Tan0018443 (gene) Snake gourd v1

Overview


Name	Tan0018443
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	CASP-like protein
Location	LG11: 6233368 .. 6234783 (-)
RNA-Seq Expression	Tan0018443
Synteny	Tan0018443

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCTCAAGAAGTTCAAGAATTGCTTCACTTATATTGAGAATTCTAACCTTCATTTTCATCTTTATTTCTTTTATAATCAATGCCACCAATTCTAAAACTGTGCTCAAGGGGACTCTGGGTGAAACAAAAGTTAAGTTTAAAGATGTTTATTCCTATCGGTAAGTCTTTTTGGCTATGATTTTTCTCTATATTCTAAATAACTTTTGTTTTATTCTTTTGCTAGCTGATTGATTGTGTAACCAATTTTTTTTTTTTTTTTTTTTTTTTTTGTAATTTAAATATACAGTTACCTAATATCAACCGCTATTATTGGAGCTGTTTTGAGTTCGGTTCAAATTGTTCTCACCATTTATCATGTCGTTACAAACAACGATGGAACTCCCCTCTTCGATATGTATAGTGACAAGGTAGTTACAAGGATGTTTATTTGTTTACAATTATAAGATTTTAATTAGCACTTTTTGAAAAAAAGATATTTTCAATAAAAAAAATGTTATCATAATATATTTTTTTTTAAAATATTTTAAATAAAAAATTTATTTGGTTACACTATATTCTTAAATTTGTGTCTGTTTTTTATTACATATCTAAAAGATTTTTGGTTAATCATTTTAAAGTTATTTTGGGATAATTCATCTCTCAAGTATTTCTTCAAAAATGTTTTAAAATTAATATAACTTTTTTGAAACACTTTTTATTTATTAATATTTTTTAACAACCATGTTTGATCGTCAATAAACCATACTAAAAAGACTTTATTTTTTTTAATTTTTTAAAATGTGCTTATAGAAAAATTAATATTGTTCAAAAAGTATTTTTTTTCCGCAAGTTATTTCATACCATTAATGTTTGGTCTAAAATAAATGGGGGCAAAATTTTCATTCATCAAAGAGTTTTTGAAGTGAAAAAGGAAAATCACATGAGCTTTTAATGGTCCTTTATCCTATGTCTTAGCTCATCTTTATATTATATAAGAGTTGAACTTTTTATAAGTTTATTTTGTTATGGTTACCTCTTATCGTATCTACATCTTCGTACTTCCTCGATCAAATTAAGTTTAATTATGTTTTACATAGATTTTAACGTACGTTGCATTATTATACATGAAAAATAACATAAAAGATATAAATATATATATATATATATTATGAAAACTTAGAAAGGAGAATATATATAATATAATGTTTTTATGTTGTACGGTAGTTGTTGTCGTACCTTTTATTATCGGGCGCATCGGCGGGATTAGGCGCTGGGATCGATTTGAGAGCTAGTTTTAAAGGGTTGGGTGGCAACATTTTCAACTCATTTTTCGACAAGGGCAATGCTGCGGCTGCTATTCTTCTTCTTGCTTTTTTTTGTGCCGCCATTGTCTCAATTCTCTCTTCGTTGGCCCTCACAAGAAAGCTTTAA

mRNA sequence

ATGGCAGCCTCAAGAAGTTCAAGAATTGCTTCACTTATATTGAGAATTCTAACCTTCATTTTCATCTTTATTTCTTTTATAATCAATGCCACCAATTCTAAAACTGTGCTCAAGGGGACTCTGGGTGAAACAAAAGTTAAGTTTAAAGATGTTTATTCCTATCGTTACCTAATATCAACCGCTATTATTGGAGCTGTTTTGAGTTCGGTTCAAATTGTTCTCACCATTTATCATGTCGTTACAAACAACGATGGAACTCCCCTCTTCGATATGTATAGTGACAAGTTGTTGTCGTACCTTTTATTATCGGGCGCATCGGCGGGATTAGGCGCTGGGATCGATTTGAGAGCTAGTTTTAAAGGGTTGGGTGGCAACATTTTCAACTCATTTTTCGACAAGGGCAATGCTGCGGCTGCTATTCTTCTTCTTGCTTTTTTTTGTGCCGCCATTGTCTCAATTCTCTCTTCGTTGGCCCTCACAAGAAAGCTTTAA

Coding sequence (CDS)

ATGGCAGCCTCAAGAAGTTCAAGAATTGCTTCACTTATATTGAGAATTCTAACCTTCATTTTCATCTTTATTTCTTTTATAATCAATGCCACCAATTCTAAAACTGTGCTCAAGGGGACTCTGGGTGAAACAAAAGTTAAGTTTAAAGATGTTTATTCCTATCGTTACCTAATATCAACCGCTATTATTGGAGCTGTTTTGAGTTCGGTTCAAATTGTTCTCACCATTTATCATGTCGTTACAAACAACGATGGAACTCCCCTCTTCGATATGTATAGTGACAAGTTGTTGTCGTACCTTTTATTATCGGGCGCATCGGCGGGATTAGGCGCTGGGATCGATTTGAGAGCTAGTTTTAAAGGGTTGGGTGGCAACATTTTCAACTCATTTTTCGACAAGGGCAATGCTGCGGCTGCTATTCTTCTTCTTGCTTTTTTTTGTGCCGCCATTGTCTCAATTCTCTCTTCGTTGGCCCTCACAAGAAAGCTTTAA

Protein sequence

MAASRSSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLISTAIIGAVLSSVQIVLTIYHVVTNNDGTPLFDMYSDKLLSYLLLSGASAGLGAGIDLRASFKGLGGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRKL

Homology

[Close]

BLAST of Tan0018443 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.8e-29
Identity = 75/165 (45.45%), Postives = 114/165 (69.09%), Query Frame = 0


Query: 4   SRSSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLISTAII 63
           S +SR+A+LILRILTFIF+  S +I  TN+ T L+  L E KV FKDVY+YRY+++T +I
Sbjct: 7   SLASRMAALILRILTFIFLIASLVILTTNTAT-LELDLVEVKVHFKDVYAYRYMLATIVI 66

Query: 64  GAVLSSVQIVLTIYHVVTNN-----DGTPLFDMYSDKLLSYLLLSGASAGLGAGIDLRAS 123
           G   + +QI  T+Y+V T N     DG   FD + DK++SY+L++GA+AG  +  D++  
Sbjct: 67  GLAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPV 126

Query: 124 FKGLGGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRKL 164
           F G G   F++F +KG A+A++LL+ F C A++S+ SS AL +++
Sbjct: 127 FSGSGD--FDAFINKGYASASLLLIGFVCTAVLSVFSSYALPKQV 168

[Close]

BLAST of Tan0018443 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 5.9e-27
Identity = 73/168 (43.45%), Postives = 108/168 (64.29%), Query Frame = 0


Query: 2   AASRSSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLISTA 61
           A S  SR+ +L LR+LTF F+ +S +I  TN+ T+  G + E KV+ KD YSYRY+++  
Sbjct: 14  APSMVSRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIG-IDEFKVRSKDFYSYRYMLAAI 73

Query: 62  IIGAVLSSVQIVLTIYHV------VTNNDGTPLFDMYSDKLLSYLLLSGASAGLGAGIDL 121
             G   + +QI LT+ H+       T+ DG  +FD Y DK++SY+L +GA+A  GA  +L
Sbjct: 74  AFGLTYTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKEL 133

Query: 122 RASFKGLGGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRKL 164
           +    GLGG   + FF+KG A+A++LLL F C AI+S+ SS AL +K+
Sbjct: 134 KTQLAGLGG---DKFFNKGYASASLLLLGFVCTAILSVFSSYALPKKV 177

[Close]

BLAST of Tan0018443 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.6e-24
Identity = 72/168 (42.86%), Postives = 108/168 (64.29%), Query Frame = 0


Query: 2   AASRSSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGET--KVKFKDVYSYRYLIS 61
           ++S  SR   L+LR+LTF+F+ I+ I+ A     ++K T  ET  ++KF D+Y+YRY+IS
Sbjct: 12  SSSTGSRTVLLLLRVLTFVFLLIALILIA-----IVKQTDDETGVEIKFNDIYAYRYMIS 71

Query: 62  TAIIGAVLSSVQIVLTIYHVVTNN-----DGTPLFDMYSDKLLSYLLLSGASAGLGAGID 121
           T IIG   + +Q+ L+I+ VV+ N     DG  LFD + DK++SYLL+SG++AG G  ++
Sbjct: 72  TIIIGFAYNLLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVE 131

Query: 122 LRASFKGLGGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRK 163
           L        G   NSF DK NA+A++LL+AF   A+ S  +S AL +K
Sbjct: 132 LGR------GVPSNSFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of Tan0018443 vs. ExPASy Swiss-Prot
Match: A1XGB4 (CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.7e-22
Identity = 69/157 (43.95%), Postives = 99/157 (63.06%), Query Frame = 0


Query: 11  SLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLISTAIIGAVLSSV 70
           SLI+RILT I + ISFI+ ATN++TV     G+ K+KFKD Y+YRYLI+T IIG   + +
Sbjct: 14  SLIVRILTLICLLISFIVIATNNQTV-STVAGDVKIKFKDFYAYRYLIATVIIGMAYTLL 73

Query: 71  QIVLTIYHVVTNN----DGTPLFDMYSDKLLSYLLLSGASAGLGAGIDLRASFKGLGGNI 130
           QI  +I  + T N    +G  LFD Y DK +SY L++GA+A  G   DL+   +  G + 
Sbjct: 74  QIAFSISLLTTGNRIGGEGFLLFDFYGDKFISYFLVTGAAASFGMTQDLK---QLEGSDN 133

Query: 131 FNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRKL 164
           ++ F +  NAAA++ L+ FF A   SI SS  L +++
Sbjct: 134 YSKFLNTSNAAASLCLIGFFFAVASSIFSSYNLPKRI 166

[Close]

BLAST of Tan0018443 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-21
Identity = 65/163 (39.88%), Postives = 100/163 (61.35%), Query Frame = 0


Query: 6   SSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLISTAIIGA 65
           S ++  L+LR+LT +F+ I+ II +TNS T++       K  FKDVY+YRY++S A+IG 
Sbjct: 12  SLKVLLLLLRVLTGVFLVIALIILSTNSVTIVSQG-SALKFHFKDVYAYRYMLSAAVIGL 71

Query: 66  VLSSVQIVLTIYHVVT--NNDGTPLFDMYSDKLLSYLLLSGASAGLGAGIDLRASFKGL- 125
           V + +Q+  TI    T   N      D Y DKL+SYL+ +G++AG G   DL+ +F  L 
Sbjct: 72  VYAVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALV 131

Query: 126 ---GGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRK 163
                +  + FF KG A+A++LL AF C A++S+ SS A+ ++
Sbjct: 132 ALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of Tan0018443 vs. NCBI nr
Match: XP_022134193.1 (CASP-like protein 4D1 [Momordica charantia])

HSP 1 Score: 231.9 bits (590), Expect = 4.0e-57
Identity = 126/162 (77.78%), Postives = 144/162 (88.89%), Query Frame = 0


Query: 1   MAASRSSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLIST 60
           MAAS+ SRIASLILRILTF+ IFIS +I ATNSKTVLKGT  E KV+FKDVYSYRYL + 
Sbjct: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60

Query: 61  AIIGAVLSSVQIVLTIYHVVTNNDGTPLFDMYSDKLLSYLLLSGASAGLGAGIDLRASFK 120
           A+IGA LS +QI LT+YHVVT +DGTP FDM+SDKLL+YLLLSGASAGLGAGIDLR+++K
Sbjct: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120

Query: 121 GLGGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRK 163
            L GNIFNSFFDKG+A+AAILLLAF C+A+VSILSSLAL RK
Sbjct: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRK 162

[Close]

BLAST of Tan0018443 vs. NCBI nr
Match: XP_038877614.1 (CASP-like protein 4D1 [Benincasa hispida])

HSP 1 Score: 225.3 bits (573), Expect = 3.7e-55
Identity = 122/160 (76.25%), Postives = 140/160 (87.50%), Query Frame = 0


Query: 3   ASRSSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLISTAI 62
           AS+ SRIASLILRILTFI IF++ +I ATNSKTVL+GT+ ETK++FKDV SYRYL++ A+
Sbjct: 2   ASKGSRIASLILRILTFILIFVALLIIATNSKTVLEGTVNETKIEFKDVNSYRYLVAVAV 61

Query: 63  IGAVLSSVQIVLTIYHVVTNNDGTPLFDMYSDKLLSYLLLSGASAGLGAGIDLRASFKGL 122
           IG  LS +QI  TIYH+VT  DGTPLFD++SDKLLSYLLLSGASAGLGAGID+R +FK L
Sbjct: 62  IGGALSLLQIAFTIYHLVTKGDGTPLFDLFSDKLLSYLLLSGASAGLGAGIDMRVNFKEL 121

Query: 123 GGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRK 163
            GN FNSFFDKG+AAAAILLLAF CAAIVSILSSLAL RK
Sbjct: 122 VGNFFNSFFDKGSAAAAILLLAFICAAIVSILSSLALIRK 161

[Close]

BLAST of Tan0018443 vs. NCBI nr
Match: XP_023525049.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219.5 bits (558), Expect = 2.1e-53
Identity = 126/162 (77.78%), Postives = 135/162 (83.33%), Query Frame = 0


Query: 1   MAASRSSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLIST 60
           M  S+ SRIASLILRILTFI IFIS IINATNSKT  KG   ETK KFKDVYSYRYLIST
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLIST 60

Query: 61  AIIGAVLSSVQIVLTIYHVVTNNDGTPLFDMYSDKLLSYLLLSGASAGLGAGIDLRASFK 120
            IIGAVLS +QI L IY+VVT +  T LFDM+SDKLLSYLLLSGASAGLGAGIDLR   K
Sbjct: 61  MIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 GLGGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRK 163
            L GN+ NSFFDKGNA+AA+LLLAF CAA+VSILSSLAL RK
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 162

[Close]

BLAST of Tan0018443 vs. NCBI nr
Match: XP_022990642.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 217.2 bits (552), Expect = 1.0e-52
Identity = 124/162 (76.54%), Postives = 135/162 (83.33%), Query Frame = 0


Query: 1   MAASRSSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLIST 60
           M  S+ SRIASLILRILTFI IFIS +INATNSKT+ KG   ETK KFKDVYSYRYLIST
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60

Query: 61  AIIGAVLSSVQIVLTIYHVVTNNDGTPLFDMYSDKLLSYLLLSGASAGLGAGIDLRASFK 120
            IIGAVLS +QI L IY+VVT +  T LFDM+SDKLLSYLLLSGASAGLGAGIDLR   K
Sbjct: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 GLGGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRK 163
            L GN+ NSF DKGNA+AA+LLLAF CAA+VSILSSLAL RK
Sbjct: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRK 162

[Close]

BLAST of Tan0018443 vs. NCBI nr
Match: XP_022954145.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 216.9 bits (551), Expect = 1.3e-52
Identity = 124/162 (76.54%), Postives = 134/162 (82.72%), Query Frame = 0


Query: 1   MAASRSSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLIST 60
           M  S+ SRIASLILRILTFI IFIS IINATNSKT  KG   ET  KFKDVYSYRYLIST
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLIST 60

Query: 61  AIIGAVLSSVQIVLTIYHVVTNNDGTPLFDMYSDKLLSYLLLSGASAGLGAGIDLRASFK 120
            +IGAVLS +QI L IY+VVT +  T LFDM+SDKLLSYLLLSGASAGLGAGIDLR   K
Sbjct: 61  TVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 GLGGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRK 163
            L GN+ NSFFDKGNA+AA+LLLAF CAA+VSILSSLAL RK
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 162

[Close]

BLAST of Tan0018443 vs. ExPASy TrEMBL
Match: A0A6J1C1A4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 126/162 (77.78%), Postives = 144/162 (88.89%), Query Frame = 0


Query: 1   MAASRSSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLIST 60
           MAAS+ SRIASLILRILTF+ IFIS +I ATNSKTVLKGT  E KV+FKDVYSYRYL + 
Sbjct: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60

Query: 61  AIIGAVLSSVQIVLTIYHVVTNNDGTPLFDMYSDKLLSYLLLSGASAGLGAGIDLRASFK 120
           A+IGA LS +QI LT+YHVVT +DGTP FDM+SDKLL+YLLLSGASAGLGAGIDLR+++K
Sbjct: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120

Query: 121 GLGGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRK 163
            L GNIFNSFFDKG+A+AAILLLAF C+A+VSILSSLAL RK
Sbjct: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRK 162

[Close]

BLAST of Tan0018443 vs. ExPASy TrEMBL
Match: A0A6J1JJD2 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 4.9e-53
Identity = 124/162 (76.54%), Postives = 135/162 (83.33%), Query Frame = 0


Query: 1   MAASRSSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLIST 60
           M  S+ SRIASLILRILTFI IFIS +INATNSKT+ KG   ETK KFKDVYSYRYLIST
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60

Query: 61  AIIGAVLSSVQIVLTIYHVVTNNDGTPLFDMYSDKLLSYLLLSGASAGLGAGIDLRASFK 120
            IIGAVLS +QI L IY+VVT +  T LFDM+SDKLLSYLLLSGASAGLGAGIDLR   K
Sbjct: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 GLGGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRK 163
            L GN+ NSF DKGNA+AA+LLLAF CAA+VSILSSLAL RK
Sbjct: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRK 162

[Close]

BLAST of Tan0018443 vs. ExPASy TrEMBL
Match: A0A6J1GRM4 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 6.4e-53
Identity = 124/162 (76.54%), Postives = 134/162 (82.72%), Query Frame = 0


Query: 1   MAASRSSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLIST 60
           M  S+ SRIASLILRILTFI IFIS IINATNSKT  KG   ET  KFKDVYSYRYLIST
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLIST 60

Query: 61  AIIGAVLSSVQIVLTIYHVVTNNDGTPLFDMYSDKLLSYLLLSGASAGLGAGIDLRASFK 120
            +IGAVLS +QI L IY+VVT +  T LFDM+SDKLLSYLLLSGASAGLGAGIDLR   K
Sbjct: 61  TVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 GLGGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRK 163
            L GN+ NSFFDKGNA+AA+LLLAF CAA+VSILSSLAL RK
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 162

[Close]

BLAST of Tan0018443 vs. ExPASy TrEMBL
Match: A0A6J1HET3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 3.0e-50
Identity = 113/162 (69.75%), Postives = 139/162 (85.80%), Query Frame = 0


Query: 1   MAASRSSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLIST 60
           MAAS+ SRIASLILRILTFI IFIS IINATNSKT+ KGT  E K++FK+VYSYRYLI+ 
Sbjct: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AIIGAVLSSVQIVLTIYHVVTNNDGTPLFDMYSDKLLSYLLLSGASAGLGAGIDLRASFK 120
           A+IG VLS +QI+L+IYH+VT ++GTPLF ++SD LLSYLLLS +SA LGAGID+RA+ K
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120

Query: 121 GLGGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRK 163
            L G +F+SFFD+G+ AAA+L +AF CAA+VSILS+LAL RK
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRK 162

[Close]

BLAST of Tan0018443 vs. ExPASy TrEMBL
Match: A0A6J1JSF8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 5.6e-49
Identity = 111/162 (68.52%), Postives = 138/162 (85.19%), Query Frame = 0


Query: 1   MAASRSSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLIST 60
           MAAS+ SRIA+LILRILT I IFIS IINA+NSKT+ KGT  E K++FK+VYSYRYLI+ 
Sbjct: 1   MAASKGSRIATLILRILTLILIFISLIINASNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AIIGAVLSSVQIVLTIYHVVTNNDGTPLFDMYSDKLLSYLLLSGASAGLGAGIDLRASFK 120
           A+IG VLS +QI+L+IYH+VT ++GTPLF ++SD LLSYLLLS +SA LGAGID RA+ K
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDTRANLK 120

Query: 121 GLGGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRK 163
            L G +F+SFFD+G+ AAA+LL+AF CAA+VSILS+LAL RK
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLLIAFICAAVVSILSALALIRK 162

[Close]

BLAST of Tan0018443 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 65/163 (39.88%), Postives = 100/163 (61.35%), Query Frame = 0


Query: 6   SSRIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLISTAIIGA 65
           S ++  L+LR+LT +F+ I+ II +TNS T++       K  FKDVY+YRY++S A+IG 
Sbjct: 12  SLKVLLLLLRVLTGVFLVIALIILSTNSVTIVSQG-SALKFHFKDVYAYRYMLSAAVIGL 71

Query: 66  VLSSVQIVLTIYHVVT--NNDGTPLFDMYSDKLLSYLLLSGASAGLGAGIDLRASFKGL- 125
           V + +Q+  TI    T   N      D Y DKL+SYL+ +G++AG G   DL+ +F  L 
Sbjct: 72  VYAVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALV 131

Query: 126 ---GGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRK 163
                +  + FF KG A+A++LL AF C A++S+ SS A+ ++
Sbjct: 132 ALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of Tan0018443 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 99.8 bits (247), Expect = 2.2e-21
Identity = 65/161 (40.37%), Postives = 101/161 (62.73%), Query Frame = 0


Query: 8   RIASLILRILTFIFIFISFIINATNSKTVLKGTLGETKVKFKDVYSYRYLISTAIIGAVL 67
           R   L+LR+LT  F+ I+ ++ +TN+ T L+ +    K+ F DVY+YRY++S A+IG V 
Sbjct: 14  RTVLLLLRVLTAAFLLITVVLISTNTVT-LEISSTSIKLPFNDVYAYRYMLSAAVIGLVY 73

Query: 68  SSVQIVLTIYHVVTNNDG--TPLFDMYSDKLLSYLLLSGASAGLGAGIDLRASFKGL--- 127
           + VQ+ LTI    T      T  FD Y DK++SYLL +G++AG G   DL+ ++  L   
Sbjct: 74  AVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEF 133

Query: 128 -GGNIFNSFFDKGNAAAAILLLAFFCAAIVSILSSLALTRK 163
              +  + FF KG A+A++LL AF   A++S+ SSLAL+++
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKR 173

The following BLAST results are available for this feature:

BLAST of Tan0018443 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9SXY8	4.8e-29	45.45	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
B9NBE5	5.9e-27	43.45	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
C6T1Z6	4.6e-24	42.86	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
A1XGB4	5.7e-22	43.95	CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1	[more]
Q56X75	2.2e-21	39.88	CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1	[more]

BLAST of Tan0018443 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134193.1	4.0e-57	77.78	CASP-like protein 4D1 [Momordica charantia]	[more]
XP_038877614.1	3.7e-55	76.25	CASP-like protein 4D1 [Benincasa hispida]	[more]
XP_023525049.1	2.1e-53	77.78	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]
XP_022990642.1	1.0e-52	76.54	CASP-like protein 4D1 [Cucurbita maxima]	[more]
XP_022954145.1	1.3e-52	76.54	CASP-like protein 4D1 [Cucurbita moschata]	[more]

BLAST of Tan0018443 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1A4	1.9e-57	77.78	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1	[more]
A0A6J1JJD2	4.9e-53	76.54	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1	[more]
A0A6J1GRM4	6.4e-53	76.54	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1	[more]
A0A6J1HET3	3.0e-50	69.75	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1	[more]
A0A6J1JSF8	5.6e-49	68.52	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1	[more]

BLAST of Tan0018443 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39518.1	1.5e-22	39.88	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	2.2e-21	40.37	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 5..147 e-value: 8.8E-23 score: 80.7
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 4..162
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 4..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0018443.1	Tan0018443.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding