Tan0018849 (gene) Snake gourd v1

Overview


Name	Tan0018849
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	30S ribosomal protein S11
Location	LG01: 4663888 .. 4666638 (+)
RNA-Seq Expression	Tan0018849
Synteny	Tan0018849

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCATTTATGGAAAAGCCAACTCATAAGAAGCCTCATCCACTCATAAAAGAAGGAGATAGAAGCACTATAATTGGCCAGACAAAGAAATTAGGGTTTTTTTTCCCAGCATTTCGTACCCCCGGAACCAACGCCGGCGGCAGACGACGACGATGCGTAGACTTCCCCTCTCTCACCTCTCTTCTCTCTTTCGTTCTTCCTCTCTCTCTCATGGCGGCTCTTCTTTTTCTCCTTCTCGCCTTTCCATTTCCCCATTTCCTGGCTCAGATGCTCGATCTCACCGATCAGATCTCACTGGATCCGTTCAACTAGACAAGCAGGTTTTAGGTGAACTATATTCTTTACTTGCTATCTGATTCGGGAAATCACAATTATGCACACTTATAAATTCTGTTGTGAATGGGGTTTGGCTTTTAGATTATAGGAGAAGTTTGCTAGAGTGATTGAGATGATTTCTTATAGAATCTATTGATGTTAACGATTCAATGCTATTGTTTCTCACTAAAGAGAGAAAAACTTAAACGATGTCATTTTTTCTGGCAGTGTGAATTTATTGAGTGTTTTCTTTTGCGGATTGCAGGCTGTCTCGACCTTCCACAAGGTGATTCTGTGAATGTTGGACGGGAGATTGTAGGAAGTGCATGGAAAGCCTTGGGAGCTCAGGGGCCTTGTTGGGGTTTGGCACGTTCGAGTGGAAGTGTCTCTGTTCCTCATTCTACTAGCTGTAGATGTTATGTACACTACGGAAGCGGGCCAAATGCTGATACAGGAAGGAATCTTAAGTCCATGAGCTTTGTCAGGGGAATTTTAGAGGAAGACGGAACGGATTTTATGGGGAGTTCTCAGTTCCCTAGACCACCCAATATGGAGCACAATGCTGATATTGTCCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTCACAGATAACAAGGGAAATACAAAGCTTAAGGCCTCTGCTGGTCGTCTAGAAGAGCTGAAAGGAGGGCCTAAACTGTCCCGTTATGCTGCTGAAGCAATTGCAGAGTATGTTGGTCGTGAATCTAGAAAATTGGGGTTGAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTATTTTAAGAAAAAAAGGCAAGCGATTATGAGTTGGAGAGACGGTTTTACAGATTCTAGAAGTGATCAAAATCCGATTGTTTACATTGAAGATACTACAAGACGTGCCCACAATGGTTGCCGACTCCCAAAGCAACGCCGTGTCTAGGCGTATGGGGCTGGAATCTTGCTAATGCAACAACAAAGTGACAATGAGGTCTTTTTTTCTATCTTTGTTGGGAAATTTTCCTGGTTCTAATTGATGTAGCTTGCCTTCCAAGTTTTTACTTGCTTATTGCAATAATGATGACAATTAGATGTTTTTCTTATATACATTAGTGTAAAATTTTCCCGGTTGTAATTGATGTAGCTTGCAAGTTTTTACTTATTACAGTAACGATGACAATGAGATGTTTTTATATACACAAGGTGTAAAATAAGTGTCTTTTTTTTTTGTTTGAGTTGAACATCACATGGACTTGGGGGATTCAAATTTATGATCTCTTAATTGAGGATACATGCCTAAACCAATTGAAGATATGCTGACGTTGGCAATGGTTCCGTTTGGATTTCATTTCCATAGATATATGATATAGACTTTTTCCACGCAGTTGTATACCATCAAGAAGTGGAGTGGCCCCAGTTAACTAATCTTTTTACTTGGAAGTTTATTTTCTTCTCTGTAACATTCTATAGACTCTGTTGTGGATTACCATTTCTTGGATCTTACTTCTGTTCTCGTCAGTTCTCTCTCTTACCCCCTGCTGCTTGGAATTCTTGCGTAAAAGATATTGGTCTCTAAAAGGCAAGGAAGGGATTTGACCAATTTCTTTGTGTGCTGAAATTTTTATGTAGATTTGCAGGCTTTTTGATCATTGATGGTGGATTTGTACTCTGGTTCTGGAATCTCAGCATGGATGGTCACATGGGCACAGCAAGGAGATTCTGAATTGTTTGCTAACAGAGGATTTTACCAAACATTCCAGAACCAGAAGGAAGGTGTTCCATGCGTTTGTTCCTTAGTATGATGATTTATTTGAAGTTGCTGCGGCGCTCATGTTTGCGTACTGAACCTTTTTCTGGCGATGTGATATCTGATATGGAACTGAATAATGTTGTTAGACACGAATTTGTCACTTCTTTTTTCTATGTATGTTTATAAACGTATGAGTTTATGAAAAGACATCAGTGTGAAAAGAAAACTGACATGAAATCTTAATTAATTGTTATTATTTTTAATCTTAATCTACAATCCACTTGGTAATTTAGTGTCAGCTGGGTTTTTGCTAATTCAGTCTTTGAGAATGTTTCTCAATTATTGGTGGGTCTTAGTTTAAGCTCCAGGGCAAAGGTGTGTGGGGTCAAAGCTTTCATATCAGAATTATGGTTTGAAAGAAATCAGAGATTGTTTGAAGATAAGAGGCTAGAGTAGACAAGAAGATTTGATTCAATCATCTCGAAGGTTTCCTCTTGGAGTTCCCTTTGTAAGGAATTTGCACGCTACTCCATATCAGATTTGTGTTTTTCTTGACAATCCTTTTTGTTTTAATGCCTAGTATTGGTTTAGTTTATTTTATTTTGCTGGATTGATTTCTTCTTTCTGGGATACTGTGATTTCTTTTTATTATATTATTATGTACGTTCATTACATCAATGAAATTATTTTGTCACCTTTCAT

mRNA sequence

GCATTTATGGAAAAGCCAACTCATAAGAAGCCTCATCCACTCATAAAAGAAGGAGATAGAAGCACTATAATTGGCCAGACAAAGAAATTAGGGTTTTTTTTCCCAGCATTTCGTACCCCCGGAACCAACGCCGGCGGCAGACGACGACGATGCGTAGACTTCCCCTCTCTCACCTCTCTTCTCTCTTTCGTTCTTCCTCTCTCTCTCATGGCGGCTCTTCTTTTTCTCCTTCTCGCCTTTCCATTTCCCCATTTCCTGGCTCAGATGCTCGATCTCACCGATCAGATCTCACTGGATCCGTTCAACTAGACAAGCAGGTTTTAGGCTGTCTCGACCTTCCACAAGGTGATTCTGTGAATGTTGGACGGGAGATTGTAGGAAGTGCATGGAAAGCCTTGGGAGCTCAGGGGCCTTGTTGGGGTTTGGCACGTTCGAGTGGAAGTGTCTCTGTTCCTCATTCTACTAGCTGTAGATGTTATGTACACTACGGAAGCGGGCCAAATGCTGATACAGGAAGGAATCTTAAGTCCATGAGCTTTGTCAGGGGAATTTTAGAGGAAGACGGAACGGATTTTATGGGGAGTTCTCAGTTCCCTAGACCACCCAATATGGAGCACAATGCTGATATTGTCCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTCACAGATAACAAGGGAAATACAAAGCTTAAGGCCTCTGCTGGTCGTCTAGAAGAGCTGAAAGGAGGGCCTAAACTGTCCCGTTATGCTGCTGAAGCAATTGCAGAGTATGTTGGTCGTGAATCTAGAAAATTGGGGTTGAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTATTTTAAGAAAAAAAGGCAAGCGATTATGAGTTGGAGAGACGGTTTTACAGATTCTAGAAGTGATCAAAATCCGATTGTTTACATTGAAGATACTACAAGACGTGCCCACAATGGTTGCCGACTCCCAAAGCAACGCCGTGTCTAGGCGTATGGGGCTGGAATCTTGCTAATGCAACAACAAAGTGACAATGAGATTTGCAGGCTTTTTGATCATTGATGGTGGATTTGTACTCTGGTTCTGGAATCTCAGCATGGATGGTCACATGGGCACAGCAAGGAGATTCTGAATTGTTTGCTAACAGAGGATTTTACCAAACATTCCAGAACCAGAAGGAAGGTGTTCCATGCGTTTGTTCCTTAGTATGATGATTTATTTGAAGTTGCTGCGGCGCTCATGTTTGCGTACTGAACCTTTTTCTGGCGATGTGATATCTGATATGGAACTGAATAATGTTGTTAGACACGAATTTGTCACTTCTTTTTTCTATGTATGTTTATAAACGTATGAGTTTATGAAAAGACATCAGTGTGAAAAGAAAACTGACATGAAATCTTAATTAATTGTTATTATTTTTAATCTTAATCTACAATCCACTTGGTAATTTAGTGTCAGCTGGGTTTTTGCTAATTCAGTCTTTGAGAATGTTTCTCAATTATTGGTGGGTCTTAGTTTAAGCTCCAGGGCAAAGGTGTGTGGGGTCAAAGCTTTCATATCAGAATTATGGTTTGAAAGAAATCAGAGATTGTTTGAAGATAAGAGGCTAGAGTAGACAAGAAGATTTGATTCAATCATCTCGAAGGTTTCCTCTTGGAGTTCCCTTTGTAAGGAATTTGCACGCTACTCCATATCAGATTTGTGTTTTTCTTGACAATCCTTTTTGTTTTAATGCCTAGTATTGGTTTAGTTTATTTTATTTTGCTGGATTGATTTCTTCTTTCTGGGATACTGTGATTTCTTTTTATTATATTATTATGTACGTTCATTACATCAATGAAATTATTTTGTCACCTTTCAT

Coding sequence (CDS)

ATGCGTAGACTTCCCCTCTCTCACCTCTCTTCTCTCTTTCGTTCTTCCTCTCTCTCTCATGGCGGCTCTTCTTTTTCTCCTTCTCGCCTTTCCATTTCCCCATTTCCTGGCTCAGATGCTCGATCTCACCGATCAGATCTCACTGGATCCGTTCAACTAGACAAGCAGGTTTTAGGCTGTCTCGACCTTCCACAAGGTGATTCTGTGAATGTTGGACGGGAGATTGTAGGAAGTGCATGGAAAGCCTTGGGAGCTCAGGGGCCTTGTTGGGGTTTGGCACGTTCGAGTGGAAGTGTCTCTGTTCCTCATTCTACTAGCTGTAGATGTTATGTACACTACGGAAGCGGGCCAAATGCTGATACAGGAAGGAATCTTAAGTCCATGAGCTTTGTCAGGGGAATTTTAGAGGAAGACGGAACGGATTTTATGGGGAGTTCTCAGTTCCCTAGACCACCCAATATGGAGCACAATGCTGATATTGTCCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTCACAGATAACAAGGGAAATACAAAGCTTAAGGCCTCTGCTGGTCGTCTAGAAGAGCTGAAAGGAGGGCCTAAACTGTCCCGTTATGCTGCTGAAGCAATTGCAGAGTATGTTGGTCGTGAATCTAGAAAATTGGGGTTGAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTATTTTAAGAAAAAAAGGCAAGCGATTATGAGTTGGAGAGACGGTTTTACAGATTCTAGAAGTGATCAAAATCCGATTGTTTACATTGAAGATACTACAAGACGTGCCCACAATGGTTGCCGACTCCCAAAGCAACGCCGTGTCTAG

Protein sequence

MRRLPLSHLSSLFRSSSLSHGGSSFSPSRLSISPFPGSDARSHRSDLTGSVQLDKQVLGCLDLPQGDSVNVGREIVGSAWKALGAQGPCWGLARSSGSVSVPHSTSCRCYVHYGSGPNADTGRNLKSMSFVRGILEEDGTDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

Homology

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BLAST of Tan0018849 vs. ExPASy Swiss-Prot
Match: Q8VZT8 (Probable ribosomal protein S11, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD3 PE=1 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.0e-50
Identity = 101/192 (52.60%), Postives = 141/192 (73.44%), Query Frame = 0


Query: 91  GLARSSGS-VSVPHSTSCRCYVHYGS--GPNADTGRNLKSMSFVRGILEEDGTDFMGSSQ 150
           GL  + GS  S P  +S   +    S    N+ +G     + FVR ++E++G    G   
Sbjct: 123 GLPNTGGSGFSAPSLSSYENFTQSSSLLKENSRSGGKSSDLDFVREVIEDEGRRTAGIFS 182

Query: 151 FPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAI 210
             + PN+E NADI+H+K++RNNTF+TVTD+KGN K KA++G L +LKGG K++ Y A+A 
Sbjct: 183 HFQRPNLETNADIIHIKMLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGRKMTNYTADAT 242

Query: 211 AEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRA 270
           AE +GR ++ +GLKSVV++V GFT+F KK++AI+++RDGFT+SRSDQNPIVYIEDTTR+A
Sbjct: 243 AENIGRRAKAMGLKSVVVKVNGFTHFGKKKKAIIAFRDGFTNSRSDQNPIVYIEDTTRKA 302

Query: 271 HNGCRLPKQRRV 280
           HNGCRLP++RRV
Sbjct: 303 HNGCRLPRKRRV 314

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BLAST of Tan0018849 vs. ExPASy Swiss-Prot
Match: P46746 (Ribosomal protein S11, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS11 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-11
Identity = 45/126 (35.71%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 154 MEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGR 213
           +E  + IVH++   NNT IT+TD +GNT+   SAG L   K   K + YA+ A AE +  
Sbjct: 13  IEKKSGIVHIQSTTNNTLITLTDLEGNTQFFVSAGTL-GFKNSRKSTVYASGAAAEALAS 72

Query: 214 ESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRL 273
           ++   G +++++++KG  Y KK               +     I  I++ T  AHNGCR 
Sbjct: 73  KAFNEGYRTIIVKIKGLGYGKK---------SAIRGLQKSNLVIKQIQEVTPIAHNGCRP 128

Query: 274 PKQRRV 280
           PK+RRV
Sbjct: 133 PKKRRV 128

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BLAST of Tan0018849 vs. ExPASy Swiss-Prot
Match: A8ETK4 (30S ribosomal protein S11 OS=Arcobacter butzleri (strain RM4018) OX=367737 GN=rpsK PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10
Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 0


Query: 160 IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLG 219
           IVH+    NNT +TVTDN GN    +SAG L   KG  K + +AA+A  E    ++ + G
Sbjct: 20  IVHIAASFNNTMVTVTDNAGNAIAWSSAGNL-GFKGSKKSTPFAAQAAVEDAMNKAMEHG 79

Query: 220 LKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 279
           +K+V ++++G    +      +   DG          + +++D T  AHNGCR PK+RRV
Sbjct: 80  IKNVGIKIQGPGSGRDTAVKAVGSMDGVR--------VTWLKDVTPLAHNGCRPPKRRRV 130

[Close]

BLAST of Tan0018849 vs. ExPASy Swiss-Prot
Match: A5D5E6 (30S ribosomal protein S11 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) OX=370438 GN=rpsK PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10
Identity = 47/120 (39.17%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 160 IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLG 219
           + H+K   NNT +T+TD KGNT   +SAG++   KG  K + +AA+  AE   RE+ + G
Sbjct: 20  VAHIKSTFNNTIVTITDTKGNTISWSSAGQV-GFKGSRKSTPFAAQMAAESAAREAMEHG 79

Query: 220 LKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 279
           LK V + VKG      +  AI S +    +       +  I+D T   HNGCR PK+RRV
Sbjct: 80  LKEVEVMVKG--PGAGREAAIRSLQAAGLE-------VNLIKDVTPIPHNGCRPPKRRRV 129

[Close]

BLAST of Tan0018849 vs. ExPASy Swiss-Prot
Match: Q0BYD7 (30S ribosomal protein S11 OS=Hyphomonas neptunium (strain ATCC 15444) OX=228405 GN=rpsK PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.0e-10
Identity = 45/120 (37.50%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 160 IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLG 219
           IVHV    NNT +T+TD +GNT   +S+G +   KG  K + YAA+  AE   +++++ G
Sbjct: 20  IVHVNSSFNNTMVTITDAQGNTISWSSSG-VMNFKGSRKSTPYAAQMAAEDAAKKAKEHG 79

Query: 220 LKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 279
           L++V +RV+G    ++     +    G T        +  I DTT   HNGCR PK+RRV
Sbjct: 80  LQTVEVRVRGPGSGRESALRALQ-AAGLT--------VTAINDTTPIPHNGCRPPKRRRV 129

[Close]

BLAST of Tan0018849 vs. NCBI nr
Match: XP_022999735.1 (probable ribosomal protein S11, mitochondrial [Cucurbita maxima])

HSP 1 Score: 485.7 bits (1249), Expect = 2.6e-133
Identity = 249/287 (86.76%), Postives = 262/287 (91.29%), Query Frame = 0


Query: 1   MRRLPLSHLSSLFRSSSLSHGGSSFSPSRLSISPFPGSDAR--------SHRSDLTGSVQ 60
           MRRLPL HLSSLFRSSSLSH GSSFS SR+SISPF G+D R        SH SDL+GSVQ
Sbjct: 1   MRRLPLPHLSSLFRSSSLSH-GSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQ 60

Query: 61  LDKQVLGCLDLPQGDSVNVGREIVGSAWKALGAQGPCWGLARSSGSVSVPHSTSCRCYVH 120
           LD+Q  GC+DLP+GDSVNVGREIVG AWKALGAQGPCWGLARSS +VSVP+S+S RCYVH
Sbjct: 61  LDRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVH 120

Query: 121 YGSGPNADTGRNLKSMSFVRGILEEDGTDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180
           Y   PNADTGRN KSM+FVRGILEEDG +FMGSSQFPRPPNMEHNADIVHVKLMRNNTFI
Sbjct: 121 YDGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180

Query: 181 TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTY 240
           TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEA AEYVGRESRKLGLKSVVMRVKGFTY
Sbjct: 181 TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTY 240

Query: 241 FKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 280
           FKKK+QAI+SWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 FKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of Tan0018849 vs. NCBI nr
Match: XP_022942058.1 (probable ribosomal protein S11, mitochondrial [Cucurbita moschata])

HSP 1 Score: 479.2 bits (1232), Expect = 2.5e-131
Identity = 244/287 (85.02%), Postives = 261/287 (90.94%), Query Frame = 0


Query: 1   MRRLPLSHLSSLFRSSSLSHGGSSFSPSRLSISPFPGSDAR--------SHRSDLTGSVQ 60
           MRRLP  HLSSLFRSSSLSH GSSFS SRLSISPF G+DAR        SH S+++GSVQ
Sbjct: 1   MRRLPFPHLSSLFRSSSLSH-GSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQ 60

Query: 61  LDKQVLGCLDLPQGDSVNVGREIVGSAWKALGAQGPCWGLARSSGSVSVPHSTSCRCYVH 120
           LD+Q  GC++LP+GDSVNVGREIVG AWKALGAQGPCWGLARSS +VSVP+S+S RCYVH
Sbjct: 61  LDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVH 120

Query: 121 YGSGPNADTGRNLKSMSFVRGILEEDGTDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180
           Y   PNADTGRN KSM+FVRGILEEDG DFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI
Sbjct: 121 YDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180

Query: 181 TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTY 240
           TVTDNKGNTKLKAS+GRLEELKGGPKLSRYAAEA AEYVGRES+KLGLKSVVMRVKGFTY
Sbjct: 181 TVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTY 240

Query: 241 FKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 280
           FKKK+QAI+SWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 FKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of Tan0018849 vs. NCBI nr
Match: KAG7030891.1 (putative ribosomal protein S11, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 479.2 bits (1232), Expect = 2.5e-131
Identity = 244/287 (85.02%), Postives = 260/287 (90.59%), Query Frame = 0


Query: 1   MRRLPLSHLSSLFRSSSLSHGGSSFSPSRLSISPFPGSDAR--------SHRSDLTGSVQ 60
           MRRLP  HLSSLFRSSSLSH GSSFS  RLSISPF G+DAR        SH S+++GSVQ
Sbjct: 1   MRRLPFPHLSSLFRSSSLSH-GSSFSSCRLSISPFFGTDARSPMSSLHFSHGSEISGSVQ 60

Query: 61  LDKQVLGCLDLPQGDSVNVGREIVGSAWKALGAQGPCWGLARSSGSVSVPHSTSCRCYVH 120
           LD+Q  GC+DLP+GDSVNVGREIVG AWKALGAQGPCWGLARSS +VSVP+S+S RCYVH
Sbjct: 61  LDRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVH 120

Query: 121 YGSGPNADTGRNLKSMSFVRGILEEDGTDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180
           Y   PNADTGRN KSM+FVRGILEEDG DFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI
Sbjct: 121 YDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180

Query: 181 TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTY 240
           TVTDNKGNTKLKAS+GRLEELKGGPKLSRYAAEA AEYVGRES+KLGLKSVVMRVKGFTY
Sbjct: 181 TVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTY 240

Query: 241 FKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 280
           FKKK+QAI+SWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 FKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of Tan0018849 vs. NCBI nr
Match: XP_023526167.1 (probable ribosomal protein S11, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 469.2 bits (1206), Expect = 2.5e-128
Identity = 241/287 (83.97%), Postives = 258/287 (89.90%), Query Frame = 0


Query: 1   MRRLPLSHLSSLFRSSSLSHGGSSFSPSRLSISPFPGSDAR--------SHRSDLTGSVQ 60
           MRRLPL HLSSLFRSSSLSH GSSFS SRLSISPF G+DAR        S  S+++GSVQ
Sbjct: 1   MRRLPLPHLSSLFRSSSLSH-GSSFSSSRLSISPFFGTDARSPMSSLHFSRGSEISGSVQ 60

Query: 61  LDKQVLGCLDLPQGDSVNVGREIVGSAWKALGAQGPCWGLARSSGSVSVPHSTSCRCYVH 120
           +D+Q  GC+DLP+GDSVNVGREIVG A K LGAQGPCWGLARSS +VSVP+S+S RCYVH
Sbjct: 61  IDRQDSGCVDLPRGDSVNVGREIVGRAGKGLGAQGPCWGLARSSENVSVPYSSSSRCYVH 120

Query: 121 YGSGPNADTGRNLKSMSFVRGILEEDGTDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180
           Y   PNADTGRN KSM+FVRGILEED  DFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI
Sbjct: 121 YDGRPNADTGRNFKSMNFVRGILEEDRMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180

Query: 181 TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTY 240
           TVTDNKGNTKLKAS+GRLEELKGGPKLSRYAAEA AEYVGRES+KLGLKSVVMRVKGFTY
Sbjct: 181 TVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTY 240

Query: 241 FKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 280
           FKKK+QAI+SWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 FKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of Tan0018849 vs. NCBI nr
Match: XP_022141322.1 (probable ribosomal protein S11, mitochondrial [Momordica charantia])

HSP 1 Score: 445.7 bits (1145), Expect = 3.0e-121
Identity = 239/287 (83.28%), Postives = 248/287 (86.41%), Query Frame = 0


Query: 1   MRRLPLSHLSSLFRSSSLSHGGSSFSPSRLSISPFPGSDARS-------HRSDLTGSVQL 60
           MRRL LSHLSSLFRSSSLSHG SS SP R SIS F GSDARS       HRSDLTGSVQL
Sbjct: 1   MRRLQLSHLSSLFRSSSLSHGSSS-SPFRPSISSFTGSDARSPMASLHPHRSDLTGSVQL 60

Query: 61  DKQVLGCLDLPQGDSVNVGREI-VGSAWKALGAQGPCWGLARSSGSVSVPHSTSCRCYVH 120
           D QV GCLDLPQGDS++VGR+I VG AWKALG  G      RS  +VSVP++ + +CYVH
Sbjct: 61  DNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG------RSRENVSVPYAVNSKCYVH 120

Query: 121 YGSGPNADTGRNLKSMSFVRGILEEDGTDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180
           Y S  NADTGRN KSM+FVRGILEEDG DFM  S FPRPPNME NADIVHVKLMRNNTFI
Sbjct: 121 YDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFI 180

Query: 181 TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTY 240
           TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTY
Sbjct: 181 TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTY 240

Query: 241 FKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 280
           FKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 FKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 280

[Close]

BLAST of Tan0018849 vs. ExPASy TrEMBL
Match: A0A6J1KGF8 (probable ribosomal protein S11, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111493991 PE=3 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.3e-133
Identity = 249/287 (86.76%), Postives = 262/287 (91.29%), Query Frame = 0


Query: 1   MRRLPLSHLSSLFRSSSLSHGGSSFSPSRLSISPFPGSDAR--------SHRSDLTGSVQ 60
           MRRLPL HLSSLFRSSSLSH GSSFS SR+SISPF G+D R        SH SDL+GSVQ
Sbjct: 1   MRRLPLPHLSSLFRSSSLSH-GSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQ 60

Query: 61  LDKQVLGCLDLPQGDSVNVGREIVGSAWKALGAQGPCWGLARSSGSVSVPHSTSCRCYVH 120
           LD+Q  GC+DLP+GDSVNVGREIVG AWKALGAQGPCWGLARSS +VSVP+S+S RCYVH
Sbjct: 61  LDRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVH 120

Query: 121 YGSGPNADTGRNLKSMSFVRGILEEDGTDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180
           Y   PNADTGRN KSM+FVRGILEEDG +FMGSSQFPRPPNMEHNADIVHVKLMRNNTFI
Sbjct: 121 YDGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180

Query: 181 TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTY 240
           TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEA AEYVGRESRKLGLKSVVMRVKGFTY
Sbjct: 181 TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTY 240

Query: 241 FKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 280
           FKKK+QAI+SWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 FKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of Tan0018849 vs. ExPASy TrEMBL
Match: A0A6J1FTT5 (probable ribosomal protein S11, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111447246 PE=3 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.2e-131
Identity = 244/287 (85.02%), Postives = 261/287 (90.94%), Query Frame = 0


Query: 1   MRRLPLSHLSSLFRSSSLSHGGSSFSPSRLSISPFPGSDAR--------SHRSDLTGSVQ 60
           MRRLP  HLSSLFRSSSLSH GSSFS SRLSISPF G+DAR        SH S+++GSVQ
Sbjct: 1   MRRLPFPHLSSLFRSSSLSH-GSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQ 60

Query: 61  LDKQVLGCLDLPQGDSVNVGREIVGSAWKALGAQGPCWGLARSSGSVSVPHSTSCRCYVH 120
           LD+Q  GC++LP+GDSVNVGREIVG AWKALGAQGPCWGLARSS +VSVP+S+S RCYVH
Sbjct: 61  LDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVH 120

Query: 121 YGSGPNADTGRNLKSMSFVRGILEEDGTDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180
           Y   PNADTGRN KSM+FVRGILEEDG DFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI
Sbjct: 121 YDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180

Query: 181 TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTY 240
           TVTDNKGNTKLKAS+GRLEELKGGPKLSRYAAEA AEYVGRES+KLGLKSVVMRVKGFTY
Sbjct: 181 TVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTY 240

Query: 241 FKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 280
           FKKK+QAI+SWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 FKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of Tan0018849 vs. ExPASy TrEMBL
Match: A0A6J1CJJ5 (probable ribosomal protein S11, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111011744 PE=3 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.5e-121
Identity = 239/287 (83.28%), Postives = 248/287 (86.41%), Query Frame = 0


Query: 1   MRRLPLSHLSSLFRSSSLSHGGSSFSPSRLSISPFPGSDARS-------HRSDLTGSVQL 60
           MRRL LSHLSSLFRSSSLSHG SS SP R SIS F GSDARS       HRSDLTGSVQL
Sbjct: 1   MRRLQLSHLSSLFRSSSLSHGSSS-SPFRPSISSFTGSDARSPMASLHPHRSDLTGSVQL 60

Query: 61  DKQVLGCLDLPQGDSVNVGREI-VGSAWKALGAQGPCWGLARSSGSVSVPHSTSCRCYVH 120
           D QV GCLDLPQGDS++VGR+I VG AWKALG  G      RS  +VSVP++ + +CYVH
Sbjct: 61  DNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG------RSRENVSVPYAVNSKCYVH 120

Query: 121 YGSGPNADTGRNLKSMSFVRGILEEDGTDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180
           Y S  NADTGRN KSM+FVRGILEEDG DFM  S FPRPPNME NADIVHVKLMRNNTFI
Sbjct: 121 YDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFI 180

Query: 181 TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTY 240
           TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTY
Sbjct: 181 TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTY 240

Query: 241 FKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 280
           FKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 FKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 280

[Close]

BLAST of Tan0018849 vs. ExPASy TrEMBL
Match: A0A0A0KVQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G107470 PE=3 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 9.5e-105
Identity = 211/285 (74.04%), Postives = 233/285 (81.75%), Query Frame = 0


Query: 1   MRRLPLSHLSSLFRSSSLSHGGSSFSPSRLSISPFPGSDARS-----HRSDLTGSVQLDK 60
           M +L LSHLSSLFRSSSLS    SFSPSRLSISPF GSDA S     HRSDLTGS+Q   
Sbjct: 1   MPKLSLSHLSSLFRSSSLS-PAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHN 60

Query: 61  QVLGCLDLPQGDSVNVGREIVGSAWKALGAQGPCWGLARSSGSVSVPHSTSCRCYVHYGS 120
           Q  GCL     DS NVGREIVG  WK++G QGP  GLAR S  VS+P+S S RCY  Y +
Sbjct: 61  QFSGCL----RDSANVGREIVGRGWKSMGVQGPSSGLARPSEGVSIPYSISSRCYGEYDN 120

Query: 121 GPN-ADTGRNLKSMSFVRGILEEDGTDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITV 180
            PN  DTGRNLK M+FVRGILEE+   F G+ QF RP NMEHNADIVH+KLMRNN+F+TV
Sbjct: 121 RPNPPDTGRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTV 180

Query: 181 TDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFK 240
           TDNKGNTKLKASAGRLE   GG KLSRY+A++IAEYVGRESRKLGLKSVVMRVKGFT+FK
Sbjct: 181 TDNKGNTKLKASAGRLE---GGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFK 240

Query: 241 KKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 280
           KK+QAI+SWRDGFTDSR+DQNPIVY+EDTTRRAHNGCRLPK+RRV
Sbjct: 241 KKKQAILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 277

[Close]

BLAST of Tan0018849 vs. ExPASy TrEMBL
Match: A0A5A7TPI6 (Putative ribosomal protein S11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00350 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.4e-100
Identity = 207/286 (72.38%), Postives = 227/286 (79.37%), Query Frame = 0


Query: 1   MRRLPLSHLSSLFRSSSLSHGGSSFSPSRLSISPFPGSDARSH-----RSDLTGSVQLDK 60
           M +L LSHLS LFRSSSLS    SFSPSRLSISPF GSDA S       S LTGS+Q   
Sbjct: 1   MPKLSLSHLSPLFRSSSLSR-SPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHN 60

Query: 61  QVLGCLDLPQGDSVNVGREIVGSAWKALGAQGPCWGLARSSGSVSVPHSTSCRCYVHYGS 120
              G          +VGREIVG  WKA+G QGP WGLARS+ SVSVP+S S RCY  Y +
Sbjct: 61  HFSG----------SVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDN 120

Query: 121 GPN-ADTGRNLKSMSFVRGILEEDGTDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITV 180
            PN  DTGRNLK+++FVRGILEED   F    Q+ RP NMEHNADIVH+KLMRNN F+TV
Sbjct: 121 RPNPPDTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTV 180

Query: 181 TDNKGNTKLKASAGRLEELK-GGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYF 240
           TDNKGNTKLKASAGRLEELK GG KLSRY+ ++IAEYVGRESRKLGLKSVVMRVKGFT+F
Sbjct: 181 TDNKGNTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFF 240

Query: 241 KKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 280
           KKK+QAI+SWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPK+RRV
Sbjct: 241 KKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 275

[Close]

BLAST of Tan0018849 vs. TAIR 10
Match: AT1G31817.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 201.8 bits (512), Expect = 7.1e-52
Identity = 101/192 (52.60%), Postives = 141/192 (73.44%), Query Frame = 0


Query: 91  GLARSSGS-VSVPHSTSCRCYVHYGS--GPNADTGRNLKSMSFVRGILEEDGTDFMGSSQ 150
           GL  + GS  S P  +S   +    S    N+ +G     + FVR ++E++G    G   
Sbjct: 123 GLPNTGGSGFSAPSLSSYENFTQSSSLLKENSRSGGKSSDLDFVREVIEDEGRRTAGIFS 182

Query: 151 FPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAI 210
             + PN+E NADI+H+K++RNNTF+TVTD+KGN K KA++G L +LKGG K++ Y A+A 
Sbjct: 183 HFQRPNLETNADIIHIKMLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGRKMTNYTADAT 242

Query: 211 AEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRA 270
           AE +GR ++ +GLKSVV++V GFT+F KK++AI+++RDGFT+SRSDQNPIVYIEDTTR+A
Sbjct: 243 AENIGRRAKAMGLKSVVVKVNGFTHFGKKKKAIIAFRDGFTNSRSDQNPIVYIEDTTRKA 302

Query: 271 HNGCRLPKQRRV 280
           HNGCRLP++RRV
Sbjct: 303 HNGCRLPRKRRV 314

[Close]

BLAST of Tan0018849 vs. TAIR 10
Match: ATCG00750.1 (ribosomal protein S11 )

HSP 1 Score: 47.0 bits (110), Expect = 2.9e-05
Identity = 36/120 (30.00%), Postives = 57/120 (47.50%), Query Frame = 0


Query: 160 IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLG 219
           ++HV+   NNT +TVTD +G     +SAG     +G  + + +AA+  A    R     G
Sbjct: 29  VIHVQASFNNTIVTVTDVRGRVISWSSAGTC-GFRGTRRGTPFAAQTAAGNAIRAVVDQG 88

Query: 220 LKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 279
           ++   +R+KG    +      +  R G          + ++ D T   HNGCR PK+RRV
Sbjct: 89  MQRAEVRIKGPGLGRDAALRAIR-RSGIL--------LSFVRDVTPMPHNGCRPPKKRRV 138

The following BLAST results are available for this feature:

BLAST of Tan0018849 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZT8	1.0e-50	52.60	Probable ribosomal protein S11, mitochondrial OS=Arabidopsis thaliana OX=3702 GN...	[more]
P46746	1.6e-11	35.71	Ribosomal protein S11, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS11 ...	[more]
A8ETK4	1.7e-10	35.83	30S ribosomal protein S11 OS=Arcobacter butzleri (strain RM4018) OX=367737 GN=rp...	[more]
A5D5E6	1.7e-10	39.17	30S ribosomal protein S11 OS=Pelotomaculum thermopropionicum (strain DSM 13744 /...	[more]
Q0BYD7	5.0e-10	37.50	30S ribosomal protein S11 OS=Hyphomonas neptunium (strain ATCC 15444) OX=228405 ...	[more]

BLAST of Tan0018849 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022999735.1	2.6e-133	86.76	probable ribosomal protein S11, mitochondrial [Cucurbita maxima]	[more]
XP_022942058.1	2.5e-131	85.02	probable ribosomal protein S11, mitochondrial [Cucurbita moschata]	[more]
KAG7030891.1	2.5e-131	85.02	putative ribosomal protein S11, mitochondrial [Cucurbita argyrosperma subsp. arg...	[more]
XP_023526167.1	2.5e-128	83.97	probable ribosomal protein S11, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022141322.1	3.0e-121	83.28	probable ribosomal protein S11, mitochondrial [Momordica charantia]	[more]

BLAST of Tan0018849 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGF8	1.3e-133	86.76	probable ribosomal protein S11, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1FTT5	1.2e-131	85.02	probable ribosomal protein S11, mitochondrial OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1CJJ5	1.5e-121	83.28	probable ribosomal protein S11, mitochondrial OS=Momordica charantia OX=3673 GN=...	[more]
A0A0A0KVQ8	9.5e-105	74.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G107470 PE=3 SV=1	[more]
A0A5A7TPI6	1.4e-100	72.38	Putative ribosomal protein S11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of Tan0018849 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31817.1	7.1e-52	52.60	Ribosomal L18p/L5e family protein	[more]
ATCG00750.1	2.9e-05	30.00	ribosomal protein S11	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001971	Ribosomal protein S11	PFAM	PF00411	Ribosomal_S11	coord: 160..278 e-value: 2.9E-13 score: 50.2
IPR001971	Ribosomal protein S11	PANTHER	PTHR11759	40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11	coord: 111..279
IPR001971	Ribosomal protein S11	HAMAP	MF_01310	Ribosomal_S11	coord: 123..279 score: 15.931524
IPR036967	Ribosomal protein S11 superfamily	GENE3D	3.30.420.80	Ribosomal protein S11	coord: 150..279 e-value: 7.2E-34 score: 118.8
None	No IPR available	PANTHER	PTHR11759:SF34	RIBOSOMAL PROTEIN S11, MITOCHONDRIAL-RELATED	coord: 111..279
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 158..279

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0018849.1	Tan0018849.1	mRNA
Tan0018849.2	Tan0018849.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0048027	mRNA 5'-UTR binding
molecular_function	GO:0070181	small ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome