Tan0018621 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCACAGATAAAATCAAATCAACCACAAACGCAAAGCACTGTAAATCCATACCAGAAAAATGCCGATTCCCTCGAAGATTGCTGCACTCGCCGCCGTCTACTCCTCTCTCGCCCTCATTTTCCTCGCCGGAGCCTCAAATGCGAGGGACCTGCGTCCATCGGAGCACGGCTTGGAGTACCAAAACCCTGGCGCTACTGAAAATTCCTCGCCGGATATGCAATCATTCTTCAAAGGAAACTCCTGGTCCTCCTCCGAGGTCGCGCTTCCGAAGGCGATGAACACCAGCCTGCCGTCGCAGTGGTGGAATCGCAGTCGCAGCCACGGCAACCGCTCTGGAGCCGCTGGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCGAGTTTGGTATGTGGAATTATAGGCGCTTCTTTGCTGATTGCTTCTGCTTTTATTTACATCTTCAAGTTCAGGAAGCAGAATATTAGATCGTCGTCCTCGCTCTCTGTCGCTGAAACTGCTAACATTATCGTTAACAAGTGATTTGAACACGGAATTGCATGTACATAGCTCTGAGATCTGGTCGCTGATCTTATTTTTGTGAGAGATTCATCTCTTTTTCTCTGATTTTTCCTCTGATATGTTTGAATTGAATTGAGTTCCTGTACTACTAGTGTAATATTAGATCTTCAGATACTCTAATAGATTGTTGCCAATTTCAGATTCATATAGAG CTCACAGATAAAATCAAATCAACCACAAACGCAAAGCACTGTAAATCCATACCAGAAAAATGCCGATTCCCTCGAAGATTGCTGCACTCGCCGCCGTCTACTCCTCTCTCGCCCTCATTTTCCTCGCCGGAGCCTCAAATGCGAGGGACCTGCGTCCATCGGAGCACGGCTTGGAGTACCAAAACCCTGGCGCTACTGAAAATTCCTCGCCGGATATGCAATCATTCTTCAAAGGAAACTCCTGGTCCTCCTCCGAGGTCGCGCTTCCGAAGGCGATGAACACCAGCCTGCCGTCGCAGTGGTGGAATCGCAGTCGCAGCCACGGCAACCGCTCTGGAGCCGCTGGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCGAGTTTGGTATGTGGAATTATAGGCGCTTCTTTGCTGATTGCTTCTGCTTTTATTTACATCTTCAAGTTCAGGAAGCAGAATATTAGATCGTCGTCCTCGCTCTCTGTCGCTGAAACTGCTAACATTATCGTTAACAAGTGATTTGAACACGGAATTGCATGTACATAGCTCTGAGATCTGGTCGCTGATCTTATTTTTGTGAGAGATTCATCTCTTTTTCTCTGATTTTTCCTCTGATATGTTTGAATTGAATTGAGTTCCTGTACTACTAGTGTAATATTAGATCTTCAGATACTCTAATAGATTGTTGCCAATTTCAGATTCATATAGAG ATGCCGATTCCCTCGAAGATTGCTGCACTCGCCGCCGTCTACTCCTCTCTCGCCCTCATTTTCCTCGCCGGAGCCTCAAATGCGAGGGACCTGCGTCCATCGGAGCACGGCTTGGAGTACCAAAACCCTGGCGCTACTGAAAATTCCTCGCCGGATATGCAATCATTCTTCAAAGGAAACTCCTGGTCCTCCTCCGAGGTCGCGCTTCCGAAGGCGATGAACACCAGCCTGCCGTCGCAGTGGTGGAATCGCAGTCGCAGCCACGGCAACCGCTCTGGAGCCGCTGGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCGAGTTTGGTATGTGGAATTATAGGCGCTTCTTTGCTGATTGCTTCTGCTTTTATTTACATCTTCAAGTTCAGGAAGCAGAATATTAGATCGTCGTCCTCGCTCTCTGTCGCTGAAACTGCTAACATTATCGTTAACAAGTGA MPIPSKIAALAAVYSSLALIFLAGASNARDLRPSEHGLEYQNPGATENSSPDMQSFFKGNSWSSSEVALPKAMNTSLPSQWWNRSRSHGNRSGAAGGDHIRGALLVASLVCGIIGASLLIASAFIYIFKFRKQNIRSSSSLSVAETANIIVNK Homology
BLAST of Tan0018621 vs. NCBI nr
Match: XP_023519911.1 (uncharacterized protein LOC111783236 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 240.7 bits (613), Expect = 8.1e-60 Identity = 132/157 (84.08%), Postives = 141/157 (89.81%), Query Frame = 0
BLAST of Tan0018621 vs. NCBI nr
Match: KAG6583852.1 (hypothetical protein SDJN03_19784, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019473.1 hypothetical protein SDJN02_18434, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 240.0 bits (611), Expect = 1.4e-59 Identity = 132/157 (84.08%), Postives = 141/157 (89.81%), Query Frame = 0
BLAST of Tan0018621 vs. NCBI nr
Match: XP_022927447.1 (uncharacterized protein LOC111434271 [Cucurbita moschata]) HSP 1 Score: 239.6 bits (610), Expect = 1.8e-59 Identity = 131/157 (83.44%), Postives = 141/157 (89.81%), Query Frame = 0
BLAST of Tan0018621 vs. NCBI nr
Match: XP_023000949.1 (uncharacterized protein LOC111495232 [Cucurbita maxima]) HSP 1 Score: 233.4 bits (594), Expect = 1.3e-57 Identity = 129/155 (83.23%), Postives = 137/155 (88.39%), Query Frame = 0
BLAST of Tan0018621 vs. NCBI nr
Match: XP_038895122.1 (uncharacterized protein LOC120083432 [Benincasa hispida]) HSP 1 Score: 230.7 bits (587), Expect = 8.4e-57 Identity = 129/155 (83.23%), Postives = 136/155 (87.74%), Query Frame = 0
BLAST of Tan0018621 vs. ExPASy TrEMBL
Match: A0A6J1EH69 (uncharacterized protein LOC111434271 OS=Cucurbita moschata OX=3662 GN=LOC111434271 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 8.7e-60 Identity = 131/157 (83.44%), Postives = 141/157 (89.81%), Query Frame = 0
BLAST of Tan0018621 vs. ExPASy TrEMBL
Match: A0A6J1KLE3 (uncharacterized protein LOC111495232 OS=Cucurbita maxima OX=3661 GN=LOC111495232 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 6.2e-58 Identity = 129/155 (83.23%), Postives = 137/155 (88.39%), Query Frame = 0
BLAST of Tan0018621 vs. ExPASy TrEMBL
Match: A0A6J1GT11 (uncharacterized protein LOC111456713 OS=Cucurbita moschata OX=3662 GN=LOC111456713 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 3.8e-55 Identity = 123/153 (80.39%), Postives = 132/153 (86.27%), Query Frame = 0
BLAST of Tan0018621 vs. ExPASy TrEMBL
Match: A0A6J1K0B3 (uncharacterized protein LOC111489933 OS=Cucurbita maxima OX=3661 GN=LOC111489933 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.6e-50 Identity = 116/153 (75.82%), Postives = 129/153 (84.31%), Query Frame = 0
BLAST of Tan0018621 vs. ExPASy TrEMBL
Match: A0A5D3C2L6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00520 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.8e-50 Identity = 119/155 (76.77%), Postives = 128/155 (82.58%), Query Frame = 0
BLAST of Tan0018621 vs. TAIR 10
Match: AT4G21740.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30515.1); Has 20 Blast hits to 20 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 2.2e-10 Identity = 49/131 (37.40%), Postives = 66/131 (50.38%), Query Frame = 0
BLAST of Tan0018621 vs. TAIR 10
Match: AT1G30515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21740.1); Has 20 Blast hits to 20 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 3.2e-06 Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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