
Tan0018443 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCCTCAAGAAGTTCAAGAATTGCTTCACTTATATTGAGAATTCTAACCTTCATTTTCATCTTTATTTCTTTTATAATCAATGCCACCAATTCTAAAACTGTGCTCAAGGGGACTCTGGGTGAAACAAAAGTTAAGTTTAAAGATGTTTATTCCTATCGGTAAGTCTTTTTGGCTATGATTTTTCTCTATATTCTAAATAACTTTTGTTTTATTCTTTTGCTAGCTGATTGATTGTGTAACCAATTTTTTTTTTTTTTTTTTTTTTTTTTGTAATTTAAATATACAGTTACCTAATATCAACCGCTATTATTGGAGCTGTTTTGAGTTCGGTTCAAATTGTTCTCACCATTTATCATGTCGTTACAAACAACGATGGAACTCCCCTCTTCGATATGTATAGTGACAAGGTAGTTACAAGGATGTTTATTTGTTTACAATTATAAGATTTTAATTAGCACTTTTTGAAAAAAAGATATTTTCAATAAAAAAAATGTTATCATAATATATTTTTTTTTAAAATATTTTAAATAAAAAATTTATTTGGTTACACTATATTCTTAAATTTGTGTCTGTTTTTTATTACATATCTAAAAGATTTTTGGTTAATCATTTTAAAGTTATTTTGGGATAATTCATCTCTCAAGTATTTCTTCAAAAATGTTTTAAAATTAATATAACTTTTTTGAAACACTTTTTATTTATTAATATTTTTTAACAACCATGTTTGATCGTCAATAAACCATACTAAAAAGACTTTATTTTTTTTAATTTTTTAAAATGTGCTTATAGAAAAATTAATATTGTTCAAAAAGTATTTTTTTTCCGCAAGTTATTTCATACCATTAATGTTTGGTCTAAAATAAATGGGGGCAAAATTTTCATTCATCAAAGAGTTTTTGAAGTGAAAAAGGAAAATCACATGAGCTTTTAATGGTCCTTTATCCTATGTCTTAGCTCATCTTTATATTATATAAGAGTTGAACTTTTTATAAGTTTATTTTGTTATGGTTACCTCTTATCGTATCTACATCTTCGTACTTCCTCGATCAAATTAAGTTTAATTATGTTTTACATAGATTTTAACGTACGTTGCATTATTATACATGAAAAATAACATAAAAGATATAAATATATATATATATATATTATGAAAACTTAGAAAGGAGAATATATATAATATAATGTTTTTATGTTGTACGGTAGTTGTTGTCGTACCTTTTATTATCGGGCGCATCGGCGGGATTAGGCGCTGGGATCGATTTGAGAGCTAGTTTTAAAGGGTTGGGTGGCAACATTTTCAACTCATTTTTCGACAAGGGCAATGCTGCGGCTGCTATTCTTCTTCTTGCTTTTTTTTGTGCCGCCATTGTCTCAATTCTCTCTTCGTTGGCCCTCACAAGAAAGCTTTAA ATGGCAGCCTCAAGAAGTTCAAGAATTGCTTCACTTATATTGAGAATTCTAACCTTCATTTTCATCTTTATTTCTTTTATAATCAATGCCACCAATTCTAAAACTGTGCTCAAGGGGACTCTGGGTGAAACAAAAGTTAAGTTTAAAGATGTTTATTCCTATCGTTACCTAATATCAACCGCTATTATTGGAGCTGTTTTGAGTTCGGTTCAAATTGTTCTCACCATTTATCATGTCGTTACAAACAACGATGGAACTCCCCTCTTCGATATGTATAGTGACAAGTTGTTGTCGTACCTTTTATTATCGGGCGCATCGGCGGGATTAGGCGCTGGGATCGATTTGAGAGCTAGTTTTAAAGGGTTGGGTGGCAACATTTTCAACTCATTTTTCGACAAGGGCAATGCTGCGGCTGCTATTCTTCTTCTTGCTTTTTTTTGTGCCGCCATTGTCTCAATTCTCTCTTCGTTGGCCCTCACAAGAAAGCTTTAA ATGGCAGCCTCAAGAAGTTCAAGAATTGCTTCACTTATATTGAGAATTCTAACCTTCATTTTCATCTTTATTTCTTTTATAATCAATGCCACCAATTCTAAAACTGTGCTCAAGGGGACTCTGGGTGAAACAAAAGTTAAGTTTAAAGATGTTTATTCCTATCGTTACCTAATATCAACCGCTATTATTGGAGCTGTTTTGAGTTCGGTTCAAATTGTTCTCACCATTTATCATGTCGTTACAAACAACGATGGAACTCCCCTCTTCGATATGTATAGTGACAAGTTGTTGTCGTACCTTTTATTATCGGGCGCATCGGCGGGATTAGGCGCTGGGATCGATTTGAGAGCTAGTTTTAAAGGGTTGGGTGGCAACATTTTCAACTCATTTTTCGACAAGGGCAATGCTGCGGCTGCTATTCTTCTTCTTGCTTTTTTTTGTGCCGCCATTGTCTCAATTCTCTCTTCGTTGGCCCTCACAAGAAAGCTTTAA MAASRSSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLISTAIIGAVLSSVQIVLTIYHVVTNNDGTPLFDMYSDKLLSYLLLSGASAGLGAGIDLRASFKGLGGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRKL Homology
BLAST of Tan0018443 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 4.8e-29 Identity = 75/165 (45.45%), Postives = 114/165 (69.09%), Query Frame = 0
BLAST of Tan0018443 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2) HSP 1 Score: 122.1 bits (305), Expect = 5.9e-27 Identity = 73/168 (43.45%), Postives = 108/168 (64.29%), Query Frame = 0
BLAST of Tan0018443 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 4.6e-24 Identity = 72/168 (42.86%), Postives = 108/168 (64.29%), Query Frame = 0
BLAST of Tan0018443 vs. ExPASy Swiss-Prot
Match: A1XGB4 (CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 5.7e-22 Identity = 69/157 (43.95%), Postives = 99/157 (63.06%), Query Frame = 0
BLAST of Tan0018443 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.2e-21 Identity = 65/163 (39.88%), Postives = 100/163 (61.35%), Query Frame = 0
BLAST of Tan0018443 vs. NCBI nr
Match: XP_022134193.1 (CASP-like protein 4D1 [Momordica charantia]) HSP 1 Score: 231.9 bits (590), Expect = 4.0e-57 Identity = 126/162 (77.78%), Postives = 144/162 (88.89%), Query Frame = 0
BLAST of Tan0018443 vs. NCBI nr
Match: XP_038877614.1 (CASP-like protein 4D1 [Benincasa hispida]) HSP 1 Score: 225.3 bits (573), Expect = 3.7e-55 Identity = 122/160 (76.25%), Postives = 140/160 (87.50%), Query Frame = 0
BLAST of Tan0018443 vs. NCBI nr
Match: XP_023525049.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 219.5 bits (558), Expect = 2.1e-53 Identity = 126/162 (77.78%), Postives = 135/162 (83.33%), Query Frame = 0
BLAST of Tan0018443 vs. NCBI nr
Match: XP_022990642.1 (CASP-like protein 4D1 [Cucurbita maxima]) HSP 1 Score: 217.2 bits (552), Expect = 1.0e-52 Identity = 124/162 (76.54%), Postives = 135/162 (83.33%), Query Frame = 0
BLAST of Tan0018443 vs. NCBI nr
Match: XP_022954145.1 (CASP-like protein 4D1 [Cucurbita moschata]) HSP 1 Score: 216.9 bits (551), Expect = 1.3e-52 Identity = 124/162 (76.54%), Postives = 134/162 (82.72%), Query Frame = 0
BLAST of Tan0018443 vs. ExPASy TrEMBL
Match: A0A6J1C1A4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57 Identity = 126/162 (77.78%), Postives = 144/162 (88.89%), Query Frame = 0
BLAST of Tan0018443 vs. ExPASy TrEMBL
Match: A0A6J1JJD2 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 4.9e-53 Identity = 124/162 (76.54%), Postives = 135/162 (83.33%), Query Frame = 0
BLAST of Tan0018443 vs. ExPASy TrEMBL
Match: A0A6J1GRM4 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 6.4e-53 Identity = 124/162 (76.54%), Postives = 134/162 (82.72%), Query Frame = 0
BLAST of Tan0018443 vs. ExPASy TrEMBL
Match: A0A6J1HET3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 3.0e-50 Identity = 113/162 (69.75%), Postives = 139/162 (85.80%), Query Frame = 0
BLAST of Tan0018443 vs. ExPASy TrEMBL
Match: A0A6J1JSF8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 5.6e-49 Identity = 111/162 (68.52%), Postives = 138/162 (85.19%), Query Frame = 0
BLAST of Tan0018443 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22 Identity = 65/163 (39.88%), Postives = 100/163 (61.35%), Query Frame = 0
BLAST of Tan0018443 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 99.8 bits (247), Expect = 2.2e-21 Identity = 65/161 (40.37%), Postives = 101/161 (62.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|