Tan0018189 (gene) Snake gourd v1

Overview


Name	Tan0018189
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	katanin p60 ATPase-containing subunit A-like 2
Location	LG06: 39290063 .. 39293493 (+)
RNA-Seq Expression	Tan0018189
Synteny	Tan0018189

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTAAACTGTTTAGTAGTGTAAAATACACAAGATTTTTATAAGAAATTATTTCAAATTCGTTAGAGAATTTTGAAAGATGGGAATAACCGACATTATATCATTTATTTTAAAACATTTTTTATATTATATTTTTTTCCTTTTTTACATTTTAAAATGAGAGCTTCTCTTCCTTTAGCCCTAATCTTTTCTCCCTCCTCCCTCACATGCGTTCAGTTGCCGGTAGTTCTCGGATTTCCCACCTTGTTGGTCAGACTTCTTCTCCGGCAAACACACGTTTCGCTTGATGCCTCCCTCGCAGCACGTGTCCCTCCAGCGGATGAGGATGACAATATCGACAACCTAACCAAAGCCATCAGAACCGCTGTGACGCCCATGACGCCGACGGGCTATACGAGACTTTTGAAGGTTTTTTGAAGAAGCATCTGACGAGACCCATGAGTTTCAAGGTTGAACCCCACTTAGCGACCTCAGATCCTCAACACCCACTTCGATGTGAACAAGATCTGAGTGCCTACAACCATGTCATTCTCATATCTAAACACCCACAACCCGTAAGGCTCAAATCTGTAGGTTCTGGTCTCTAATCGAACAATATCCTATGGTCGATCATGGTAATATTGTTTGTTCTTTTTCGTTTTTAAAATATTGTTTGATTATTGGTTATGGCTTTGGGACTTTGGATTTTCGATACTCAGTTATTTCCTCTGTTGTTGAACTATGTTTTGGGTGAATTTAGTTGGAATTGATTGTGTTGTGTTGTGAATCAAGATGCTGGGAGTGTTTATGGTTCAATGCCTTTGGTGAGTTCTTTTTTTGTTCGATTCTAAGAGACTTTCTCTGATTTGTTTTTTCATTTTGAGGGTGAGTTTCTATTAATAAATGTTGATTAATGTCATTGTTCTTCAGGGACCACAAGCAGAACCATAACTTGGGTGTTTTTTATTTTTAAAAATAATTTTACTTAAATTATCACGAGTCAACTCTGTAGCTACATTTCTTGTGACATTGTTAAGCATGTATTGGCATTCTGTTTCATTTTATATTATCCTCCCTATGCATATCAAGATTTTGATCCTCTTATTGACGAAATCATGTTGTTGACCTGTTAAAAAAGCCATGTTAAGTTTTTTTAATCTAATTATGGCCTAGCCAAATATTGATTGCTGGATTAGATTGCAGATGGATGGGTTGATGCAGACAGATGAACTAGTCTTCGTTTTGGCGGCGACGAATCTCCCCTTAGAACTGGATGCTGCCATGCTCCGTCGTTTTGAAAAGAGAGTATCCTCTCATTAGTATGACTTTTGTTTTGATAGTATAATTAGAACGGTGGTAAATAGCTCATAATCTCTTAAATGATGATTGAACTGATTCACAACTGCTTCTTGAGTCACAATGGCAAAGAATTGTCCTGTCTTCTCATGGCCAGCTATATCATATTCCTCAAGGTTTAAGTCGTTTTATGGTTACTCATTCATTGGAAAAGCTTTTTGCACCCCAAAATTTTTCTTTTCGACCTTGATATGAGGATTTTTTTCCCTGAAAGAAACATTCTTTCCAAACTCAAAAACCACACATATGTTCATAGTGAATCGAACCATAAATCATATTGCCCCATTTGATGCATGCTTCAACATTCTATAACTTTGTAAAAAGGAGATTGAATTGAGAAAAAAGTATCAGTAACTTAAATAAAAAGATTTTGATTTAGAAACTGCTATAATATTTTAATTTACAATAACTTTTAGATTTTTTCTTTTTTTGGCTTGAAACTTTAATCTGGATGATAGTTTAGATGAGTATCAATCACATTTGAGTGATAAGTGATTTTCCTTTGACCATGGTAAAAAGATACTTGTGCCTCTGCTAGATCCTGAAGCTAGAAGAGTTATGTTTGAAGAACTCCTTCCTCCTCAACCTGGAGATGAAGAACTTCCTTATGATATATTGATGGAAAGAACAAAAGGCTATTCAGGTTCTGATATTAGATTAGTGTGTAAAAAGGCTGCTATGCCACTTAATGGCTGAACTTGAGAGGCAACAAAAAGAGTTACCCGAAGAACAACATGGAGTAGTACTGCCTGAAGAAGGTATGGAAACTTTTTAAATGCATCTTTTCGCTTTTTTTTTTTTTTTTGTTCGTTTCAAAGTGAAATTCTCCTTGAATCTATGGGAAGCCATCCAAGTCTATGCGCATGCAATCTCTATTTTTCGATTTGTCAGTGTCCACAGGGAGGATGAGATCTGTAATCTAGAAATTAAAAAACCAATGAAATACATTTAGGAACCGTTGTCTTGAACATATGGGTGATCAGTCTCTCTTCTCTGTACCATCTTACAAAAAGTTTTGACCTAATAACTCTTCATGACTGCAGAGTTGCCCAAGGTTGGACCAATCACAGTCTCTGACATCGAGGTTGCCTTGTGAAACACCCGACCATCTGCTCTTTTGGATGTTCCTCTCTATGAAAAATTCAATGCTGACTACGGTAGTCAATTGCGTCATTGAAGGCACACAAGTGCTTCACTTTTCCTTCTTACCCTTCATGTATGCGTATGCTGGTGTGGTTTGTTATACTCCAAGAAAAAAAATATTAAATTGTGTTCACTAGACAATTTATAACTTACTATTACCACAGAAGATTAAATGAGCCAACAATATTTGGCTCGGAAATGCATTGCTCATTTGAATGTCTCTCACTATCAGTTGGACTGTTATTAGATTAGAGATATGATAGCAATTTTTCCCAGATAATTAAGTCTAGCAATTGGTGCTTACTATTGGATTAGTAGATGTGGGGCATATCATGAACTTTTTTTTTTTTATATTGATGAAAGTGTTGTTGATATCTGATACTGATAGATGTCTTCTTCTTGTGTTTTAGTTTTCTGTCAAATGATCTATATGCAGAGGTGATGTGACAAGTAACTATTGTGGATAGATATGAGATTTTACAGACACCTAAAAGGCTTGCATGAGCAAGTAGCATTATCATGTACCTGTGTTACCAATGCCAATTACATAGAAAGATGAAAATTGTGAAGTTTCTTACCTACAAAGAAGTTATCTATTTATATCATCTTCATGTTGTTGCCTTCTTGTTGTGACTTTGTAACTAAACTTCCTTAAAAGGGAAATTGGGATGTGTTCTTGACTTCCAAGTATGAGTGTGTTCTGACTCTGCTTTTGGACATTGAGCTCCAATTTGGTAACTAGAAGATTCTCCAACTTCATGTCCTGTAACCCTTCAGGGACCACAAACAGATGGCGAGTGACATGGTTGTTAGGGAAATGTAATTTGTATATATTCTTTTATGATATGTAATACACTTCTTTTAATACATACTTTATATTTTATTAATTAAAGTAAAGTTTGTAAGATTACTTGGGTAAAAATGTATTAGTATTGAGATTTTTTTTGTACAAAA

mRNA sequence

GTTTAAACTGTTTAGTAGTGTAAAATACACAAGATTTTTATAAGAAATTATTTCAAATTCGTTAGAGAATTTTGAAAGATGGGAATAACCGACATTATATCATTTATTTTAAAACATTTTTTATATTATATTTTTTTCCTTTTTTACATTTTAAAATGAGAGCTTCTCTTCCTTTAGCCCTAATCTTTTCTCCCTCCTCCCTCACATGCGTTCAGTTGCCGGTAGTTCTCGGATTTCCCACCTTGTTGGTCAGACTTCTTCTCCGGCAAACACACGTTTCGCTTGATGCCTCCCTCGCAGCACGTGTCCCTCCAGCGGATGAGGATGACAATATCGACAACCTAACCAAAGCCATCAGAACCGCTGTGACGCCCATGACGCCGACGGGCTATACGAGACTTTTGAAGGTTTTTTGAAGAAGCATCTGACGAGACCCATGAGTTTCAAGGTTGAACCCCACTTAGCGACCTCAGATCCTCAACACCCACTTCGATGTGAACAAGATCTGAGTGCCTACAACCATGTCATTCTCATATCTAAACACCCACAACCCGTAAGGCTCAAATCTGTAGGTTCTGGTCTCTAATCGAACAATATCCTATGGTCGATCATGATTGCAGATGGATGGGTTGATGCAGACAGATGAACTAGTCTTCGTTTTGGCGGCGACGAATCTCCCCTTAGAACTGGATGCTGCCATGCTCCGTCGTTTTGAAAAGAGAATACTTGTGCCTCTGCTAGATCCTGAAGCTAGAAGAGTTATGTTTGAAGAACTCCTTCCTCCTCAACCTGGAGATGAAGAACTTCCTTATGATATATTGATGGAAAGAACAAAAGGCTATTCAGGTTCTGATATTAGATTAGTGTGTAAAAAGGCTGCTATGCCACTTAATGGCTGAACTTGAGAGGCAACAAAAAGAGTTACCCGAAGAACAACATGGAGTAGTACTGCCTGAAGAAGAGTTGCCCAAGGTTGGACCAATCACAGTCTCTGACATCGAGGTTGCCTTGTGAAACACCCGACCATCTGCTCTTTTGGATGTTCCTCTCTATGAAAAATTCAATGCTGACTACGGTAGTCAATTGCGTCATTGAAGGCACACAAGTGCTTCACTTTTCCTTCTTACCCTTCATGTATGCGTATGCTGGTGTGGTTTGTTATACTCCAAGAAAAAAAATATTAAATTGTGTTCACTAGACAATTTATAACTTACTATTACCACAGAAGATTAAATGAGCCAACAATATTTGGCTCGGAAATGCATTGCTCATTTGAATGTCTCTCACTATCAGTTGGACTGTTATTAGATTAGAGATATGATAGCAATTTTTCCCAGATAATTAAGTCTAGCAATTGGTGCTTACTATTGGATTAGTAGATGTGGGGCATATCATGAACTTTTTTTTTTTTATATTGATGAAAGTGTTGTTGATATCTGATACTGATAGATGTCTTCTTCTTGTGTTTTAGTTTTCTGTCAAATGATCTATATGCAGAGGTGATGTGACAAGTAACTATTGTGGATAGATATGAGATTTTACAGACACCTAAAAGGCTTGCATGAGCAAGTAGCATTATCATGTACCTGTGTTACCAATGCCAATTACATAGAAAGATGAAAATTGTGAAGTTTCTTACCTACAAAGAAGTTATCTATTTATATCATCTTCATGTTGTTGCCTTCTTGTTGTGACTTTGTAACTAAACTTCCTTAAAAGGGAAATTGGGATGTGTTCTTGACTTCCAAGTATGAGTGTGTTCTGACTCTGCTTTTGGACATTGAGCTCCAATTTGGTAACTAGAAGATTCTCCAACTTCATGTCCTGTAACCCTTCAGGGACCACAAACAGATGGCGAGTGACATGGTTGTTAGGGAAATGTAATTTGTATATATTCTTTTATGATATGTAATACACTTCTTTTAATACATACTTTATATTTTATTAATTAAAGTAAAGTTTGTAAGATTACTTGGGTAAAAATGTATTAGTATTGAGATTTTTTTTGTACAAAA

Coding sequence (CDS)

ATGGATGGGTTGATGCAGACAGATGAACTAGTCTTCGTTTTGGCGGCGACGAATCTCCCCTTAGAACTGGATGCTGCCATGCTCCGTCGTTTTGAAAAGAGAATACTTGTGCCTCTGCTAGATCCTGAAGCTAGAAGAGTTATGTTTGAAGAACTCCTTCCTCCTCAACCTGGAGATGAAGAACTTCCTTATGATATATTGATGGAAAGAACAAAAGGCTATTCAGGTTCTGATATTAGATTAGTGTGTAAAAAGGCTGCTATGCCACTTAATGGCTGA

Protein sequence

MDGLMQTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDEELPYDILMERTKGYSGSDIRLVCKKAAMPLNG

Homology

[Close]

BLAST of Tan0018189 vs. ExPASy Swiss-Prot
Match: A0JMA9 (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus tropicalis OX=8364 GN=katnal2 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.0e-20
Identity = 56/94 (59.57%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 1   MDGLMQTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDE 60
           MDGL ++D+LVFVLAA+NLP ELD AMLRR EKRILV L   EAR+ M +  LPP     
Sbjct: 388 MDGLARSDDLVFVLAASNLPWELDYAMLRRLEKRILVDLPSKEARQAMIQHWLPPVSNSS 447

Query: 61  ------ELPYDILMERTKGYSGSDIRLVCKKAAM 89
                 +L Y  L   T GYSGSDIRLVCK+AAM
Sbjct: 448 GVELRTDLDYSTLGAETDGYSGSDIRLVCKEAAM 481

[Close]

BLAST of Tan0018189 vs. ExPASy Swiss-Prot
Match: Q8IYT4 (Katanin p60 ATPase-containing subunit A-like 2 OS=Homo sapiens OX=9606 GN=KATNAL2 PE=1 SV=3)

HSP 1 Score: 98.6 bits (244), Expect = 3.9e-20
Identity = 54/94 (57.45%), Postives = 66/94 (70.21%), Query Frame = 0


Query: 1   MDGLMQTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDE 60
           MDGL ++++LVFVLAA+NLP ELD AMLRR EKRILV L   EAR+ M    LPP     
Sbjct: 384 MDGLARSEDLVFVLAASNLPWELDCAMLRRLEKRILVDLPSREARQAMIYHWLPPVSKSR 443

Query: 61  ------ELPYDILMERTKGYSGSDIRLVCKKAAM 89
                 EL Y +L + T+GYSGSDI+LVC++AAM
Sbjct: 444 ALELHTELEYSVLSQETEGYSGSDIKLVCREAAM 477

[Close]

BLAST of Tan0018189 vs. ExPASy Swiss-Prot
Match: Q9D3R6 (Katanin p60 ATPase-containing subunit A-like 2 OS=Mus musculus OX=10090 GN=Katnal2 PE=2 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 5.1e-20
Identity = 53/94 (56.38%), Postives = 67/94 (71.28%), Query Frame = 0


Query: 1   MDGLMQTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDE 60
           MDGL ++++LVFVLAA+NLP ELD AMLRR EKRILV L   EAR+ M    LPP   + 
Sbjct: 385 MDGLARSEDLVFVLAASNLPWELDCAMLRRLEKRILVDLPSQEARQAMIYHWLPPVSKNH 444

Query: 61  ------ELPYDILMERTKGYSGSDIRLVCKKAAM 89
                 +L Y +L + T+GYSGSDI+LVC++AAM
Sbjct: 445 ALELHTQLEYSVLSQETEGYSGSDIKLVCREAAM 478

[Close]

BLAST of Tan0018189 vs. ExPASy Swiss-Prot
Match: P34808 (Meiotic spindle formation protein mei-1 OS=Caenorhabditis elegans OX=6239 GN=mei-1 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.8e-15
Identity = 40/78 (51.28%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 11  VFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDEELPYDILMER 70
           VFVLAATN+P ELD A+ RRFEKRI +PL D +AR+ + E+ +   P  +E+ YD L  R
Sbjct: 333 VFVLAATNIPWELDEALRRRFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAAR 392

Query: 71  TKGYSGSDIRLVCKKAAM 89
           T+G+SG+D+  +C+ AA+
Sbjct: 393 TEGFSGADVVSLCRTAAI 410

[Close]

BLAST of Tan0018189 vs. ExPASy Swiss-Prot
Match: Q3B8D5 (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus laevis OX=8355 GN=katnal2 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-12
Identity = 49/88 (55.68%), Postives = 55/88 (62.50%), Query Frame = 0


Query: 8   DELVFVLAATNL-PLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPP---QPGDE--- 67
           DEL  V++     P ELD AMLRR EKRILV L   EAR+ M +  LPP     G E   
Sbjct: 357 DELESVMSQRGTGPGELDYAMLRRLEKRILVDLPSKEARQAMIQHWLPPISNSSGVELRM 416

Query: 68  ELPYDILMERTKGYSGSDIRLVCKKAAM 89
           +L Y  L E T GYSGSDIRLVCK+AAM
Sbjct: 417 DLDYSTLGEETDGYSGSDIRLVCKEAAM 444

[Close]

BLAST of Tan0018189 vs. NCBI nr
Match: XP_022146517.1 (katanin p60 ATPase-containing subunit A-like 2 isoform X1 [Momordica charantia] >XP_022146518.1 katanin p60 ATPase-containing subunit A-like 2 isoform X1 [Momordica charantia])

HSP 1 Score: 160.2 bits (404), Expect = 8.4e-36
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MDGLMQTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDE 60
           MDGLMQTDELVFVLAATNLP ELDAAMLRR EKRILVPL +PEARR MFEELLPPQPGDE
Sbjct: 254 MDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPPQPGDE 313

Query: 61  ELPYDILMERTKGYSGSDIRLVCKKAAM 89
           ELPYD+LMERT+GYSGSDIRLVCK+AAM
Sbjct: 314 ELPYDLLMERTQGYSGSDIRLVCKEAAM 341

[Close]

BLAST of Tan0018189 vs. NCBI nr
Match: XP_022146519.1 (katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Momordica charantia])

HSP 1 Score: 160.2 bits (404), Expect = 8.4e-36
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MDGLMQTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDE 60
           MDGLMQTDELVFVLAATNLP ELDAAMLRR EKRILVPL +PEARR MFEELLPPQPGDE
Sbjct: 244 MDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPPQPGDE 303

Query: 61  ELPYDILMERTKGYSGSDIRLVCKKAAM 89
           ELPYD+LMERT+GYSGSDIRLVCK+AAM
Sbjct: 304 ELPYDLLMERTQGYSGSDIRLVCKEAAM 331

[Close]

BLAST of Tan0018189 vs. NCBI nr
Match: TYK13285.1 (katanin p60 ATPase-containing subunit A-like 2 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MDGLMQTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDE 60
           MDGLMQTDELVFVLAATNLP ELDAAMLRR EKRILVPL +PEARR MFEELLPPQPGDE
Sbjct: 238 MDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPPQPGDE 297

Query: 61  ELPYDILMERTKGYSGSDIRLVCKKAAM 89
           +LPYDILMERT+GYSGSDIRLVCK+AAM
Sbjct: 298 DLPYDILMERTEGYSGSDIRLVCKEAAM 325

[Close]

BLAST of Tan0018189 vs. NCBI nr
Match: XP_008439630.1 (PREDICTED: katanin p60 ATPase-containing subunit A-like 2 isoform X1 [Cucumis melo])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MDGLMQTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDE 60
           MDGLMQTDELVFVLAATNLP ELDAAMLRR EKRILVPL +PEARR MFEELLPPQPGDE
Sbjct: 265 MDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPPQPGDE 324

Query: 61  ELPYDILMERTKGYSGSDIRLVCKKAAM 89
           +LPYDILMERT+GYSGSDIRLVCK+AAM
Sbjct: 325 DLPYDILMERTEGYSGSDIRLVCKEAAM 352

[Close]

BLAST of Tan0018189 vs. NCBI nr
Match: XP_008439631.1 (PREDICTED: katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Cucumis melo])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MDGLMQTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDE 60
           MDGLMQTDELVFVLAATNLP ELDAAMLRR EKRILVPL +PEARR MFEELLPPQPGDE
Sbjct: 252 MDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPPQPGDE 311

Query: 61  ELPYDILMERTKGYSGSDIRLVCKKAAM 89
           +LPYDILMERT+GYSGSDIRLVCK+AAM
Sbjct: 312 DLPYDILMERTEGYSGSDIRLVCKEAAM 339

[Close]

BLAST of Tan0018189 vs. ExPASy TrEMBL
Match: A0A6J1CZS9 (katanin p60 ATPase-containing subunit A-like 2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015721 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.0e-36
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MDGLMQTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDE 60
           MDGLMQTDELVFVLAATNLP ELDAAMLRR EKRILVPL +PEARR MFEELLPPQPGDE
Sbjct: 254 MDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPPQPGDE 313

Query: 61  ELPYDILMERTKGYSGSDIRLVCKKAAM 89
           ELPYD+LMERT+GYSGSDIRLVCK+AAM
Sbjct: 314 ELPYDLLMERTQGYSGSDIRLVCKEAAM 341

[Close]

BLAST of Tan0018189 vs. ExPASy TrEMBL
Match: A0A6J1CYC4 (katanin p60 ATPase-containing subunit A-like 2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015721 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.0e-36
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MDGLMQTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDE 60
           MDGLMQTDELVFVLAATNLP ELDAAMLRR EKRILVPL +PEARR MFEELLPPQPGDE
Sbjct: 244 MDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPPQPGDE 303

Query: 61  ELPYDILMERTKGYSGSDIRLVCKKAAM 89
           ELPYD+LMERT+GYSGSDIRLVCK+AAM
Sbjct: 304 ELPYDLLMERTQGYSGSDIRLVCKEAAM 331

[Close]

BLAST of Tan0018189 vs. ExPASy TrEMBL
Match: A0A5D3CNW2 (Katanin p60 ATPase-containing subunit A-like 2 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009040 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.3e-36
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MDGLMQTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDE 60
           MDGLMQTDELVFVLAATNLP ELDAAMLRR EKRILVPL +PEARR MFEELLPPQPGDE
Sbjct: 238 MDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPPQPGDE 297

Query: 61  ELPYDILMERTKGYSGSDIRLVCKKAAM 89
           +LPYDILMERT+GYSGSDIRLVCK+AAM
Sbjct: 298 DLPYDILMERTEGYSGSDIRLVCKEAAM 325

[Close]

BLAST of Tan0018189 vs. ExPASy TrEMBL
Match: A0A5A7UBK8 (Katanin p60 ATPase-containing subunit A-like 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G001430 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.3e-36
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MDGLMQTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDE 60
           MDGLMQTDELVFVLAATNLP ELDAAMLRR EKRILVPL +PEARR MFEELLPPQPGDE
Sbjct: 265 MDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPPQPGDE 324

Query: 61  ELPYDILMERTKGYSGSDIRLVCKKAAM 89
           +LPYDILMERT+GYSGSDIRLVCK+AAM
Sbjct: 325 DLPYDILMERTEGYSGSDIRLVCKEAAM 352

[Close]

BLAST of Tan0018189 vs. ExPASy TrEMBL
Match: A0A0A0KKN3 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G523400 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.3e-36
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MDGLMQTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDE 60
           MDGLMQTDELVFVLAATNLP ELDAAMLRR EKRILVPL +PEARR MFEELLPPQPGDE
Sbjct: 252 MDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPPQPGDE 311

Query: 61  ELPYDILMERTKGYSGSDIRLVCKKAAM 89
           +LPYDILMERT+GYSGSDIRLVCK+AAM
Sbjct: 312 DLPYDILMERTEGYSGSDIRLVCKEAAM 339

[Close]

BLAST of Tan0018189 vs. TAIR 10
Match: AT2G34560.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 2.4e-33
Identity = 68/88 (77.27%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 1   MDGLMQTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDE 60
           MDGL +T+ELVFVLAATNLP ELDAAMLRR EKRILVPL DPEARR MFE L+P QPGDE
Sbjct: 233 MDGLQKTNELVFVLAATNLPWELDAAMLRRLEKRILVPLPDPEARRGMFEMLIPSQPGDE 292

Query: 61  ELPYDILMERTKGYSGSDIRLVCKKAAM 89
            LP+D+L+E+++GYSGSDIR++CK+AAM
Sbjct: 293 PLPHDVLVEKSEGYSGSDIRILCKEAAM 320

[Close]

BLAST of Tan0018189 vs. TAIR 10
Match: AT2G34560.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 2.4e-33
Identity = 68/88 (77.27%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 1   MDGLMQTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDE 60
           MDGL +T+ELVFVLAATNLP ELDAAMLRR EKRILVPL DPEARR MFE L+P QPGDE
Sbjct: 242 MDGLQKTNELVFVLAATNLPWELDAAMLRRLEKRILVPLPDPEARRGMFEMLIPSQPGDE 301

Query: 61  ELPYDILMERTKGYSGSDIRLVCKKAAM 89
            LP+D+L+E+++GYSGSDIR++CK+AAM
Sbjct: 302 PLPHDVLVEKSEGYSGSDIRILCKEAAM 329

[Close]

BLAST of Tan0018189 vs. TAIR 10
Match: AT2G45500.1 (AAA-type ATPase family protein )

HSP 1 Score: 72.4 bits (176), Expect = 2.1e-13
Identity = 38/82 (46.34%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 8   DELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGD-EELPYDI 67
           D+LV ++ ATN P ELD A+LRR  KRI VPL D   R+++F+  L  QP    +   D 
Sbjct: 355 DDLVIIIGATNKPQELDDAVLRRLVKRIYVPLPDSNVRKLLFKTKLKCQPHSLSDGDIDK 414

Query: 68  LMERTKGYSGSDIRLVCKKAAM 89
           +++ T+GYSGSD++ +C++AAM
Sbjct: 415 IVKETEGYSGSDLQALCEEAAM 436

[Close]

BLAST of Tan0018189 vs. TAIR 10
Match: AT2G45500.2 (AAA-type ATPase family protein )

HSP 1 Score: 72.4 bits (176), Expect = 2.1e-13
Identity = 38/82 (46.34%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 8   DELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGD-EELPYDI 67
           D+LV ++ ATN P ELD A+LRR  KRI VPL D   R+++F+  L  QP    +   D 
Sbjct: 351 DDLVIIIGATNKPQELDDAVLRRLVKRIYVPLPDSNVRKLLFKTKLKCQPHSLSDGDIDK 410

Query: 68  LMERTKGYSGSDIRLVCKKAAM 89
           +++ T+GYSGSD++ +C++AAM
Sbjct: 411 IVKETEGYSGSDLQALCEEAAM 432

[Close]

BLAST of Tan0018189 vs. TAIR 10
Match: AT1G64110.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 4.8e-13
Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 2   DGLM-QTDELVFVLAATNLPLELDAAMLRRFEKRILVPLLDPEARRVMFEELLPPQPGDE 61
           DGLM +  E + VLAATN P +LD A++RRFE+RI+V L   E R  +   LL  +  DE
Sbjct: 651 DGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPAVENREKILRTLLAKEKVDE 710

Query: 62  ELPYDILMERTKGYSGSDIRLVCKKAA 88
            L Y  L   T+GY+GSD++ +C  AA
Sbjct: 711 NLDYKELAMMTEGYTGSDLKNLCTTAA 737

The following BLAST results are available for this feature:

BLAST of Tan0018189 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0JMA9	3.0e-20	59.57	Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus tropicalis OX=8364 GN=...	[more]
Q8IYT4	3.9e-20	57.45	Katanin p60 ATPase-containing subunit A-like 2 OS=Homo sapiens OX=9606 GN=KATNAL...	[more]
Q9D3R6	5.1e-20	56.38	Katanin p60 ATPase-containing subunit A-like 2 OS=Mus musculus OX=10090 GN=Katna...	[more]
P34808	3.8e-15	51.28	Meiotic spindle formation protein mei-1 OS=Caenorhabditis elegans OX=6239 GN=mei...	[more]
Q3B8D5	1.0e-12	55.68	Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus laevis OX=8355 GN=katn...	[more]

BLAST of Tan0018189 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146517.1	8.4e-36	90.91	katanin p60 ATPase-containing subunit A-like 2 isoform X1 [Momordica charantia] ...	[more]
XP_022146519.1	8.4e-36	90.91	katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Momordica charantia]	[more]
TYK13285.1	1.1e-35	90.91	katanin p60 ATPase-containing subunit A-like 2 isoform X3 [Cucumis melo var. mak...	[more]
XP_008439630.1	1.1e-35	90.91	PREDICTED: katanin p60 ATPase-containing subunit A-like 2 isoform X1 [Cucumis me...	[more]
XP_008439631.1	1.1e-35	90.91	PREDICTED: katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Cucumis me...	[more]

BLAST of Tan0018189 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZS9	4.0e-36	90.91	katanin p60 ATPase-containing subunit A-like 2 isoform X1 OS=Momordica charantia...	[more]
A0A6J1CYC4	4.0e-36	90.91	katanin p60 ATPase-containing subunit A-like 2 isoform X2 OS=Momordica charantia...	[more]
A0A5D3CNW2	5.3e-36	90.91	Katanin p60 ATPase-containing subunit A-like 2 isoform X3 OS=Cucumis melo var. m...	[more]
A0A5A7UBK8	5.3e-36	90.91	Katanin p60 ATPase-containing subunit A-like 2 isoform X1 OS=Cucumis melo var. m...	[more]
A0A0A0KKN3	5.3e-36	90.91	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G523400 PE=4 SV...	[more]

BLAST of Tan0018189 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34560.1	2.4e-33	77.27	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G34560.2	2.4e-33	77.27	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G45500.1	2.1e-13	46.34	AAA-type ATPase family protein	[more]
AT2G45500.2	2.1e-13	46.34	AAA-type ATPase family protein	[more]
AT1G64110.2	4.8e-13	47.13	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.8.60		coord: 41..89 e-value: 1.7E-24 score: 88.7
None	No IPR available	PANTHER	PTHR23074	AAA DOMAIN-CONTAINING	coord: 2..89
None	No IPR available	PANTHER	PTHR23074:SF143	KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2 ISOFORM X1	coord: 2..89
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..40 e-value: 1.7E-24 score: 88.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 12..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0018189.1	Tan0018189.1	mRNA
Tan0018189.2	Tan0018189.2	mRNA
Tan0018189.3	Tan0018189.3	mRNA
Tan0018189.4	Tan0018189.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity