Tan0018512 (gene) Snake gourd v1

Overview
NameTan0018512
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
LocationLG09: 62798005 .. 62799959 (+)
RNA-Seq ExpressionTan0018512
SyntenyTan0018512
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACAGCCATACATCAGTGACCATCCATTCCAGTCCAGTTTCTAACAACCCATCTCCACCTAAACTCCTTTACAATTCTTGAAGCTTCTCCGGCCATGGCACTCTCCATTTCTTCCACTGCGCTCTCGACCCTCCCACTCAGGTAAACGCCAGAATTACAGTTTCTTTCATTTGTTTCTCCCAATTCTTCAGTCTCAATTTTCTGTTTGGCAACAGAGAATCATCCCACAAACCTCATAACTTTCCGGGAAAATTTCCAAAGTACAATCTCCGGCGAGATTCTTCTCATCTGAACGCCGCTAAGTCCGGCGTGTCCAGCGTCTGTGAACCGCTCCCTCCCGATCGACCCCTCTGGTTCCCCGGCAGCAGCCCCCCTGAGTGGCTCGACGGCAGGTAAATTATAACTTCGTCACTCGTTCCTTCTTCTACTTCCATCTGTAGAAGATTGATGAATGCTTAACGGTGTTTTGTTTCTCTGTCGCTTCCCAGCCTTCCCGGCGATTTTGGCTTCGATCCGCTTGGATTGGGTATGATTCTCTCTCTCTGTTTCTCTTTGAGCAGGGCCAATTTCGTACCTCAATTTTAGATTTATGTTCAATCTCATTTGGCCCATTCGATAACCATCGAATTTTTATTATCATTTTTCATCTTTCCTACCATGATTCTTATATTTTTATATTTAATTTAAAAAAAATGCGAGAATAGAAAGGTTGTTTATTAAACACAAAATCAAGAGTCTACAAATTTTTTTAAATGAGAAGTTTCTGTGACCCAAAAATTCCATACTCTGTCGATGGCTGCTGTCGTCAGGCTCCGACCCAGAGCTACTAAAATGGTTCGCACAAGCGGAGCTAATGCACGCGAGATGGGCAATGCTAGCAGTGGCCGGAATCCTGTTACCGGAATGGTTCGAAAGCTTGGGACTCATACAGAATTTCTCCTGGTACGACGCCGGAACGCGAGAGTATTTTGCAGACCCGACGACGTTGCTGGTAGCGCAACTGGCTCTGATGGGGTGGGTGGAGGGGCGGCGGTGGGCGGACCTGGTCAACCCGGGCAGTGTGGACGTGGACCTCAAACTGCCCCACAAGAAGAAGCCAAAGCCCGACGTGGGCTACCCGGGCGGATTCTGGTTCGACCCGATGATGTGGGGGAGAGGGTCGCCGGAGCCGGTGATGGTGCTGCGGACTAAGGAGATTAAGAATGGGCGGTTGGCGATGTTGGCGTTTGTTGGACTGTGGTTTCAGGCTATTTATACCGGCCAAGGCCCGCTTGAAAATCTCGCCGCCCACGTTGCAGATCCCGGCCACTGCAACATTTTTTCGGTAACAAACAATGCTATAGATTATTATCCAAGAGAGTTTTTTTTTCCTTTTTTTTTGCACCGATGAAAAATATTTTTCTACTGATGAGTGAGCACGGCAATTAATTCTTTTGACAAGTAATAAAGACTACAAGAGAGGAAAAATTACTCGAAAAAAATGAGGTTTTTGTTTTTAATTGAAAAAAAAATGAGTTTTTTTAGTACATTAACCTTTGTCACTAAAATTACCTCTTTTTGTATCCAATATTATTAGGGACTATATGTTTTTCTAATAGAATTTTTTTGTTATTTGGCAGGCGTTCAGGTCGGGTTGAGTTGACATTTTTGGCCCCATAGTCAAAACACTTAATTTCCCCACCTTGAAAAAAATGGTGTATGTCTTGATTTGTGTTGATAGATTTGTCCGGAACATGTATATTCACCCTACTTCAATTTAAGGAAGATTAATAATTTTCAATACATGGTTGTGTTGTAACATATTTGATGAGGCGAACATGTCTAATACTAAAGTAACATAAAAGTGTATGACATATAGGGGTGTTTGGATCGCAGAGTTGGGTTGAGTTGTACATAGTTGTTTTGTCAGTGAGTTCGGAAATCGGTGTTTGGTTTGAGAGTTGAGTTATTATGTC

mRNA sequence

CACAGCCATACATCAGTGACCATCCATTCCAGTCCAGTTTCTAACAACCCATCTCCACCTAAACTCCTTTACAATTCTTGAAGCTTCTCCGGCCATGGCACTCTCCATTTCTTCCACTGCGCTCTCGACCCTCCCACTCAGAGAATCATCCCACAAACCTCATAACTTTCCGGGAAAATTTCCAAAGTACAATCTCCGGCGAGATTCTTCTCATCTGAACGCCGCTAAGTCCGGCGTGTCCAGCGTCTGTGAACCGCTCCCTCCCGATCGACCCCTCTGGTTCCCCGGCAGCAGCCCCCCTGAGTGGCTCGACGGCAGCCTTCCCGGCGATTTTGGCTTCGATCCGCTTGGATTGGGCTCCGACCCAGAGCTACTAAAATGGTTCGCACAAGCGGAGCTAATGCACGCGAGATGGGCAATGCTAGCAGTGGCCGGAATCCTGTTACCGGAATGGTTCGAAAGCTTGGGACTCATACAGAATTTCTCCTGGTACGACGCCGGAACGCGAGAGTATTTTGCAGACCCGACGACGTTGCTGGTAGCGCAACTGGCTCTGATGGGGTGGGTGGAGGGGCGGCGGTGGGCGGACCTGGTCAACCCGGGCAGTGTGGACGTGGACCTCAAACTGCCCCACAAGAAGAAGCCAAAGCCCGACGTGGGCTACCCGGGCGGATTCTGGTTCGACCCGATGATGTGGGGGAGAGGGTCGCCGGAGCCGGTGATGGTGCTGCGGACTAAGGAGATTAAGAATGGGCGGTTGGCGATGTTGGCGTTTGTTGGACTGTGGTTTCAGGCTATTTATACCGGCCAAGGCCCGCTTGAAAATCTCGCCGCCCACGTTGCAGATCCCGGCCACTGCAACATTTTTTCGGCGTTCAGGTCGGGTTGAGTTGACATTTTTGGCCCCATAGTCAAAACACTTAATTTCCCCACCTTGAAAAAAATGGTGTATGTCTTGATTTGTGTTGATAGATTTGTCCGGAACATGTATATTCACCCTACTTCAATTTAAGGAAGATTAATAATTTTCAATACATGGTTGTGTTGTAACATATTTGATGAGGCGAACATGTCTAATACTAAAGTAACATAAAAGTGTATGACATATAGGGGTGTTTGGATCGCAGAGTTGGGTTGAGTTGTACATAGTTGTTTTGTCAGTGAGTTCGGAAATCGGTGTTTGGTTTGAGAGTTGAGTTATTATGTC

Coding sequence (CDS)

ATGGCACTCTCCATTTCTTCCACTGCGCTCTCGACCCTCCCACTCAGAGAATCATCCCACAAACCTCATAACTTTCCGGGAAAATTTCCAAAGTACAATCTCCGGCGAGATTCTTCTCATCTGAACGCCGCTAAGTCCGGCGTGTCCAGCGTCTGTGAACCGCTCCCTCCCGATCGACCCCTCTGGTTCCCCGGCAGCAGCCCCCCTGAGTGGCTCGACGGCAGCCTTCCCGGCGATTTTGGCTTCGATCCGCTTGGATTGGGCTCCGACCCAGAGCTACTAAAATGGTTCGCACAAGCGGAGCTAATGCACGCGAGATGGGCAATGCTAGCAGTGGCCGGAATCCTGTTACCGGAATGGTTCGAAAGCTTGGGACTCATACAGAATTTCTCCTGGTACGACGCCGGAACGCGAGAGTATTTTGCAGACCCGACGACGTTGCTGGTAGCGCAACTGGCTCTGATGGGGTGGGTGGAGGGGCGGCGGTGGGCGGACCTGGTCAACCCGGGCAGTGTGGACGTGGACCTCAAACTGCCCCACAAGAAGAAGCCAAAGCCCGACGTGGGCTACCCGGGCGGATTCTGGTTCGACCCGATGATGTGGGGGAGAGGGTCGCCGGAGCCGGTGATGGTGCTGCGGACTAAGGAGATTAAGAATGGGCGGTTGGCGATGTTGGCGTTTGTTGGACTGTGGTTTCAGGCTATTTATACCGGCCAAGGCCCGCTTGAAAATCTCGCCGCCCACGTTGCAGATCCCGGCCACTGCAACATTTTTTCGGCGTTCAGGTCGGGTTGA

Protein sequence

MALSISSTALSTLPLRESSHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG
Homology
[Close]
BLAST of Tan0018512 vs. ExPASy Swiss-Prot
Match: Q8LCQ4 (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA6 PE=1 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 4.3e-112
Identity = 191/269 (71.00%), Postives = 211/269 (78.44%), Query Frame = 0 

Query: 1   MALSISSTALSTLPLRES------SHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEP 60
           MA +I+S   STL L  S        +PH          L R+   +  A   VSSVCEP
Sbjct: 1   MAFAIASALTSTLTLSTSRVQNPTQRRPHVASTSSTGGRLMRERLVVVRAGKEVSSVCEP 60

Query: 61  LPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAG 120
           LPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDP+ LKWFAQAEL+H+RWAMLAV G
Sbjct: 61  LPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTG 120

Query: 121 ILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDV 180
           I++PE  E LG I+NFSWYDAG+REYFAD TTL VAQ+ LMGW EGRRWADL+ PGSVD+
Sbjct: 121 IIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDI 180

Query: 181 DLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQA 240
           + K PHK  PKPDVGYPGG WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAF+G  FQA
Sbjct: 181 EPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQA 240

Query: 241 IYTGQGPLENLAAHVADPGHCNIFSAFRS 264
            YT Q P+ENL AH+ADPGHCN+FSAF S
Sbjct: 241 TYTSQDPIENLMAHLADPGHCNVFSAFTS 269

[Close]
BLAST of Tan0018512 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 4.0e-86
Identity = 139/205 (67.80%), Postives = 161/205 (78.54%), Query Frame = 0 

Query: 57  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 116
           PDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPE LKW AQAEL+H+RWAML  AGI 
Sbjct: 63  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIF 122

Query: 117 LPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDL 176
           +PE+   +G++   SWY AG +EYF D TTL V +L L+GW EGRRWAD++ PG V+ D 
Sbjct: 123 IPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDP 182

Query: 177 KLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 236
             P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IY
Sbjct: 183 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIY 242

Query: 237 TGQGPLENLAAHVADPGHCNIFSAF 262
           TG GP++NL AH+ADPGH  IF+AF
Sbjct: 243 TGTGPIDNLFAHLADPGHATIFAAF 267

[Close]
BLAST of Tan0018512 vs. ExPASy Swiss-Prot
Match: P10708 (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB7 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.3e-84
Identity = 136/213 (63.85%), Postives = 160/213 (75.12%), Query Frame = 0 

Query: 49  SSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWA 108
           ++VC    PDRPLWFPGS+PP WLDGSLPGDFGFDPLGL SDPE L+W  QAEL+H RWA
Sbjct: 55  TTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWA 114

Query: 109 MLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVN 168
           ML  AGI +PE    +G++   SWY AG +EYF D TTL + +L L+GW EGRRWAD++ 
Sbjct: 115 MLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIK 174

Query: 169 PGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFV 228
           PG V+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +
Sbjct: 175 PGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVM 234

Query: 229 GLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF 262
           G WFQ IYTG GP++NL AH+ADPGH  IF+AF
Sbjct: 235 GAWFQHIYTGTGPIDNLFAHLADPGHATIFAAF 267

[Close]
BLAST of Tan0018512 vs. ExPASy Swiss-Prot
Match: Q9SYW8 (Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA2 PE=1 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.3e-84
Identity = 135/205 (65.85%), Postives = 159/205 (77.56%), Query Frame = 0 

Query: 57  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 116
           PDRP+WFPGS+PPEWLDGSLPGDFGFDPLGL SDP+ LKW  QAE++H RWAML  AGI 
Sbjct: 50  PDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIF 109

Query: 117 LPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDL 176
           +PE+   +G++   SWY AG +EYF D TTL V +L L+GW EGRRWAD++ PGSV+ D 
Sbjct: 110 IPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDP 169

Query: 177 KLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 236
             P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IY
Sbjct: 170 VFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIY 229

Query: 237 TGQGPLENLAAHVADPGHCNIFSAF 262
           TG GP++NL AH+ADPGH  IF+AF
Sbjct: 230 TGTGPIDNLFAHLADPGHATIFAAF 254

[Close]
BLAST of Tan0018512 vs. ExPASy Swiss-Prot
Match: P27521 (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA4 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.4e-54
Identity = 116/255 (45.49%), Postives = 148/255 (58.04%), Query Frame = 0 

Query: 7   STALSTLPLRESSHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGS 66
           +T  S    R  + KP    G   + N  RD S  +   S  +S  + +   +  W PG 
Sbjct: 5   TTHASASIFRPCTSKPRFLTGSSGRLN--RDLSFTSIGSSAKTSSFK-VEAKKGEWLPGL 64

Query: 67  SPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGL 126
           + P++L GSL GD GFDPLGL  DPE LKWF QAEL++ RWAML VAG+LLPE F  +G+
Sbjct: 65  ASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 124

Query: 127 IQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKP 186
           I    WYDAG  +YFA  +TL V +  L  +VE RRW D+ NPGSV+ D        PK 
Sbjct: 125 INVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKG 184

Query: 187 DVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLA 246
           +VGYPGG  F+P+ +      P    + KE+ NGRLAMLAF+G   Q   TG+GP ENL 
Sbjct: 185 EVGYPGGI-FNPLNFA-----PTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLL 244

Query: 247 AHVADPGHCNIFSAF 262
            H++DP H  I   F
Sbjct: 245 QHLSDPWHNTIVQTF 250

[Close]
BLAST of Tan0018512 vs. NCBI nr
Match: XP_022929243.1 (photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 542.0 bits (1395), Expect = 2.9e-150
Identity = 254/267 (95.13%), Postives = 258/267 (96.63%), Query Frame = 0 

Query: 1   MALSISSTALSTLPLRESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPP 60
           MALSISSTALSTLP+RESSH  H   NFPGKFPKYNLRR S+HLNAAKSGVSSVCEPLPP
Sbjct: 1   MALSISSTALSTLPIRESSHSHHRALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPP 60

Query: 61  DRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120
           DRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL
Sbjct: 61  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120

Query: 121 PEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLK 180
           PEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPGSVDVDLK
Sbjct: 121 PEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK 180

Query: 181 LPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240
           LPHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT
Sbjct: 181 LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240

Query: 241 GQGPLENLAAHVADPGHCNIFSAFRSG 265
           GQGPLENLAAHVADPGHCNIFSAF SG
Sbjct: 241 GQGPLENLAAHVADPGHCNIFSAFSSG 267

[Close]
BLAST of Tan0018512 vs. NCBI nr
Match: KAG6588096.1 (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 540.0 bits (1390), Expect = 1.1e-149
Identity = 253/267 (94.76%), Postives = 257/267 (96.25%), Query Frame = 0 

Query: 1   MALSISSTALSTLPLRESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPP 60
           MALSISSTALSTLP+RESSH  H   NFPGKFPKYNLRR S+HLNAAKSGVSSVCEPLPP
Sbjct: 1   MALSISSTALSTLPIRESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPP 60

Query: 61  DRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120
           DRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL
Sbjct: 61  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120

Query: 121 PEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLK 180
           PEWFESLGLI NFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPGSVDVDLK
Sbjct: 121 PEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK 180

Query: 181 LPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240
           LPHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT
Sbjct: 181 LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240

Query: 241 GQGPLENLAAHVADPGHCNIFSAFRSG 265
           GQGPLENLAAHVADPGHCNIFSAF SG
Sbjct: 241 GQGPLENLAAHVADPGHCNIFSAFSSG 267

[Close]
BLAST of Tan0018512 vs. NCBI nr
Match: XP_022929235.1 (photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 537.3 bits (1383), Expect = 7.2e-149
Identity = 254/268 (94.78%), Postives = 258/268 (96.27%), Query Frame = 0 

Query: 1   MALSISSTALSTLPL-RESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLP 60
           MALSISSTALSTLP+ RESSH  H   NFPGKFPKYNLRR S+HLNAAKSGVSSVCEPLP
Sbjct: 1   MALSISSTALSTLPISRESSHSHHRALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLP 60

Query: 61  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 120
           PDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL
Sbjct: 61  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 120

Query: 121 LPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDL 180
           LPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPGSVDVDL
Sbjct: 121 LPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDL 180

Query: 181 KLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 240
           KLPHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY
Sbjct: 181 KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 240

Query: 241 TGQGPLENLAAHVADPGHCNIFSAFRSG 265
           TGQGPLENLAAHVADPGHCNIFSAF SG
Sbjct: 241 TGQGPLENLAAHVADPGHCNIFSAFSSG 268

[Close]
BLAST of Tan0018512 vs. NCBI nr
Match: KAG7021985.1 (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 537.3 bits (1383), Expect = 7.2e-149
Identity = 254/268 (94.78%), Postives = 258/268 (96.27%), Query Frame = 0 

Query: 1   MALSISSTALSTLPL-RESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLP 60
           MALSISSTALSTLP+ RESSH  H   NFPGKFPKYNLRR S+HLNAAKSGVSSVCEPLP
Sbjct: 1   MALSISSTALSTLPISRESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLP 60

Query: 61  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 120
           PDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL
Sbjct: 61  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 120

Query: 121 LPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDL 180
           LPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPGSVDVDL
Sbjct: 121 LPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDL 180

Query: 181 KLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 240
           KLPHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY
Sbjct: 181 KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 240

Query: 241 TGQGPLENLAAHVADPGHCNIFSAFRSG 265
           TGQGPLENLAAHVADPGHCNIFSAF SG
Sbjct: 241 TGQGPLENLAAHVADPGHCNIFSAFSSG 268

[Close]
BLAST of Tan0018512 vs. NCBI nr
Match: XP_022967968.1 (photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 537.0 bits (1382), Expect = 9.4e-149
Identity = 252/266 (94.74%), Postives = 257/266 (96.62%), Query Frame = 0 

Query: 1   MALSISSTALSTLPLRES--SHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPD 60
           MALSISSTALS+LP+RES  SH+  NFPGKFPKYNLRR SSHLNAAKSGVSSVCEPLPPD
Sbjct: 17  MALSISSTALSSLPIRESSHSHRALNFPGKFPKYNLRRGSSHLNAAKSGVSSVCEPLPPD 76

Query: 61  RPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLP 120
           RPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLP
Sbjct: 77  RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLP 136

Query: 121 EWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKL 180
           EWFESLGLIQNFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPG VDVDLKL
Sbjct: 137 EWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGCVDVDLKL 196

Query: 181 PHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTG 240
           PHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTG
Sbjct: 197 PHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTG 256

Query: 241 QGPLENLAAHVADPGHCNIFSAFRSG 265
           QGPLENLAAHVADPGHCNIFSAF SG
Sbjct: 257 QGPLENLAAHVADPGHCNIFSAFSSG 282

[Close]
BLAST of Tan0018512 vs. ExPASy TrEMBL
Match: A0A6J1ERI7 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435884 PE=3 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.4e-150
Identity = 254/267 (95.13%), Postives = 258/267 (96.63%), Query Frame = 0 

Query: 1   MALSISSTALSTLPLRESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPP 60
           MALSISSTALSTLP+RESSH  H   NFPGKFPKYNLRR S+HLNAAKSGVSSVCEPLPP
Sbjct: 1   MALSISSTALSTLPIRESSHSHHRALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPP 60

Query: 61  DRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120
           DRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL
Sbjct: 61  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120

Query: 121 PEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLK 180
           PEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPGSVDVDLK
Sbjct: 121 PEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK 180

Query: 181 LPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240
           LPHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT
Sbjct: 181 LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240

Query: 241 GQGPLENLAAHVADPGHCNIFSAFRSG 265
           GQGPLENLAAHVADPGHCNIFSAF SG
Sbjct: 241 GQGPLENLAAHVADPGHCNIFSAFSSG 267

[Close]
BLAST of Tan0018512 vs. ExPASy TrEMBL
Match: A0A6J1ETS8 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435884 PE=3 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 3.5e-149
Identity = 254/268 (94.78%), Postives = 258/268 (96.27%), Query Frame = 0 

Query: 1   MALSISSTALSTLPL-RESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLP 60
           MALSISSTALSTLP+ RESSH  H   NFPGKFPKYNLRR S+HLNAAKSGVSSVCEPLP
Sbjct: 1   MALSISSTALSTLPISRESSHSHHRALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLP 60

Query: 61  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 120
           PDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL
Sbjct: 61  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 120

Query: 121 LPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDL 180
           LPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPGSVDVDL
Sbjct: 121 LPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDL 180

Query: 181 KLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 240
           KLPHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY
Sbjct: 181 KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 240

Query: 241 TGQGPLENLAAHVADPGHCNIFSAFRSG 265
           TGQGPLENLAAHVADPGHCNIFSAF SG
Sbjct: 241 TGQGPLENLAAHVADPGHCNIFSAFSSG 268

[Close]
BLAST of Tan0018512 vs. ExPASy TrEMBL
Match: A0A6J1HWP6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467340 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 4.6e-149
Identity = 252/266 (94.74%), Postives = 257/266 (96.62%), Query Frame = 0 

Query: 1   MALSISSTALSTLPLRES--SHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPD 60
           MALSISSTALS+LP+RES  SH+  NFPGKFPKYNLRR SSHLNAAKSGVSSVCEPLPPD
Sbjct: 17  MALSISSTALSSLPIRESSHSHRALNFPGKFPKYNLRRGSSHLNAAKSGVSSVCEPLPPD 76

Query: 61  RPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLP 120
           RPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLP
Sbjct: 77  RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLP 136

Query: 121 EWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKL 180
           EWFESLGLIQNFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPG VDVDLKL
Sbjct: 137 EWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGCVDVDLKL 196

Query: 181 PHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTG 240
           PHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTG
Sbjct: 197 PHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTG 256

Query: 241 QGPLENLAAHVADPGHCNIFSAFRSG 265
           QGPLENLAAHVADPGHCNIFSAF SG
Sbjct: 257 QGPLENLAAHVADPGHCNIFSAFSSG 282

[Close]
BLAST of Tan0018512 vs. ExPASy TrEMBL
Match: A0A6J1HS79 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467340 PE=3 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 1.1e-147
Identity = 252/267 (94.38%), Postives = 257/267 (96.25%), Query Frame = 0 

Query: 1   MALSISSTALSTLPL-RES--SHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPP 60
           MALSISSTALS+LP+ RES  SH+  NFPGKFPKYNLRR SSHLNAAKSGVSSVCEPLPP
Sbjct: 17  MALSISSTALSSLPISRESSHSHRALNFPGKFPKYNLRRGSSHLNAAKSGVSSVCEPLPP 76

Query: 61  DRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120
           DRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL
Sbjct: 77  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 136

Query: 121 PEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLK 180
           PEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPG VDVDLK
Sbjct: 137 PEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGCVDVDLK 196

Query: 181 LPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240
           LPHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT
Sbjct: 197 LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 256

Query: 241 GQGPLENLAAHVADPGHCNIFSAFRSG 265
           GQGPLENLAAHVADPGHCNIFSAF SG
Sbjct: 257 GQGPLENLAAHVADPGHCNIFSAFSSG 283

[Close]
BLAST of Tan0018512 vs. ExPASy TrEMBL
Match: A0A5A7UKU4 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001460 PE=3 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 2.0e-144
Identity = 246/264 (93.18%), Postives = 251/264 (95.08%), Query Frame = 0 

Query: 1   MALSISSTALSTLPLRESSHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRP 60
           MALSISSTALS+ P+RESSH+  NFPG FP + LRRD S L AAKSGVSSVCEPLPPDRP
Sbjct: 1   MALSISSTALSSFPIRESSHRA-NFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRP 60

Query: 61  LWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEW 120
           LWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPE LKWFAQAELMHARWAMLAVAGILLPEW
Sbjct: 61  LWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEW 120

Query: 121 FESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPH 180
           FESLGLIQNFSWYDAG+REYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPH
Sbjct: 121 FESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPH 180

Query: 181 KKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQG 240
           KKK K DVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQG
Sbjct: 181 KKKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQG 240

Query: 241 PLENLAAHVADPGHCNIFSAFRSG 265
           PLENLAAHVADPGHCNIFSAF SG
Sbjct: 241 PLENLAAHVADPGHCNIFSAFTSG 263

[Close]
BLAST of Tan0018512 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 405.6 bits (1041), Expect = 3.1e-113
Identity = 191/269 (71.00%), Postives = 211/269 (78.44%), Query Frame = 0 

Query: 1   MALSISSTALSTLPLRES------SHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEP 60
           MA +I+S   STL L  S        +PH          L R+   +  A   VSSVCEP
Sbjct: 1   MAFAIASALTSTLTLSTSRVQNPTQRRPHVASTSSTGGRLMRERLVVVRAGKEVSSVCEP 60

Query: 61  LPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAG 120
           LPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDP+ LKWFAQAEL+H+RWAMLAV G
Sbjct: 61  LPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTG 120

Query: 121 ILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDV 180
           I++PE  E LG I+NFSWYDAG+REYFAD TTL VAQ+ LMGW EGRRWADL+ PGSVD+
Sbjct: 121 IIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDI 180

Query: 181 DLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQA 240
           + K PHK  PKPDVGYPGG WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAF+G  FQA
Sbjct: 181 EPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQA 240

Query: 241 IYTGQGPLENLAAHVADPGHCNIFSAFRS 264
            YT Q P+ENL AH+ADPGHCN+FSAF S
Sbjct: 241 TYTSQDPIENLMAHLADPGHCNVFSAFTS 269

[Close]
BLAST of Tan0018512 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 314.3 bits (804), Expect = 9.2e-86
Identity = 135/205 (65.85%), Postives = 159/205 (77.56%), Query Frame = 0 

Query: 57  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 116
           PDRP+WFPGS+PPEWLDGSLPGDFGFDPLGL SDP+ LKW  QAE++H RWAML  AGI 
Sbjct: 50  PDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIF 109

Query: 117 LPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDL 176
           +PE+   +G++   SWY AG +EYF D TTL V +L L+GW EGRRWAD++ PGSV+ D 
Sbjct: 110 IPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDP 169

Query: 177 KLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 236
             P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IY
Sbjct: 170 VFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIY 229

Query: 237 TGQGPLENLAAHVADPGHCNIFSAF 262
           TG GP++NL AH+ADPGH  IF+AF
Sbjct: 230 TGTGPIDNLFAHLADPGHATIFAAF 254

[Close]
BLAST of Tan0018512 vs. TAIR 10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4 )

HSP 1 Score: 213.8 bits (543), Expect = 1.7e-55
Identity = 116/255 (45.49%), Postives = 148/255 (58.04%), Query Frame = 0 

Query: 7   STALSTLPLRESSHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGS 66
           +T  S    R  + KP    G   + N  RD S  +   S  +S  + +   +  W PG 
Sbjct: 5   TTHASASIFRPCTSKPRFLTGSSGRLN--RDLSFTSIGSSAKTSSFK-VEAKKGEWLPGL 64

Query: 67  SPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGL 126
           + P++L GSL GD GFDPLGL  DPE LKWF QAEL++ RWAML VAG+LLPE F  +G+
Sbjct: 65  ASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 124

Query: 127 IQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKP 186
           I    WYDAG  +YFA  +TL V +  L  +VE RRW D+ NPGSV+ D        PK 
Sbjct: 125 INVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKG 184

Query: 187 DVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLA 246
           +VGYPGG  F+P+ +      P    + KE+ NGRLAMLAF+G   Q   TG+GP ENL 
Sbjct: 185 EVGYPGGI-FNPLNFA-----PTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLL 244

Query: 247 AHVADPGHCNIFSAF 262
            H++DP H  I   F
Sbjct: 245 QHLSDPWHNTIVQTF 250

[Close]
BLAST of Tan0018512 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 178.3 bits (451), Expect = 7.9e-45
Identity = 95/232 (40.95%), Postives = 137/232 (59.05%), Query Frame = 0 

Query: 35  RRDSS-----HLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGS 94
           RRD+S      +++ K+    +   +  +R  W PG +PP +LDG+L GD+GFDPLGLG 
Sbjct: 17  RRDASSVITRRISSVKAAGGGINPTVAVERATWLPGLNPPPYLDGNLAGDYGFDPLGLGE 76

Query: 95  DPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREY-FADPTTLL 154
           DPE LKW+ QAEL+H+R+AML VAGIL  +   + G+     WY+AG  ++ FA   TL+
Sbjct: 77  DPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLI 136

Query: 155 VAQLALMGWVEGRRWADLVNPGSVDVDLKL---PHKKKPKPDVGYPGGFWFDPMMWGRGS 214
           V Q  LMG+ E +R+ D V+PGS   +              + GYPGG   +P+   +  
Sbjct: 137 VVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAK-D 196

Query: 215 PEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNI 258
            +     + KEIKNGRLAM+A +G + QA  T  GP++NL  H+++P H  I
Sbjct: 197 VQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTI 247

[Close]
BLAST of Tan0018512 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 178.3 bits (451), Expect = 7.9e-45
Identity = 95/232 (40.95%), Postives = 137/232 (59.05%), Query Frame = 0 

Query: 35  RRDSS-----HLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGS 94
           RRD+S      +++ K+    +   +  +R  W PG +PP +LDG+L GD+GFDPLGLG 
Sbjct: 17  RRDASSVITRRISSVKAAGGGINPTVAVERATWLPGLNPPPYLDGNLAGDYGFDPLGLGE 76

Query: 95  DPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREY-FADPTTLL 154
           DPE LKW+ QAEL+H+R+AML VAGIL  +   + G+     WY+AG  ++ FA   TL+
Sbjct: 77  DPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLI 136

Query: 155 VAQLALMGWVEGRRWADLVNPGSVDVDLKL---PHKKKPKPDVGYPGGFWFDPMMWGRGS 214
           V Q  LMG+ E +R+ D V+PGS   +              + GYPGG   +P+   +  
Sbjct: 137 VVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAK-D 196

Query: 215 PEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNI 258
            +     + KEIKNGRLAM+A +G + QA  T  GP++NL  H+++P H  I
Sbjct: 197 VQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTI 247

The following BLAST results are available for this feature:
BLAST of Tan0018512 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LCQ44.3e-11271.00Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis th... [more]
P138694.0e-8667.80Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S... [more]
P107081.3e-8463.85Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081... [more]
Q9SYW81.3e-8465.85Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis th... [more]
P275212.4e-5445.49Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
BLAST of Tan0018512 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022929243.12.9e-15095.13photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucur... [more]
KAG6588096.11.1e-14994.76Photosystem I chlorophyll a/b-binding protein 6, chloroplastic, partial [Cucurbi... [more]
XP_022929235.17.2e-14994.78photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X1 [Cucur... [more]
KAG7021985.17.2e-14994.78Photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Cucurbita argyro... [more]
XP_022967968.19.4e-14994.74photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucur... [more]
BLAST of Tan0018512 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ERI71.4e-15095.13Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1ETS83.5e-14994.78Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1HWP64.6e-14994.74Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1HS791.1e-14794.38Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A5A7UKU42.0e-14493.18Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11... [more]
BLAST of Tan0018512 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G19150.13.1e-11371.00photosystem I light harvesting complex gene 6 [more]
AT3G61470.19.2e-8665.85photosystem I light harvesting complex gene 2 [more]
AT3G47470.11.7e-5545.49light-harvesting chlorophyll-protein complex I subunit A4 [more]
AT1G45474.17.9e-4540.95photosystem I light harvesting complex gene 5 [more]
AT1G45474.27.9e-4540.95photosystem I light harvesting complex gene 5 [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 69..254
e-value: 1.4E-68
score: 232.5
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 68..234
e-value: 1.9E-52
score: 178.1
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 1..261
NoneNo IPR availablePANTHERPTHR21649:SF5PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTICcoord: 1..261
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 58..261

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0018512.1Tan0018512.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009768 photosynthesis, light harvesting in photosystem I
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0009416 response to light stimulus
biological_process GO:0009765 photosynthesis, light harvesting
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0009523 photosystem II
cellular_component GO:0016020 membrane
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0046872 metal ion binding