Tan0018684 (gene) Snake gourd v1

Overview
NameTan0018684
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages;
LocationLG03: 70595102 .. 70600341 (+)
RNA-Seq ExpressionTan0018684
SyntenyTan0018684
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTGGTTAATCAGAAGAAGCAGAATATAAAAACTCCAGTGTCATTTCCCCGTGCTTCTCCTTTGCTTTTGCCCCACGCTTTCACTCTCAATCTTCTTCGCAGAGGAAAGAACTCGAGCTCTTCTCTTGCTGCCTGAAGCGTCCTCTTCTCCGGTGTTCGTTTGTTTGAACTAAGAACTTGCAGTCGATACCATGGATGATCGGAAGGAGGTCGTTTTTCTCTCTGTTTTGCCTGGCTGCTTGTGTGATTTTTCTTTTTTTCGTTCCTTTCTCTGTTTTTGTTAATGTTTCTTTCCTTAGGTAAAACCTAGGGTTTCGTTTTGGTCTTTGTTTGTTAAAGAGAGGAAATGCATACGTTTCTTGATCCGAGTTGAATAGTTACGCGCTACTATTGAAGAGGTTAGATTGTTTTTTCTTTGGCGTTCAACCTCGCCTATTGAAAACAATCATGGAAGCATCAGAATCTCGTAATTATTAGCATATATATTTTTTTTGTCTGGTCAAACTGTGAATTGAGTTTGAAATGTTGCTCTGTTGTTTGTTTCTTTTGAGCGTAATCATCGCTGTTTTTGTGGCGTTTCATCTTGCACATGCATATGTATTTTTATTTTCCTGTTTGAAATCTGAGATTCGATTTTTATTTTTCCTTATATTTCCGCCTTTTTTTCGGTCGAAAATTTTCACATTGCTTTTAAAATTCAGAAACGTAATTTGATTAGTTCGCTATCTTGGTTGGATTTGGACGTCTGTGTTTTGTCACGGGAGAAATTGGCGGTATGCTTTTGCTTTTTAACCGTTTATGATTGATTCACGGAGGCAGTCAAGTTACTTTTTCTAAGCTGGGAAGCAGTCAAACCTGTCAACTTTTTCTTCTATCCTCTCGGCAATAATTTTCCTATGGTTCCCAAACTTCAACTCTTTTAAGTTTAGGCGATGAGTTTTCTTCAGCTGCTCTTCTATTTCAACCATTGACTTTTTATTTGTTTATTTATATTTTAGCATGTTTTGAAGACTGAAAAATAAAATTTTAGGAAAGTTGCTGTCACTGACTTTGAAATTGGAAAAACTTATCCAATTATTATAATCTACAGATAACGAATCGAACTTTAATTTGATTTATTAAAAAAAAAATTAGGAGAAGGAATTTTGTTGGCTCTAATAAGATAGTAAATTGGAAGCAGATAAAAGAAAAACCTAAAATGGTCAGTTTCCGATACTCTGCGCTTGTTATAACGCAAATACTAAGGAGAGGCAAGTAATGAATTAGACAATGAGAGGTTACCGTGAAATCTCTGACGTGGTGTGTGCTTTTGGTGGCAATAAATATGTTAGTGCTTTAAAATAGAAAAGATATAATTGAGTTTTTTTTATTGGTGTTAAAAAAAATAATCTAAGATGTAACTGACATTCTTGGCTTCAACTTAGCGATGCGTTACTTTGTTGTCTGCAGAAAACTGCCCCCTGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACAGGTGCCTGACTACTCTCTTGATTTCTCAAAAATTAGGGAAAATAGGAAACAAAACAAGAGAGACGTGTCTCGAGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCTCAGCCGCTCCCCCAACCACAACAGACTCTTTCCCCACTGAAAACCACCACCCCTATCATCAGAGTCACCATCCTCCACCAGTAAGATTCTTGCTCCTCCCTAAAATTTGATATTGGTAACTTTTTGATTGTTTGATAGGGACTTGCATGTTCTTCTAAACGCATACCGTTTGGACAACCCAAGAATTGGTTGGGTTGGGTTGGGTTACATCAATGTGTTGTATGTGTCTGGAAGGTTCTTTATCAAACTCGTGGGTCCATGCTGTCTGCTATTATCCATTAACTTGTGGGTACAGCTATCGATTGTGGAAAAATAAATATCAATAAAAACCCAAAAGTCTGAAGCTCAAAAGAAACACTTTCCTGAAGTGTCATCTAATTTTATGATGAATAAGCTAATGAAAGTTTTAATTCCTTGGATATCAGATGTCCTACTATCCTAAATGTTTTAGGATGAGGTAATTGTTCTGGGCACCTATAGTTACGTGTACATGTAGAGAAAAAAAGATCTCATTGACTTCCCATATTTGCTATTTTATATATTGTTTAATGAGCATAACTCATCGTGGCTCTTGAAATTTAGTCAAGGTTCTTTGTTTTACTGCTAGAGCGACCCATTGGTTTTACTGTTTGGATTATTTAGAAGGTTAGCTATTATATTGGTGAAGTGAAACATGCTTCATGACTGCTTATAAACAAGCTTAAACATGTTTCAGTTTTTGAGAAGAGAATTCTCATTTACTCTTTGTTAATGTTAATCACGTCTGTAATGGTACATCCTATGTCCAGAGCATAAAATTTAAACGAGAACAATAAAACCAAGTGATGATTGGAAAAATATTAAAATAAATTGTTTAAGAAGCTGAAAGCATGTCGTCGTCATGTCAGTTCAGTTGAAGGCGGAATTTTAGATTATTCATTACTCTAATTAGAGTACCAATCACAGGCCGTGATTCTTGTACATCGTTTAGATTTTATGCGGGTAGTGTGTACTGTTCAATTAGAATGAGAGAGAGATTGACTTTAAGTTAGGTTTGTGGAAACAAGTTGGCCGCTGGGTCCCCTTCGGACCTAGCCCGAAAGCATAAGTGGTGGGCATTCGATTGGTGTTTGCTGCCATCTCTCTCGTTCATATTAAGGAACGGCCGAACAGGTTTTCTTTTCTTGTATGGGAAAGGTGAAGAGAAGCACATTTTCCCTACCAAGAACAGATTCTAATTTATGTCAATGTCTAATGATTTTTATTCTATTTTCTTTCAGTTTCAATTAAAGCTAAATAAAGGGTGGTTGAGAAATTATTGGGTGTGTTGGTTTATTTTGGCTGACCGACCTCCCGCGACCATAGATATGTAGTCTTAGACTTAATTTCTTGGTTTCAATTGAAGGGGACGGTGATCATCTTTTTGAAGATCTGCCACAATATGACATCTAACGCTGATAATTTCTCACCACTCTTGGTTTATCTTTCGGTGCGTCTTTCATTATCCGTATCACCGTATGTTTCTTCTCATTTAACTAGAACAGTTGCCCAGTGTACCGCATTAATTACTTTGGACAAATCATCTTCAAATAGATGGCTGGTTGGCTTGCCTAGTCAGACAGAATGACAAATAAATGAATATTTTTACGATCCCATTTTATTTTATTATAAGGTTTTAGATTTTAATTGGTTTGGGCATTTAGATTTTTTTACCTGGTTAGAACTTAGAAATATGCTTTTATTTTAATTTTATTTGTATTCAAAGTTTGCGACTAACTCAGTTCATATTGTAACGTGTTTCATAGTTTGGCCGCTTCTTTGGTTTGGGTAGTGGGTTGTCTCTCATATTATTGTAATGAAACCATGAAACTATTAAACAAGAGAAGTGGAATTAAAAAAACGGAGAAAAAACAGAGGATTTTATATCGTTGAGCTCTTCGGAGTTGATGATTAGGAGGGGAGGGTGCTTACTTGTCTGAGTTTATTAGGGCTGGGGTTTTGAAACCTCGGTTTGTGTTTGTGTTTGTGTTTGGACTATGCAAAAGAATGGGTTCGTTAAGTCTAGTTGTATTTAATCTATGTTCGGATTGTGCAAAGAAATGAGTTTGTTAAGCTGGAAGTGGTGGTGTAAGTTATGCTGGGAGGAAGAAAGGGGTTGAGATGTGAATAATTTGAAAATTTATGCCTCGTTTGATAACTATTTGGTTTTTGAAAATTGTGATTGTTTACTCACAACTTCTCTACCATAGATTTCATCTTCTCTGCCATGGTTTCCATCTTCCTTAAAAAACATTGAGTTTCTAGCCAAATTCCAAACATAAAAACTAGTTTTTGAAAACTACTCTTTTTTTCAAAACTTGGCTTGGTAAACGTATGTTAAAAAGTAGATATGAAAATATGGAAACTCATAGAGGTAATAGTATTTATAGGCTTAATTTTCAAAAACCAATTGGTTATCAAATGGAGGCCTTATTTAATAATTATTTGATAGGTGAAAAATTAAAACGTAAACTACATTTTATTGAAATTTTCATTACAATTTACTTAATAAATTAGTGGGTGACATTATTGGGTAGTGAAGAAATACTTTTATAATTTACTAATCCAAATGGAATGCCTCCCAAAAGTAGTATCAACTATCAAGCTCATCCAATCCTGGAGGATTAAAAAATTGTGTGAAACGGGGAAAAAAGAACTGCAGAGAGACAATAGGGGATATGCAAACATGAGTTTCCAAATCTGTCTCCTGGTAATTAGATGAAAAACTATGGGGGCTAGTTCAGTAGTGTTGAACTTGTTAAAGTTGTAAACTGAACCTTCAGCCCAAAAATGGGGGGACAGACCTCTAGCTCAAGAGATTTGGGCTCTTACCAAAATCTCAATATATGGGTTCAAACTTGTTTGAACTAGTGTACTATCTTTTTATGTTTTATTTAGATATAAAGTCTTATCAAAATTCGTACAAAACAATGGGACTGGGACCTCATTCTTTTTGAACAAGTATGGAAAAAGTGTATCCATTTTTGGGTGATTCTTACATGTATATTTTTGGTTTTGGTTGTTTTGCCAGACGAGAAAGAGCATTCTGAGCTGCTTCAACTGCTGCGTAAAAGCCTGAAATAGTCTTGAAGACCTCTGCGGCAGGCCCACTTGTAAGTTGAAATGTCTTGTATTAATTGCTTTGGTACGAATGCCTTTCCTCTATTGTTGTCCTTTATTTGTCTTGCTGATTATAGCTGAACAATTGTATTATATTTTTGGATTTTGTACGATGGCTTTGTTCTTGCCTGTAGTAGCTGCTGTTTCATTAATTCTGCCTTGAATCAATCAGTTGGAGATTAATTGAAAAAGCTACGAGGCTATGTTAATAAATGCACATTGGGTTTAGGTGATTTGTCTCGACGAATTAAAAGGGGAAAAAAATCTCACAAGTCACAATGTTGATTCTCATTACTCTGCATATTTTTACCTCTCAAATGAATTTTGCTGGTACTACTTTGAGGAAAACCTAGGGTAAGATATTTAAAAAGTTGATCAAAAGATGCCAACAAGAGCTGACATTAAGTATGACTCATGATCAAGAGTTTGAATTCCCCCAACCCTAATTGTTGATGTACTAAAAAAACAAAGTTGATTAGATAACAC

mRNA sequence

TTTTTTTGGTTAATCAGAAGAAGCAGAATATAAAAACTCCAGTGTCATTTCCCCGTGCTTCTCCTTTGCTTTTGCCCCACGCTTTCACTCTCAATCTTCTTCGCAGAGGAAAGAACTCGAGCTCTTCTCTTGCTGCCTGAAGCGTCCTCTTCTCCGGTGTTCGTTTGTTTGAACTAAGAACTTGCAGTCGATACCATGGATGATCGGAAGGAGAAAACTGCCCCCTGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACAGGTGCCTGACTACTCTCTTGATTTCTCAAAAATTAGGGAAAATAGGAAACAAAACAAGAGAGACGTGTCTCGAGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCTCAGCCGCTCCCCCAACCACAACAGACTCTTTCCCCACTGAAAACCACCACCCCTATCATCAGAGTCACCATCCTCCACCAACGAGAAAGAGCATTCTGAGCTGCTTCAACTGCTGCGTAAAAGCCTGAAATAGTCTTGAAGACCTCTGCGGCAGGCCCACTTGTAAGTTGAAATGTCTTGTATTAATTGCTTTGGTACGAATGCCTTTCCTCTATTGTTGTCCTTTATTTGTCTTGCTGATTATAGCTGAACAATTGTATTATATTTTTGGATTTTGTACGATGGCTTTGTTCTTGCCTGTAGTAGCTGCTGTTTCATTAATTCTGCCTTGAATCAATCAGTTGGAGATTAATTGAAAAAGCTACGAGGCTATGTTAATAAATGCACATTGGGTTTAGGTGATTTGTCTCGACGAATTAAAAGGGGAAAAAAATCTCACAAGTCACAATGTTGATTCTCATTACTCTGCATATTTTTACCTCTCAAATGAATTTTGCTGGTACTACTTTGAGGAAAACCTAGGGTAAGATATTTAAAAAGTTGATCAAAAGATGCCAACAAGAGCTGACATTAAGTATGACTCATGATCAAGAGTTTGAATTCCCCCAACCCTAATTGTTGATGTACTAAAAAAACAAAGTTGATTAGATAACAC

Coding sequence (CDS)

ATGGATGATCGGAAGGAGAAAACTGCCCCCTGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACAGGTGCCTGACTACTCTCTTGATTTCTCAAAAATTAGGGAAAATAGGAAACAAAACAAGAGAGACGTGTCTCGAGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCTCAGCCGCTCCCCCAACCACAACAGACTCTTTCCCCACTGAAAACCACCACCCCTATCATCAGAGTCACCATCCTCCACCAACGAGAAAGAGCATTCTGAGCTGCTTCAACTGCTGCGTAAAAGCCTGA

Protein sequence

MDDRKEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCVKA
Homology
[Close]
BLAST of Tan0018684 vs. NCBI nr
Match: XP_022977957.1 (uncharacterized protein LOC111478092 [Cucurbita maxima])

HSP 1 Score: 211.1 bits (536), Expect = 4.6e-51
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  SAAPPTTTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCVKA 103
           SAAPPTTTDSFPT+NHHPYHQSHH PPTRKSILSCFNCC+KA
Sbjct: 61  SAAPPTTTDSFPTDNHHPYHQSHHSPPTRKSILSCFNCCLKA 102

[Close]
BLAST of Tan0018684 vs. NCBI nr
Match: XP_022133053.1 (uncharacterized protein LOC111005740 isoform X2 [Momordica charantia])

HSP 1 Score: 210.7 bits (535), Expect = 6.0e-51
Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 0 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKG +PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  SAAPPTTTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCVKA 103
           SA PPT TDSFPTENHHPYHQSHHPPPTRKSILSCFNCCVKA
Sbjct: 61  SATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCVKA 102

[Close]
BLAST of Tan0018684 vs. NCBI nr
Match: XP_023545041.1 (uncharacterized protein LOC111804467 [Cucurbita pepo subsp. pepo] >KAG6604236.1 hypothetical protein SDJN03_04845, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 210.3 bits (534), Expect = 7.8e-51
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  SAAPPTTTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCVKA 103
           SAAPPTTT+SFPT+NHHPYHQSHH PPTRKSILSCFNCCVKA
Sbjct: 61  SAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA 102

[Close]
BLAST of Tan0018684 vs. NCBI nr
Match: XP_038881128.1 (uncharacterized protein LOC120072730 [Benincasa hispida])

HSP 1 Score: 209.9 bits (533), Expect = 1.0e-50
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKR+VSRASLGNEEELI 
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKREVSRASLGNEEELIT 60

Query: 61  SAAPPTTTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCVKA 103
           SAAPPTTT+SFPT+NHHPYHQSHHPPPTRKSILSCFNCCVKA
Sbjct: 61  SAAPPTTTESFPTDNHHPYHQSHHPPPTRKSILSCFNCCVKA 102

[Close]
BLAST of Tan0018684 vs. NCBI nr
Match: XP_022950290.1 (uncharacterized protein LOC111453422 [Cucurbita moschata])

HSP 1 Score: 209.1 bits (531), Expect = 1.7e-50
Identity = 97/102 (95.10%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSKIRENRKQNKRD+SRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDMSRASLGNEEELIA 60

Query: 61  SAAPPTTTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCVKA 103
           SAAPPTTT+SFPT+NHHPYHQSHH PPTRKSILSCFNCCVKA
Sbjct: 61  SAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA 102

[Close]
BLAST of Tan0018684 vs. ExPASy TrEMBL
Match: A0A6J1IJV1 (uncharacterized protein LOC111478092 OS=Cucurbita maxima OX=3661 GN=LOC111478092 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.2e-51
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  SAAPPTTTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCVKA 103
           SAAPPTTTDSFPT+NHHPYHQSHH PPTRKSILSCFNCC+KA
Sbjct: 61  SAAPPTTTDSFPTDNHHPYHQSHHSPPTRKSILSCFNCCLKA 102

[Close]
BLAST of Tan0018684 vs. ExPASy TrEMBL
Match: A0A6J1BXX7 (uncharacterized protein LOC111005740 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005740 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.9e-51
Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 0 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKG +PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  SAAPPTTTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCVKA 103
           SA PPT TDSFPTENHHPYHQSHHPPPTRKSILSCFNCCVKA
Sbjct: 61  SATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCVKA 102

[Close]
BLAST of Tan0018684 vs. ExPASy TrEMBL
Match: A0A6J1GFA9 (uncharacterized protein LOC111453422 OS=Cucurbita moschata OX=3662 GN=LOC111453422 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 8.4e-51
Identity = 97/102 (95.10%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSKIRENRKQNKRD+SRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDMSRASLGNEEELIA 60

Query: 61  SAAPPTTTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCVKA 103
           SAAPPTTT+SFPT+NHHPYHQSHH PPTRKSILSCFNCCVKA
Sbjct: 61  SAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA 102

[Close]
BLAST of Tan0018684 vs. ExPASy TrEMBL
Match: A0A1S3B0G0 (uncharacterized protein LOC103484698 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484698 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.4e-50
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  SAAPPTTTDSFPTENHHPY-HQSHHPPPTRKSILSCFNCCVKA 103
            AAPPTTTDSFPT+NHHPY HQSHHPPPTRKSILSCFNCCVKA
Sbjct: 61  KAAPPTTTDSFPTDNHHPYHHQSHHPPPTRKSILSCFNCCVKA 103

[Close]
BLAST of Tan0018684 vs. ExPASy TrEMBL
Match: A0A0A0KJ83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487580 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.4e-50
Identity = 95/102 (93.14%), Postives = 100/102 (98.04%), Query Frame = 0 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  SAAPPTTTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCVKA 103
            AAPPTTTD+FPT+NHHPYHQ+HH PPTRKSILSCFNCCVKA
Sbjct: 61  KAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA 102

[Close]
BLAST of Tan0018684 vs. TAIR 10
Match: AT5G09960.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-31
Identity = 71/110 (64.55%), Postives = 78/110 (70.91%), Query Frame = 0 

Query: 2   DDRKEKTAPWLSVPQFGDWDQK--GQVPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI 61
           DDRKEK  PWLSVPQFGDWDQK  G +PDYS+DF+KIRE RKQNKRD SRASLGNEEELI
Sbjct: 3   DDRKEKNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASLGNEEELI 62

Query: 62  ASAAPPTTTDSFPT---ENHHPYHQSH----HPPPTRKSILSCFNCCVKA 103
                 T+T    T   EN   +  SH    H P TR+S+ SCFNCCVKA
Sbjct: 63  KPPESATSTAELTTVQSENQREFSPSHHHQPHSPSTRRSMFSCFNCCVKA 112

[Close]
BLAST of Tan0018684 vs. TAIR 10
Match: AT5G64850.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 120.6 bits (301), Expect = 7.6e-28
Identity = 68/114 (59.65%), Postives = 74/114 (64.91%), Query Frame = 0 

Query: 1   MDDRKE-KTAPWLSVPQFGDWDQKGQVPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI 60
           M+DRKE K +PWLSVPQFGDWDQKG   DYS+DFSKIRE RK NKRD SRASLGNEEELI
Sbjct: 1   MEDRKENKNSPWLSVPQFGDWDQKGGSIDYSMDFSKIREMRKLNKRDASRASLGNEEELI 60

Query: 61  ---------ASAAPPTTTDSFPTENHHPYHQSHHP--PPTRKSILSCFNCCVKA 103
                     +A P   T      N+      HHP  P  R+ I SCFNCCVKA
Sbjct: 61  NPFHDQPPVDTAKPKKLTTVHSDNNNRNEFSHHHPHSPSRRRRIFSCFNCCVKA 114

[Close]
BLAST of Tan0018684 vs. TAIR 10
Match: AT5G19473.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 78.2 bits (191), Expect = 4.3e-15
Identity = 44/106 (41.51%), Postives = 57/106 (53.77%), Query Frame = 0 

Query: 3   DRKEKTAPWLSVPQFGDWDQKG--QVPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 62
           D++ + A W  VPQFG WDQKG     +YS+ FSK R NRKQNK  V  +SLG+E+EL+ 
Sbjct: 2   DKRRENAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGVRHSSLGSEQELMV 61

Query: 63  SAAPPTTTDSFPTENHHPYHQSHH-----PPPTRKSILSCFNCCVK 102
           S             NH   H  H      P   +K IL+  NCC++
Sbjct: 62  SV----------RRNHQQLHHRHETQDDDPVMKKKRILTYINCCIR 97

The following BLAST results are available for this feature:
BLAST of Tan0018684 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0018684 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022977957.14.6e-5196.08uncharacterized protein LOC111478092 [Cucurbita maxima][more]
XP_022133053.16.0e-5196.08uncharacterized protein LOC111005740 isoform X2 [Momordica charantia][more]
XP_023545041.17.8e-5196.08uncharacterized protein LOC111804467 [Cucurbita pepo subsp. pepo] >KAG6604236.1 ... [more]
XP_038881128.11.0e-5094.12uncharacterized protein LOC120072730 [Benincasa hispida][more]
XP_022950290.11.7e-5095.10uncharacterized protein LOC111453422 [Cucurbita moschata][more]
BLAST of Tan0018684 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IJV12.2e-5196.08uncharacterized protein LOC111478092 OS=Cucurbita maxima OX=3661 GN=LOC111478092... [more]
A0A6J1BXX72.9e-5196.08uncharacterized protein LOC111005740 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1GFA98.4e-5195.10uncharacterized protein LOC111453422 OS=Cucurbita moschata OX=3662 GN=LOC1114534... [more]
A0A1S3B0G01.4e-5095.15uncharacterized protein LOC103484698 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0KJ832.4e-5093.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487580 PE=4 SV=1[more]
BLAST of Tan0018684 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G09960.11.1e-3164.55FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT5G64850.17.6e-2859.65FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT5G19473.14.3e-1541.51RPM1-interacting protein 4 (RIN4) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..75
NoneNo IPR availablePANTHERPTHR33882:SF10RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEINcoord: 1..91
NoneNo IPR availablePANTHERPTHR33882PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEINcoord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0018684.1Tan0018684.1mRNA
Tan0018684.2Tan0018684.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane