPLLSDKSASNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKVWNKQRRKRRHISNKNKAATAAGAGIEWPINHDRQKDQDQDRDRDRGESSLPSSYLSSEDMELEAAMWDRFYGTGFWRTPSQREN Homology
BLAST of Tan0018942 vs. NCBI nr
Match: XP_038901895.1 (uncharacterized protein LOC120088573 [Benincasa hispida]) HSP 1 Score: 228.4 bits (581), Expect = 4.3e-56 Identity = 124/158 (78.48%), Postives = 130/158 (82.28%), Query Frame = 0
BLAST of Tan0018942 vs. NCBI nr
Match: XP_023512462.1 (uncharacterized protein LOC111777213 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 222.6 bits (566), Expect = 2.4e-54 Identity = 123/160 (76.88%), Postives = 131/160 (81.88%), Query Frame = 0
BLAST of Tan0018942 vs. NCBI nr
Match: KAG6570325.1 (hypothetical protein SDJN03_29240, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010219.1 hypothetical protein SDJN02_27011, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 222.2 bits (565), Expect = 3.1e-54 Identity = 123/161 (76.40%), Postives = 131/161 (81.37%), Query Frame = 0
BLAST of Tan0018942 vs. NCBI nr
Match: XP_022986081.1 (uncharacterized protein LOC111483938 [Cucurbita maxima]) HSP 1 Score: 218.8 bits (556), Expect = 3.4e-53 Identity = 122/163 (74.85%), Postives = 131/163 (80.37%), Query Frame = 0
BLAST of Tan0018942 vs. NCBI nr
Match: XP_022943329.1 (uncharacterized protein LOC111448127 [Cucurbita moschata]) HSP 1 Score: 218.4 bits (555), Expect = 4.5e-53 Identity = 121/159 (76.10%), Postives = 129/159 (81.13%), Query Frame = 0
BLAST of Tan0018942 vs. ExPASy TrEMBL
Match: A0A0A0L1Q3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G279850 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 7.4e-54 Identity = 121/158 (76.58%), Postives = 127/158 (80.38%), Query Frame = 0
BLAST of Tan0018942 vs. ExPASy TrEMBL
Match: A0A6J1JA30 (uncharacterized protein LOC111483938 OS=Cucurbita maxima OX=3661 GN=LOC111483938 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.7e-53 Identity = 122/163 (74.85%), Postives = 131/163 (80.37%), Query Frame = 0
BLAST of Tan0018942 vs. ExPASy TrEMBL
Match: A0A6J1FTZ9 (uncharacterized protein LOC111448127 OS=Cucurbita moschata OX=3662 GN=LOC111448127 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 2.2e-53 Identity = 121/159 (76.10%), Postives = 129/159 (81.13%), Query Frame = 0
BLAST of Tan0018942 vs. ExPASy TrEMBL
Match: A0A5D3DDP5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00690 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 6.3e-53 Identity = 122/158 (77.22%), Postives = 126/158 (79.75%), Query Frame = 0
BLAST of Tan0018942 vs. ExPASy TrEMBL
Match: A0A1S3BMC5 (uncharacterized protein LOC103491601 OS=Cucumis melo OX=3656 GN=LOC103491601 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 5.3e-52 Identity = 121/158 (76.58%), Postives = 125/158 (79.11%), Query Frame = 0
BLAST of Tan0018942 vs. TAIR 10
Match: AT2G27180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 99 Blast hits to 99 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 108.6 bits (270), Expect = 4.6e-24 Identity = 63/161 (39.13%), Postives = 92/161 (57.14%), Query Frame = 0
BLAST of Tan0018942 vs. TAIR 10
Match: AT3G11690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast hits to 84 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 90.5 bits (223), Expect = 1.3e-18 Identity = 59/172 (34.30%), Postives = 84/172 (48.84%), Query Frame = 0
BLAST of Tan0018942 vs. TAIR 10
Match: AT5G06380.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 82.0 bits (201), Expect = 4.7e-16 Identity = 45/124 (36.29%), Postives = 67/124 (54.03%), Query Frame = 0
BLAST of Tan0018942 vs. TAIR 10
Match: AT5G14690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01516.1); Has 86 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 2; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 41.6 bits (96), Expect = 7.0e-04 Identity = 25/69 (36.23%), Postives = 38/69 (55.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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