Tan0018358 (gene) Snake gourd v1

Overview
NameTan0018358
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA replication complex GINS protein PSF3-like
LocationLG11: 2186140 .. 2190139 (+)
RNA-Seq ExpressionTan0018358
SyntenyTan0018358
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAGAACTCAGCCCTTCATCTTCCTCTCTCACTCTCACGTGCTCCACCTTCTTCTTCTTCATCACGCCGTGTCCTCCTCCGTTTCAGCAGCTCAGTGTCGCCGCCGGCCGTCTTTCTTCCGCTTGTGCCGCCGTAGCCTCCTCTAGCAGGATTACACTGATTTTCTACTCTCTTATTTTTACTGGTATTCTCCCCATCTCCACCTATCTCTTTCTTCTCATTTTGAAAACACAAATTAGGGCTTATTTAATCAAAAAATGGAGGAGATGTTTTTGCTTTCATATATATTTTTTTAATTTCTTTTTAATAAAAAACAATAGCCGAAAGAAAATAAAAATCATCGGTCCAAACGAACCCTCTGATTGGATCGTTGTGATTACTGATTGACTCAAATCCCATCTAAACCGTTCGTTTATTTCGGTTGCAGAGTCTTTTATGCTACATCCGGACACACCCAATCAAAACCTGTCTTCCAGATCTTGCGATGAAAATTTTGAGTTTCCCTCCAATTCAAAGTTCATCGCTTTCACTGAAATTTTGATTAAATCAATGTTTGGAAAGTCTGCGCCTCAATCTCCTTCCTCAACCTCGCTTTCTTTCGCGAATTCACCATTTGCATATCTTCTTTCTCATCCCAAATCTTCGCCAATTCTCAATCCAGGGTGCCGCTCTACCCGTCTGTTGAATTATTATTTATTCTATATAGTTTTTTGTTTTGTTCTTGATTGTTTTTTAATTTCGTCTCATTTTCATTTCTGTATGCTAGTGCGTTATTTGGTGTAGTTTGTGTATGTATTCTCAGAAATTCGTATTATGTTTCAATTTTTCATTCTAGTGGCCGAATGCAAAAGCTGTTTATAATTTTCTATTGTTGCAATTAAGTTGCGAATTTCCACATTCATTGATTGGATTCTTTTTTTTTTTTACAAAAAGGAGTTCCTTAGTATTCCCACCGAGAAGTAAATATAAGTTTTTAATTTGGAGGTGAGTCGTTTTTGAAAGATTTGAAGGTCTCTGCGTAATGCATATTTTACTCTTTAGGTTTTTCTGTACTTTGCCTTCTAGTTTTACAATTCGTTTTCAGTTTTTTAATATCAGAGAAACATTCTTGGTTTCCTCAATAGTTTGACTGTTTTAACTCTCATTACATTTCTCGCAGTTCCAGTAAACATTTTACTGTAGAAGTAGGTGGTGCCAGTTGAAAATATATCATGGTGGAAGTTGAGTAATTTCTTCTAGGGGCATTGAACTTTGGAGCAACGTGTTGAATACCCTAAAAGATGACAAATTATTATGATATTGATGACATTCTGGCGGAGGAAGAGGTCAATATCTTATCCTTTTACCTGATAAGGTCTTATAAACTTGCAAGCTCATTATCGAGTCTTGTTTTGTCCTCTTGACAGCTTGTCTCCGTTGTGTTCCAAAAGGCGGTTAATGGAGTTGGAATCGATCCCAGTTCTGAAACAGATTCTGTAAGTTCCAGGGATTAGTAGGAGATATGATATGGATGTTGAATGGCAAACTTACGTTTTTTATTTGGTGTAATTTCAGGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTTGCGAAAGAGCTGCATCTTAGACAAGTGGCGGTTATGAGCTTACCTGCTTGTTTTAACCAAAGGTAGCAATAGCCATTACATTCAGGCTCTGCATACGACCAATAATTTCCATAAACTTGTAGTGTTCTAGACTTTTTGGGAACATAGTTGAATGAGGATCTTTTTTATTACGCCCCCACTTACTCCCTAAACACTTACCCGCATAGACACTGAATTTTGATTCTCTTTCTTCTAATTTTGCGATTGCATTCATGCACAATTTCCTTACTTTCTTTTCACCTGCTAATTGCTTTACAAGCAGAAACGTCTGAACTGGAATCTCCAGAGTAGAGGAATTAGTCGGATTTAATGAGGTCATTTTAAAGTTATTGGTGTTCTTATTTTTAATTTAAGAACTACTCTTTTTTGTGTGTTATTACTTTTTTTTTAGGAACTACTCTTCTGGCTTGCTCATGAATCACATTGGAGACAAGTGATGTTACTGGCATTGTCTTCTAGTTTCATCAATTAAAACGAAAATAATGGCTATTACTTGATTACTCTGCCTGATCTATCATGGCCATGAAATTGTAGTATTCCAAACCTTTTGAGATTTAGTTTATAGAATCTCATTTAGAATGCTCCCACTTGCTCCGTAGAAGCTGACCCACAAAGAAAATGTTTTTTCCTTTGTGTTACGAACCTGTTTGTGGTTCAATCTTTTCATGTGCTAACTATTTATTACCAGCAGAAACTTCCTGCCCTAGAATTTCAAGATTAAAGGAATCAGTAAGACGTGGATAATGATATTTATTCTTATCCCAAAAAACAAGAAAAGATGATGATATGTATAGTTGACTAGTGCTCTTGTTCTCTAACCAGAACACGACTGGAAATTCAGGCGGATGCTGCATTTGTTGATCTACGATCTAGATGTCAATACTTCTATGAATTTGGATGCAAGATTGCACCACTGTGAGTATCTGGAGATCCAACTCTTTTTGTTTATCAGATTTTTTTTTTTAAATATTCGTGAGAGCTCATGCTCACATTGTGGACTTCAATTTTTCCTACAATCCAACCGTCTGAACCTACTACATTGGGTTGCCAAGATAACTCATAGGATATTAAATCCTAAGTAAGTGGCCACCATGGATTTACCACAGTTCTTCTATGAGGAGAAAATTTTATACTGCTGCTTTGTCCATTATTTTAGCTGATGTCATACTTATATCTATTTGAAAGTGAAAGTGAGTAAGTGCATTTTCATTTGAAACACATTTGTACTCGAATAAGCAATTGCTTGTTTTTACCTTTGACAGTAGTACCATTCTGAAGGCACGGCATTACCATTCTGAAGGCACGGCATTAAACAGATCTTTTTGTAAACGTAATAATTAGGACATCTAGCCAGAAGACTACTTTTTTACTGCTGTCTAAATGACATATGAAATGATTAATTAAAGCTTGTATATATTAAGCATGTTGGTTGGACATCCTACTAAGGACTAAAGATTTTGCATTTAGGCTTGAACTCTTGGAAGTATTTTATGATAATCTGGCTAGCATGTCTGCATCTCAAGTTTTGCATCTCAATGAATAGCAGTCTCATTTTCATTCCATTGTAGATGTAGACTGATAAATATGCATAAAGATTCAAAACTGACTATCTAACCCCTTTCTACATATGGAGTATATCTTGTAAAAAGTGTGTTTGTTGCCTTGATCTCGTGCATGTAGGATGTCTGTTTTGTTGGAGTGTGCTCTACCAAATCGCTGTTAGTAATATTTGGTACCTAAATGGACGAGAATGTAAAAGATTGAATGCTATTAATTCTCATTTTTTCTTTCGCAAACTTCGACGACAGGGTTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGTAGGTACAAGGAAGTTCTTACCAAGGCTCACACTGCAGTATTTGCTGCAAGTTCTAAATACTTGACAGTTCTATCAAAAGAAGAAACCAAAAGTGAGATTTTTTGTTACATGTTTTGTCTGTCCTCTTGTTTTCATATTTCGTGCTTCTCTTCAAACTCACATCAATATAATCCTTGTGTGCAGTGTATGAGGCAGCTCAATCCTCTATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCGTAGATTTCAGAAAGCATCCTTTCTTGGGGGGAAGAGGAAGTCTTCAGAGTAGGCACTTAATTCGAGCTTAAATGTATTATATTTTCACCCTTTGTTGCATGAGCAAATAAAATAATGTAGAATTCTGCATGCCCCTTCCTGGAAAAGTATTAATTTTTCATTGTTTCCATTTTCAAAGGTTCTAATTTATTCACCATTTGTGGGGTAGGGAGTTTAACCTCTAACATTTTGATTAAAAATGAGAATATATATGCTTATATTATTTT

mRNA sequence

AAAAAAAGAACTCAGCCCTTCATCTTCCTCTCTCACTCTCACGTGCTCCACCTTCTTCTTCTTCATCACGCCGTGTCCTCCTCCGTTTCAGCAGCTCAGTGTCGCCGCCGGCCGTCTTTCTTCCGCTTGTGCCGCCGTAGCCTCCTCTAGCAGGATTACACTGATTTTCTACTCTCTTATTTTTACTGTTCCAGTAAACATTTTACTGTAGAAGTAGGTGGTGCCAGTTGAAAATATATCATGGTGGAAGTTGAGTAATTTCTTCTAGGGGCATTGAACTTTGGAGCAACGTGTTGAATACCCTAAAAGATGACAAATTATTATGATATTGATGACATTCTGGCGGAGGAAGAGCTTGTCTCCGTTGTGTTCCAAAAGGCGGTTAATGGAGTTGGAATCGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTTGCGAAAGAGCTGCATCTTAGACAAGTGGCGGTTATGAGCTTACCTGCTTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCGGATGCTGCATTTGTTGATCTACGATCTAGATGTCAATACTTCTATGAATTTGGATGCAAGATTGCACCACTGGTTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGTAGGTACAAGGAAGTTCTTACCAAGGCTCACACTGCAGTATTTGCTGCAAGTTCTAAATACTTGACAGTTCTATCAAAAGAAGAAACCAAAATGTATGAGGCAGCTCAATCCTCTATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCGTAGATTTCAGAAAGCATCCTTTCTTGGGGGGAAGAGGAAGTCTTCAGAGTAGGCACTTAATTCGAGCTTAAATGTATTATATTTTCACCCTTTGTTGCATGAGCAAATAAAATAATGTAGAATTCTGCATGCCCCTTCCTGGAAAAGTATTAATTTTTCATTGTTTCCATTTTCAAAGGTTCTAATTTATTCACCATTTGTGGGGTAGGGAGTTTAACCTCTAACATTTTGATTAAAAATGAGAATATATATGCTTATATTATTTT

Coding sequence (CDS)

ATGACAAATTATTATGATATTGATGACATTCTGGCGGAGGAAGAGCTTGTCTCCGTTGTGTTCCAAAAGGCGGTTAATGGAGTTGGAATCGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTTGCGAAAGAGCTGCATCTTAGACAAGTGGCGGTTATGAGCTTACCTGCTTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCGGATGCTGCATTTGTTGATCTACGATCTAGATGTCAATACTTCTATGAATTTGGATGCAAGATTGCACCACTGGTTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGTAGGTACAAGGAAGTTCTTACCAAGGCTCACACTGCAGTATTTGCTGCAAGTTCTAAATACTTGACAGTTCTATCAAAAGAAGAAACCAAAATGTATGAGGCAGCTCAATCCTCTATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCGTAGATTTCAGAAAGCATCCTTTCTTGGGGGGAAGAGGAAGTCTTCAGAGTAG

Protein sequence

MTNYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQVAVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMGGRRFQKASFLGGKRKSSE
Homology
BLAST of Tan0018358 vs. ExPASy Swiss-Prot
Match: Q7ZT01 (DNA replication complex GINS protein PSF3 OS=Xenopus laevis OX=8355 GN=gins3 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-14
Identity = 48/170 (28.24%), Postives = 83/170 (48.82%), Query Frame = 0

Query: 3   NYYDIDDILAEEELVSVVFQKAVNGVG-IDPSSETDSVESGSKVELPFWLAKELH--LRQ 62
           N+  ++D+L  +E +    +     +G +D   ++DS+  GSK+ELP WLAK L+   R+
Sbjct: 17  NFLSLEDLLMSQEKLPCCIESGFPRLGFLDKGGDSDSIPEGSKMELPLWLAKGLYDNKRR 76

Query: 63  VAVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRT--IGSWLLSTF 122
           V  + LP  + +  R    ADA  VDL     ++Y FG ++          I   +L TF
Sbjct: 77  VLSVELPKIYREGWRTVFSADANVVDLHKMGPHYYGFGSQLLNFDSPENPEIAKTILQTF 136

Query: 123 KSRYKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMG 168
             R++ ++  +  A    +S  +  L + E  ++ A Q  + AF+ W  G
Sbjct: 137 VGRFRRIMDSSQNAYNEDTSGLVARLDELERSLFRAGQRGLNAFQSWERG 186

BLAST of Tan0018358 vs. ExPASy Swiss-Prot
Match: Q4WQ54 (DNA replication complex GINS protein psf3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=psf3 PE=3 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 6.5e-14
Identity = 44/170 (25.88%), Postives = 83/170 (48.82%), Query Frame = 0

Query: 3   NYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHL----- 62
           +YYD+D IL + + +   F+  V G+GI   +  + +++G++++LP WL   L +     
Sbjct: 2   SYYDVDSILTDSQKLPCTFELEVPGLGILEGNPGEDIKAGTRIDLPLWLGVMLSIGARLG 61

Query: 63  -RQVAVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLST 122
             ++  + LP+  + R    ++AD   VDLRS   +FY    ++  L  +  +   L++T
Sbjct: 62  TSRLVTLDLPSALSDRVVNALKADPRTVDLRSLAPHFYSLSERVLDLFEEEEMVDVLINT 121

Query: 123 FKSRYKEVLTKAHT--AVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKW 165
           FK R  E+   AH         + +L  L + E +++  A  S    + W
Sbjct: 122 FKKRAAEIADHAHNPKGALGEGADFLRGLDETERQLFRVAHDSARETRIW 171

BLAST of Tan0018358 vs. ExPASy Swiss-Prot
Match: Q9BRX5 (DNA replication complex GINS protein PSF3 OS=Homo sapiens OX=9606 GN=GINS3 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.0e-12
Identity = 51/175 (29.14%), Postives = 83/175 (47.43%), Query Frame = 0

Query: 3   NYYDIDDILAEEELVSVVFQKAVNGVGI-----DPSSETD-SVESGSKVELPFWLAKEL- 62
           N+  +DDIL   E + V  + A+  +G         +ETD +V  GSK+ELP WLAK L 
Sbjct: 18  NFLSLDDILMSHEKLPVRTETAMPRLGAFFLERSAGAETDNAVPQGSKLELPLWLAKGLF 77

Query: 63  -HLRQVAVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVG--DRTIGSW 122
            + R++  + LP  + +  R    AD   VDL     +FY FG ++       +  I   
Sbjct: 78  DNKRRILSVELPKIYQEGWRTVFSADPNVVDLHKMGPHFYGFGSQLLHFDSPENADISQS 137

Query: 123 LLSTFKSRYKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMG 168
           LL TF  R++ ++  +  A    +S  +  L + E  +++  Q  +  F+ W  G
Sbjct: 138 LLQTFIGRFRRIMDSSQNAYNEDTSALVARLDEMERGLFQTGQKGLNDFQCWEKG 192

BLAST of Tan0018358 vs. ExPASy Swiss-Prot
Match: Q5RDV0 (DNA replication complex GINS protein PSF3 OS=Pongo abelii OX=9601 GN=GINS3 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.0e-12
Identity = 51/175 (29.14%), Postives = 84/175 (48.00%), Query Frame = 0

Query: 3   NYYDIDDILAEEELVSVVFQKAVNGVGI-----DPSSETD-SVESGSKVELPFWLAKEL- 62
           N+  +DDIL   E + V  + A+  +G         +ETD +V  GSK+ELP WLAK L 
Sbjct: 18  NFLSLDDILMSHEKLPVRTETAMPRLGAFFLERSAGAETDNAVPQGSKLELPLWLAKGLF 77

Query: 63  -HLRQVAVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVG--DRTIGSW 122
            + R++  + LP  + +  R    AD   VDL     +FY FG ++       +  I   
Sbjct: 78  DNKRRILSVELPKIYQEGWRTVFSADPNVVDLHKMGPHFYGFGSQLLHFDSPENADISQS 137

Query: 123 LLSTFKSRYKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMG 168
           LL TF  R++ ++  +  A    +S  +  L + E  +++  Q+ +  F+ W  G
Sbjct: 138 LLQTFIGRFRRIMDSSQNAYNEDTSALVARLDEMERGLFQIGQNGLNDFQCWEKG 192

BLAST of Tan0018358 vs. ExPASy Swiss-Prot
Match: Q9UTC3 (DNA replication complex GINS protein psf3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=psf3 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.0e-12
Identity = 41/118 (34.75%), Postives = 65/118 (55.08%), Query Frame = 0

Query: 3   NYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQVAV 62
           +YYDID IL+E + V      ++ G+G     E   V +GSKVELPFWLA+ L +     
Sbjct: 2   DYYDIDSILSENQKVPCTSTVSIPGLG----HEGRMVPTGSKVELPFWLAEVLAINSFVS 61

Query: 63  MSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 121
           + +PA F+   R  ++A+   V +R    ++Y F  K+  L+ D ++    L+T +SR
Sbjct: 62  IHMPAPFSSVVRNALKANPNSVSIRDITTHYYHFAEKMLHLISDDSLVQISLNTLRSR 115

BLAST of Tan0018358 vs. NCBI nr
Match: XP_022990174.1 (DNA replication complex GINS protein PSF3-like [Cucurbita maxima] >XP_022990175.1 DNA replication complex GINS protein PSF3-like [Cucurbita maxima] >XP_022990176.1 DNA replication complex GINS protein PSF3-like [Cucurbita maxima])

HSP 1 Score: 346.7 bits (888), Expect = 1.3e-91
Identity = 178/185 (96.22%), Postives = 180/185 (97.30%), Query Frame = 0

Query: 1   MTNYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MTNYYDIDDILAEEELVSV+FQKAVNGV IDPSSETDSVESGSKVELPFWLAKELHLRQV
Sbjct: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVM LPACFNQRTRLEIQADAAFVDLRSR QYFYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMGGRRFQKASFLGGK 180
           YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWR+GG RFQKASFLG K
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 186
           RKSSE
Sbjct: 181 RKSSE 185

BLAST of Tan0018358 vs. NCBI nr
Match: XP_022962205.1 (DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_022962214.1 DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_022962222.1 DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_023549787.1 DNA replication complex GINS protein PSF3-like [Cucurbita pepo subsp. pepo] >XP_023549796.1 DNA replication complex GINS protein PSF3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.5 bits (885), Expect = 2.8e-91
Identity = 177/185 (95.68%), Postives = 180/185 (97.30%), Query Frame = 0

Query: 1   MTNYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MTNYYDIDDILAEEELVSV+FQKAVNGV IDPSSETDSVESGSKVELPFWLAKELHLRQV
Sbjct: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVM LPACFNQRTRLEIQADAAFVDLRSR QYFYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMGGRRFQKASFLGGK 180
           YKEVLTKAHTAVFAASSKYLT+LSKEETKMYEAAQSSMTAFKKWR+GG RFQKASFLG K
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 186
           RKSSE
Sbjct: 181 RKSSE 185

BLAST of Tan0018358 vs. NCBI nr
Match: KAG6602618.1 (hypothetical protein SDJN03_07851, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 344.4 bits (882), Expect = 6.3e-91
Identity = 176/185 (95.14%), Postives = 180/185 (97.30%), Query Frame = 0

Query: 1   MTNYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MTNYYDIDDILA+EELVSV+FQKAVNGV IDPSSETDSVESGSKVELPFWLAKELHLRQV
Sbjct: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVM LPACFNQRTRLEIQADAAFVDLRSR QYFYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMGGRRFQKASFLGGK 180
           YKEVLTKAHTAVFAASSKYLT+LSKEETKMYEAAQSSMTAFKKWR+GG RFQKASFLG K
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 186
           RKSSE
Sbjct: 181 RKSSE 185

BLAST of Tan0018358 vs. NCBI nr
Match: XP_038885801.1 (DNA replication complex GINS protein PSF3-like [Benincasa hispida] >XP_038885802.1 DNA replication complex GINS protein PSF3-like [Benincasa hispida])

HSP 1 Score: 341.3 bits (874), Expect = 5.3e-90
Identity = 173/185 (93.51%), Postives = 180/185 (97.30%), Query Frame = 0

Query: 1   MTNYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MT+YYD+DDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLA+ELHLRQV
Sbjct: 5   MTSYYDLDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 64

Query: 61  AVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVM+LP+CFNQRTRLEIQADAAFVDLRSRC +FYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 65  AVMALPSCFNQRTRLEIQADAAFVDLRSRCPFFYEFGCKIAPLVGDRTIGSWLLSTFKSR 124

Query: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMGGRRFQKASFLGGK 180
           YKEVLTKAHTAVFAASSKYLT+LS EETKMYEAAQSSMTAFKKWRMGG RFQKASFL  K
Sbjct: 125 YKEVLTKAHTAVFAASSKYLTLLSNEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLSRK 184

Query: 181 RKSSE 186
           RKSSE
Sbjct: 185 RKSSE 189

BLAST of Tan0018358 vs. NCBI nr
Match: XP_008441464.1 (PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo] >XP_008441465.1 PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo])

HSP 1 Score: 340.5 bits (872), Expect = 9.1e-90
Identity = 172/185 (92.97%), Postives = 181/185 (97.84%), Query Frame = 0

Query: 1   MTNYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MT+YYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLA+ELHLRQV
Sbjct: 1   MTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 60

Query: 61  AVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVM+LP+CFNQRTRLEIQADAAFVDLRSRCQ+FYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMGGRRFQKASFLGGK 180
           YKEVLTKAH+AVFAASSKYL +LSKEETKMYEAAQSSMTAFKKWRMGG RFQ+ASFL  K
Sbjct: 121 YKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRK 180

Query: 181 RKSSE 186
           RKS+E
Sbjct: 181 RKSTE 185

BLAST of Tan0018358 vs. ExPASy TrEMBL
Match: A0A6J1JM79 (DNA replication complex GINS protein PSF3-like OS=Cucurbita maxima OX=3661 GN=LOC111487145 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.1e-92
Identity = 178/185 (96.22%), Postives = 180/185 (97.30%), Query Frame = 0

Query: 1   MTNYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MTNYYDIDDILAEEELVSV+FQKAVNGV IDPSSETDSVESGSKVELPFWLAKELHLRQV
Sbjct: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVM LPACFNQRTRLEIQADAAFVDLRSR QYFYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMGGRRFQKASFLGGK 180
           YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWR+GG RFQKASFLG K
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 186
           RKSSE
Sbjct: 181 RKSSE 185

BLAST of Tan0018358 vs. ExPASy TrEMBL
Match: A0A6J1HEE0 (DNA replication complex GINS protein PSF3-like OS=Cucurbita moschata OX=3662 GN=LOC111462725 PE=3 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.4e-91
Identity = 177/185 (95.68%), Postives = 180/185 (97.30%), Query Frame = 0

Query: 1   MTNYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MTNYYDIDDILAEEELVSV+FQKAVNGV IDPSSETDSVESGSKVELPFWLAKELHLRQV
Sbjct: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVM LPACFNQRTRLEIQADAAFVDLRSR QYFYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMGGRRFQKASFLGGK 180
           YKEVLTKAHTAVFAASSKYLT+LSKEETKMYEAAQSSMTAFKKWR+GG RFQKASFLG K
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 186
           RKSSE
Sbjct: 181 RKSSE 185

BLAST of Tan0018358 vs. ExPASy TrEMBL
Match: A0A1S3B3H3 (DNA replication complex GINS protein PSF3-like OS=Cucumis melo OX=3656 GN=LOC103485572 PE=3 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.4e-90
Identity = 172/185 (92.97%), Postives = 181/185 (97.84%), Query Frame = 0

Query: 1   MTNYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MT+YYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLA+ELHLRQV
Sbjct: 1   MTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 60

Query: 61  AVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVM+LP+CFNQRTRLEIQADAAFVDLRSRCQ+FYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMGGRRFQKASFLGGK 180
           YKEVLTKAH+AVFAASSKYL +LSKEETKMYEAAQSSMTAFKKWRMGG RFQ+ASFL  K
Sbjct: 121 YKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRK 180

Query: 181 RKSSE 186
           RKS+E
Sbjct: 181 RKSTE 185

BLAST of Tan0018358 vs. ExPASy TrEMBL
Match: A0A5A7UGU7 (DNA replication complex GINS protein PSF3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G002360 PE=3 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.4e-90
Identity = 172/185 (92.97%), Postives = 181/185 (97.84%), Query Frame = 0

Query: 1   MTNYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MT+YYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLA+ELHLRQV
Sbjct: 23  MTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 82

Query: 61  AVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVM+LP+CFNQRTRLEIQADAAFVDLRSRCQ+FYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 83  AVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSR 142

Query: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMGGRRFQKASFLGGK 180
           YKEVLTKAH+AVFAASSKYL +LSKEETKMYEAAQSSMTAFKKWRMGG RFQ+ASFL  K
Sbjct: 143 YKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRK 202

Query: 181 RKSSE 186
           RKS+E
Sbjct: 203 RKSTE 207

BLAST of Tan0018358 vs. ExPASy TrEMBL
Match: A0A0A0K8J6 (Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G011640 PE=3 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.2e-89
Identity = 171/185 (92.43%), Postives = 180/185 (97.30%), Query Frame = 0

Query: 1   MTNYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MT+YYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLA+ELHLRQV
Sbjct: 5   MTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 64

Query: 61  AVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVM+LP+CFNQRTRLEIQADAAFVDLRSRCQ+FYEFGCKIAPLVGDRTIGSWLLST KSR
Sbjct: 65  AVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTLKSR 124

Query: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMGGRRFQKASFLGGK 180
           YKEVLTKAH+AVFAASSKYL +LSKEETKMYEAAQSSMTAFKKWRMGG RFQ+ASFL  K
Sbjct: 125 YKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRK 184

Query: 181 RKSSE 186
           RKS+E
Sbjct: 185 RKSTE 189

BLAST of Tan0018358 vs. TAIR 10
Match: AT1G19080.1 (GINS complex protein )

HSP 1 Score: 253.8 bits (647), Expect = 1.0e-67
Identity = 126/184 (68.48%), Postives = 144/184 (78.26%), Query Frame = 0

Query: 1   MTNYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           M  Y+DIDDIL EEE V V+F K  NGV IDPS+ET+  E GSKVELPFWLA ELHLRQ 
Sbjct: 1   MAKYFDIDDILIEEEFVPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQA 60

Query: 61  AVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
             ++LP CF+Q+TRLE+QADAA+VDLRSRC YFYEFGCKI PLV DRT+G  L + FK R
Sbjct: 61  VTINLPPCFDQKTRLEVQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMGGRRFQKASFLGGK 180
           YKE LTK +TA    +SKYL+ L+KEET +YEAA  SMTAFKKWR GG RFQ+AS LG K
Sbjct: 121 YKEALTKVYTAAHITASKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRK 180

Query: 181 RKSS 185
           RK S
Sbjct: 181 RKDS 184

BLAST of Tan0018358 vs. TAIR 10
Match: AT1G19080.2 (GINS complex protein )

HSP 1 Score: 253.8 bits (647), Expect = 1.0e-67
Identity = 126/184 (68.48%), Postives = 144/184 (78.26%), Query Frame = 0

Query: 1   MTNYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           M  Y+DIDDIL EEE V V+F K  NGV IDPS+ET+  E GSKVELPFWLA ELHLRQ 
Sbjct: 1   MAKYFDIDDILIEEEFVPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQA 60

Query: 61  AVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
             ++LP CF+Q+TRLE+QADAA+VDLRSRC YFYEFGCKI PLV DRT+G  L + FK R
Sbjct: 61  VTINLPPCFDQKTRLEVQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMGGRRFQKASFLGGK 180
           YKE LTK +TA    +SKYL+ L+KEET +YEAA  SMTAFKKWR GG RFQ+AS LG K
Sbjct: 121 YKEALTKVYTAAHITASKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRK 180

Query: 181 RKSS 185
           RK S
Sbjct: 181 RKDS 184

BLAST of Tan0018358 vs. TAIR 10
Match: AT3G55490.1 (GINS complex protein )

HSP 1 Score: 253.8 bits (647), Expect = 1.0e-67
Identity = 126/184 (68.48%), Postives = 144/184 (78.26%), Query Frame = 0

Query: 1   MTNYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           M  Y+DIDDIL EEE V V+F K  NGV IDPS+ET+  E GSKVELPFWLA ELHLRQ 
Sbjct: 1   MAKYFDIDDILIEEEFVPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQA 60

Query: 61  AVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
             ++LP CF+Q+TRLE+QADAA+VDLRSRC YFYEFGCKI PLV DRT+G  L + FK R
Sbjct: 61  VTINLPPCFDQKTRLEVQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMGGRRFQKASFLGGK 180
           YKE LTK +TA    +SKYL+ L+KEET +YEAA  SMTAFKKWR GG RFQ+AS LG K
Sbjct: 121 YKEALTKVYTAAHITASKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRK 180

Query: 181 RKSS 185
           RK S
Sbjct: 181 RKDS 184

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q7ZT011.3e-1428.24DNA replication complex GINS protein PSF3 OS=Xenopus laevis OX=8355 GN=gins3 PE=... [more]
Q4WQ546.5e-1425.88DNA replication complex GINS protein psf3 OS=Neosartorya fumigata (strain ATCC M... [more]
Q9BRX56.0e-1229.14DNA replication complex GINS protein PSF3 OS=Homo sapiens OX=9606 GN=GINS3 PE=1 ... [more]
Q5RDV06.0e-1229.14DNA replication complex GINS protein PSF3 OS=Pongo abelii OX=9601 GN=GINS3 PE=2 ... [more]
Q9UTC36.0e-1234.75DNA replication complex GINS protein psf3 OS=Schizosaccharomyces pombe (strain 9... [more]
Match NameE-valueIdentityDescription
XP_022990174.11.3e-9196.22DNA replication complex GINS protein PSF3-like [Cucurbita maxima] >XP_022990175.... [more]
XP_022962205.12.8e-9195.68DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_02296221... [more]
KAG6602618.16.3e-9195.14hypothetical protein SDJN03_07851, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038885801.15.3e-9093.51DNA replication complex GINS protein PSF3-like [Benincasa hispida] >XP_038885802... [more]
XP_008441464.19.1e-9092.97PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo] >XP_008... [more]
Match NameE-valueIdentityDescription
A0A6J1JM796.1e-9296.22DNA replication complex GINS protein PSF3-like OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1HEE01.4e-9195.68DNA replication complex GINS protein PSF3-like OS=Cucurbita moschata OX=3662 GN=... [more]
A0A1S3B3H34.4e-9092.97DNA replication complex GINS protein PSF3-like OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A5A7UGU74.4e-9092.97DNA replication complex GINS protein PSF3-like OS=Cucumis melo var. makuwa OX=11... [more]
A0A0A0K8J62.2e-8992.43Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G011640 PE=3 S... [more]
Match NameE-valueIdentityDescription
AT1G19080.11.0e-6768.48GINS complex protein [more]
AT1G19080.21.0e-6768.48GINS complex protein [more]
AT3G55490.11.0e-6768.48GINS complex protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021151GINS subunit, domain APFAMPF05916Sld5coord: 45..148
e-value: 3.1E-9
score: 37.3
IPR038437GINS complex, subunit Psf3 superfamilyGENE3D1.20.58.2050coord: 1..167
e-value: 8.5E-52
score: 177.4
IPR010492GINS complex, subunit Psf3PANTHERPTHR22768UNCHARACTERIZEDcoord: 1..184
NoneNo IPR availableCDDcd11713GINS_A_psf3coord: 65..167
e-value: 3.28923E-29
score: 102.344
NoneNo IPR availableSUPERFAMILY160059PriA/YqbF domaincoord: 1..66
IPR036224GINS, helical bundle-like domain superfamilySUPERFAMILY158573GINS helical bundle-likecoord: 65..166

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0018358.1Tan0018358.1mRNA
Tan0018358.2Tan0018358.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902975 mitotic DNA replication initiation
cellular_component GO:0000811 GINS complex