Tan0018683 (gene) Snake gourd v1

Overview


Name	Tan0018683
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Zinc finger, LIM-type
Location	LG10: 2354414 .. 2355595 (-)
RNA-Seq Expression	Tan0018683
Synteny	Tan0018683

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTCACAGGAACATTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAGTTGCTTTCCCTTGAAGGGAATCCTTACCACAAGTCTTGCTTCAAATGTAGCCATTGCAAAGGCACCCTCTCGGTACGTCTCGATCGAGTTTTCTTTCGTTTGTTTCGTATCATCGTGTTTGTTGTGACCGATTTGACCCGATCGAGTCGGTTTATTGTACAACAGATGAGTAGCTACTCATGGATGGATGGTGTCCTGTATTGCAAGACTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAACTTGTAATAATTTTCTTTTCCATCTCTTAATGTTTGTCCCCATTTTTTACCTATCTTTCTAACATTCTCTCATTTTCATTCTATTGAATGGCAACAGCCAAGCCTTCTGAGAAGCAAAATGATCTGGTATGCTCCCATTCTTTTCACTTTCCATATGCCTACAATGCTAATCTCCGATCCGGGACAATTCCAGAACTCGTTCGATTATGATTACGATTACGATTTGATTTAGATTTATTAGTAGTGTTTTAACACGATATATGAAAGCAGGAGATCCTCCTTAATTCCTTAATTACTTCATATATATATTATAGTCTACATATCTAGCCTAGTGCAATATACGCACATGACTCGGTAACTTTTGATATCTTCAGCAGTCGAGGGCTCCGAGCAAACTCTCCACCATGTTCTCTGGAACTCAGGACAAATGTGCAGCCTGCTCGAAAACGGTTTATCCGTTGGAGAAGGTCTCTATAGTTGTTCATTTTTGCACAAAATGTTAGTAGCTAGATTATGTTGGCTAATAATATTTGAAAATGAAAGTATGAAATTGTTGTGTTTGTGTTTTGTGTTTGGTTGATAAAAAGGTGACTCTTGAGGGGGAATGCTACCACAAGAACTGCTTTAGATGTGCTCATGGTGGGTGCCATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAACTCTTCATGATCAAAGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAATCCACCACGCCGCCTCCCGAACCAGCGGAGGAAGACGAGGCCGAAGCTCAGCCACAGGCCGAGGAAGCTGCCGTAGAGCAAACTTAA

mRNA sequence

ATGTCATTCACAGGAACATTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAGTTGCTTTCCCTTGAAGGGAATCCTTACCACAAGTCTTGCTTCAAATGTAGCCATTGCAAAGGCACCCTCTCGATGAGTAGCTACTCATGGATGGATGGTGTCCTGTATTGCAAGACTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAACTTCCAAGCCTTCTGAGAAGCAAAATGATCTGTCGAGGGCTCCGAGCAAACTCTCCACCATGTTCTCTGGAACTCAGGACAAATGTGCAGCCTGCTCGAAAACGGTTTATCCGTTGGAGAAGGTGACTCTTGAGGGGGAATGCTACCACAAGAACTGCTTTAGATGTGCTCATGGTGGGTGCCATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAACTCTTCATGATCAAAGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAATCCACCACGCCGCCTCCCGAACCAGCGGAGGAAGACGAGGCCGAAGCTCAGCCACAGGCCGAGGAAGCTGCCGTAGAGCAAACTTAA

Coding sequence (CDS)

ATGTCATTCACAGGAACATTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAGTTGCTTTCCCTTGAAGGGAATCCTTACCACAAGTCTTGCTTCAAATGTAGCCATTGCAAAGGCACCCTCTCGATGAGTAGCTACTCATGGATGGATGGTGTCCTGTATTGCAAGACTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAACTTCCAAGCCTTCTGAGAAGCAAAATGATCTGTCGAGGGCTCCGAGCAAACTCTCCACCATGTTCTCTGGAACTCAGGACAAATGTGCAGCCTGCTCGAAAACGGTTTATCCGTTGGAGAAGGTGACTCTTGAGGGGGAATGCTACCACAAGAACTGCTTTAGATGTGCTCATGGTGGGTGCCATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAACTCTTCATGATCAAAGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAATCCACCACGCCGCCTCCCGAACCAGCGGAGGAAGACGAGGCCGAAGCTCAGCCACAGGCCGAGGAAGCTGCCGTAGAGCAAACTTAA

Protein sequence

MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKTHFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKSTTPPPEPAEEDEAEAQPQAEEAAVEQT

Homology

[Close]

BLAST of Tan0018683 vs. ExPASy Swiss-Prot
Match: Q500W4 (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.1e-83
Identity = 146/202 (72.28%), Postives = 170/202 (84.16%), Query Frame = 0


Query: 2   SFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKTH 61
           +FTGT DKCKACDKTVYV++L++LEG PYHKSCF+CSHC GTL + +YS MDGVLYCKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLEKVTL 121
           FEQLFKESGNFSKNFQT+  +EK ND ++AP++LS+ FSGTQDKCAAC KTVYPLEK+T+
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122

Query: 122 EGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKST 181
           EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + +
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182

Query: 182 TPPPEPAEEDEAEAQPQAEEAA 204
           T   +  E  E EA P  EE +
Sbjct: 183 TAEEDKTEPKEDEANPTEEETS 204

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BLAST of Tan0018683 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.1e-81
Identity = 143/201 (71.14%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKC  CDKTVYVV++LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ  K   ++ +L+R PSK+S++F GTQDKCAAC KTVYPLEK+ 
Sbjct: 61  HFEQLFKESGNFSKNFQPGK--TEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQ 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKS 180
           +EGEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLFM KGNY HVL+AA ++++
Sbjct: 121 MEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRT 180

Query: 181 ---TTPPPEPAEEDEAEAQPQ 199
               T PPEP E+   EA+ +
Sbjct: 181 ASGNTLPPEPTEDVAVEAKEE 199

[Close]

BLAST of Tan0018683 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 4.9e-79
Identity = 141/207 (68.12%), Postives = 167/207 (80.68%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYV++LL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLEKVT 120
           HFEQLFKESGN+SKNFQ  K  +  + L+R PSKLS+ FSGTQDKCA C KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK- 180
           +EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN + 
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRR 180

Query: 181 -----STTPPPEPAEEDEAEAQPQAEE 202
                  +PP +  + D+  + P+A+E
Sbjct: 181 SASSGGASPPSDDHKPDDTASIPEAKE 207

[Close]

BLAST of Tan0018683 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.8e-71
Identity = 131/201 (65.17%), Postives = 153/201 (76.12%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGT DKC ACDKTV+ ++LL+ +G PYHK+CFKCSHCKG LSM SYS MDGVLYCKT
Sbjct: 1   MSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLEKVT 120
           HFEQLFKE+G+FSK F     S    +L+RAPSK+ + FSGTQDKCAAC KTVYPLEK+T
Sbjct: 61  HFEQLFKETGSFSKKFAPGCRS-TDKELARAPSKICSAFSGTQDKCAACQKTVYPLEKLT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVL-------- 180
           LEGE YHK+CF+C+HGGC LT SSYAAL+GVLYCK HF QLFM KG+YNH+         
Sbjct: 121 LEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSESQEV 180

Query: 181 --EAAANKKSTTPPPEPAEED 192
             E    ++   PPP+   ED
Sbjct: 181 LPEVVPEEQPAPPPPDENRED 200

[Close]

BLAST of Tan0018683 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 6.4e-71
Identity = 120/184 (65.22%), Postives = 157/184 (85.33%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGT  KC+AC+KTVY VELLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKP--SEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ +KP   +   +L+R PS+L+ MFSGTQDKCA C+KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAAN 180
           KVT+E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KKST 182
           K++T
Sbjct: 181 KRAT 184

[Close]

BLAST of Tan0018683 vs. NCBI nr
Match: XP_011650764.2 (LIM domain-containing protein PLIM2b isoform X2 [Cucumis sativus])

HSP 1 Score: 410.2 bits (1053), Expect = 1.0e-110
Identity = 198/209 (94.74%), Postives = 203/209 (97.13%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ +KPSEKQNDLSRAPSKLS+MFSGTQDKCAACSKTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLSRAPSKLSSMFSGTQDKCAACSKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKS 180
           LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK+
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180

Query: 181 TTPPPEPAEEDE--AEAQPQAEEAAVEQT 208
            TPPPEPAEE+E   EAQPQA+EA VEQT
Sbjct: 181 PTPPPEPAEEEEGATEAQPQADEAPVEQT 209

[Close]

BLAST of Tan0018683 vs. NCBI nr
Match: XP_008438078.1 (PREDICTED: LIM domain-containing protein PLIM2c-like [Cucumis melo])

HSP 1 Score: 407.1 bits (1045), Expect = 8.8e-110
Identity = 198/209 (94.74%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ +KPSEKQNDLSRAPSKLS+MFSGTQDKCAAC+KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKS 180
           LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK+
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180

Query: 181 TTPPPEPAEEDE--AEAQPQAEEAAVEQT 208
           TTPPPEPAEE+E   EAQPQA+E AVEQT
Sbjct: 181 TTPPPEPAEEEEGATEAQPQADE-AVEQT 208

[Close]

BLAST of Tan0018683 vs. NCBI nr
Match: XP_004134333.3 (LIM domain-containing protein PLIM2b isoform X1 [Cucumis sativus] >KAE8650257.1 hypothetical protein Csa_009827 [Cucumis sativus])

HSP 1 Score: 405.6 bits (1041), Expect = 2.6e-109
Identity = 198/210 (94.29%), Postives = 203/210 (96.67%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDL-SRAPSKLSTMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ +KPSEKQNDL SRAPSKLS+MFSGTQDKCAACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 STTPPPEPAEEDE--AEAQPQAEEAAVEQT 208
           + TPPPEPAEE+E   EAQPQA+EA VEQT
Sbjct: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 210

[Close]

BLAST of Tan0018683 vs. NCBI nr
Match: XP_038906229.1 (LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida])

HSP 1 Score: 404.1 bits (1037), Expect = 7.5e-109
Identity = 203/236 (86.02%), Postives = 206/236 (87.29%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLS--------------- 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLS               
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSVRFFFSLIRIMSFVM 60

Query: 61  ------------MSSYSWMDGVLYCKTHFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPS 120
                       MSSYSWMDGVLYCKTHFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPS
Sbjct: 61  ISIFDPSRWLRQMSSYSWMDGVLYCKTHFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPS 120

Query: 121 KLSTMFSGTQDKCAACSKTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLY 180
           KLS+MFSGTQDKCA CSKTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLY
Sbjct: 121 KLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLY 180

Query: 181 CKHHFAQLFMIKGNYNHVLEAAANKKSTTPPPEPAEEDE--AEAQPQAEEAAVEQT 208
           CKHHFAQLFMIKGNYNHVLEAAANKK+TTPPPEPAEE+E  AEAQPQAEEAAVEQT
Sbjct: 181 CKHHFAQLFMIKGNYNHVLEAAANKKATTPPPEPAEEEEGDAEAQPQAEEAAVEQT 236

[Close]

BLAST of Tan0018683 vs. NCBI nr
Match: XP_022975113.1 (LIM domain-containing protein PLIM2c-like [Cucurbita maxima])

HSP 1 Score: 403.7 bits (1036), Expect = 9.8e-109
Identity = 193/203 (95.07%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQTSKPSEKQND SRAP+K S MFSGTQDKCAACSKTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDSSRAPTKASAMFSGTQDKCAACSKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKS 180
           LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK+
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180

Query: 181 TTPPPEPAEEDEAEAQPQAEEAA 204
           TTPPPE AE+DE  AQPQAEE A
Sbjct: 181 TTPPPEAAEDDEGGAQPQAEEDA 203

[Close]

BLAST of Tan0018683 vs. ExPASy TrEMBL
Match: A0A0A0L4A1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122620 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.5e-110
Identity = 197/209 (94.26%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSC KCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCLKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ +KPSEKQNDLSRAPSKLS+MFSGTQDKCAACSKTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLSRAPSKLSSMFSGTQDKCAACSKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKS 180
           LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK+
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180

Query: 181 TTPPPEPAEEDE--AEAQPQAEEAAVEQT 208
            TPPPEPAEE+E   EAQPQA+EA VEQT
Sbjct: 181 PTPPPEPAEEEEGATEAQPQADEAPVEQT 209

[Close]

BLAST of Tan0018683 vs. ExPASy TrEMBL
Match: A0A1S3AW36 (LIM domain-containing protein PLIM2c-like OS=Cucumis melo OX=3656 GN=LOC103483293 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.3e-110
Identity = 198/209 (94.74%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ +KPSEKQNDLSRAPSKLS+MFSGTQDKCAAC+KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKS 180
           LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK+
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180

Query: 181 TTPPPEPAEEDE--AEAQPQAEEAAVEQT 208
           TTPPPEPAEE+E   EAQPQA+E AVEQT
Sbjct: 181 TTPPPEPAEEEEGATEAQPQADE-AVEQT 208

[Close]

BLAST of Tan0018683 vs. ExPASy TrEMBL
Match: A0A6J1IIB7 (LIM domain-containing protein PLIM2c-like OS=Cucurbita maxima OX=3661 GN=LOC111474084 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 4.7e-109
Identity = 193/203 (95.07%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQTSKPSEKQND SRAP+K S MFSGTQDKCAACSKTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDSSRAPTKASAMFSGTQDKCAACSKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKS 180
           LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK+
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180

Query: 181 TTPPPEPAEEDEAEAQPQAEEAA 204
           TTPPPE AE+DE  AQPQAEE A
Sbjct: 181 TTPPPEAAEDDEGGAQPQAEEDA 203

[Close]

BLAST of Tan0018683 vs. ExPASy TrEMBL
Match: A0A6J1F6K2 (LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC111441332 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.3e-108
Identity = 192/203 (94.58%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQTSKP EKQND SRAP+K S MFSGTQDKCAACSKTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPPEKQNDPSRAPTKASAMFSGTQDKCAACSKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKS 180
           LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK+
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180

Query: 181 TTPPPEPAEEDEAEAQPQAEEAA 204
           TTPPPE AE+DE  AQPQAEE A
Sbjct: 181 TTPPPEAAEDDEGGAQPQAEEDA 203

[Close]

BLAST of Tan0018683 vs. ExPASy TrEMBL
Match: A0A6J1IRA7 (LIM domain-containing protein PLIM2c-like OS=Cucurbita maxima OX=3661 GN=LOC111479786 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 8.3e-106
Identity = 192/208 (92.31%), Postives = 200/208 (96.15%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDL-SRAPSKLSTMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQTSKPSEKQND+ SRAPSKLS+MFSGTQDKC+ACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHK CFRCAHGGC+LTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 STTPPPEPAEEDEAE--AQPQAEEAAVE 206
           +TTPPPE AEEDEA+  A+ Q+EE AVE
Sbjct: 181 ATTPPPESAEEDEAKGNAEAQSEEGAVE 208

[Close]

BLAST of Tan0018683 vs. TAIR 10
Match: AT3G61230.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 310.8 bits (795), Expect = 8.0e-85
Identity = 146/202 (72.28%), Postives = 170/202 (84.16%), Query Frame = 0


Query: 2   SFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKTH 61
           +FTGT DKCKACDKTVYV++L++LEG PYHKSCF+CSHC GTL + +YS MDGVLYCKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLEKVTL 121
           FEQLFKESGNFSKNFQT+  +EK ND ++AP++LS+ FSGTQDKCAAC KTVYPLEK+T+
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122

Query: 122 EGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKST 181
           EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + +
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182

Query: 182 TPPPEPAEEDEAEAQPQAEEAA 204
           T   +  E  E EA P  EE +
Sbjct: 183 TAEEDKTEPKEDEANPTEEETS 204

[Close]

BLAST of Tan0018683 vs. TAIR 10
Match: AT1G01780.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 304.3 bits (778), Expect = 7.5e-83
Identity = 143/201 (71.14%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKC  CDKTVYVV++LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ  K   ++ +L+R PSK+S++F GTQDKCAAC KTVYPLEK+ 
Sbjct: 61  HFEQLFKESGNFSKNFQPGK--TEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQ 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKS 180
           +EGEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLFM KGNY HVL+AA ++++
Sbjct: 121 MEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRT 180

Query: 181 ---TTPPPEPAEEDEAEAQPQ 199
               T PPEP E+   EA+ +
Sbjct: 181 ASGNTLPPEPTEDVAVEAKEE 199

[Close]

BLAST of Tan0018683 vs. TAIR 10
Match: AT2G45800.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 295.4 bits (755), Expect = 3.5e-80
Identity = 141/207 (68.12%), Postives = 167/207 (80.68%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYV++LL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLEKVT 120
           HFEQLFKESGN+SKNFQ  K  +  + L+R PSKLS+ FSGTQDKCA C KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK- 180
           +EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN + 
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRR 180

Query: 181 -----STTPPPEPAEEDEAEAQPQAEE 202
                  +PP +  + D+  + P+A+E
Sbjct: 181 SASSGGASPPSDDHKPDDTASIPEAKE 207

[Close]

BLAST of Tan0018683 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 268.5 bits (685), Expect = 4.6e-72
Identity = 120/184 (65.22%), Postives = 157/184 (85.33%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGT  KC+AC+KTVY VELLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKP--SEKQNDLSRAPSKLSTMFSGTQDKCAACSKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ +KP   +   +L+R PS+L+ MFSGTQDKCA C+KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAAN 180
           KVT+E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KKST 182
           K++T
Sbjct: 181 KRAT 184

[Close]

BLAST of Tan0018683 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 265.0 bits (676), Expect = 5.0e-71
Identity = 120/182 (65.93%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGT  KCKAC+KTVY VELLS +G  YHKSCFKC+HCK  L +SSYS M+GVLYCK 
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKPSEKQN-DLSRAPSKLSTMFSGTQDKCAACSKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+ +K ++K   +L+R PS+++  FSGTQ+KCA CSKTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANK 180
           VT+E + YHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

The following BLAST results are available for this feature:

BLAST of Tan0018683 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q500W4	1.1e-83	72.28	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C P...	[more]
Q1ECF5	1.1e-81	71.14	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
O80839	4.9e-79	68.12	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
Q7F9R9	3.8e-71	65.17	LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
O04193	6.4e-71	65.22	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]

BLAST of Tan0018683 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650764.2	1.0e-110	94.74	LIM domain-containing protein PLIM2b isoform X2 [Cucumis sativus]	[more]
XP_008438078.1	8.8e-110	94.74	PREDICTED: LIM domain-containing protein PLIM2c-like [Cucumis melo]	[more]
XP_004134333.3	2.6e-109	94.29	LIM domain-containing protein PLIM2b isoform X1 [Cucumis sativus] >KAE8650257.1 ...	[more]
XP_038906229.1	7.5e-109	86.02	LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida]	[more]
XP_022975113.1	9.8e-109	95.07	LIM domain-containing protein PLIM2c-like [Cucurbita maxima]	[more]

BLAST of Tan0018683 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4A1	2.5e-110	94.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122620 PE=4 SV=1	[more]
A0A1S3AW36	4.3e-110	94.74	LIM domain-containing protein PLIM2c-like OS=Cucumis melo OX=3656 GN=LOC10348329...	[more]
A0A6J1IIB7	4.7e-109	95.07	LIM domain-containing protein PLIM2c-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1F6K2	2.3e-108	94.58	LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1IRA7	8.3e-106	92.31	LIM domain-containing protein PLIM2c-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Tan0018683 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61230.1	8.0e-85	72.28	GATA type zinc finger transcription factor family protein	[more]
AT1G01780.1	7.5e-83	71.14	GATA type zinc finger transcription factor family protein	[more]
AT2G45800.1	3.5e-80	68.12	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	4.6e-72	65.22	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	5.0e-71	65.93	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 105..157 e-value: 4.3E-13 score: 59.5 coord: 9..61 e-value: 1.1E-12 score: 58.2
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 10..65 e-value: 3.7E-13 score: 49.5 coord: 106..161 e-value: 9.3E-11 score: 41.8
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 104..164 score: 12.503799
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.4839
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 6..74 e-value: 3.6E-19 score: 70.7 coord: 100..170 e-value: 5.5E-19 score: 70.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..207
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..202
None	No IPR available	PANTHER	PTHR24206:SF69	LIM DOMAIN-CONTAINING PROTEIN PLIM2C	coord: 1..202
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 3..35
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 98..131
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 132..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0018683.1	Tan0018683.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding