Tan0018816 (gene) Snake gourd v1

Overview


Name	Tan0018816
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Auxin efflux carrier component
Location	LG08: 15968790 .. 15970194 (-)
RNA-Seq Expression	Tan0018816
Synteny	Tan0018816

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAACATTGATACAAAGATGTGTATTAACGTTATCAGACACAGTCCAAACTCTCTCCATGTTTAGTTTGGGAATTTTCATGGCAGCACAACCAAACATCATTGCTTGTTCGATGTCGGAGGCTGCCTTCGCCATGGTTGTTCGATTCCTCGTTACCCCCATGCTCGTCGCTGTCATTTCCAAACTCGTGAGCCTCCATGGGATTGCATTGCATACTGCTATCATTCAGGTTCTTCTCAACTCTTTTATTTTACTCTCAAGGATAGTAGTCTATGAAATATTTTGCGCTCCAAATACAAACTATTATAATCTAGAATAAATAACTTTGCATTCTAAATATAGATTATATAACTTCACAAACTATTATAACTCATTCAACACTCCAAAGGATTATTTTCATCATTATTGTTCATTGCATTTAACACAAGTTTTTGTGGTGTTACATAATTTTCTTTAACTCTTTGTTAATAATCTTTGAATTTACAACCTCGATTACTAATATCTAACCATTTAATTTTTGGTTTTTGGTTTTTGAAAATTATATATATTTTTTTAATAATTTATCTTCATTTCTTTATAATGATATCCATATTTCTTGAGGTGTCATTTAAGTTTCTAACTAAATTTCAAAAACAAAAACAAGTTTTTGAAAACTATTTTTTTTTTAATTTTCAAAACTTAGTTTGGTTTTTGAAAACATAAGTACAAAATAGATAAGAAAATCAAGACACCCATGGGTAAGTAATATTTTTTAAAATAAAAAATTAAAAACGAAATGATTATCAAACAGATTTATGCCCATTGTAACAAGTAAACCGTTGTTTTAATAGTTTAGATGTATTAAAGTTGTCATTAAATTCGAAAAAATGGTATCCGCATTTTGTTAAACAAAAATGAAAAAAAAAAATGTTGAGGATGACAACCGAACTCAATATTTATAAAAGTTAAGGTATGAAGATAAAATGTTTGAAGTATAATATGGACACAAAAAAAAGTATGGTACGTAGGTTTTAAAATATAATAGTTAAAAATTTAGTATAAGTAGAGTAAAAAAATATTTTTATTTTTTTTAAACTACAATAAGCATCAAGATTTAAATCACACCCCGTAATTGTTAACACATTTAATAGGCTAATTAAACTATACTTTTTTTTTTTTTTGACAATTACATCGAGATTAAACACACCTTATATTGGTAATTATTGATTTATTTAATTAATGACACTATTGCATAAAATAAAAATATAAAGTTTAAAGTACAATTATAATGCTTTATTTTCACTCTAATTTTTAGTTATCTTTTTTTTTTTTTAAATTTTTAGGCTGCTTTTCCTCAAGGAGTTGTTTCATTCGTATTGGCTAAGGAATACAATGTTCACCCAAACGTACTTAGTACTTCGTAA

mRNA sequence

ATGCCAACATTGATACAAAGATGTGTATTAACGTTATCAGACACAGTCCAAACTCTCTCCATGTTTAGTTTGGGAATTTTCATGGCAGCACAACCAAACATCATTGCTTGTTCGATGTCGGAGGCTGCCTTCGCCATGGTTGTTCGATTCCTCGTTACCCCCATGCTCGTCGCTGTCATTTCCAAACTCGTGAGCCTCCATGGGATTGCATTGCATACTGCTATCATTCAGGCTGCTTTTCCTCAAGGAGTTGTTTCATTCGTATTGGCTAAGGAATACAATGTTCACCCAAACGTACTTAGTACTTCGTAA

Coding sequence (CDS)

ATGCCAACATTGATACAAAGATGTGTATTAACGTTATCAGACACAGTCCAAACTCTCTCCATGTTTAGTTTGGGAATTTTCATGGCAGCACAACCAAACATCATTGCTTGTTCGATGTCGGAGGCTGCCTTCGCCATGGTTGTTCGATTCCTCGTTACCCCCATGCTCGTCGCTGTCATTTCCAAACTCGTGAGCCTCCATGGGATTGCATTGCATACTGCTATCATTCAGGCTGCTTTTCCTCAAGGAGTTGTTTCATTCGTATTGGCTAAGGAATACAATGTTCACCCAAACGTACTTAGTACTTCGTAA

Protein sequence

MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVISKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS

Homology

[Close]

BLAST of Tan0018816 vs. ExPASy Swiss-Prot
Match: P0C0X5 (Probable auxin efflux carrier component 1b OS=Oryza sativa subsp. japonica OX=39947 GN=PIN1B PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-24
Identity = 61/103 (59.22%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MP +I R +  LSD    ++MFSLG+FMA QP IIAC  S A++AM VRFLV P ++A  
Sbjct: 431 MPAIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGNSLASYAMAVRFLVGPAVMAAA 490

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           S  V L G+ LH AI+QAA PQG+V FV AKEYNVHPN+LST+
Sbjct: 491 SIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPNILSTA 533

[Close]

BLAST of Tan0018816 vs. ExPASy Swiss-Prot
Match: Q0IQA5 (Probable auxin efflux carrier component 1d OS=Oryza sativa subsp. japonica OX=39947 GN=PIN1D PE=2 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-24
Identity = 61/103 (59.22%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MP +I R +  LSD    ++MFSLG+FMA QP IIAC  S A++AM VRFLV P ++A  
Sbjct: 435 MPAIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGNSLASYAMAVRFLVGPAVMAAA 494

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           S  V L G+ LH AI+QAA PQG+V FV AKEYNVHPN+LST+
Sbjct: 495 SIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPNILSTA 537

[Close]

BLAST of Tan0018816 vs. ExPASy Swiss-Prot
Match: Q9LU77 (Auxin efflux carrier component 2 OS=Arabidopsis thaliana OX=3702 GN=PIN2 PE=1 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 9.4e-23
Identity = 57/103 (55.34%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MPT++   +  LSD    ++MFSLG+FMA QP IIAC  S A FAM VRFL  P ++A  
Sbjct: 524 MPTIMSGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAGFAMAVRFLTGPAVIAAT 583

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           S  + + G  LH AI+QAA PQG+V FV AKEYNVHP++LST+
Sbjct: 584 SIAIGIRGDLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTA 626

[Close]

BLAST of Tan0018816 vs. ExPASy Swiss-Prot
Match: Q8RWZ6 (Auxin efflux carrier component 4 OS=Arabidopsis thaliana OX=3702 GN=PIN4 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 57/102 (55.88%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MP ++Q+ +  LSD    ++MFSLG+FMA QP IIAC  S A FAM VRF+  P ++AV 
Sbjct: 493 MPKILQQSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFAMAVRFITGPAIMAVA 552

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLST 103
              + LHG  L  AI+QAA PQG+V FV AKEYNVHP +LST
Sbjct: 553 GIAIGLHGDLLRIAIVQAALPQGIVPFVFAKEYNVHPTILST 594

[Close]

BLAST of Tan0018816 vs. ExPASy Swiss-Prot
Match: Q9C6B8 (Auxin efflux carrier component 1 OS=Arabidopsis thaliana OX=3702 GN=PIN1 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 58/103 (56.31%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MP LI + +  LSD    ++MFSLG+FMA  P IIAC    AAFA  +RF+V P ++ V 
Sbjct: 499 MPALIAKSISILSDAGLGMAMFSLGLFMALNPRIIACGNRRAAFAAAMRFVVGPAVMLVA 558

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           S  V L G+ LH AIIQAA PQG+V FV AKEYNVHP++LST+
Sbjct: 559 SYAVGLRGVLLHVAIIQAALPQGIVPFVFAKEYNVHPDILSTA 601

[Close]

BLAST of Tan0018816 vs. NCBI nr
Match: XP_038889292.1 (auxin efflux carrier component 2-like [Benincasa hispida])

HSP 1 Score: 167.2 bits (422), Expect = 7.6e-38
Identity = 89/103 (86.41%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MPTL+QRCVL LSDT Q LSMFSLGIFMAAQPNII+CSMSEAA AM+VRFL++P+L+A I
Sbjct: 296 MPTLLQRCVLMLSDTGQALSMFSLGIFMAAQPNIISCSMSEAASAMLVRFLLSPILIAAI 355

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           +KLV+LHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS
Sbjct: 356 TKLVNLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 398

[Close]

BLAST of Tan0018816 vs. NCBI nr
Match: KAE8651711.1 (hypothetical protein Csa_006143 [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 8.5e-37
Identity = 87/103 (84.47%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MPT++QRCVL LSDT Q LSMF+LGIFMA QPNIIACS+SEAA AM+VRFLV+PML+A I
Sbjct: 294 MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 353

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           SKL++L GIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS
Sbjct: 354 SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 396

[Close]

BLAST of Tan0018816 vs. NCBI nr
Match: XP_011648997.2 (probable auxin efflux carrier component 1d [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 8.5e-37
Identity = 87/103 (84.47%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MPT++QRCVL LSDT Q LSMF+LGIFMA QPNIIACS+SEAA AM+VRFLV+PML+A I
Sbjct: 294 MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 353

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           SKL++L GIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS
Sbjct: 354 SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 396

[Close]

BLAST of Tan0018816 vs. NCBI nr
Match: XP_038889293.1 (probable auxin efflux carrier component 1b [Benincasa hispida])

HSP 1 Score: 154.5 bits (389), Expect = 5.1e-34
Identity = 81/103 (78.64%), Postives = 93/103 (90.29%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           +PTL+QRCVL  SDT Q L++FSLGIFMAAQPNIIACS+ E A AM+VRFLV+PMLVA I
Sbjct: 274 LPTLLQRCVLMFSDTGQALALFSLGIFMAAQPNIIACSILEIASAMLVRFLVSPMLVAAI 333

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           SKLV LHGIAL+TAI+QAAFP G+VSFVLAKEYNVHPN++STS
Sbjct: 334 SKLVDLHGIALYTAILQAAFPPGIVSFVLAKEYNVHPNIISTS 376

[Close]

BLAST of Tan0018816 vs. NCBI nr
Match: XP_022149912.1 (probable auxin efflux carrier component 1b [Momordica charantia])

HSP 1 Score: 151.4 bits (381), Expect = 4.3e-33
Identity = 81/103 (78.64%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MPTL+ +C+  LSDT   LSMFSLG FMA QPNIIACSMS+AA AM  RFL++PMLVA I
Sbjct: 39  MPTLMHKCISMLSDTGLALSMFSLGTFMAVQPNIIACSMSQAATAMAARFLISPMLVAAI 98

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           S LV LHGI LHTAIIQAAFPQGV+SFVLAKEYNVHPNVLSTS
Sbjct: 99  SMLVGLHGIVLHTAIIQAAFPQGVLSFVLAKEYNVHPNVLSTS 141

[Close]

BLAST of Tan0018816 vs. ExPASy TrEMBL
Match: A0A0A0LMR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G074270 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.1e-37
Identity = 87/103 (84.47%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MPT++QRCVL LSDT Q LSMF+LGIFMA QPNIIACS+SEAA AM+VRFLV+PML+A I
Sbjct: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           SKL++L GIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS
Sbjct: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 103

[Close]

BLAST of Tan0018816 vs. ExPASy TrEMBL
Match: A0A6J1D9A5 (probable auxin efflux carrier component 1b OS=Momordica charantia OX=3673 GN=LOC111018214 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.1e-33
Identity = 81/103 (78.64%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MPTL+ +C+  LSDT   LSMFSLG FMA QPNIIACSMS+AA AM  RFL++PMLVA I
Sbjct: 39  MPTLMHKCISMLSDTGLALSMFSLGTFMAVQPNIIACSMSQAATAMAARFLISPMLVAAI 98

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           S LV LHGI LHTAIIQAAFPQGV+SFVLAKEYNVHPNVLSTS
Sbjct: 99  SMLVGLHGIVLHTAIIQAAFPQGVLSFVLAKEYNVHPNVLSTS 141

[Close]

BLAST of Tan0018816 vs. ExPASy TrEMBL
Match: A0A6J1KEF2 (Auxin efflux carrier component OS=Cucurbita maxima OX=3661 GN=LOC111492489 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 5.2e-32
Identity = 78/103 (75.73%), Postives = 89/103 (86.41%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MPT++QRCVL  +DT Q L+MFSLGIFMAAQP II CSMS+ A AM+VRFL++PML A  
Sbjct: 300 MPTVLQRCVLMFADTGQALAMFSLGIFMAAQPTIIDCSMSQVAIAMLVRFLISPMLSAAT 359

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           SKLV L GI LHTAIIQAAFPQGVVSFVLAK+YNV+PNV+STS
Sbjct: 360 SKLVGLRGIILHTAIIQAAFPQGVVSFVLAKQYNVYPNVMSTS 402

[Close]

BLAST of Tan0018816 vs. ExPASy TrEMBL
Match: A0A6J1EV74 (Auxin efflux carrier component OS=Cucurbita moschata OX=3662 GN=LOC111436245 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 5.2e-32
Identity = 78/103 (75.73%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MPT++QRCVL  +DT Q L+MFSLGIFMAAQP II CSMSE A AM+VRFL++PML A  
Sbjct: 300 MPTVLQRCVLMFADTGQALAMFSLGIFMAAQPTIIDCSMSEVAIAMLVRFLISPMLSAAT 359

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           SKLV L GI LHTAIIQAAFPQGVVSFV AK+YNV+PNV+STS
Sbjct: 360 SKLVGLRGIVLHTAIIQAAFPQGVVSFVFAKQYNVYPNVMSTS 402

[Close]

BLAST of Tan0018816 vs. ExPASy TrEMBL
Match: A0A5A7U1Y8 (Putative auxin efflux carrier component 1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00300 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 9.8e-31
Identity = 75/83 (90.36%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 21  MFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVISKLVSLHGIALHTAIIQAAF 80
           MF+LGIFMAAQPNIIACSMSEAA AM+VRFLV+PML+A ISKL++LHGIALHTAIIQAAF
Sbjct: 1   MFTLGIFMAAQPNIIACSMSEAASAMLVRFLVSPMLIAAISKLINLHGIALHTAIIQAAF 60

Query: 81  PQGVVSFVLAKEYNVHPNVLSTS 104
           PQGVVSFVLAKEYNVHPNVLSTS
Sbjct: 61  PQGVVSFVLAKEYNVHPNVLSTS 83

[Close]

BLAST of Tan0018816 vs. TAIR 10
Match: AT5G57090.1 (Auxin efflux carrier family protein )

HSP 1 Score: 107.5 bits (267), Expect = 6.7e-24
Identity = 57/103 (55.34%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MPT++   +  LSD    ++MFSLG+FMA QP IIAC  S A FAM VRFL  P ++A  
Sbjct: 524 MPTIMSGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAGFAMAVRFLTGPAVIAAT 583

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           S  + + G  LH AI+QAA PQG+V FV AKEYNVHP++LST+
Sbjct: 584 SIAIGIRGDLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTA 626

[Close]

BLAST of Tan0018816 vs. TAIR 10
Match: AT1G73590.1 (Auxin efflux carrier family protein )

HSP 1 Score: 107.1 bits (266), Expect = 8.8e-24
Identity = 58/103 (56.31%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MP LI + +  LSD    ++MFSLG+FMA  P IIAC    AAFA  +RF+V P ++ V 
Sbjct: 499 MPALIAKSISILSDAGLGMAMFSLGLFMALNPRIIACGNRRAAFAAAMRFVVGPAVMLVA 558

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           S  V L G+ LH AIIQAA PQG+V FV AKEYNVHP++LST+
Sbjct: 559 SYAVGLRGVLLHVAIIQAALPQGIVPFVFAKEYNVHPDILSTA 601

[Close]

BLAST of Tan0018816 vs. TAIR 10
Match: AT2G01420.1 (Auxin efflux carrier family protein )

HSP 1 Score: 107.1 bits (266), Expect = 8.8e-24
Identity = 57/102 (55.88%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MP ++Q+ +  LSD    ++MFSLG+FMA QP IIAC  S A FAM VRF+  P ++AV 
Sbjct: 489 MPKILQQSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFAMAVRFITGPAIMAVA 548

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLST 103
              + LHG  L  AI+QAA PQG+V FV AKEYNVHP +LST
Sbjct: 549 GIAIGLHGDLLRIAIVQAALPQGIVPFVFAKEYNVHPTILST 590

[Close]

BLAST of Tan0018816 vs. TAIR 10
Match: AT2G01420.2 (Auxin efflux carrier family protein )

HSP 1 Score: 107.1 bits (266), Expect = 8.8e-24
Identity = 57/102 (55.88%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MP ++Q+ +  LSD    ++MFSLG+FMA QP IIAC  S A FAM VRF+  P ++AV 
Sbjct: 493 MPKILQQSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFAMAVRFITGPAIMAVA 552

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLST 103
              + LHG  L  AI+QAA PQG+V FV AKEYNVHP +LST
Sbjct: 553 GIAIGLHGDLLRIAIVQAALPQGIVPFVFAKEYNVHPTILST 594

[Close]

BLAST of Tan0018816 vs. TAIR 10
Match: AT1G70940.1 (Auxin efflux carrier family protein )

HSP 1 Score: 104.4 bits (259), Expect = 5.7e-23
Identity = 57/102 (55.88%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 1   MPTLIQRCVLTLSDTVQTLSMFSLGIFMAAQPNIIACSMSEAAFAMVVRFLVTPMLVAVI 60
           MP +IQ+ +  LSD    ++MFSLG+FMA QP +IAC  S A FAM VRFL  P ++AV 
Sbjct: 517 MPKIIQQSISILSDAGLGMAMFSLGLFMALQPKLIACGNSVATFAMAVRFLTGPAVMAVA 576

Query: 61  SKLVSLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLST 103
           +  + L G  L  AI+QAA PQG+V FV AKEYNVHP +LST
Sbjct: 577 AIAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILST 618

The following BLAST results are available for this feature:

BLAST of Tan0018816 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C0X5	1.3e-24	59.22	Probable auxin efflux carrier component 1b OS=Oryza sativa subsp. japonica OX=39...	[more]
Q0IQA5	1.3e-24	59.22	Probable auxin efflux carrier component 1d OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9LU77	9.4e-23	55.34	Auxin efflux carrier component 2 OS=Arabidopsis thaliana OX=3702 GN=PIN2 PE=1 SV...	[more]
Q8RWZ6	1.2e-22	55.88	Auxin efflux carrier component 4 OS=Arabidopsis thaliana OX=3702 GN=PIN4 PE=1 SV...	[more]
Q9C6B8	1.2e-22	56.31	Auxin efflux carrier component 1 OS=Arabidopsis thaliana OX=3702 GN=PIN1 PE=1 SV...	[more]

BLAST of Tan0018816 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889292.1	7.6e-38	86.41	auxin efflux carrier component 2-like [Benincasa hispida]	[more]
KAE8651711.1	8.5e-37	84.47	hypothetical protein Csa_006143 [Cucumis sativus]	[more]
XP_011648997.2	8.5e-37	84.47	probable auxin efflux carrier component 1d [Cucumis sativus]	[more]
XP_038889293.1	5.1e-34	78.64	probable auxin efflux carrier component 1b [Benincasa hispida]	[more]
XP_022149912.1	4.3e-33	78.64	probable auxin efflux carrier component 1b [Momordica charantia]	[more]

BLAST of Tan0018816 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMR0	4.1e-37	84.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G074270 PE=4 SV=1	[more]
A0A6J1D9A5	2.1e-33	78.64	probable auxin efflux carrier component 1b OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1KEF2	5.2e-32	75.73	Auxin efflux carrier component OS=Cucurbita maxima OX=3661 GN=LOC111492489 PE=3 ...	[more]
A0A6J1EV74	5.2e-32	75.73	Auxin efflux carrier component OS=Cucurbita moschata OX=3662 GN=LOC111436245 PE=...	[more]
A0A5A7U1Y8	9.8e-31	90.36	Putative auxin efflux carrier component 1b OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Tan0018816 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57090.1	6.7e-24	55.34	Auxin efflux carrier family protein	[more]
AT1G73590.1	8.8e-24	56.31	Auxin efflux carrier family protein	[more]
AT2G01420.1	8.8e-24	55.88	Auxin efflux carrier family protein	[more]
AT2G01420.2	8.8e-24	55.88	Auxin efflux carrier family protein	[more]
AT1G70940.1	5.7e-23	55.88	Auxin efflux carrier family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004776	Membrane transport protein	PFAM	PF03547	Mem_trans	coord: 1..102 e-value: 2.4E-31 score: 108.5
IPR033526	Auxin efflux carrier component 2	PANTHER	PTHR31752:SF4	AUXIN EFFLUX CARRIER COMPONENT 2	coord: 1..103
None	No IPR available	PANTHER	PTHR31752	AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED	coord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0018816.1	Tan0018816.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010315	auxin efflux
biological_process	GO:0010252	auxin homeostasis
biological_process	GO:0009926	auxin polar transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0010329	auxin efflux transmembrane transporter activity