Tan0018201 (gene) Snake gourd v1

Overview


Name	Tan0018201
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Location	LG02: 67149737 .. 67151758 (-)
RNA-Seq Expression	Tan0018201
Synteny	Tan0018201

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAGAAGAGTTTCTCCTCATGTACGCCTTATAGATGTCCAGCTCACTGTGTTAAGTTTAAAGTGTTCCATATGCGAACATAGTTTGTTTTCAGGTAAAGTAGTGTCAGCAGGTATTGTTAAGAGGTAACAATGTCTGTTGGCTTCATGCCGTCTCCCGGGCTAAGTTAGCAAGTGGTTCGGGAGGGGGTGTGACATATATTGATAGACTTAGGTAAAATCATTAGCCGGAGTTGACCTAGGTAAATTTCCTAAAACACTTAAAGTACTTAGTGGGAGGAAAATGGTGTATATGATACATCGATTTTTTCACCTACATATCTTCGAAAAATTCACACCGTGAGATCCATACTTGGCCTTGTGGCGCAAACGGGAGCGCCCTCCTTCGGATAGTGTATGTATGGGTCAATATCAAGGTCAATTGAGAGGGTACTTATAGTGAGTGGGAGCAGGAATTATGAGAAAAAAATCCACGATCTCTTCTATCGGTTCACACCATGAGATCGCTATGATTAGCCTGCTAGTTTGGCCTAGACCAGATAATCCCTTCGGAGGGCTTTGATCATAGGGATCAGAACATAGTAAACACTTGAAAAGGATAAAGTTTACCTTAGTCTATTTTCCAACCTAGTCCTCCCTTCGACGAATTTTGTTGGATCAGGACTCTGGAATCTAAAGATAGAGGGTTACACTCACGGGATACATCAGTTGTGAATAATGAGGAATAAGAGTTATTCTGGCATTAGGTTTTTATCAAGAATGTCTTGATCCAAAGGAGGAATGTTTTTTATTACTCTTTGGTGTCATACATTCTAAACCTTTAGACTATCATTGCAAATTATTAATGACCTAGGAATCATGAAATAATTAGTCAAAACTGATTGGATAAAGGGTTTAGCGAAATGAATAGCTCAGTAATTTTCTTGTTGGCTACCGAGAAATTAACCAGGGAAAACTTGATGACTTGGAAAGACAACCTTAACATTATCTTGGTAGCATACAATCTTAAGTTTGTGCTTACTGAGGAGTGTCCTCAGGTACCAAGCTCGAATGCAACACGAAGTGTTTGTGATGCATACAATAGATGGATCAAGGCTAATGATAAGGCCAAGGTCTACATCTTGGCAAGAATGTCTGACATACTAGACAAGAAGCACAAGGGCATGATGACCGCTAAGGAAATCATGGATTCGTTGCAAGGAATGTTCGGACACCAGTCTGTTCAGGTCAGGCACAATGCCCTTAAGTACATCTTCAATGTTAGAATGGTGGAGGGATCATCTGTTCGGGATCATGTTCTCGATATGATGGTTCACTTCAACTCGGTGGGGTCGAATGGTGCTTCTATCGATGAATCGAGTCAGGGCTGCTTTAAATTAGAAACTCTTCCAGAGAATTTTCTACAGTTTCAAAGTAATGTTGTTATGAACAAGCTTATTTTTAACATTACAACCCTTCTAAATGAACTCCAAACCTTCCAATTTCTGATGAAAATCAAGGGATCGAAAGTTGAGGCAAATGTTGCCAGTAGGAGTTATCATAGAGGTTCAACCTCCGTAACAAAATCAGTGGCTTCATCTTCGTCAACCCTGAAAGACAATAAGAAGAACATGAAGAAGGTTGCTAAGGGGAAACGGGATGACAAAGCTACCGCCCAAAAGGGCAAGAAGGTCAAAGAAGTTGTAGACAAAGGAAAATGTTTCCACTGCAATGAAGACGAACACTAGAAATGGAACTGTCTGAAGTACATTGCCAAAAACAAGAAAAAAGGTAAATATGATTTACTTTGCTTAAAAGCTTGTTTAGTGGATGATGATAACACTGCCTCCATATTGGATTCGGTTGCCACTAATCATGTATGTTCTTCTTTTCAGGGAATTAGTTCCTGGCAGCAAATACAAGAAGGAGAGATAACACTCCGTCTTGGAAATGAGGAAGTTGTCTCAGCTGTAGCAGTAGGCACGATGAAACTGTTGTTTGGCAAGAAACATATGTTGTTAGACAATTTATTAGTGATACCAGG

mRNA sequence

TTAAGAAGAGTTTCTCCTCATGTACGCCTTATAGATGTCCAGCTCACTGTGTTAAGTTTAAAGTGTTCCATATGCGAACATAGTTTGTTTTCAGGTAAAGTAGTGTCAGCAGGTATTGTTAAGAGGTAACAATGTCTGTTGGCTTCATGCCGTCTCCCGGGCTAAGTTAGCAAGTGGTTCGGGAGGGGGTGTGACATATATTGATAGACTTAGGTAAAATCATTAGCCGGAGTTGACCTAGGTAAATTTCCTAAAACACTTAAAGTACTTAGTGGGAGGAAAATGGTGTATATGATACATCGATTTTTTCACCTACATATCTTCGAAAAATTCACACCGTGAGATCCATACTTGGCCTTGTGGCGCAAACGGGAGCGCCCTCCTTCGGATAGTGTATGTATGGGTCAATATCAAGGTCAATTGAGAGGGTACTTATAGTGAGTGGGAGCAGGAATTATGAGAAAAAAATCCACGATCTCTTCTATCGGTTCACACCATGAGATCGCTATGATTAGCCTGCTAGTTTGGCCTAGACCAGATAATCCCTTCGGAGGGCTTTGATCATAGGGATCAGAACATAGTAAACACTTGAAAAGGATAAAGTTTACCTTAGTCTATTTTCCAACCTAGTCCTCCCTTCGACGAATTTTGTTGGATCAGGACTCTGGAATCTAAAGATAGAGGGTTACACTCACGGGATACATCAGTTGTGAATAATGAGGAATAAGAGTTATTCTGGCATTAGGTTTTTATCAAGAATGTCTTGATCCAAAGGAGGAATGTTTTTTATTACTCTTTGGTGTCATACATTCTAAACCTTTAGACTATCATTGCAAATTATTAATGACCTAGGAATCATGAAATAATTAGTCAAAACTGATTGGATAAAGGGTTTAGCGAAATGAATAGCTCAGTAATTTTCTTGTTGGCTACCGAGAAATTAACCAGGGAAAACTTGATGACTTGGAAAGACAACCTTAACATTATCTTGGTAGCATACAATCTTAAGTTTGTGCTTACTGAGGAGTGTCCTCAGGTACCAAGCTCGAATGCAACACGAAGTGTTTGTGATGCATACAATAGATGGATCAAGGCTAATGATAAGGCCAAGGTCTACATCTTGGCAAGAATGTCTGACATACTAGACAAGAAGCACAAGGGCATGATGACCGCTAAGGAAATCATGGATTCGTTGCAAGGAATGTTCGGACACCAGTCTGTTCAGGTCAGGCACAATGCCCTTAAGTACATCTTCAATGTTAGAATGGTGGAGGGATCATCTGTTCGGGATCATGTTCTCGATATGATGGTTCACTTCAACTCGGTGGGGTCGAATGGTGCTTCTATCGATGAATCGAGTCAGGGCTGCTTTAAATTAGAAACTCTTCCAGAGAATTTTCTACAGTTTCAAAGTAATGTTGTTATGAACAAGCTTATTTTTAACATTACAACCCTTCTAAATGAACTCCAAACCTTCCAATTTCTGATGAAAATCAAGGGATCGAAAGTTGAGGCAAATGTTGCCAGTAGGAGTTATCATAGAGGTTCAACCTCCGTAACAAAATCAGTGGCTTCATCTTCGTCAACCCTGAAAGACAATAAGAAGAACATGAAGAAGGTTGCTAAGGGGAAACGGGATGACAAAGCTACCGCCCAAAAGGGCAAGAAGGTCAAAGAAGTTGTAGACAAAGGAAAATGTTTCCACTGCAATGAAGACGAACACTAGAAATGGAACTGTCTGAAGTACATTGCCAAAAACAAGAAAAAAGGGAATTAGTTCCTGGCAGCAAATACAAGAAGGAGAGATAACACTCCGTCTTGGAAATGAGGAAGTTGTCTCAGCTGTAGCAGTAGGCACGATGAAACTGTTGTTTGGCAAGAAACATATGTTGTTAGACAATTTATTAGTGATACCAGG

Coding sequence (CDS)

ATGAATAGCTCAGTAATTTTCTTGTTGGCTACCGAGAAATTAACCAGGGAAAACTTGATGACTTGGAAAGACAACCTTAACATTATCTTGGTAGCATACAATCTTAAGTTTGTGCTTACTGAGGAGTGTCCTCAGGTACCAAGCTCGAATGCAACACGAAGTGTTTGTGATGCATACAATAGATGGATCAAGGCTAATGATAAGGCCAAGGTCTACATCTTGGCAAGAATGTCTGACATACTAGACAAGAAGCACAAGGGCATGATGACCGCTAAGGAAATCATGGATTCGTTGCAAGGAATGTTCGGACACCAGTCTGTTCAGGTCAGGCACAATGCCCTTAAGTACATCTTCAATGTTAGAATGGTGGAGGGATCATCTGTTCGGGATCATGTTCTCGATATGATGGTTCACTTCAACTCGGTGGGGTCGAATGGTGCTTCTATCGATGAATCGAGTCAGGGCTGCTTTAAATTAGAAACTCTTCCAGAGAATTTTCTACAGTTTCAAAGTAATGTTGTTATGAACAAGCTTATTTTTAACATTACAACCCTTCTAAATGAACTCCAAACCTTCCAATTTCTGATGAAAATCAAGGGATCGAAAGTTGAGGCAAATGTTGCCAGTAGGAGTTATCATAGAGGTTCAACCTCCGTAACAAAATCAGTGGCTTCATCTTCGTCAACCCTGAAAGACAATAAGAAGAACATGAAGAAGGTTGCTAAGGGGAAACGGGATGACAAAGCTACCGCCCAAAAGGGCAAGAAGGTCAAAGAAGTTGTAGACAAAGGAAAATGTTTCCACTGCAATGAAGACGAACACTAG

Protein sequence

MNSSVIFLLATEKLTRENLMTWKDNLNIILVAYNLKFVLTEECPQVPSSNATRSVCDAYNRWIKANDKAKVYILARMSDILDKKHKGMMTAKEIMDSLQGMFGHQSVQVRHNALKYIFNVRMVEGSSVRDHVLDMMVHFNSVGSNGASIDESSQGCFKLETLPENFLQFQSNVVMNKLIFNITTLLNELQTFQFLMKIKGSKVEANVASRSYHRGSTSVTKSVASSSSTLKDNKKNMKKVAKGKRDDKATAQKGKKVKEVVDKGKCFHCNEDEH

Homology

[Close]

BLAST of Tan0018201 vs. NCBI nr
Match: KAA0044955.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 295.4 bits (755), Expect = 5.0e-76
Identity = 159/276 (57.61%), Postives = 206/276 (74.64%), Query Frame = 0


Query: 1   MNSSVIFLLATEKLTRENLMTWKDNLNIILVAYNLKFVLTEECPQVPSSNATRSVCDAYN 60
           M S+ + +LA +KL   N  +WK+ +N +L+  +L+FVL EECPQVP++NATR+V + Y 
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKAKVYILARMSDILDKKHKGMMTAKEIMDSLQGMFGHQSVQVRHNALKYIFNV 120
           RW KAN+KA+ YILA +S++L KKH+ M+TA+EIMDSLQ MFG  S Q++H+ALKYI+N 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMVEGSSVRDHVLDMMVHFNSVGSNGASIDESSQGCFKLETLPENFLQFQSNVVMNKLIF 180
           RM EG+SVR+HVL+MMVHFN    NGA IDE+SQ  F LE+LPE+FLQF+SN VMNK+ +
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NITTLLNELQTFQFLMKIKGSKVEANVA--SRSYHRGSTSVTKSVASSSSTLKDNKKNMK 240
            +TTLLNELQTF+ LMKIKG K EANVA  +R +HRGSTS TKS+ SSS   K  K   K
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---K 240

Query: 241 KVAKGKRDDKATAQKGKKVKEVVDKGKCFHCNEDEH 275
           K  +G + + A A+  KK K    KG CFHCN++ H
Sbjct: 241 KGGQGNKANLAAAKTTKKAKAA--KGICFHCNQEGH 271

[Close]

BLAST of Tan0018201 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 295.4 bits (755), Expect = 5.0e-76
Identity = 159/276 (57.61%), Postives = 206/276 (74.64%), Query Frame = 0


Query: 1   MNSSVIFLLATEKLTRENLMTWKDNLNIILVAYNLKFVLTEECPQVPSSNATRSVCDAYN 60
           M S+ + +LA +KL   N  +WK+ +N +L+  +L+FVL EECPQVP++NATR+V + Y 
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKAKVYILARMSDILDKKHKGMMTAKEIMDSLQGMFGHQSVQVRHNALKYIFNV 120
           RW KAN+KA+ YILA +S++L KKH+ M+TA+EIMDSLQ MFG  S Q++H+ALKYI+N 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMVEGSSVRDHVLDMMVHFNSVGSNGASIDESSQGCFKLETLPENFLQFQSNVVMNKLIF 180
           RM EG+SVR+HVL+MMVHFN    NGA IDE+SQ  F LE+LPE+FLQF+SN VMNK+ +
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NITTLLNELQTFQFLMKIKGSKVEANVA--SRSYHRGSTSVTKSVASSSSTLKDNKKNMK 240
            +TTLLNELQTF+ LMKIKG K EANVA  +R +HRGSTS TKS+ SSS   K  K   K
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---K 240

Query: 241 KVAKGKRDDKATAQKGKKVKEVVDKGKCFHCNEDEH 275
           K  +G + + A A+  KK K    KG CFHCN++ H
Sbjct: 241 KGGQGNKANLAAAKTTKKTKAA--KGICFHCNQEGH 271

[Close]

BLAST of Tan0018201 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 295.4 bits (755), Expect = 5.0e-76
Identity = 159/276 (57.61%), Postives = 206/276 (74.64%), Query Frame = 0


Query: 1   MNSSVIFLLATEKLTRENLMTWKDNLNIILVAYNLKFVLTEECPQVPSSNATRSVCDAYN 60
           M S+ + +LA +KL   N  +WK+ +N +L+  +L+FVL EECPQVP++NATR+V + Y 
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKAKVYILARMSDILDKKHKGMMTAKEIMDSLQGMFGHQSVQVRHNALKYIFNV 120
           RW KAN+KA+ YILA +S++L KKH+ M+TA+EIMDSLQ MFG  S Q++H+ALKYI+N 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMVEGSSVRDHVLDMMVHFNSVGSNGASIDESSQGCFKLETLPENFLQFQSNVVMNKLIF 180
           RM EG+SVR+HVL+MMVHFN    NGA IDE+SQ  F LE+LPE+FLQF+SN VMNK+ +
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NITTLLNELQTFQFLMKIKGSKVEANVA--SRSYHRGSTSVTKSVASSSSTLKDNKKNMK 240
            +TTLLNELQTF+ LMKIKG K EANVA  +R +HRGSTS TKS+ SSS   K  K   K
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---K 240

Query: 241 KVAKGKRDDKATAQKGKKVKEVVDKGKCFHCNEDEH 275
           K  +G + + A A+  KK K    KG CFHCN++ H
Sbjct: 241 KGGQGNKANLAAAKTTKKAKAA--KGICFHCNQEGH 271

[Close]

BLAST of Tan0018201 vs. NCBI nr
Match: KAA0051952.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 295.4 bits (755), Expect = 5.0e-76
Identity = 159/276 (57.61%), Postives = 206/276 (74.64%), Query Frame = 0


Query: 1   MNSSVIFLLATEKLTRENLMTWKDNLNIILVAYNLKFVLTEECPQVPSSNATRSVCDAYN 60
           M S+ + +LA +KL   N  +WK+ +N +L+  +L+FVL EECPQVP++NATR+V + Y 
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKAKVYILARMSDILDKKHKGMMTAKEIMDSLQGMFGHQSVQVRHNALKYIFNV 120
           RW KAN+KA+ YILA +S++L KKH+ M+TA+EIMDSLQ MFG  S Q++H+ALKYI+N 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMVEGSSVRDHVLDMMVHFNSVGSNGASIDESSQGCFKLETLPENFLQFQSNVVMNKLIF 180
           RM EG+SVR+HVL+MMVHFN    NGA IDE+SQ  F LE+LPE+FLQF+SN VMNK+ +
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NITTLLNELQTFQFLMKIKGSKVEANVA--SRSYHRGSTSVTKSVASSSSTLKDNKKNMK 240
            +TTLLNELQTF+ LMKIKG K EANVA  +R +HRGSTS TKS+ SSS   K  K   K
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---K 240

Query: 241 KVAKGKRDDKATAQKGKKVKEVVDKGKCFHCNEDEH 275
           K  +G + + A A+  KK K    KG CFHCN++ H
Sbjct: 241 KGGQGNKANLAAAKTTKKAKAA--KGICFHCNQEGH 271

[Close]

BLAST of Tan0018201 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 295.4 bits (755), Expect = 5.0e-76
Identity = 159/276 (57.61%), Postives = 206/276 (74.64%), Query Frame = 0


Query: 1   MNSSVIFLLATEKLTRENLMTWKDNLNIILVAYNLKFVLTEECPQVPSSNATRSVCDAYN 60
           M S+ + +LA +KL   N  +WK+ +N +L+  +L+FVL EECPQVP++NATR+V + Y 
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKAKVYILARMSDILDKKHKGMMTAKEIMDSLQGMFGHQSVQVRHNALKYIFNV 120
           RW KAN+KA+ YILA +S++L KKH+ M+TA+EIMDSLQ MFG  S Q++H+ALKYI+N 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMVEGSSVRDHVLDMMVHFNSVGSNGASIDESSQGCFKLETLPENFLQFQSNVVMNKLIF 180
           RM EG+SVR+HVL+MMVHFN    NGA IDE+SQ  F LE+LPE+FLQF+SN VMNK+ +
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NITTLLNELQTFQFLMKIKGSKVEANVA--SRSYHRGSTSVTKSVASSSSTLKDNKKNMK 240
            +TTLLNELQTF+ LMKIKG K EANVA  +R +HRGSTS TKS+ SSS   K  K   K
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---K 240

Query: 241 KVAKGKRDDKATAQKGKKVKEVVDKGKCFHCNEDEH 275
           K  +G + + A A+  KK K    KG CFHCN++ H
Sbjct: 241 KGGQGNKANLAAAKTTKKTKAA--KGICFHCNQEGH 271

[Close]

BLAST of Tan0018201 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.4e-76
Identity = 159/276 (57.61%), Postives = 206/276 (74.64%), Query Frame = 0


Query: 1   MNSSVIFLLATEKLTRENLMTWKDNLNIILVAYNLKFVLTEECPQVPSSNATRSVCDAYN 60
           M S+ + +LA +KL   N  +WK+ +N +L+  +L+FVL EECPQVP++NATR+V + Y 
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKAKVYILARMSDILDKKHKGMMTAKEIMDSLQGMFGHQSVQVRHNALKYIFNV 120
           RW KAN+KA+ YILA +S++L KKH+ M+TA+EIMDSLQ MFG  S Q++H+ALKYI+N 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMVEGSSVRDHVLDMMVHFNSVGSNGASIDESSQGCFKLETLPENFLQFQSNVVMNKLIF 180
           RM EG+SVR+HVL+MMVHFN    NGA IDE+SQ  F LE+LPE+FLQF+SN VMNK+ +
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NITTLLNELQTFQFLMKIKGSKVEANVA--SRSYHRGSTSVTKSVASSSSTLKDNKKNMK 240
            +TTLLNELQTF+ LMKIKG K EANVA  +R +HRGSTS TKS+ SSS   K  K   K
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---K 240

Query: 241 KVAKGKRDDKATAQKGKKVKEVVDKGKCFHCNEDEH 275
           K  +G + + A A+  KK K    KG CFHCN++ H
Sbjct: 241 KGGQGNKANLAAAKTTKKAKAA--KGICFHCNQEGH 271

[Close]

BLAST of Tan0018201 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.4e-76
Identity = 159/276 (57.61%), Postives = 206/276 (74.64%), Query Frame = 0


Query: 1   MNSSVIFLLATEKLTRENLMTWKDNLNIILVAYNLKFVLTEECPQVPSSNATRSVCDAYN 60
           M S+ + +LA +KL   N  +WK+ +N +L+  +L+FVL EECPQVP++NATR+V + Y 
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKAKVYILARMSDILDKKHKGMMTAKEIMDSLQGMFGHQSVQVRHNALKYIFNV 120
           RW KAN+KA+ YILA +S++L KKH+ M+TA+EIMDSLQ MFG  S Q++H+ALKYI+N 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMVEGSSVRDHVLDMMVHFNSVGSNGASIDESSQGCFKLETLPENFLQFQSNVVMNKLIF 180
           RM EG+SVR+HVL+MMVHFN    NGA IDE+SQ  F LE+LPE+FLQF+SN VMNK+ +
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NITTLLNELQTFQFLMKIKGSKVEANVA--SRSYHRGSTSVTKSVASSSSTLKDNKKNMK 240
            +TTLLNELQTF+ LMKIKG K EANVA  +R +HRGSTS TKS+ SSS   K  K   K
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---K 240

Query: 241 KVAKGKRDDKATAQKGKKVKEVVDKGKCFHCNEDEH 275
           K  +G + + A A+  KK K    KG CFHCN++ H
Sbjct: 241 KGGQGNKANLAAAKTTKKTKAA--KGICFHCNQEGH 271

[Close]

BLAST of Tan0018201 vs. ExPASy TrEMBL
Match: A0A5A7TU93 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002590 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.4e-76
Identity = 159/276 (57.61%), Postives = 206/276 (74.64%), Query Frame = 0


Query: 1   MNSSVIFLLATEKLTRENLMTWKDNLNIILVAYNLKFVLTEECPQVPSSNATRSVCDAYN 60
           M S+ + +LA +KL   N  +WK+ +N +L+  +L+FVL EECPQVP++NATR+V + Y 
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKAKVYILARMSDILDKKHKGMMTAKEIMDSLQGMFGHQSVQVRHNALKYIFNV 120
           RW KAN+KA+ YILA +S++L KKH+ M+TA+EIMDSLQ MFG  S Q++H+ALKYI+N 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMVEGSSVRDHVLDMMVHFNSVGSNGASIDESSQGCFKLETLPENFLQFQSNVVMNKLIF 180
           RM EG+SVR+HVL+MMVHFN    NGA IDE+SQ  F LE+LPE+FLQF+SN VMNK+ +
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NITTLLNELQTFQFLMKIKGSKVEANVA--SRSYHRGSTSVTKSVASSSSTLKDNKKNMK 240
            +TTLLNELQTF+ LMKIKG K EANVA  +R +HRGSTS TKS+ SSS   K  K   K
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---K 240

Query: 241 KVAKGKRDDKATAQKGKKVKEVVDKGKCFHCNEDEH 275
           K  +G + + A A+  KK K    KG CFHCN++ H
Sbjct: 241 KGGQGNKANLAAAKTTKKAKAA--KGICFHCNQEGH 271

[Close]

BLAST of Tan0018201 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.4e-76
Identity = 159/276 (57.61%), Postives = 206/276 (74.64%), Query Frame = 0


Query: 1   MNSSVIFLLATEKLTRENLMTWKDNLNIILVAYNLKFVLTEECPQVPSSNATRSVCDAYN 60
           M S+ + +LA +KL   N  +WK+ +N +L+  +L+FVL EECPQVP++NATR+V + Y 
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKAKVYILARMSDILDKKHKGMMTAKEIMDSLQGMFGHQSVQVRHNALKYIFNV 120
           RW KAN+KA+ YILA +S++L KKH+ M+TA+EIMDSLQ MFG  S Q++H+ALKYI+N 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMVEGSSVRDHVLDMMVHFNSVGSNGASIDESSQGCFKLETLPENFLQFQSNVVMNKLIF 180
           RM EG+SVR+HVL+MMVHFN    NGA IDE+SQ  F LE+LPE+FLQF+SN VMNK+ +
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NITTLLNELQTFQFLMKIKGSKVEANVA--SRSYHRGSTSVTKSVASSSSTLKDNKKNMK 240
            +TTLLNELQTF+ LMKIKG K EANVA  +R +HRGSTS TKS+ SSS   K  K   K
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---K 240

Query: 241 KVAKGKRDDKATAQKGKKVKEVVDKGKCFHCNEDEH 275
           K  +G + + A A+  KK K    KG CFHCN++ H
Sbjct: 241 KGGQGNKANLAAAKTTKKAKAA--KGICFHCNQEGH 271

[Close]

BLAST of Tan0018201 vs. ExPASy TrEMBL
Match: A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.4e-76
Identity = 159/276 (57.61%), Postives = 206/276 (74.64%), Query Frame = 0


Query: 1   MNSSVIFLLATEKLTRENLMTWKDNLNIILVAYNLKFVLTEECPQVPSSNATRSVCDAYN 60
           M S+ + +LA +KL   N  +WK+ +N +L+  +L+FVL EECPQVP++NATR+V + Y 
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKAKVYILARMSDILDKKHKGMMTAKEIMDSLQGMFGHQSVQVRHNALKYIFNV 120
           RW KAN+KA+ YILA +S++L KKH+ M+TA+EIMDSLQ MFG  S Q++H+ALKYI+N 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMVEGSSVRDHVLDMMVHFNSVGSNGASIDESSQGCFKLETLPENFLQFQSNVVMNKLIF 180
           RM EG+SVR+HVL+MMVHFN    NGA IDE+SQ  F LE+LPE+FLQF+SN VMNK+ +
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NITTLLNELQTFQFLMKIKGSKVEANVA--SRSYHRGSTSVTKSVASSSSTLKDNKKNMK 240
            +TTLLNELQTF+ LMKIKG K EANVA  +R +HRGSTS TKS+ SSS   K  K   K
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---K 240

Query: 241 KVAKGKRDDKATAQKGKKVKEVVDKGKCFHCNEDEH 275
           K  +G + + A A+  KK K    KG CFHCN++ H
Sbjct: 241 KGGQGNKANLAAAKTTKKTKAA--KGICFHCNQEGH 271

The following BLAST results are available for this feature:

BLAST of Tan0018201 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0018201 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044955.1	5.0e-76	57.61	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	5.0e-76	57.61	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	5.0e-76	57.61	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0051952.1	5.0e-76	57.61	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	5.0e-76	57.61	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]

BLAST of Tan0018201 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	2.4e-76	57.61	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	2.4e-76	57.61	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7TU93	2.4e-76	57.61	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00259...	[more]
A0A5A7TWB9	2.4e-76	57.61	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]
A0A5D3CSZ6	2.4e-76	57.61	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032...	[more]

BLAST of Tan0018201 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 62..190 e-value: 1.5E-14 score: 54.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..257
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 19..253
None	No IPR available	PANTHER	PTHR35317:SF8	POLYPROTEIN-LIKE PROTEIN	coord: 19..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0018201.1	Tan0018201.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0005488	binding