Tan0018583 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCAAAATTCCCAAAGAAACAGAACACTCAAAACAGAGCAACAGAATAAAAAAAAATGAGTTCGTCAAGAAGAGCTTGGGTTGTAGTGGCGACTGTTGGAGTGGTGGAGGCCTTAAAAGATCAAGGGATTTGCCGGTGGAATCATACAATTAAATCGGTTCAACAGTACGCCAAAAACCATCTTCGATCTGTTTCGCAGGCGAAGAAGCTTTCTTCTCCGTCGGCGGCGGCGGTTTCCGATCAGAATTGGAAGCAGTCGGAGGAATCTTTGAGAACTGTCATGTACTTGAACTGTTGGGGTCCCAATAATTGACCCACATCGACTGCGATTCGAGCGAGACAATAGTTTTTAAGCACTAAACAAAGTTTTAGCGTTAGTGCTTTAGTGCTTAGTACTTGTAAATATATCCATCTCGATCTAATAGAAGAGCTTTTTGATGAGA ATCAAAATTCCCAAAGAAACAGAACACTCAAAACAGAGCAACAGAATAAAAAAAAATGAGTTCGTCAAGAAGAGCTTGGGTTGTAGTGGCGACTGTTGGAGTGGTGGAGGCCTTAAAAGATCAAGGGATTTGCCGGTGGAATCATACAATTAAATCGGTTCAACAGTACGCCAAAAACCATCTTCGATCTGTTTCGCAGGCGAAGAAGCTTTCTTCTCCGTCGGCGGCGGCGGTTTCCGATCAGAATTGGAAGCAGTCGGAGGAATCTTTGAGAACTGTCATGTACTTGAACTGTTGGGGTCCCAATAATTGACCCACATCGACTGCGATTCGAGCGAGACAATAGTTTTTAAGCACTAAACAAAGTTTTAGCGTTAGTGCTTTAGTGCTTAGTACTTGTAAATATATCCATCTCGATCTAATAGAAGAGCTTTTTGATGAGA ATGAGTTCGTCAAGAAGAGCTTGGGTTGTAGTGGCGACTGTTGGAGTGGTGGAGGCCTTAAAAGATCAAGGGATTTGCCGGTGGAATCATACAATTAAATCGGTTCAACAGTACGCCAAAAACCATCTTCGATCTGTTTCGCAGGCGAAGAAGCTTTCTTCTCCGTCGGCGGCGGCGGTTTCCGATCAGAATTGGAAGCAGTCGGAGGAATCTTTGAGAACTGTCATGTACTTGAACTGTTGGGGTCCCAATAATTGA MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN Homology
BLAST of Tan0018583 vs. NCBI nr
Match: XP_023554652.1 (uncharacterized protein LOC111811840 [Cucurbita pepo subsp. pepo] >KAG6572338.1 hypothetical protein SDJN03_29066, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011949.1 hypothetical protein SDJN02_26857, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 163.3 bits (412), Expect = 9.1e-37 Identity = 78/85 (91.76%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of Tan0018583 vs. NCBI nr
Match: XP_022952158.1 (uncharacterized protein LOC111454919 [Cucurbita moschata]) HSP 1 Score: 161.4 bits (407), Expect = 3.5e-36 Identity = 77/85 (90.59%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of Tan0018583 vs. NCBI nr
Match: XP_022969311.1 (uncharacterized protein LOC111468355 [Cucurbita maxima]) HSP 1 Score: 160.2 bits (404), Expect = 7.7e-36 Identity = 77/85 (90.59%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of Tan0018583 vs. NCBI nr
Match: XP_038888492.1 (uncharacterized protein LOC120078325 [Benincasa hispida]) HSP 1 Score: 158.3 bits (399), Expect = 2.9e-35 Identity = 75/85 (88.24%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of Tan0018583 vs. NCBI nr
Match: KAA0031602.1 (uncharacterized protein E6C27_scaffold139G003700 [Cucumis melo var. makuwa] >TYK07054.1 uncharacterized protein E5676_scaffold13G003720 [Cucumis melo var. makuwa]) HSP 1 Score: 156.0 bits (393), Expect = 1.5e-34 Identity = 73/85 (85.88%), Postives = 80/85 (94.12%), Query Frame = 0
BLAST of Tan0018583 vs. ExPASy TrEMBL
Match: A0A6J1GJQ8 (uncharacterized protein LOC111454919 OS=Cucurbita moschata OX=3662 GN=LOC111454919 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.7e-36 Identity = 77/85 (90.59%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of Tan0018583 vs. ExPASy TrEMBL
Match: A0A6J1HXF9 (uncharacterized protein LOC111468355 OS=Cucurbita maxima OX=3661 GN=LOC111468355 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 3.7e-36 Identity = 77/85 (90.59%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of Tan0018583 vs. ExPASy TrEMBL
Match: A0A5D3C714 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003720 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 7.0e-35 Identity = 73/85 (85.88%), Postives = 80/85 (94.12%), Query Frame = 0
BLAST of Tan0018583 vs. ExPASy TrEMBL
Match: A0A1S3C0Q4 (uncharacterized protein LOC103495542 OS=Cucumis melo OX=3656 GN=LOC103495542 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.0e-34 Identity = 72/85 (84.71%), Postives = 79/85 (92.94%), Query Frame = 0
BLAST of Tan0018583 vs. ExPASy TrEMBL
Match: A0A0A0K3P5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046670 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.0e-33 Identity = 71/85 (83.53%), Postives = 78/85 (91.76%), Query Frame = 0
BLAST of Tan0018583 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein ) HSP 1 Score: 105.5 bits (262), Expect = 2.1e-23 Identity = 53/85 (62.35%), Postives = 67/85 (78.82%), Query Frame = 0
BLAST of Tan0018583 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein ) HSP 1 Score: 100.9 bits (250), Expect = 5.2e-22 Identity = 49/90 (54.44%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of Tan0018583 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein ) HSP 1 Score: 48.5 bits (114), Expect = 3.0e-06 Identity = 27/88 (30.68%), Postives = 47/88 (53.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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