Tan0018726 (gene) Snake gourd v1

Overview


Name	Tan0018726
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Splicing factor U2af small subunit B-like
Location	LG08: 22423620 .. 22427149 (-)
RNA-Seq Expression	Tan0018726
Synteny	Tan0018726

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATTCTAGATAAAGAGACAAAAGAAGTTCATTCTTCTGGCTAAATTCAATTTTTCTCAAAAAGACGCCATAAAATAATTCCCTCTTTCTCTCACTCCCGTCCGCTGGAACCCTAACTTTTTGCGAATCGCTTCTCCAATTCTTTGGTGGGTTTGTTCATTTTGCTCTTCATTATCGTTGGAATTTGGAGTCTGCAATTTCTCTTTTGGCCTCTGAGGAGGACGGTAAGAATACGAACGAACATTCGTTGGTGTCGCTGAGATCTGAGAGGTGCAATGGCGGAGCATTTGGCTTCCATATTCGGGACGGAGAAGGACAGGGTTAACTGTCCATTCTACTTCAAGATCGGGGCCTGCCGGCACGGTGATAGGTGTTCGCGGTTGCATACGAAGCCTAGTATAAGCCCGACCCTCTTGCTTTCTAATATGTACCAGAGACCCGACATGATTACTCCTGGTGTCGACGCGCAGGGGAATCCGATTGACCCTCGCAAGATCCAGGACCATTTTGAGGTAGAACTTGTTTGCCGTTGTTTTTCCTCTCAATCTTTTAATATATTCGTGAGTGTATATTATTATTATTATTATTATTATTGAGGTTTGATATTTTGAGGCGAATCTTTGGTTTTTGGGGTTGGATTGTTATTATCTGATTGATTTGAGCATAATCTTGCTGTAATTTTAGAGGTAGTCTAATTTGGTTTATTTTTATGCGATCGTGTTATTTTGAATTTCATTTTGCGTATGGAAGAATTGTAGGTTGACTATTGATTTGTGCTCATTTCAGGAGTTCTATGAAGATTTATTCCAGGAACTGAGCAAGTATGGGGAGATTGAAAGTTTGAATGTTTGTGACAATCTCGCTGACCACATGGTAATACTGTCTTCTACTCCCGTTATTTGAAGGAAAACCAATTTTTCAATGGCTTTTCACCTTCGTTGTATTCTATTTCATTGTAGAATAGCTAATAAGTAGTCATCTGATGCGTTTGATTAGGTGGGTAACGTTTATGTTCAATTTCGAGAGGAGGAACAAGCCGCAAATGCTCTTCGGAATCTGAGCGGCAGATTCTATGCTGGTTAGTTGGAATTCATGTTCCCCCGCTTTCTCCTTTCCTTTTCAACCCCTTTTGTTGTTCTTGGTTTTTATTTCTTCATACTATCTATCAACTATCGTGTATACACTATTTGTATGCAGCTTTTAAATTAAAATTGGATGAAATTGGATGTGTAAAGATATGGAAAACAATTTTTTGCAGGACGTCCGATCATTGTTGACTTCTCTCCAGTTACCGATTTTAGAGAAGCTACTTGTAGGCAATATGAAGATAACATGTGTAATCGTGGTGGATATTGCAATTTCATGCATTTGAAGAGGATCAGCAGGTATATTTTCATCACCACCTCCCTCCTTTCCCTCTAAGAATGCATTATTCTTCTGTTGATCTTTTATTGCCACTTCTGCTATTCACACTTCATTTTATACCTATGATCTTTTCCTGTCTTTCAGAGAGCTGAGGCATGAGCTGTTTGCAATTTTCCGTCGAAGGCATAGTCACAGTAGGAGCAGAAGCCGCAGCCCCTATAGGCATCGGAGTTATGATGAACGCTCTTATGGTAGACATGGTCATAGTCGGAGGTATGATGAGAGAGATGCTTATCATGAAAGTCGGAGCAGGAGGCATAGGAGTACAAGCCCTAGTCATAGAAGAAGCAGAAGTCGTAGTCCACGAGGAAGTAAAAATCGAAGTCCAGTTAGAGAAGGGAGTGAAGAGAGGCGTGCTAAAATTGAGCAGTGGAACAGGGAAAGAGAACAACAAGCAAATGATAATAATGCCATTTCTGATGGCAAAATTAGCCATGAGAAAAGTTACAACGGTGATGTAAAGTATGCAAATCAGACCTGTGGTTATGAGGACCAGCAGCAGCGGCAGCCTCCCGAGCAAGGCTATGATTACTGATCTGTTTACCTAAACTTAGATTCAGGTATGGTTTCTTTCATATTCTACTATGGTTTCTGTTTGAGGTCTTGCATTCATTTATCAAAATCCCCGTATTTACACTTATCCCAATTTGTCAGTTGTCTGCTTCTTTAGCTCTTTCAGTAAGTAACATCAAGTTTTTTAAAGTGCATTCTCCAGTTACCTTTTTGAATTGTCGTCTGCCCTGTCCCTAACGGCCTTTTTTATTATTGTTTTTCAATTCTTCAGTAATCCTTAGTGTTTTGAGTTAGTACGTGTGCTTGGAGGGGTACATGTCCAGCGTAGGGGACTTTAAAAAATTAGAAAAAGGAAAGAAAGGGAGAATCATTTAATGAGATAAAACTCATGAAATGATGATGGGAAGTGCAAAAGAAACGATGCTTGAAATCAAGTCCTTTTCACCTATTTGATGTGAAACCAGTTGGTTCCTTTAGATGTGTGGAAAGTACAAGAATGTGTAGAAGAAAACCCCCTAGCTTACCAAGAGGTTCTCCAGTGTTGTATTTAAGCAAGAAACCCTCTTTTTCTGACGTCTTCTTATCCTATTCGAATTTCATTAGTATGCATCATCAATTGCATGTATGCATTCTTCTAATATCTTTTATTTTATAGCAAGTATACACTGATTTTACAGTCGGGGATTAAGACTGCTGCTCATGACGGACTTGTGAACAATCCAATTATCATATTACGGTTTCTTTTCCCTACAAACTTTTTACACGTTGATATTAAGGAAAATGTGATCTCATCATTATCTAAGTTTTGCAGGTTCAGGTTTCCTGCTTCTAAAAGGTTGTGAAACTAAGTTGTGACCATGAAATTTATGTACAGGTTAATATGGTCCACTGTGTAGGATGATTTGGCTTTACAGGATCTGCAGGTTATGGCTTTCAAAAAACTTGGGTAGAGGAAACGGCCAAGAAGTCGCACGCTCGCTTTGGTGTTTAATATCTATGTTGTGAGGGTTGCAGGTTAGGGATGTTGCTGAAAACATTTTGCATTTATTTCATATATTCTTGTTAGAAGAAAGAAAACCTAGGGTGTGGTGTGGTGTGGCATGCCTTCTGTCATATTTGAAAGGTAATTGTGTGTATCAAGGATTCTTTCTTAGGCTACAAAGCTGATAATTCACAAGGAAGCCAAGTTCATAAATGAAGCCAAATGCTAATTATTGTTAACATTTGCTCGACATAGCTCGAGTATAACCAATATCCAATCGGTGCTCCCTCGATTTGATCATGTGATGAATCGATAAAACTGATACCCTTTTGTATTTGTAATCTACGAGAAGATCTCTGGTACTATCTACGAAGAACAAAACCTGTTTAAACTTCTATAAAAATCGTTTCTAACACCAAATACTCGGTCTTCTCTTATGGATTGTTGCAAACCAATAGATTCTTTACATCTTTATTAACGAAATAAGAAAAGAAGAGAGAAATTACGTGTAAAACTATTATGAGGCAATTACTTTGCAGCCTTTTAGGGGCCGGCTGTGGGGGAGAACTGTGAGGTTTCTGGCTGGAATCATGTGATGAATCGATAAAAC

mRNA sequence

ACATTCTAGATAAAGAGACAAAAGAAGTTCATTCTTCTGGCTAAATTCAATTTTTCTCAAAAAGACGCCATAAAATAATTCCCTCTTTCTCTCACTCCCGTCCGCTGGAACCCTAACTTTTTGCGAATCGCTTCTCCAATTCTTTGGTGGGTTTGTTCATTTTGCTCTTCATTATCGTTGGAATTTGGAGTCTGCAATTTCTCTTTTGGCCTCTGAGGAGGACGGTAAGAATACGAACGAACATTCGTTGGTGTCGCTGAGATCTGAGAGGTGCAATGGCGGAGCATTTGGCTTCCATATTCGGGACGGAGAAGGACAGGGTTAACTGTCCATTCTACTTCAAGATCGGGGCCTGCCGGCACGGTGATAGGTGTTCGCGGTTGCATACGAAGCCTAGTATAAGCCCGACCCTCTTGCTTTCTAATATGTACCAGAGACCCGACATGATTACTCCTGGTGTCGACGCGCAGGGGAATCCGATTGACCCTCGCAAGATCCAGGACCATTTTGAGGAGTTCTATGAAGATTTATTCCAGGAACTGAGCAAGTATGGGGAGATTGAAAGTTTGAATGTTTGTGACAATCTCGCTGACCACATGGTGGGTAACGTTTATGTTCAATTTCGAGAGGAGGAACAAGCCGCAAATGCTCTTCGGAATCTGAGCGGCAGATTCTATGCTGGACGTCCGATCATTGTTGACTTCTCTCCAGTTACCGATTTTAGAGAAGCTACTTGTAGGCAATATGAAGATAACATGTGTAATCGTGGTGGATATTGCAATTTCATGCATTTGAAGAGGATCAGCAGAGAGCTGAGGCATGAGCTGTTTGCAATTTTCCGTCGAAGGCATAGTCACAGTAGGAGCAGAAGCCGCAGCCCCTATAGGCATCGGAGTTATGATGAACGCTCTTATGGTAGACATGGTCATAGTCGGAGGTATGATGAGAGAGATGCTTATCATGAAAGTCGGAGCAGGAGGCATAGGAGTACAAGCCCTAGTCATAGAAGAAGCAGAAGTCGTAGTCCACGAGGAAGTAAAAATCGAAGTCCAGTTAGAGAAGGGAGTGAAGAGAGGCGTGCTAAAATTGAGCAGTGGAACAGGGAAAGAGAACAACAAGCAAATGATAATAATGCCATTTCTGATGGCAAAATTAGCCATGAGAAAAGTTACAACGGTGATGTAAAGTATGCAAATCAGACCTGTGGTTATGAGGACCAGCAGCAGCGGCAGCCTCCCGAGCAAGGCTATGATTACTGATCTGTTTACCTAAACTTAGATTCAGTCGGGGATTAAGACTGCTGCTCATGACGGACTTGTGAACAATCCAATTATCATATTACGGTTTCTTTTCCCTACAAACTTTTTACACGTTGATATTAAGGAAAATGTGATCTCATCATTATCTAAGTTTTGCAGGTTCAGGTTTCCTGCTTCTAAAAGGTTGTGAAACTAAGTTGTGACCATGAAATTTATGTACAGGTTAATATGGTCCACTGTGTAGGATGATTTGGCTTTACAGGATCTGCAGGTTATGGCTTTCAAAAAACTTGGGTAGAGGAAACGGCCAAGAAGTCGCACGCTCGCTTTGGTGTTTAATATCTATGTTGTGAGGGTTGCAGGTTAGGGATGTTGCTGAAAACATTTTGCATTTATTTCATATATTCTTGTTAGAAGAAAGAAAACCTAGGGTGTGGTGTGGTGTGGCATGCCTTCTGTCATATTTGAAAGGTAATTGTGTGTATCAAGGATTCTTTCTTAGGCTACAAAGCTGATAATTCACAAGGAAGCCAAGTTCATAAATGAAGCCAAATGCTAATTATTGTTAACATTTGCTCGACATAGCTCGAGTATAACCAATATCCAATCGGTGCTCCCTCGATTTGATCATGTGATGAATCGATAAAACTGATACCCTTTTGTATTTGTAATCTACGAGAAGATCTCTGGTACTATCTACGAAGAACAAAACCTGTTTAAACTTCTATAAAAATCGTTTCTAACACCAAATACTCGGTCTTCTCTTATGGATTGTTGCAAACCAATAGATTCTTTACATCTTTATTAACGAAATAAGAAAAGAAGAGAGAAATTACGTGTAAAACTATTATGAGGCAATTACTTTGCAGCCTTTTAGGGGCCGGCTGTGGGGGAGAACTGTGAGGTTTCTGGCTGGAATCATGTGATGAATCGATAAAAC

Coding sequence (CDS)

ATGGCGGAGCATTTGGCTTCCATATTCGGGACGGAGAAGGACAGGGTTAACTGTCCATTCTACTTCAAGATCGGGGCCTGCCGGCACGGTGATAGGTGTTCGCGGTTGCATACGAAGCCTAGTATAAGCCCGACCCTCTTGCTTTCTAATATGTACCAGAGACCCGACATGATTACTCCTGGTGTCGACGCGCAGGGGAATCCGATTGACCCTCGCAAGATCCAGGACCATTTTGAGGAGTTCTATGAAGATTTATTCCAGGAACTGAGCAAGTATGGGGAGATTGAAAGTTTGAATGTTTGTGACAATCTCGCTGACCACATGGTGGGTAACGTTTATGTTCAATTTCGAGAGGAGGAACAAGCCGCAAATGCTCTTCGGAATCTGAGCGGCAGATTCTATGCTGGACGTCCGATCATTGTTGACTTCTCTCCAGTTACCGATTTTAGAGAAGCTACTTGTAGGCAATATGAAGATAACATGTGTAATCGTGGTGGATATTGCAATTTCATGCATTTGAAGAGGATCAGCAGAGAGCTGAGGCATGAGCTGTTTGCAATTTTCCGTCGAAGGCATAGTCACAGTAGGAGCAGAAGCCGCAGCCCCTATAGGCATCGGAGTTATGATGAACGCTCTTATGGTAGACATGGTCATAGTCGGAGGTATGATGAGAGAGATGCTTATCATGAAAGTCGGAGCAGGAGGCATAGGAGTACAAGCCCTAGTCATAGAAGAAGCAGAAGTCGTAGTCCACGAGGAAGTAAAAATCGAAGTCCAGTTAGAGAAGGGAGTGAAGAGAGGCGTGCTAAAATTGAGCAGTGGAACAGGGAAAGAGAACAACAAGCAAATGATAATAATGCCATTTCTGATGGCAAAATTAGCCATGAGAAAAGTTACAACGGTGATGTAAAGTATGCAAATCAGACCTGTGGTTATGAGGACCAGCAGCAGCGGCAGCCTCCCGAGCAAGGCTATGATTACTGA

Protein sequence

MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISRELRHELFAIFRRRHSHSRSRSRSPYRHRSYDERSYGRHGHSRRYDERDAYHESRSRRHRSTSPSHRRSRSRSPRGSKNRSPVREGSEERRAKIEQWNREREQQANDNNAISDGKISHEKSYNGDVKYANQTCGYEDQQQRQPPEQGYDY

Homology

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BLAST of Tan0018726 vs. ExPASy Swiss-Prot
Match: Q9ZQW8 (Splicing factor U2af small subunit A OS=Oryza sativa subsp. japonica OX=39947 GN=U2AF35A PE=2 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 5.2e-107
Identity = 206/290 (71.03%), Postives = 229/290 (78.97%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KPS+SPTLLLSNMY RPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           G+DAQGNPIDP KIQ  FE+FYED+F+ELSKYGEIESL+VCDN ADHM+GNVYVQFREE+
Sbjct: 61  GIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIGNVYVQFREED 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
           QAA AL+ L+GR+Y+GRPIIV+FSPV+DFREATCRQYE+N CNRGGYCNFMH+K I R+L
Sbjct: 121 QAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDL 180

Query: 181 RHELFAIF---RRRHSHSRSRSRSPYRHRSYDERSYGRHGHSRRYDERDAY----HESRS 240
           R  LF      RR HSH RSRS SPY +R    R Y R   SR  D  D Y    H+   
Sbjct: 181 RKRLFGHLHRSRRSHSHGRSRSPSPYHYR----RDYDRRSSSRSRDHDDYYRGGSHDYYR 240

Query: 241 RRHRSTSPSHRRS----RSRSPRGSKNRSPVREGSEERRAKIEQWNRERE 280
              R +S  HR S     SR    S+ RSPVR+GSEERRA+IEQWNRERE
Sbjct: 241 GGSRRSSERHRSSYDSDGSRRRHRSRTRSPVRDGSEERRAQIEQWNRERE 286

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BLAST of Tan0018726 vs. ExPASy Swiss-Prot
Match: Q9FMY5 (Splicing factor U2af small subunit B OS=Arabidopsis thaliana OX=3702 GN=U2AF35B PE=1 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 2.6e-106
Identity = 204/291 (70.10%), Postives = 231/291 (79.38%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVD QG P+DP KIQDHFE+FYED+F+EL+K+GE+ESLNVCDNLADHM+GNVYV F+EE+
Sbjct: 61  GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
            AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYE+N CNRGGYCNFMH+K+ISREL
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180

Query: 181 RHELFAIFR---RRHSHSRSRSRSPYRHRSY-------DERSYGRHGHSRRYDERDAYHE 240
           R +LF  +R   RR S SRSRS SP R R +       D R   RHG+ +R  +R   H+
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDRHGNGKRSSDRSERHD 240

Query: 241 -SRSRRHRSTSPSHRRSRSRSPRGSKNRSPVREGSEERRAKIEQWNREREQ 281
                R R  SP     RSRSPR       VREGSEERRA+IEQWNRER++
Sbjct: 241 RDGGGRRRHGSP----KRSRSPRN------VREGSEERRARIEQWNRERDE 281

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BLAST of Tan0018726 vs. ExPASy Swiss-Prot
Match: Q9S709 (Splicing factor U2af small subunit A OS=Arabidopsis thaliana OX=3702 GN=U2AF35A PE=1 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 8.2e-105
Identity = 199/291 (68.38%), Postives = 227/291 (78.01%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQG P+DPRKIQ+HFE+F+EDLF+EL K+GEIESLN+CDNLADHM+GNVYVQF+EE+
Sbjct: 61  GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
           QAA AL+ L GRFY+GRPII DFSPVTDFREATCRQYE+N CNRGGYCNFMH+K +SREL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180

Query: 181 RHELFAIFRRRH-----SHSRSRSRSPYRHRSYDERSYGRHGHSRRYDERDAYHESRSRR 240
           R +LF  +RR +     S SRSRS SP   R  D R       S R  +R+ Y     +R
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDREFYRHGSGKR 240

Query: 241 HRSTSPSHRRSRSR-----SPRGSKNRSPVREGSEERRAKIEQWNREREQQ 282
               S    R  SR     SP+   +    REGSEERRA+IEQWNRERE++
Sbjct: 241 SSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWNREREEK 291

[Close]

BLAST of Tan0018726 vs. ExPASy Swiss-Prot
Match: Q6AUG0 (Splicing factor U2af small subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=U2AF35B PE=2 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 5.7e-98
Identity = 193/306 (63.07%), Postives = 223/306 (72.88%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P++SPT++L+NMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQG PIDP K+Q+HFE+FYED+++ELSK+GE+E+LNVCDNLADHM+GNVYVQFREEE
Sbjct: 61  GVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
           QA  A   L GRFY+GRPIIV++SPVTDFREATCRQ+E+N CNRGGYCNFMH+K+I REL
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180

Query: 181 RHELFAIFRRRHSHSRSRSRSP------------------YRHRSYDERSYGRHGHSRRY 240
           R +L+   R R SH RSRS SP                  YR      R  G  G    Y
Sbjct: 181 RRKLYG-GRSRRSHGRSRSPSPRHRRGNRDRDDFRRERDGYRGGGDGYRGGGGGGGGDGY 240

Query: 241 DERDAY-------HESRSRRHRSTSPSHRRSRSRSPRGSKNRSPVREGSEERRAKIEQWN 282
              D+Y             R+       RR     PR  + RSPVRE SEERRAKIEQWN
Sbjct: 241 RGGDSYRGGGGGGRRGGGSRYDRYDDGGRRRHGSPPR--RARSPVRESSEERRAKIEQWN 300

[Close]

BLAST of Tan0018726 vs. ExPASy Swiss-Prot
Match: A1A4K8 (Splicing factor U2AF 35 kDa subunit OS=Bos taurus OX=9913 GN=U2AF1 PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.3e-65
Identity = 131/237 (55.27%), Postives = 164/237 (69.20%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P   + 
Sbjct: 1   MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQEL-SKYGEIESLNVCDNLADHMVGNVYVQFREE 120
             D     +   ++Q+H++EF+E++F E+  KYGE+E +NVCDNL DH+VGNVYV+FR E
Sbjct: 61  SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120

Query: 121 EQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISRE 180
           E A  A+ +L+ R++ G+PI  + SPVTDFREA CRQYE   C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180

Query: 181 LRHELFAIFRRRH-SHSRSRSRSPYRHRSYDERSYGRHGHSRRYDERDAYHESRSRR 236
           LR EL+   R++H S SRSR R   R R       G  G  R  D R +    RS R
Sbjct: 181 LRRELYGRRRKKHRSRSRSRERRS-RSRDRGRGGGGGGGGGRERDRRRSRDRERSGR 236

[Close]

BLAST of Tan0018726 vs. NCBI nr
Match: XP_004139466.1 (splicing factor U2af small subunit B [Cucumis sativus] >XP_011654262.1 splicing factor U2af small subunit B [Cucumis sativus] >KGN64894.1 hypothetical protein Csa_022738 [Cucumis sativus])

HSP 1 Score: 600.5 bits (1547), Expect = 8.6e-168
Identity = 302/328 (92.07%), Postives = 315/328 (96.04%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPR IQDHFEEFYEDLFQEL+KYGEIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAQGNPIDPRNIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
           QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYE+NMCNRGGYCNFMHLKRI REL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGREL 180

Query: 181 RHELFAIFRRRHSHSRSRSRSPYRHRSYDERSYGRHGHSRRYDERDAYHESRSRRHRSTS 240
           RHELFA++RRRHSHSRSRSRSPYRHRSY+ERSYG+HGHSRRYDERDAYHESRSRRHR+TS
Sbjct: 181 RHELFAMYRRRHSHSRSRSRSPYRHRSYEERSYGKHGHSRRYDERDAYHESRSRRHRTTS 240

Query: 241 PSHRRSRSRSPRGSKNRSPVREGSEERRAKIEQWNREREQQANDNNAIS-DGKISHEKSY 300
           P H RSRSRSPRG KNRSPVREGSEERRAKIEQWN+ERE Q NDNNA S D + +HEKSY
Sbjct: 241 PGH-RSRSRSPRGRKNRSPVREGSEERRAKIEQWNKERE-QGNDNNANSDDNRNNHEKSY 300

Query: 301 NGDVKYANQTCGYEDQQQRQPPEQGYDY 328
           + +VKYANQTCGYE+QQQRQPPEQGY Y
Sbjct: 301 DSEVKYANQTCGYEEQQQRQPPEQGYGY 326

[Close]

BLAST of Tan0018726 vs. NCBI nr
Match: XP_038894442.1 (splicing factor U2af small subunit B-like [Benincasa hispida] >XP_038894443.1 splicing factor U2af small subunit B-like [Benincasa hispida] >XP_038894444.1 splicing factor U2af small subunit B-like [Benincasa hispida] >XP_038894445.1 splicing factor U2af small subunit B-like [Benincasa hispida])

HSP 1 Score: 598.2 bits (1541), Expect = 4.3e-167
Identity = 301/327 (92.05%), Postives = 312/327 (95.41%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPRKIQDHFEEFYEDLFQEL+KYGEIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
           QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYE+NMCNRGGYCNFMHLKRISREL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180

Query: 181 RHELFAIFRRRHSHSRSRSRSPYRHRSYDERSYGRHGHSRRYDERDAYHESRSRRHRSTS 240
           RHELFAI+RRRHS SRSRSRSPYRHRSY+ERSYGRHGHSRRYDERDAY+ESR  RHR+TS
Sbjct: 181 RHELFAIYRRRHSRSRSRSRSPYRHRSYEERSYGRHGHSRRYDERDAYYESRGMRHRTTS 240

Query: 241 PSHRRSRSRSPRGSKNRSPVREGSEERRAKIEQWNREREQQANDNNAISDGKISHEKSYN 300
           P H RSRSRSPRG KNRSPVREGSEE RAKIEQWNRERE Q NDNN  SD K SHEKSY+
Sbjct: 241 PGH-RSRSRSPRGRKNRSPVREGSEESRAKIEQWNRERE-QGNDNNGNSDNKNSHEKSYS 300

Query: 301 GDVKYANQTCGYEDQQQRQPPEQGYDY 328
           GDVKY+NQTCGYE+Q+Q+ PPEQGY Y
Sbjct: 301 GDVKYSNQTCGYEEQRQQLPPEQGYGY 325

[Close]

BLAST of Tan0018726 vs. NCBI nr
Match: XP_008461981.1 (PREDICTED: splicing factor U2af small subunit B-like [Cucumis melo] >XP_008461988.1 PREDICTED: splicing factor U2af small subunit B-like [Cucumis melo] >KAA0065889.1 splicing factor U2af small subunit B-like [Cucumis melo var. makuwa] >TYK15128.1 splicing factor U2af small subunit B-like [Cucumis melo var. makuwa])

HSP 1 Score: 597.0 bits (1538), Expect = 9.5e-167
Identity = 302/328 (92.07%), Postives = 313/328 (95.43%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPRKIQDHFEEFYEDLFQEL+KYGEIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
           QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYE+NMCNRGGYCNFMHLKRI REL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGREL 180

Query: 181 RHELFAIFRRRHSHSRSRSRSPYRHRSYDERSYGRHGHSRRYDERDAYHESRSRRHRSTS 240
           RHELFA++RRR SHSRSRSRSPYRHRSY+ERSYGRHGHSRRYDERDAYHE+RSRR R+TS
Sbjct: 181 RHELFAMYRRRRSHSRSRSRSPYRHRSYEERSYGRHGHSRRYDERDAYHENRSRRRRTTS 240

Query: 241 PSHRRSRSRSPRGSKNRSPVREGSEERRAKIEQWNREREQQANDNNAIS-DGKISHEKSY 300
           P H RSRSRSPRG KNRSP REGSEERRAKIEQWNRERE Q NDNNA S D + SHEKSY
Sbjct: 241 PGH-RSRSRSPRGRKNRSPAREGSEERRAKIEQWNRERE-QGNDNNAKSDDNRNSHEKSY 300

Query: 301 NGDVKYANQTCGYEDQQQRQPPEQGYDY 328
           + +VKYANQTCGYE+QQQRQPPEQGY Y
Sbjct: 301 DSEVKYANQTCGYEEQQQRQPPEQGYGY 326

[Close]

BLAST of Tan0018726 vs. NCBI nr
Match: XP_023519661.1 (splicing factor U2af small subunit B-like [Cucurbita pepo subsp. pepo] >XP_023519662.1 splicing factor U2af small subunit B-like [Cucurbita pepo subsp. pepo] >XP_023519664.1 splicing factor U2af small subunit B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 596.7 bits (1537), Expect = 1.2e-166
Identity = 301/330 (91.21%), Postives = 313/330 (94.85%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPRKIQDHFEEFYEDLFQEL+KYGEIESLNVCDNLADHMVGNVYVQF+EEE
Sbjct: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFQEEE 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
           QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYE+NMCNRGGYCNFMHLKRISREL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180

Query: 181 RHELFAIFRRRHSHSRSRSRSPYRHRSYDERSYGRHGHSRRYDERDAYHESRSRRHRSTS 240
           RHELFA + RR SHSRSRSRSPYRHRSY+ER YGRHGHSRRYDERDAYH+SR+RRHRSTS
Sbjct: 181 RHELFASYHRRRSHSRSRSRSPYRHRSYEERHYGRHGHSRRYDERDAYHDSRNRRHRSTS 240

Query: 241 PSHRRSRSRSPRGSKNRSPVREGSEERRAKIEQWNREREQQANDNNAISDG-KISHEKSY 300
           P HR SRSRSPRG KNRSPVREGSEERRAKIEQWNRE+EQQ N NNA SDG + SHEKSY
Sbjct: 241 PGHRGSRSRSPRGRKNRSPVREGSEERRAKIEQWNREKEQQENYNNANSDGNENSHEKSY 300

Query: 301 NGDVKYANQTCGYEDQQQRQ--PPEQGYDY 328
           NGDV+Y NQTCGY+ QQQ+Q  PPEQGY Y
Sbjct: 301 NGDVQYENQTCGYKQQQQQQQKPPEQGYGY 330

[Close]

BLAST of Tan0018726 vs. NCBI nr
Match: XP_022964867.1 (splicing factor U2af small subunit B-like [Cucurbita moschata] >XP_022964868.1 splicing factor U2af small subunit B-like [Cucurbita moschata] >XP_022964870.1 splicing factor U2af small subunit B-like [Cucurbita moschata] >KAG7019309.1 Splicing factor U2af small subunit A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 595.5 bits (1534), Expect = 2.8e-166
Identity = 300/330 (90.91%), Postives = 313/330 (94.85%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPRKIQDHFEEFYEDLFQEL+KYGEIESLNVCDNLADHMVGNVYVQF+EEE
Sbjct: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFQEEE 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
           QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYE+NMCNRGGYCNFMHLKRISREL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180

Query: 181 RHELFAIFRRRHSHSRSRSRSPYRHRSYDERSYGRHGHSRRYDERDAYHESRSRRHRSTS 240
           RHELFA + RR SHSRSRSRSPYRHRSY+ER YGRHGHSRRYDERDAYH+SR+RRHRSTS
Sbjct: 181 RHELFASYHRRRSHSRSRSRSPYRHRSYEERHYGRHGHSRRYDERDAYHDSRNRRHRSTS 240

Query: 241 PSHRRSRSRSPRGSKNRSPVREGSEERRAKIEQWNREREQQANDNNAISDG-KISHEKSY 300
           P HR SRSRSPRG KNRSPVREGSEERRAKIEQWNRE+EQQ N NN+ SDG + SHEKSY
Sbjct: 241 PGHRGSRSRSPRGRKNRSPVREGSEERRAKIEQWNREKEQQKNYNNSNSDGHENSHEKSY 300

Query: 301 NGDVKYANQTCGYEDQQQRQ--PPEQGYDY 328
           NGDV+Y NQTCGY+ QQQ+Q  PPEQGY Y
Sbjct: 301 NGDVQYENQTCGYKQQQQQQQKPPEQGYGY 330

[Close]

BLAST of Tan0018726 vs. ExPASy TrEMBL
Match: A0A0A0LVA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G145960 PE=4 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 4.2e-168
Identity = 302/328 (92.07%), Postives = 315/328 (96.04%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPR IQDHFEEFYEDLFQEL+KYGEIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAQGNPIDPRNIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
           QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYE+NMCNRGGYCNFMHLKRI REL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGREL 180

Query: 181 RHELFAIFRRRHSHSRSRSRSPYRHRSYDERSYGRHGHSRRYDERDAYHESRSRRHRSTS 240
           RHELFA++RRRHSHSRSRSRSPYRHRSY+ERSYG+HGHSRRYDERDAYHESRSRRHR+TS
Sbjct: 181 RHELFAMYRRRHSHSRSRSRSPYRHRSYEERSYGKHGHSRRYDERDAYHESRSRRHRTTS 240

Query: 241 PSHRRSRSRSPRGSKNRSPVREGSEERRAKIEQWNREREQQANDNNAIS-DGKISHEKSY 300
           P H RSRSRSPRG KNRSPVREGSEERRAKIEQWN+ERE Q NDNNA S D + +HEKSY
Sbjct: 241 PGH-RSRSRSPRGRKNRSPVREGSEERRAKIEQWNKERE-QGNDNNANSDDNRNNHEKSY 300

Query: 301 NGDVKYANQTCGYEDQQQRQPPEQGYDY 328
           + +VKYANQTCGYE+QQQRQPPEQGY Y
Sbjct: 301 DSEVKYANQTCGYEEQQQRQPPEQGYGY 326

[Close]

BLAST of Tan0018726 vs. ExPASy TrEMBL
Match: A0A1S3CFU2 (splicing factor U2af small subunit B-like OS=Cucumis melo OX=3656 GN=LOC103500459 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 4.6e-167
Identity = 302/328 (92.07%), Postives = 313/328 (95.43%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPRKIQDHFEEFYEDLFQEL+KYGEIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
           QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYE+NMCNRGGYCNFMHLKRI REL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGREL 180

Query: 181 RHELFAIFRRRHSHSRSRSRSPYRHRSYDERSYGRHGHSRRYDERDAYHESRSRRHRSTS 240
           RHELFA++RRR SHSRSRSRSPYRHRSY+ERSYGRHGHSRRYDERDAYHE+RSRR R+TS
Sbjct: 181 RHELFAMYRRRRSHSRSRSRSPYRHRSYEERSYGRHGHSRRYDERDAYHENRSRRRRTTS 240

Query: 241 PSHRRSRSRSPRGSKNRSPVREGSEERRAKIEQWNREREQQANDNNAIS-DGKISHEKSY 300
           P H RSRSRSPRG KNRSP REGSEERRAKIEQWNRERE Q NDNNA S D + SHEKSY
Sbjct: 241 PGH-RSRSRSPRGRKNRSPAREGSEERRAKIEQWNRERE-QGNDNNAKSDDNRNSHEKSY 300

Query: 301 NGDVKYANQTCGYEDQQQRQPPEQGYDY 328
           + +VKYANQTCGYE+QQQRQPPEQGY Y
Sbjct: 301 DSEVKYANQTCGYEEQQQRQPPEQGYGY 326

[Close]

BLAST of Tan0018726 vs. ExPASy TrEMBL
Match: A0A5D3CV58 (Splicing factor U2af small subunit B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00620 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 4.6e-167
Identity = 302/328 (92.07%), Postives = 313/328 (95.43%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPRKIQDHFEEFYEDLFQEL+KYGEIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
           QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYE+NMCNRGGYCNFMHLKRI REL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGREL 180

Query: 181 RHELFAIFRRRHSHSRSRSRSPYRHRSYDERSYGRHGHSRRYDERDAYHESRSRRHRSTS 240
           RHELFA++RRR SHSRSRSRSPYRHRSY+ERSYGRHGHSRRYDERDAYHE+RSRR R+TS
Sbjct: 181 RHELFAMYRRRRSHSRSRSRSPYRHRSYEERSYGRHGHSRRYDERDAYHENRSRRRRTTS 240

Query: 241 PSHRRSRSRSPRGSKNRSPVREGSEERRAKIEQWNREREQQANDNNAIS-DGKISHEKSY 300
           P H RSRSRSPRG KNRSP REGSEERRAKIEQWNRERE Q NDNNA S D + SHEKSY
Sbjct: 241 PGH-RSRSRSPRGRKNRSPAREGSEERRAKIEQWNRERE-QGNDNNAKSDDNRNSHEKSY 300

Query: 301 NGDVKYANQTCGYEDQQQRQPPEQGYDY 328
           + +VKYANQTCGYE+QQQRQPPEQGY Y
Sbjct: 301 DSEVKYANQTCGYEEQQQRQPPEQGYGY 326

[Close]

BLAST of Tan0018726 vs. ExPASy TrEMBL
Match: A0A6J1HM65 (splicing factor U2af small subunit B-like OS=Cucurbita moschata OX=3662 GN=LOC111464850 PE=4 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 1.3e-166
Identity = 300/330 (90.91%), Postives = 313/330 (94.85%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPRKIQDHFEEFYEDLFQEL+KYGEIESLNVCDNLADHMVGNVYVQF+EEE
Sbjct: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFQEEE 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
           QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYE+NMCNRGGYCNFMHLKRISREL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180

Query: 181 RHELFAIFRRRHSHSRSRSRSPYRHRSYDERSYGRHGHSRRYDERDAYHESRSRRHRSTS 240
           RHELFA + RR SHSRSRSRSPYRHRSY+ER YGRHGHSRRYDERDAYH+SR+RRHRSTS
Sbjct: 181 RHELFASYHRRRSHSRSRSRSPYRHRSYEERHYGRHGHSRRYDERDAYHDSRNRRHRSTS 240

Query: 241 PSHRRSRSRSPRGSKNRSPVREGSEERRAKIEQWNREREQQANDNNAISDG-KISHEKSY 300
           P HR SRSRSPRG KNRSPVREGSEERRAKIEQWNRE+EQQ N NN+ SDG + SHEKSY
Sbjct: 241 PGHRGSRSRSPRGRKNRSPVREGSEERRAKIEQWNREKEQQKNYNNSNSDGHENSHEKSY 300

Query: 301 NGDVKYANQTCGYEDQQQRQ--PPEQGYDY 328
           NGDV+Y NQTCGY+ QQQ+Q  PPEQGY Y
Sbjct: 301 NGDVQYENQTCGYKQQQQQQQKPPEQGYGY 330

[Close]

BLAST of Tan0018726 vs. ExPASy TrEMBL
Match: A0A6J1I2J7 (splicing factor U2af small subunit B-like OS=Cucurbita maxima OX=3661 GN=LOC111469321 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 6.2e-164
Identity = 298/330 (90.30%), Postives = 311/330 (94.24%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPRKIQDHFEEFYEDLFQEL+KYGEIESLNVCDNLADHMVGNVYVQF+EEE
Sbjct: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFQEEE 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
           QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYE+NMCNRGGYCNFMHLKRISREL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180

Query: 181 RHELFAIFRRRHSHSRSRSRSPYRHRSYDERSYGRHGHSRRYDERDAYHESRSRRHRSTS 240
           RHELFA + RR  HSRSRSRSPYRHRSY+ER YGRHGHSRRYDERDAYH+SR+RRHRSTS
Sbjct: 181 RHELFASYHRRRGHSRSRSRSPYRHRSYEERHYGRHGHSRRYDERDAYHDSRNRRHRSTS 240

Query: 241 PSHRRSRSRSPRGSKNRSPVREGSEERRAKIEQWNREREQQANDNNAISDG-KISHEKSY 300
           P HR SRSRSPRG KNRSPVRE SEERRAKIEQWNRE+EQ+ N NNA SDG + SHEKSY
Sbjct: 241 PGHRGSRSRSPRGRKNRSPVREESEERRAKIEQWNREKEQE-NYNNANSDGNEHSHEKSY 300

Query: 301 NGDVKYANQTCGY--EDQQQRQPPEQGYDY 328
           NGDV+Y NQTCGY  + QQQ+QPPEQGY Y
Sbjct: 301 NGDVQYENQTCGYKQQQQQQQQPPEQGYGY 329

[Close]

BLAST of Tan0018726 vs. TAIR 10
Match: AT5G42820.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 386.7 bits (992), Expect = 1.8e-107
Identity = 204/291 (70.10%), Postives = 231/291 (79.38%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVD QG P+DP KIQDHFE+FYED+F+EL+K+GE+ESLNVCDNLADHM+GNVYV F+EE+
Sbjct: 61  GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
            AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYE+N CNRGGYCNFMH+K+ISREL
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180

Query: 181 RHELFAIFR---RRHSHSRSRSRSPYRHRSY-------DERSYGRHGHSRRYDERDAYHE 240
           R +LF  +R   RR S SRSRS SP R R +       D R   RHG+ +R  +R   H+
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDRHGNGKRSSDRSERHD 240

Query: 241 -SRSRRHRSTSPSHRRSRSRSPRGSKNRSPVREGSEERRAKIEQWNREREQ 281
                R R  SP     RSRSPR       VREGSEERRA+IEQWNRER++
Sbjct: 241 RDGGGRRRHGSP----KRSRSPRN------VREGSEERRARIEQWNRERDE 281

[Close]

BLAST of Tan0018726 vs. TAIR 10
Match: AT5G42820.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 386.7 bits (992), Expect = 1.8e-107
Identity = 204/291 (70.10%), Postives = 231/291 (79.38%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVD QG P+DP KIQDHFE+FYED+F+EL+K+GE+ESLNVCDNLADHM+GNVYV F+EE+
Sbjct: 61  GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
            AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYE+N CNRGGYCNFMH+K+ISREL
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180

Query: 181 RHELFAIFR---RRHSHSRSRSRSPYRHRSY-------DERSYGRHGHSRRYDERDAYHE 240
           R +LF  +R   RR S SRSRS SP R R +       D R   RHG+ +R  +R   H+
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDRHGNGKRSSDRSERHD 240

Query: 241 -SRSRRHRSTSPSHRRSRSRSPRGSKNRSPVREGSEERRAKIEQWNREREQ 281
                R R  SP     RSRSPR       VREGSEERRA+IEQWNRER++
Sbjct: 241 RDGGGRRRHGSP----KRSRSPRN------VREGSEERRARIEQWNRERDE 281

[Close]

BLAST of Tan0018726 vs. TAIR 10
Match: AT1G27650.1 (U2 snRNP auxiliary factor small subunit, putative )

HSP 1 Score: 381.7 bits (979), Expect = 5.8e-106
Identity = 199/291 (68.38%), Postives = 227/291 (78.01%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQG P+DPRKIQ+HFE+F+EDLF+EL K+GEIESLN+CDNLADHM+GNVYVQF+EE+
Sbjct: 61  GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120

Query: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNFMHLKRISREL 180
           QAA AL+ L GRFY+GRPII DFSPVTDFREATCRQYE+N CNRGGYCNFMH+K +SREL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180

Query: 181 RHELFAIFRRRH-----SHSRSRSRSPYRHRSYDERSYGRHGHSRRYDERDAYHESRSRR 240
           R +LF  +RR +     S SRSRS SP   R  D R       S R  +R+ Y     +R
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDREFYRHGSGKR 240

Query: 241 HRSTSPSHRRSRSR-----SPRGSKNRSPVREGSEERRAKIEQWNREREQQ 282
               S    R  SR     SP+   +    REGSEERRA+IEQWNRERE++
Sbjct: 241 SSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWNREREEK 291

[Close]

BLAST of Tan0018726 vs. TAIR 10
Match: AT1G27650.2 (U2 snRNP auxiliary factor small subunit, putative )

HSP 1 Score: 278.5 bits (711), Expect = 7.0e-75
Identity = 152/241 (63.07%), Postives = 178/241 (73.86%), Query Frame = 0


Query: 51  MYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVG 110
           MYQRPDMITPGVDAQG P+DPRKIQ+HFE+F+EDLF+EL K+GEIESLN+CDNLADHM+G
Sbjct: 1   MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 60

Query: 111 NVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEDNMCNRGGYCNF 170
           NVYVQF+EE+QAA AL+ L GRFY+GRPII DFSPVTDFREATCRQYE+N CNRGGYCNF
Sbjct: 61  NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 120

Query: 171 MHLKRISRELRHELFAIFRRRH-----SHSRSRSRSPYRHRSYDERSYGRHGHSRRYDER 230
           MH+K +SRELR +LF  +RR +     S SRSRS SP   R  D R       S R  +R
Sbjct: 121 MHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDR 180

Query: 231 DAYHESRSRRHRSTSPSHRRSRSR-----SPRGSKNRSPVREGSEERRAKIEQWNREREQ 282
           + Y     +R    S    R  SR     SP+   +    REGSEERRA+IEQWNRERE+
Sbjct: 181 EFYRHGSGKRSSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWNREREE 240

[Close]

BLAST of Tan0018726 vs. TAIR 10
Match: AT1G10320.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-26
Identity = 109/351 (31.05%), Postives = 167/351 (47.58%), Query Frame = 0


Query: 9   FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNP 68
           FGTE+D+ +CPF+ K GACR G RCSR+H  P+ S TLL+ NMY  P  IT   D +G  
Sbjct: 237 FGTEQDKAHCPFHLKTGACRFGQRCSRVHFYPNKSCTLLMKNMYNGPG-ITWEQD-EGLE 296

Query: 69  IDPRKIQDHFEEFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEEQAANALRN 128
               + +  +EEFYED+  E  KYGE+ +  VC N + H+ GNVYV +R  E A  A ++
Sbjct: 297 YTDEEAELCYEEFYEDVHTEFLKYGELVNFKVCRNGSFHLKGNVYVHYRSLESAILAYQS 356

Query: 129 LSGRFYAGRPIIVDFSPVTDFREATCRQYEDN---MCNRGGYCNFMHLKR---------- 188
           ++GR++AG+ +  +F  ++ ++ A C +Y  +    C+RG  CNF+H  R          
Sbjct: 357 INGRYFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGSACNFIHCFRNPGGDYEWAD 416

Query: 189 ----ISRELRHELFAIF----RRRHSHSRSRS-------RSPYRHRSYDERSYGR-HGH- 248
                 R   H++ ++F     +   H  S S        S   HR    RS  R H H 
Sbjct: 417 HDRPPPRFWIHKMTSLFGYSDEKHMEHESSGSLNDSISDLSTDSHRQPSRRSRSRDHDHA 476

Query: 249 ---------SRRY--DERDAYHESRSRRHRSTSPSHRRSRSRSPRGSKNRSPVREGSEER 308
                    SR+Y  D +D+  E + RRH         S SR     +     R  +++ 
Sbjct: 477 NVGSTPSYRSRKYHGDTQDSTREDKLRRHAENCHDGDDSPSRDGSLEREMYKERRYAKDT 536

Query: 309 RAKIEQWNREREQQANDNNAISDGKISHEKSYNGDVKYANQTCGYEDQQQR 319
             +  +W+            I  G+ S + S +GD  Y  +  G++ + +R
Sbjct: 537 LHRDSRWSEHSPGHRVGRKRI-HGRYSDDDSADGD-DYGRRGTGHKRKPRR 583

The following BLAST results are available for this feature:

BLAST of Tan0018726 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQW8	5.2e-107	71.03	Splicing factor U2af small subunit A OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q9FMY5	2.6e-106	70.10	Splicing factor U2af small subunit B OS=Arabidopsis thaliana OX=3702 GN=U2AF35B ...	[more]
Q9S709	8.2e-105	68.38	Splicing factor U2af small subunit A OS=Arabidopsis thaliana OX=3702 GN=U2AF35A ...	[more]
Q6AUG0	5.7e-98	63.07	Splicing factor U2af small subunit B OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
A1A4K8	1.3e-65	55.27	Splicing factor U2AF 35 kDa subunit OS=Bos taurus OX=9913 GN=U2AF1 PE=2 SV=1	[more]

BLAST of Tan0018726 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139466.1	8.6e-168	92.07	splicing factor U2af small subunit B [Cucumis sativus] >XP_011654262.1 splicing ...	[more]
XP_038894442.1	4.3e-167	92.05	splicing factor U2af small subunit B-like [Benincasa hispida] >XP_038894443.1 sp...	[more]
XP_008461981.1	9.5e-167	92.07	PREDICTED: splicing factor U2af small subunit B-like [Cucumis melo] >XP_00846198...	[more]
XP_023519661.1	1.2e-166	91.21	splicing factor U2af small subunit B-like [Cucurbita pepo subsp. pepo] >XP_02351...	[more]
XP_022964867.1	2.8e-166	90.91	splicing factor U2af small subunit B-like [Cucurbita moschata] >XP_022964868.1 s...	[more]

BLAST of Tan0018726 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVA4	4.2e-168	92.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G145960 PE=4 SV=1	[more]
A0A1S3CFU2	4.6e-167	92.07	splicing factor U2af small subunit B-like OS=Cucumis melo OX=3656 GN=LOC10350045...	[more]
A0A5D3CV58	4.6e-167	92.07	Splicing factor U2af small subunit B-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1HM65	1.3e-166	90.91	splicing factor U2af small subunit B-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1I2J7	6.2e-164	90.30	splicing factor U2af small subunit B-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Tan0018726 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42820.2	1.8e-107	70.10	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT5G42820.1	1.8e-107	70.10	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G27650.1	5.8e-106	68.38	U2 snRNP auxiliary factor small subunit, putative	[more]
AT1G27650.2	7.0e-75	63.07	U2 snRNP auxiliary factor small subunit, putative	[more]
AT1G10320.1	2.1e-26	31.05	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 264..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..327
None	No IPR available	PANTHER	PTHR12620:SF39	SPLICING FACTOR U2AF SMALL SUBUNIT A	coord: 1..308
None	No IPR available	CDD	cd12539	RRM_U2AF35B	coord: 44..145 e-value: 1.33329E-64 score: 197.587
IPR009145	U2 auxiliary factor small subunit	PRINTS	PR01848	U2AUXFACTOR	coord: 37..57 score: 57.14 coord: 18..37 score: 85.68 coord: 75..90 score: 51.42 coord: 130..154 score: 62.0 coord: 103..125 score: 65.42 coord: 165..177 score: 66.78
IPR009145	U2 auxiliary factor small subunit	PANTHER	PTHR12620	U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT	coord: 1..308
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 13..39 e-value: 0.0065 score: 25.7 coord: 148..174 e-value: 0.44 score: 19.1
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 14..37 e-value: 5.3E-7 score: 29.4
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 12..40 score: 13.112443
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 148..175 score: 10.267546
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 45..142 e-value: 1.8E-4 score: 30.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 83..139 e-value: 3.0E-7 score: 30.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 44..146 score: 11.861064
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 73..142 e-value: 6.9E-6 score: 35.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 43..145 e-value: 4.9E-31 score: 109.1
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 32..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0018726.1	Tan0018726.1	mRNA
Tan0018726.2	Tan0018726.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0089701	U2AF complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030628	pre-mRNA 3'-splice site binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding