Tan0018358 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAGAACTCAGCCCTTCATCTTCCTCTCTCACTCTCACGTGCTCCACCTTCTTCTTCTTCATCACGCCGTGTCCTCCTCCGTTTCAGCAGCTCAGTGTCGCCGCCGGCCGTCTTTCTTCCGCTTGTGCCGCCGTAGCCTCCTCTAGCAGGATTACACTGATTTTCTACTCTCTTATTTTTACTGGTATTCTCCCCATCTCCACCTATCTCTTTCTTCTCATTTTGAAAACACAAATTAGGGCTTATTTAATCAAAAAATGGAGGAGATGTTTTTGCTTTCATATATATTTTTTTAATTTCTTTTTAATAAAAAACAATAGCCGAAAGAAAATAAAAATCATCGGTCCAAACGAACCCTCTGATTGGATCGTTGTGATTACTGATTGACTCAAATCCCATCTAAACCGTTCGTTTATTTCGGTTGCAGAGTCTTTTATGCTACATCCGGACACACCCAATCAAAACCTGTCTTCCAGATCTTGCGATGAAAATTTTGAGTTTCCCTCCAATTCAAAGTTCATCGCTTTCACTGAAATTTTGATTAAATCAATGTTTGGAAAGTCTGCGCCTCAATCTCCTTCCTCAACCTCGCTTTCTTTCGCGAATTCACCATTTGCATATCTTCTTTCTCATCCCAAATCTTCGCCAATTCTCAATCCAGGGTGCCGCTCTACCCGTCTGTTGAATTATTATTTATTCTATATAGTTTTTTGTTTTGTTCTTGATTGTTTTTTAATTTCGTCTCATTTTCATTTCTGTATGCTAGTGCGTTATTTGGTGTAGTTTGTGTATGTATTCTCAGAAATTCGTATTATGTTTCAATTTTTCATTCTAGTGGCCGAATGCAAAAGCTGTTTATAATTTTCTATTGTTGCAATTAAGTTGCGAATTTCCACATTCATTGATTGGATTCTTTTTTTTTTTTACAAAAAGGAGTTCCTTAGTATTCCCACCGAGAAGTAAATATAAGTTTTTAATTTGGAGGTGAGTCGTTTTTGAAAGATTTGAAGGTCTCTGCGTAATGCATATTTTACTCTTTAGGTTTTTCTGTACTTTGCCTTCTAGTTTTACAATTCGTTTTCAGTTTTTTAATATCAGAGAAACATTCTTGGTTTCCTCAATAGTTTGACTGTTTTAACTCTCATTACATTTCTCGCAGTTCCAGTAAACATTTTACTGTAGAAGTAGGTGGTGCCAGTTGAAAATATATCATGGTGGAAGTTGAGTAATTTCTTCTAGGGGCATTGAACTTTGGAGCAACGTGTTGAATACCCTAAAAGATGACAAATTATTATGATATTGATGACATTCTGGCGGAGGAAGAGGTCAATATCTTATCCTTTTACCTGATAAGGTCTTATAAACTTGCAAGCTCATTATCGAGTCTTGTTTTGTCCTCTTGACAGCTTGTCTCCGTTGTGTTCCAAAAGGCGGTTAATGGAGTTGGAATCGATCCCAGTTCTGAAACAGATTCTGTAAGTTCCAGGGATTAGTAGGAGATATGATATGGATGTTGAATGGCAAACTTACGTTTTTTATTTGGTGTAATTTCAGGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTTGCGAAAGAGCTGCATCTTAGACAAGTGGCGGTTATGAGCTTACCTGCTTGTTTTAACCAAAGGTAGCAATAGCCATTACATTCAGGCTCTGCATACGACCAATAATTTCCATAAACTTGTAGTGTTCTAGACTTTTTGGGAACATAGTTGAATGAGGATCTTTTTTATTACGCCCCCACTTACTCCCTAAACACTTACCCGCATAGACACTGAATTTTGATTCTCTTTCTTCTAATTTTGCGATTGCATTCATGCACAATTTCCTTACTTTCTTTTCACCTGCTAATTGCTTTACAAGCAGAAACGTCTGAACTGGAATCTCCAGAGTAGAGGAATTAGTCGGATTTAATGAGGTCATTTTAAAGTTATTGGTGTTCTTATTTTTAATTTAAGAACTACTCTTTTTTGTGTGTTATTACTTTTTTTTTAGGAACTACTCTTCTGGCTTGCTCATGAATCACATTGGAGACAAGTGATGTTACTGGCATTGTCTTCTAGTTTCATCAATTAAAACGAAAATAATGGCTATTACTTGATTACTCTGCCTGATCTATCATGGCCATGAAATTGTAGTATTCCAAACCTTTTGAGATTTAGTTTATAGAATCTCATTTAGAATGCTCCCACTTGCTCCGTAGAAGCTGACCCACAAAGAAAATGTTTTTTCCTTTGTGTTACGAACCTGTTTGTGGTTCAATCTTTTCATGTGCTAACTATTTATTACCAGCAGAAACTTCCTGCCCTAGAATTTCAAGATTAAAGGAATCAGTAAGACGTGGATAATGATATTTATTCTTATCCCAAAAAACAAGAAAAGATGATGATATGTATAGTTGACTAGTGCTCTTGTTCTCTAACCAGAACACGACTGGAAATTCAGGCGGATGCTGCATTTGTTGATCTACGATCTAGATGTCAATACTTCTATGAATTTGGATGCAAGATTGCACCACTGTGAGTATCTGGAGATCCAACTCTTTTTGTTTATCAGATTTTTTTTTTTAAATATTCGTGAGAGCTCATGCTCACATTGTGGACTTCAATTTTTCCTACAATCCAACCGTCTGAACCTACTACATTGGGTTGCCAAGATAACTCATAGGATATTAAATCCTAAGTAAGTGGCCACCATGGATTTACCACAGTTCTTCTATGAGGAGAAAATTTTATACTGCTGCTTTGTCCATTATTTTAGCTGATGTCATACTTATATCTATTTGAAAGTGAAAGTGAGTAAGTGCATTTTCATTTGAAACACATTTGTACTCGAATAAGCAATTGCTTGTTTTTACCTTTGACAGTAGTACCATTCTGAAGGCACGGCATTACCATTCTGAAGGCACGGCATTAAACAGATCTTTTTGTAAACGTAATAATTAGGACATCTAGCCAGAAGACTACTTTTTTACTGCTGTCTAAATGACATATGAAATGATTAATTAAAGCTTGTATATATTAAGCATGTTGGTTGGACATCCTACTAAGGACTAAAGATTTTGCATTTAGGCTTGAACTCTTGGAAGTATTTTATGATAATCTGGCTAGCATGTCTGCATCTCAAGTTTTGCATCTCAATGAATAGCAGTCTCATTTTCATTCCATTGTAGATGTAGACTGATAAATATGCATAAAGATTCAAAACTGACTATCTAACCCCTTTCTACATATGGAGTATATCTTGTAAAAAGTGTGTTTGTTGCCTTGATCTCGTGCATGTAGGATGTCTGTTTTGTTGGAGTGTGCTCTACCAAATCGCTGTTAGTAATATTTGGTACCTAAATGGACGAGAATGTAAAAGATTGAATGCTATTAATTCTCATTTTTTCTTTCGCAAACTTCGACGACAGGGTTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGTAGGTACAAGGAAGTTCTTACCAAGGCTCACACTGCAGTATTTGCTGCAAGTTCTAAATACTTGACAGTTCTATCAAAAGAAGAAACCAAAAGTGAGATTTTTTGTTACATGTTTTGTCTGTCCTCTTGTTTTCATATTTCGTGCTTCTCTTCAAACTCACATCAATATAATCCTTGTGTGCAGTGTATGAGGCAGCTCAATCCTCTATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCGTAGATTTCAGAAAGCATCCTTTCTTGGGGGGAAGAGGAAGTCTTCAGAGTAGGCACTTAATTCGAGCTTAAATGTATTATATTTTCACCCTTTGTTGCATGAGCAAATAAAATAATGTAGAATTCTGCATGCCCCTTCCTGGAAAAGTATTAATTTTTCATTGTTTCCATTTTCAAAGGTTCTAATTTATTCACCATTTGTGGGGTAGGGAGTTTAACCTCTAACATTTTGATTAAAAATGAGAATATATATGCTTATATTATTTT AAAAAAAGAACTCAGCCCTTCATCTTCCTCTCTCACTCTCACGTGCTCCACCTTCTTCTTCTTCATCACGCCGTGTCCTCCTCCGTTTCAGCAGCTCAGTGTCGCCGCCGGCCGTCTTTCTTCCGCTTGTGCCGCCGTAGCCTCCTCTAGCAGGATTACACTGATTTTCTACTCTCTTATTTTTACTGTTCCAGTAAACATTTTACTGTAGAAGTAGGTGGTGCCAGTTGAAAATATATCATGGTGGAAGTTGAGTAATTTCTTCTAGGGGCATTGAACTTTGGAGCAACGTGTTGAATACCCTAAAAGATGACAAATTATTATGATATTGATGACATTCTGGCGGAGGAAGAGCTTGTCTCCGTTGTGTTCCAAAAGGCGGTTAATGGAGTTGGAATCGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTTGCGAAAGAGCTGCATCTTAGACAAGTGGCGGTTATGAGCTTACCTGCTTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCGGATGCTGCATTTGTTGATCTACGATCTAGATGTCAATACTTCTATGAATTTGGATGCAAGATTGCACCACTGGTTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGTAGGTACAAGGAAGTTCTTACCAAGGCTCACACTGCAGTATTTGCTGCAAGTTCTAAATACTTGACAGTTCTATCAAAAGAAGAAACCAAAATGTATGAGGCAGCTCAATCCTCTATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCGTAGATTTCAGAAAGCATCCTTTCTTGGGGGGAAGAGGAAGTCTTCAGAGTAGGCACTTAATTCGAGCTTAAATGTATTATATTTTCACCCTTTGTTGCATGAGCAAATAAAATAATGTAGAATTCTGCATGCCCCTTCCTGGAAAAGTATTAATTTTTCATTGTTTCCATTTTCAAAGGTTCTAATTTATTCACCATTTGTGGGGTAGGGAGTTTAACCTCTAACATTTTGATTAAAAATGAGAATATATATGCTTATATTATTTT ATGACAAATTATTATGATATTGATGACATTCTGGCGGAGGAAGAGCTTGTCTCCGTTGTGTTCCAAAAGGCGGTTAATGGAGTTGGAATCGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTTGCGAAAGAGCTGCATCTTAGACAAGTGGCGGTTATGAGCTTACCTGCTTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCGGATGCTGCATTTGTTGATCTACGATCTAGATGTCAATACTTCTATGAATTTGGATGCAAGATTGCACCACTGGTTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGTAGGTACAAGGAAGTTCTTACCAAGGCTCACACTGCAGTATTTGCTGCAAGTTCTAAATACTTGACAGTTCTATCAAAAGAAGAAACCAAAATGTATGAGGCAGCTCAATCCTCTATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCGTAGATTTCAGAAAGCATCCTTTCTTGGGGGGAAGAGGAAGTCTTCAGAGTAG MTNYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQVAVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMGGRRFQKASFLGGKRKSSE Homology
BLAST of Tan0018358 vs. ExPASy Swiss-Prot
Match: Q7ZT01 (DNA replication complex GINS protein PSF3 OS=Xenopus laevis OX=8355 GN=gins3 PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.3e-14 Identity = 48/170 (28.24%), Postives = 83/170 (48.82%), Query Frame = 0
BLAST of Tan0018358 vs. ExPASy Swiss-Prot
Match: Q4WQ54 (DNA replication complex GINS protein psf3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=psf3 PE=3 SV=2) HSP 1 Score: 79.0 bits (193), Expect = 6.5e-14 Identity = 44/170 (25.88%), Postives = 83/170 (48.82%), Query Frame = 0
BLAST of Tan0018358 vs. ExPASy Swiss-Prot
Match: Q9BRX5 (DNA replication complex GINS protein PSF3 OS=Homo sapiens OX=9606 GN=GINS3 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 6.0e-12 Identity = 51/175 (29.14%), Postives = 83/175 (47.43%), Query Frame = 0
BLAST of Tan0018358 vs. ExPASy Swiss-Prot
Match: Q5RDV0 (DNA replication complex GINS protein PSF3 OS=Pongo abelii OX=9601 GN=GINS3 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 6.0e-12 Identity = 51/175 (29.14%), Postives = 84/175 (48.00%), Query Frame = 0
BLAST of Tan0018358 vs. ExPASy Swiss-Prot
Match: Q9UTC3 (DNA replication complex GINS protein psf3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=psf3 PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 6.0e-12 Identity = 41/118 (34.75%), Postives = 65/118 (55.08%), Query Frame = 0
BLAST of Tan0018358 vs. NCBI nr
Match: XP_022990174.1 (DNA replication complex GINS protein PSF3-like [Cucurbita maxima] >XP_022990175.1 DNA replication complex GINS protein PSF3-like [Cucurbita maxima] >XP_022990176.1 DNA replication complex GINS protein PSF3-like [Cucurbita maxima]) HSP 1 Score: 346.7 bits (888), Expect = 1.3e-91 Identity = 178/185 (96.22%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Tan0018358 vs. NCBI nr
Match: XP_022962205.1 (DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_022962214.1 DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_022962222.1 DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_023549787.1 DNA replication complex GINS protein PSF3-like [Cucurbita pepo subsp. pepo] >XP_023549796.1 DNA replication complex GINS protein PSF3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 345.5 bits (885), Expect = 2.8e-91 Identity = 177/185 (95.68%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Tan0018358 vs. NCBI nr
Match: KAG6602618.1 (hypothetical protein SDJN03_07851, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 344.4 bits (882), Expect = 6.3e-91 Identity = 176/185 (95.14%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Tan0018358 vs. NCBI nr
Match: XP_038885801.1 (DNA replication complex GINS protein PSF3-like [Benincasa hispida] >XP_038885802.1 DNA replication complex GINS protein PSF3-like [Benincasa hispida]) HSP 1 Score: 341.3 bits (874), Expect = 5.3e-90 Identity = 173/185 (93.51%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Tan0018358 vs. NCBI nr
Match: XP_008441464.1 (PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo] >XP_008441465.1 PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo]) HSP 1 Score: 340.5 bits (872), Expect = 9.1e-90 Identity = 172/185 (92.97%), Postives = 181/185 (97.84%), Query Frame = 0
BLAST of Tan0018358 vs. ExPASy TrEMBL
Match: A0A6J1JM79 (DNA replication complex GINS protein PSF3-like OS=Cucurbita maxima OX=3661 GN=LOC111487145 PE=3 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 6.1e-92 Identity = 178/185 (96.22%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Tan0018358 vs. ExPASy TrEMBL
Match: A0A6J1HEE0 (DNA replication complex GINS protein PSF3-like OS=Cucurbita moschata OX=3662 GN=LOC111462725 PE=3 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 1.4e-91 Identity = 177/185 (95.68%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Tan0018358 vs. ExPASy TrEMBL
Match: A0A1S3B3H3 (DNA replication complex GINS protein PSF3-like OS=Cucumis melo OX=3656 GN=LOC103485572 PE=3 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 4.4e-90 Identity = 172/185 (92.97%), Postives = 181/185 (97.84%), Query Frame = 0
BLAST of Tan0018358 vs. ExPASy TrEMBL
Match: A0A5A7UGU7 (DNA replication complex GINS protein PSF3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G002360 PE=3 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 4.4e-90 Identity = 172/185 (92.97%), Postives = 181/185 (97.84%), Query Frame = 0
BLAST of Tan0018358 vs. ExPASy TrEMBL
Match: A0A0A0K8J6 (Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G011640 PE=3 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 2.2e-89 Identity = 171/185 (92.43%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Tan0018358 vs. TAIR 10
Match: AT1G19080.1 (GINS complex protein ) HSP 1 Score: 253.8 bits (647), Expect = 1.0e-67 Identity = 126/184 (68.48%), Postives = 144/184 (78.26%), Query Frame = 0
BLAST of Tan0018358 vs. TAIR 10
Match: AT1G19080.2 (GINS complex protein ) HSP 1 Score: 253.8 bits (647), Expect = 1.0e-67 Identity = 126/184 (68.48%), Postives = 144/184 (78.26%), Query Frame = 0
BLAST of Tan0018358 vs. TAIR 10
Match: AT3G55490.1 (GINS complex protein ) HSP 1 Score: 253.8 bits (647), Expect = 1.0e-67 Identity = 126/184 (68.48%), Postives = 144/184 (78.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|