Tan0018163 (gene) Snake gourd v1

Overview


Name	Tan0018163
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Histone H3.2
Location	LG06: 32589314 .. 32602633 (-)
RNA-Seq Expression	Tan0018163
Synteny	Tan0018163

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCACTTTTGCCCAAAATTGAAACAGCACAGAGCTCCCTCCAATTCTTTTCTGCCTGCTCGTCACTCTCACGCTACTGCTTCTAATTTCAAATCAATGGCGCGGGCAAGGCATCCAGCCCAAAGGAACTCAAATCGCAAGCCATCAGGTTCTCTCTCCTACACACACAGTAATTTGGATTAATTTTACGTTTTCCTTTGGATTGATAATGATTTCGTCCATGGAAATGTTTTTGGATGTATTGACCTTTTGATTTTGTTTTTGCCTTTTCTTTTCCCTTCTTTTTTACAGCTTCTTGTTTTGTTTGTAAAATTTTAGGTACTGGAGCTTCACCGTCTTCCGCAGCTGCGCCGTCGACGGTATCTCTTTCTCGTTTTTTTGTGACAATTTTTATCACTTCCATGAATGTTTGCGACATTTCTATTTTCTTTGGTTATGCATGATGGAGAAGGTGTTAGGGAGATTTCAGGTTATGGGTATGTGAAGTCTGGTTCCAGGTGATACGACGGCTAAATAATTTTGGAAAATGAGAATGTTGCCATTTTTTTCATTTTCGACATACAATTTCTTGTCCAAAGAAAGGGGAAAAAGACCTGAATCTTTCTTTTCATCTTGCTAAGAAAACAGTAGAAATGAGGGAATAACTTATCAAATCTTTGTCCTATCGATTTTTGCCTCTGTGTTCTGCGCGTTAAAGGTGAGATTCTTTCATTTTTGGCTCGAAAGGAATTATAGACCTTTTAGAGGAGCGGAGAAATCTTAGGGGGAATTGTAGGAGATTATTAGGCTTAATGCCTCATTGTAGGCTTTGGTAGCTAAGGTCTTTTGTAATTATGAGCTAGATTTCATTCTTTTGGATTCAGTCATTCCTTGTAGGTGTCTCGACTCTTTTTGTTGGATGTTTTCTAGTATGCCTCCGTACATTTTCATTATTCTCAATGAAAGATCAATTTTTCCATTAAAAAATGTGGCAAAGGTGAGATTAAATGGCAATGCTAAGTTACCTTATTGCATTCAAGTTTACGTTCTTAAATGCGTTATTATTACCTAGCAAGTGTACTTTGATGAAATTTCAACCCTAGATGTGTAGCAAATGATTTGACTTTACATCAATGTGGTGCTTGCCTTTGTAGAAGTTACTCCACCGTTCCTCATTCATGGATGGTGAAAGGTTTTAGGGTTTAGATGAGTAATAGACAAAAGGAAGAGAGATAGAGCTTGGGCGTCCTATGACTATAATACATATCTTTCTGCAATGAAGTTCTCAGTTGTAGAAGTACGTTGTCTGGTTAAGTTGTTGGATATTGCAGCAGGCGACCCAAGCTGGTGAAAATGTTTTGATAGACAAATTATCCCTTCAATCTGCTTTACTTATCAAAGGAAGGGTAAACGTAAGTTAGAAGGGTTACTGGGATAAACGGATAGGTAGGGGTAGCTACTAATGGTAAATAGTATATAAGGCTGAGTGGTTGGAAAGGAGAGACAGTTATCTTCTTATGTGTTTCAAGGAGAAGCAGACCCCTCGAAAGTCTGAACTTTGTACGTAAATAAAGAAGAATTACAGCAGATTGCCTAGCCAGTTTCTAATTGTGAGGATGTAACTTTTGCAACCCATGATCTGGGGGACTTGGTTCCATATAGCGATTTGGATTTTGATTTGAAGACCTCTTATGTCTACAACTATCAATTGGACTAGAGGGATTCTGTAATTGGAAAGGAAGTTGTTAAGGCCTCCTATTACTAAAACATATATTAGGAAGGGTAAAAAGGAGAAAAGAGAGAGTGGGGAGTAACGGTTCATTGGGGAACACTGCTGGGATTGTGGGCTGCTGTACGGTCCTTGTGGGAGTGAGGGTATATGTTACCTGGAGAATGTCGGGTAGAGGTAGGCAGAAATTGGGTAGTGAGTATTGGCAGGAGAGGTTCTCAGCTCTCTCTAACAGTTGAGTGTTTGGTTCATCTTTTCTTGTAATAGAGACTCTTGAATGAAGATAATGATACACTATCTATTGACGAACTCTCAATAGAATAGTGTTATTTCTATTAATCCCGTGTTTTTGTGTTGTTTTTGTGTGTTTTCCCGTGTGAAAGGTAGGTTGAAGAGAGGAATACCTAACAACTTGGTATCAGAGCACGTCATCCTGGGTAAGACAAGGAGAATGGCGAAGCTGGAAGTAGAGGAAAGGGTATCGGTCTGCGAGAAAGATATCGGTGAGGTGAAGGTTTTTGTCCAGAACATGGAAAAGACACTCTAGAAATTGACTTACTTGATTACAGAACTAAAAGTGTCCAAGGGGAAGTCAGTACTCACGGAGGTGTCCGACCAGAAGCATTAGGAGGATGAGCATCGTGGGGATGTTTCTGAAGACAAGGAAATGGAGGAAGGAGAGTCCTCTTTCGGAAGAAGGGAAACTGGGGTGAAAGAGGTAAGATGAAACGTCTGGCAATGTGAGTTTTCATCGGTGAGAAGCCGGATTCTTGGGTCTTCAGGGCAGAGCATTACTTCGAGATCTATCAACTGTCTGATAAAGAGAAAATCATGGTGTCGATTATTAGTTTCGAGCCGGATGTCGTGGAATAGTTCAGGTGGGCTGACAACCGGAAGAAGATAAGAAGTTGGAGTGATTTGAAGGCACGTCTGTTTGAGTGCTTTCGGCCTTCGCAGGAAGGTAGCTTGTGTGCCCGTTTCCTCGCCGTGAAGCAAGAGGGTACAGTGGTGGAATACCAGAAGCTGTTTGAAATTTACTCATCGTCGTTGCCTGATTTGCCAGAGGACGTCCTTGAGAATACGTTTCTGAATGGGCTCAAGCCAACCATCAGGGCTTCGGTGAAGAGCAGGCAACTTATGGGGCTGGATGACATAATGAAACAAGCCCAGTTAATTGAGGATAGGGAGGGAGGCCCTCCGTTTGGCAATCGAGGAAGAAAGGGGTGGGCTGGGCTCGAGTCTACATGGGTCGCGAGCAGCTGGCGGTAGTAAGGTGGGCTCAAGCTCCAATTTGAAATTAAGCCCGAAGGCGGGCGACTCTTCTGGCATTCGTACGACAACCCTACCCGATAAGGGGACACTGGGAAAAAGAGAACCCCCACCGAAACGGCTATCAGACGCCGATTTTCAAGCTAAGCGAGCTCAAGGCTTATGTTTTCGTTGTGACGAAAAGTACTCGAAAGACCATGTTTGTAAGAATCGGGAAGTCAGGGAGCTACGAGTGTTGTTGGTGAATGGAGTTGATGAGATTGAGCTCATTCAGAGAGACTGGGATCCATAGGGGACAGAGACACCGACAAACGACATGGGAGATCTAGTTGAGCTAGATTTAAAATCAGTGATTGGTTGCTCAACATCGGGGACAATGAAGGTGAAAGGATTGATATGTGAGCGTGAAGCTAAGAAGCACATATACGGATACGAGACACGGATACGATACGACACGGACACGGCGACACGTCATTTCTTTAAAATCTAGGACACGGACACGACTAGGACACGTTTATTAAATATACATTTTTTAAATATATATTATTTTTATATAGAAAGAAATTTAAAGTTAATAAGTTTATGTATCTATATGCTTAAAAAAATGATTTTGATGTATTTCGTTCTCAAACTTCATTATTTTTGTCCTATATTACATGTAGTTTAGTATACTTGAAAAGTGTTCATTATGTGCCTAACAAATAATGGACCTATATTGACTTTGTACAACTAGTTTCTAACACATCTATAATGCTAACAAGTGTCGGAGTGTCTAAGTGTCTGACACGTGTCCGACACGGACACACTAGCCAAATTAAAGTGTTCGTGCTTCTTAGGCGTGAAGTGGTTGTGTTGATCGATTCTGGGGCTACCCACAATTTCATTTCACAGAAATTGGTGGAGGAAATGGAGTTACCGTTGGTAGATACATCAGGTATTGTGATGGGAAACGACATAGCAACAAAAGGAAAAGGAGTCTGCAAGTCGCTAGTTGTATCCTTGCTTGAGTTGATCATTTGTGAAGATTTCTTACCGTTAGAGATGGGAAACGTGGAAGTCATATTAGGGATGCAATGGCTTCGAACGATGGGAGAAATGAACGTTGACTGGTCTTCCTTGAGGACGACGTTCGACTCAGGGGGGTTAGCAAGTCACCATAAAAGGGGACCCCTCGTTGACTCGGGCAGAAGTCTCATTAAAAATGCTAGCCAAGACTTGGGCAGAGGACGATCAAGGTTACTTAGTAGAACTGAGAGGGATGAATTTAGAAGAGCAAACAGAGAATGAATCAGAAGGGAGTATAAACGAACCTACGCCAGTTGAGATTGAGATCCAAGGCTTACGTCAATTATCCTCTGTTTTTGAACTCCCACAGGGACTACCCCCAAAAAGGGTTGTCGATCATCGTATTTTGCTCCACGGAAATCAACAAGCAGTGAATGTTAGACCTTATAGATACACCCACACTCAGAAGATAGAGATTGAGCGCTTGATAAAGGAAATGCTGGCTTCGGGGATTATTTGACCCAACAACAACCCATTCTCTAGCCATGTCCTGTTGGTAAAGAAAAAAGATGGGGGATGGCGTTTCTGTATCGACTATCGGGCCTTGAACAAAGCAACCATCCCAGACAAGTTTTTGATACCTGTGATCGAGGAACTATTAGATGAGCTCTGCGGTTCCAAAGTTTTCTCCAAGCTGGATTTAAAATCAGGTTCGAATGAAGGAAGAAGATATTCCAAAAATGGCTTTTCGTACTCACGAAGGTCATTATGAATTCATGGTAATGCTTTTCGGTCTTACTAACGCGTCAACAACATTTCAATCACTTATGAACCAGGTTTTTCGCCCCTTCCTTCGAACATTCATTCTAGTATTTTTTGATGATATTTTGATTTATAGTTCAGACTATCCTACCCATCTTTTGGAAATCACGTTGGACACCTTAAGCGTGATGGGATTGAATCCCGCAGCGGAAGCAATGCGAATTGCGTTGCTTTCGTTGTGTTACGTTTTTCTTAAATTAACATACATCAAATGATATGTCTTGGTTAAGCATGATAAAGAGAAGGAAATTGCAGCAAGATACTAATCTCTTGAAGAACTCTTCTTCGCGGATTCCTTCTCTCGGTCACGATCTCTACGATCTCTCTAGATCTCCACTACGAACCACGAGCCGAACACCGATCTTGGGACACCTCCACTTGATCTTCTCGGTTGTTCTCCAGCGGATGAGGGAGAGTTGTGGGACTCCTTTTGGATTTTGGGTTTGGAGAAGAGGAGAGAGTTTGAGAGAGAATGAGAGAATTTGCTTTTCTCTTCTTGGTGGATTTCGAAAAAATGAGAATCAATTCCATAGTGAATGCTTGACAATCCACCTTTAAATAGTGGAATATGGTGGAGGTGAAATCTCCACCTATTTACTACTTTACCACAACTATATAATATGCAAATCATATTTGCATACTATATAGTATAAGGTATCACATACCTTATTATACAAATCCCATTTGCATAAATGTGGAATTTAAAATTGAATCACATTCAATTTTATTTCTCTCAAATCAATGTCTCCAACATAAGCCTTAATTTCATAATTAGGCTATTCTATAGTTTATTATGAATCTCATTCACATTAAACTACATATTATGTCAATTATATCTCATATAAACGACATAAATACCCTTTACATGAATTTGAACACTTCAAATTCACTCCAAACTGTATACCCTCATTGAATCCATAATTGAGCCAATCGAGAGATCTAATGGACCTACAGATCATGAGCTCCAATGATCCGAGATTAACTGATCAAACTTTTTGACCCGGTTAATCAGCATTCATTAACTACGGGGGCACTCCACTATAGCCCCGTAGCTGCACTCTCCTCATTGTAGGACAAGTTGTATCCATCGATATAACCAATACCCATGAGTCGATCCTTCACAGGTTGTTCGTAGTCACAGTTGGGTCAAATTACCGTTTTACCCCTGTGCATACCTCTTGCTCCTTAAGTCTCACTGCTCCTCTAATGAACAACTTTGTTGTATGGTCCTACCATAAACAACGTCCTCTCGGGCCAGTGAGAGGGTGGGGCCCCGTTGTTCAAGCCCTAAAGTCAACACTTAAGGGAACAACTTCTCTAGTTTTCCTAGCTCGGGAACGAGTGAATTACATCTTGCGTAGTCAAGTTCTCAACTCTCCACGTGGTTTTGCCCCTGAGAAGGTAGGCATATTGAGCGAGCAACACAGGCCACTCTCACCCATACTAGTCAAAGGATAAATCCCCGCAGACAAGAGTCTGTAACACGTTTAGGATTAAGATCAAGTCAATAATGGTCATCTACGAATTTATTAATCCTAAACTGTTAACGGTGTTACATCAGTTGGTCTAATAATTCACGGTCCGGTCTTGTACAATCTCATTGCAAGGATGCCCCCACTCGCATGTCAACTACATGAACGAGTTGGATCGTCTCGTTTGTATCTAATACAAAGTGGGCCACATCCATAGTGTTACCAGGATGAGGTTCCCAACCCTATCAATATACTGTAGACCACTTGGGTCACTAACTTGAACATGATCCTACCTGTTTGTCCACTACACACCGTTCAAGTTCTCATATATATGACCATGGAGTTTAGTTTATTGGATTAAGTTTATAAAATGCGAGATACAAAGTTTGAATAACAAATAACTTTTAATCATTAATTCAATAACTGTTACAAACGACGCGAGCTTAGGGTATACACCCCAACAAAGGGATCATGCTTTGTTTGCAAACCGAAATAAATGTGTGTTTGGGCAATCACGAATAACATATTTAGGTCACATTATCTCTGAGAATGGAGTCAAAGTAGATGGTGAGAAGATTAAGGCCATGTTAAATTGACCAGTGCCTAAGAACATCAAGGAGTTTCGAGGTTTCCTTGGTTTAACGGCGTATTACAGAACATTCGTGCTGGGATATGGAAGTATTGCAAAGCTGTTGACCCAATTATTAAAGAAGGGCGCATTCCAGTGGTCCAATGAGGCAATCGCAGCTTTTGAAGCCTTGCGACAGGCCATGGTCACCATACTGGTGTTGGCTTTGCTCGATTTCTTCCAGCCATTTGTGATAGAAACTGATGCATCAGAAACATGGGTTGGGGTCGTTCTTTCTCAGAAGCATAGACCGATAGCTTATTTTAGTCATTCTGTCTCGATTGAAGCCAATTTACGAAAGGGAATTAATGGCTATTGTCCTAGCGGTTCAAAAGTGGAGACACTACTTGTTGGGCCAGAAATTCATAGTTTTGACGGATCAGAGAGCATTAGGCAACCTTCTAGAACAGAGGGATGTGCAACCCGAGTACCAACGCTGGCTCACCAAGCTGCTGGGGTATGACTTTGAAATAAAATACAATCCGGGCCAGCTGAACAAGGCGGCGGATGCTTTGTCGAGGGTGGAATATGTAGGGGAGCTCCTATCTATCTCAGTTTCGAATGTCTTGGATGTGAACACCGTGGTCCGCGAAGTGGAAAATGACCTCGAATTGAGGAAGATCTGTGAAGAGTTACAGGTGGATCCTTTATCACACCCCAATTATACCTTGCAGCAGGGGAAGTTATTATACAAGGGGAGGTTGGTTTTGTCCAGTAAGTCGACTTTGATCCCTACCATACTGCACATGTATCATGACTCTGTGATTGGGGGCCATTTCGGTTTCTTAAGCACTTACAAGAGAATGACCAGTGATCTCTTTTGGAAGAACATGAAGTCCGAGGTAAAGCATTACGTAGAGAGGTGTTCGACTTGTCAACGCAACAAGGTTGAAGCGGTGGCTCCCGCGGGGTTATTACAGCCTTTGCCCATCCCCAACCTGATATGGGAAGATATATTGATGGATTTCATCGAGGGGTTGCCCAAATCCATGGGGTTTGATTCAATATTAGTGGTGGTGGACCGTTTAAGTAAGTACAATCATTTCCTGAAAGTCAAGCATCCTTTTTCAACCAAGAATATAGCAGCCTTGTTCATCCAAGAGATAGTACGACTACATGGCTTCCCCAAGTCCATAGTCTCAGATTGGGACAAGATTTTTATAAGCCATTTCTGGAGTGAAATGTTCAAATTACAGGGAACTCAATTAAAGAGGAGTATTGCTTTTCACCCACAAACAGATGGCCAAATGGAAGAAATAAACCGCTGTCTTGAGACATATTTGCGTTGTTTTTGTGGAGAACATCCGAAGAAGTGGGAACAAAGGATTCCTTGGGCTGAATACTGGTACAACACCACATATCACGTATCCACCAACACCACCCCTTTCCATGTTGTTTATGGTTGCCCTCCTCCTCCGATTGTATCCTATGGAAATCACCAAACAACGAATGACTCACTTGAACAACAACTGAAGGAACGAGACTTGGCTTTATTGGCTCTAAAGGAACATTTGCGTATAGCACAAGAACGTATGAAGAAACAAGCAGATCGAAAAAGGAGGGAACTTGAGTTCAAAGAAGGGGAGTTTGTGTATCTGAAGATTCGACCATATCGTCTCAAATCCCTAGCAAGAAAACGATGTGAAAAGTTGTCACCAAAGTATTTTGGTCCCTTCGAAATACTGGAAAGAGTTGGCCAAGTAGCCTATCGACTGGAGCTTCCCATAGATGCAATGGTACATGATGTCTTCCATGTTTCCTTGCTCAAAAAGATGGTTGGCGATGGCATGACAGTGCACCCACAGGTCTCTGACTTATCTGATTGTTATGAGTGGAAAGCTATTCCTCAGGAGGTGCTCGGATGTGGTAGAACTCGGATCTGGGGGAGGAAGAATGGCTTGTCAAGTGGCAAGGAGAACAGGATTGTGAAGCAACGTGGGAGTCGGTTAAAGCTTTTCAACAGATGTTTCCAGATTTTCACCTTGAGGACAAGGTGTTGCTGGCCCTGGGGGGTATTGGTAGGCCTCCTATTACTAAAACATATATTAGGAAGGGTAAAAAGGAGAAAAGAGAGAGTGGGGAGTAACGGTTCATTGGGGACCACTGCTGGGATCGTGGGCTGTTGTACGGTCCTTGTGGGAGTGAGGGTGTATGTTACCAGGAGATTGTCGGGTAGAGGTAGGCAGAAATTGGCTAGTGAGTATTTGCAGGAGAGGTTCTCAGCTCTCTCTAACAGCTGAGTGTTTGGTTCATCTTTTCTTGTAATAGAGGCTCTTGAATGAAGATAATGATACAGTGTTATTTCTATCAATCCTGTATTTTTGTGTTGTTTTTTGTGTTTTCCTGTGTGAAAGGCAGGTTGAAGAGAGGGATACCTAACAGAAGTCTTCTTCTTAATTTTCCACTAAAGTACATAGGCTGATGCAGCTTGCAGTAGATGCACTAGAGACGCTAGAGTACACGAGGAAAAGAACTTCTCAAACAGTTGTGCCTTGCCCTGTTTGATTACAGGGTTTGGAAGTTGCTACAAGTTTTATTTTTAAAGCCTATGTTTATAAAGAACTTTATAGTTGTACATTCAAAATAATTTTTATGATCAAATATGGTTTGCTTTGAATACTTTGGTGCAATTTATTTTATATAATTTGCTAATTAATATTTGTTTCCGCAAAATTGAAAGCCACTTGGTGGAAGAACACAAAATGTGAGGCAAGCTCAAAGTGAGTTATTTTATTCAGGCTTTTGTTCACCTTTTTATCAAGAACATTTTGATTTTGGTGATAGCGATGTTTTTGCATATGCTTCTTCAACTGGCTTATTCTGTGTTACATGCCTTTTTTCTAATTTTTTTCCTAAAAAAACTTTTTAATGTAGGTCCACCATCAAGGACAACGCGAAAAAAAAGACGCTTCAGACCAGGGACAGTGGCATTAAGGGAAATTCGGCAACTCCAGAAATCATGGAATTTGCTAATTCCAGCTAGCCGTTTCATCCGAGCAGTGAGTTTTTTTTTTTTCTCTTGTTCATTTGAATCCAAGTACACCCTTGAATTTATGTTTTCACTAATTTATTTAAGGAGCCAAAAGTAGTTAGCCCCTTAATTACTATTCTAGATAACAGAAACGGCCTAGTTTATGGCACTTACATTTATATACAATGGTTTTAATGCAGTTGGAGGATGCTATGCGATTGTTTAGATAGCCAGTCTTTCATGTTTCCTATCTCATATTGAGATATCTGCTTCTTTGCCATAACAGTAGTCTTGGTGCATATATTCTTTTTTATTAAGAGGTTACTTTAGACCTTTCTGTGACTATTTCTTTCGGATGAAAATATAATTTCAATCAAGAAAGGCGGAACTACAAAAATACAGGAGCCGCCTACCTAGGATAACAGATGCTACAAACCTAGGATAAAGTTCTAAGAAAATATTGGAGGATCAGATGGTTGACTCATGAGATTAATCAAGATGTGCAAATATCAAACAAACTTAGTATTTGAAACCATGACTGAGCATTGAAATCTGCTGAACCCCAGCCCATGTGCCATTTACGAAATTCTCCTCTCTAGCCAAATGTTCCTCACAATAGCCTGATAACCCGCTTGCCAAAAGGAATCCCCTAGTCCTCAAATAGGGTCTGTTAGTTTTGAGTTTTTAAAGACTGAAGAGCAAGAACATTTTACTTGCTTATTTTCTAATTACTTAACTTGGTATTGCTTTTGAAATTTGATCACGTGATAGTGATATTTAATACCTTTGTAGGTGAAAGAAGTAAGCTACCAGTTGGCTCCACAGATTACGCGTTGGCAAGCTGAAGCTTTAATAGCACTTCAGGAAGTAATTGCTTATTTTCTATGGTTTGGTTGAGTGGGCCTTGCTATAACCGTCTACACTAATGAAAAGGATTGTATCTTCCACTTCATATTTACTAGGAAGAAGCAAAGCTATTGTTTAGTTCTTGATTTATATTAAAAGATTTTGGTCGTGTGGTTTAATACTTTGAAATATCTTTTGTTTCCCCAAAACTTTTTTGTTAAGGAACATAGTATAAATATTGGTGGTTTTAATTTATTACCTTGGAACTGATGGTTAAAGGCATCCTTCAATATCTAACTGTGTGCCTCTAGGAACTCAAGCAAGTACTTGGGCAGTTTAGTTTTAACTTGGGCAGTTTAGTTTTAACTTTTAAGCTTATCATGTTCTCATCTAGCTCAGATGGTAGGATTTTGTACTATCCTTAAGTGTAAATTCTATTTCCATGTGACAACTTGAATCACATTGTTTCTTAAAGATGAGAACGAGGTGAAAACATCAAACATTCCTCATGTTTCGTTTGAAGTTGTGGTTTGGACTACTAGAATACTTTCGCTTGACTTTTCTATCAACAAGCATTTAAAGTACGTTGAACAAGCTTTATCCTGCTGTCAAAGTGTTTTTCTTTTTTTAGATCTTAATTTATTCTTGTCCTCTTTATATTTGATCATTGACTCATTGTTATATTTCTATCCATTGCCTGTAGCCTGTGGCTTAAATACTTGGTGTTATTTACAAGAAATTATGATTGAGTTTATTACCAGAATATTTATTCTCACTTTTATGTGGTAATTGGTATTATGATATAATTTTGTTTTTGAGTTAGTTTCTTCAGTTTTTGCTGTTCTGTTACATAGAAAAGATCGATCTATCTATCTATCTATCTATCTATATGTATGTATGTATGTATGTATGTATATATATATATATATATATATTCCTGCAACAAACAACTTACGGACCTGATTCAGGTTTTGCTGTATGTGCAATCTCACACTTTATCACCTGTTTCTATGAAGGCTGATTGTATTTTTCGGAATCTGCTTTGGTTAACTTTTCTTAATATCAAGTAAAATTGTACAATTAAACTTGCGTTTCTTTCATTTGTAGGCAGCAGAAGATTTTTTGGTTCATCTATTTGAAGATACAATGCTATGTGCTATTCATGCCAAGCGTGTAACAATCAGTAAGTCAATTCTTGACATGTTTGTGTTCTTAACATTAACATAGTCTCGCACCCACTGCACCAGCTTTTGCCTTCCCCGCTTTGGATAATATTATCTGTTATGCTATAAGCAGATTATTTTTAAGAAAAGCAATAATATTGAAATCTAGTGTGATAAAGGCAAGAGCACGAGTAGATACTATAGTAAAAAGATACTTTACTTTGGTTTTTCCAAGTTTCTAACTGAAAAAAAGTTAAGAAGAAAAAAGAAAAACCCAGACTGTTAAATTAAAATATTTGAGGTTTTGTTTTCCGTGAATTCGATGAAGGCACTCAACTGGGGAAAACAGTTTTCCTTTCTAGGCTTTATTGATGACATTTGATTTTTCTACACAACGGTCAAAAATCCATTTTTCTAAGCAAGCATATGGACTAAGATAGTTCACTTCTTTTGGCTCGTCATTATATGCTTCTTCAAATTGCTTCATGTGTTAGGAAATAATTACGGATTGTTAGCCTGGTCGGTACTGGATAAATTTCTTTTCAACTTATTTTGGACTTGTCTTGCTTCTTACTTTTCCTTCATTTGTTTCATGTTTCTACATTAGAACTGAATACTCCAGGGTTTGATAATCAGTAACTTTCGACTTGTAAAATAGTTGGGACAGTACAATACTCTTTAACATGATTATGAACTCTGTTAGGTTCCAATTGCCTACCTCATTAGATCTCGTTTTCTGTCATCTTCCAAGTTGCCTATTGATCCTCTGAATGTTATCCATTTCCTTTGTTCTTTTCATTCAGTGAAAAAGGATTTTGAACTGGCACGTCGGTTAGGAGGGAAAGGGAGGCCATGGTAAGAAGATATGTTCATTAGAAAGAGTAGCCATCGTAGCGACACCGACATCACCACATTAACTGGTATGGTAGAATGCCTGCAGTTGATTGCTAGTAATCAGTGTGTACCAATATGTAGAAATTAGGCAGTAGACAAGACCAAAAGTATTTTTTGTTTCCTAGCAATATTTACGCAACGGCCTCTGGAGTTCCGAACCCACATCCGGATCGAATCCAACTCAAAATTTGGAGTTTATATTAGCTATCTTGAAATAGATAATAGGATCCATTCAGCTTTGATTTGATTATTGGCTCTGAGTTGCCGTTGCTGCATTTTCAAGATGATGGCGTAGGGGACAACTTCTGTAGTTGATTTCTGGTTTCAAGTTCAACCATGGCAGAATGGAGGATTGAACTATCAATTTTTAAGATGGTAATTGGTATCTTATCCTACTGAGCTATCTTTAGATTGATTGTAGTTAATTTGTGATTTGTAACTTTGTTTCATTATGTTATCAAAATACAACATTTTGCTGGCAGCTATGCAAAAAAACTAGACACCATTTTTTGGTTAGCTCAAACTATGAAGTGGTAACGAAAA

mRNA sequence

GCCACTTTTGCCCAAAATTGAAACAGCACAGAGCTCCCTCCAATTCTTTTCTGCCTGCTCGTCACTCTCACGCTACTGCTTCTAATTTCAAATCAATGGCGCGGGCAAGGCATCCAGCCCAAAGGAACTCAAATCGCAAGCCATCAGGTACTGGAGCTTCACCGTCTTCCGCAGCTGCGCCGTCGACGCCACTTGGTGGAAGAACACAAAATGTGAGGCAAGCTCAAAGTCCACCATCAAGGACAACGCGAAAAAAAAGACGCTTCAGACCAGGGACAGTGGCATTAAGGGAAATTCGGCAACTCCAGAAATCATGGAATTTGCTAATTCCAGCTAGCCGTTTCATCCGAGCAGTGAAAGAAGTAAGCTACCAGTTGGCTCCACAGATTACGCGTTGGCAAGCTGAAGCTTTAATAGCACTTCAGGAAGCAGCAGAAGATTTTTTGGTTCATCTATTTGAAGATACAATGCTATGTGCTATTCATGCCAAGCGTGTAACAATCATGAAAAAGGATTTTGAACTGGCACGTCGGTTAGGAGGGAAAGGGAGGCCATGGTAAGAAGATATGTTCATTAGAAAGAGTAGCCATCGTAGCGACACCGACATCACCACATTAACTGATGATGGCGTAGGGGACAACTTCTGTAGTTGATTTCTGGTTTCAAGTTCAACCATGGCAGAATGGAGGATTGAACTATCAATTTTTAAGATGGTAATTGGTATCTTATCCTACTGAGCTATCTTTAGATTGATTGTAGTTAATTTGTGATTTGTAACTTTGTTTCATTATGTTATCAAAATACAACATTTTGCTGGCAGCTATGCAAAAAAACTAGACACCATTTTTTGGTTAGCTCAAACTATGAAGTGGTAACGAAAA

Coding sequence (CDS)

ATGGCGCGGGCAAGGCATCCAGCCCAAAGGAACTCAAATCGCAAGCCATCAGGTACTGGAGCTTCACCGTCTTCCGCAGCTGCGCCGTCGACGCCACTTGGTGGAAGAACACAAAATGTGAGGCAAGCTCAAAGTCCACCATCAAGGACAACGCGAAAAAAAAGACGCTTCAGACCAGGGACAGTGGCATTAAGGGAAATTCGGCAACTCCAGAAATCATGGAATTTGCTAATTCCAGCTAGCCGTTTCATCCGAGCAGTGAAAGAAGTAAGCTACCAGTTGGCTCCACAGATTACGCGTTGGCAAGCTGAAGCTTTAATAGCACTTCAGGAAGCAGCAGAAGATTTTTTGGTTCATCTATTTGAAGATACAATGCTATGTGCTATTCATGCCAAGCGTGTAACAATCATGAAAAAGGATTTTGAACTGGCACGTCGGTTAGGAGGGAAAGGGAGGCCATGGTAA

Protein sequence

MARARHPAQRNSNRKPSGTGASPSSAAAPSTPLGGRTQNVRQAQSPPSRTTRKKRRFRPGTVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLAPQITRWQAEALIALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW

Homology

[Close]

BLAST of Tan0018163 vs. ExPASy Swiss-Prot
Match: Q8RVQ9 (Histone H3-like centromeric protein HTR12 OS=Arabidopsis thaliana OX=3702 GN=HTR12 PE=1 SV=3)

HSP 1 Score: 155.2 bits (391), Expect = 5.9e-37
Identity = 96/178 (53.93%), Postives = 114/178 (64.04%), Query Frame = 0


Query: 1   MARARHPAQRNSNR-KPSGTGASPSSAAAPSTPL-------GGRTQNVRQAQSPPSRTTR 60
           MAR +H   R+  R +    GAS S AA P+T         G  TQ      SP + T R
Sbjct: 1   MARTKHRVTRSQPRNQTDAAGASSSQAAGPTTTPTRRGGEGGDNTQQTNPTTSPATGTRR 60

Query: 61  ---------------KKRRFRPGTVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLA-P 120
                          K  R+RPGTVAL+EIR  QK  NLLIPA+ FIR V+ +++ LA P
Sbjct: 61  GAKRSRQAMPRGSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPP 120

Query: 121 QITRWQAEALIALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           QI RW AEAL+ALQEAAED+LV LF D+MLCAIHA+RVT+M+KDFELARRLGGKGRPW
Sbjct: 121 QINRWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLMRKDFELARRLGGKGRPW 178

[Close]

BLAST of Tan0018163 vs. ExPASy Swiss-Prot
Match: Q7RXR3 (Histone H3-like centromeric protein hH3v OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=hH3v PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.6e-26
Identity = 70/133 (52.63%), Postives = 90/133 (67.67%), Query Frame = 0


Query: 22  SPSSAAAP---STPLGGRTQNVRQAQSPPSRTTRKKRRFRPGTVALREIRQLQKSWNLLI 81
           S  +AA P   +TP G R       Q        KKRR+RPGT+AL+EIR  Q++ +LL+
Sbjct: 15  SKKAAAVPTPKATPPGRRKSRASSVQPGDPVPQGKKRRYRPGTLALKEIRNYQRTTDLLV 74

Query: 82  PASRFIRAVKEVSYQLAP--QITRWQAEALIALQEAAEDFLVHLFEDTMLCAIHAKRVTI 141
               F R V+E++ Q  P  +  RWQ++A++ALQEAAE FLVHLFEDT LCAIHAKRVTI
Sbjct: 75  AKLPFARLVREIAMQFRPMDEEMRWQSQAILALQEAAEAFLVHLFEDTNLCAIHAKRVTI 134

Query: 142 MKKDFELARRLGG 150
           M+KD +LARR+ G
Sbjct: 135 MQKDIQLARRIRG 147

[Close]

BLAST of Tan0018163 vs. ExPASy Swiss-Prot
Match: Q0MXD1 (Histone H3-like centromeric protein CSE4 OS=Millerozyma farinosa OX=4920 GN=CSE4 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.8e-24
Identity = 68/113 (60.18%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 42  QAQSPP---SRTTRKKRRFRPGTVALREIRQLQKSWNLLIPASRFIRAVKEV--SYQLAP 101
           Q   PP   S  T  KRR+RPGT ALREIR+ Q+S  LLI    F R VKEV  +Y  A 
Sbjct: 44  QPGDPPTIRSTNTTVKRRYRPGTKALREIRRYQRSSELLIRKLPFARLVKEVAENYIGAD 103

Query: 102 QITRWQAEALIALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGG 150
              RWQ+ A++ALQEA E FLVHL EDT LCAIHAKRVTIM+KD +LARR+ G
Sbjct: 104 YGIRWQSNAVLALQEACEAFLVHLLEDTNLCAIHAKRVTIMQKDIQLARRIRG 156

[Close]

BLAST of Tan0018163 vs. ExPASy Swiss-Prot
Match: Q9Y812 (Histone H3-like centromeric protein cnp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cnp1 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.8e-24
Identity = 60/102 (58.82%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 53  KKRRFRPGTVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLAPQIT-----RWQAEALI 112
           +K+R+RPGT ALREIR+ Q+S +LLI    F R V+E+S +     +     RWQ+ AL 
Sbjct: 18  RKKRYRPGTTALREIRKYQRSTDLLIQRLPFSRIVREISSEFVANFSTDVGLRWQSTALQ 77

Query: 113 ALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGG 150
            LQEAAE FLVHLFEDT LCAIHAKRVTIM++D +LARR+ G
Sbjct: 78  CLQEAAEAFLVHLFEDTNLCAIHAKRVTIMQRDMQLARRIRG 119

[Close]

BLAST of Tan0018163 vs. ExPASy Swiss-Prot
Match: Q59LN9 (Histone H3-like centromeric protein CSE4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=CSE4 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 8.3e-23
Identity = 79/169 (46.75%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 8   AQRNSNRKPSGTGASPSSAAAPSTPLGGRTQNVRQ---------AQSPPSRTT------- 67
           A+R   R+   T  SP   AA S+    +    R          A S P RTT       
Sbjct: 43  AERQQQRQQYRTEQSPIVPAATSSSRYSQFGIYRNQPGDVVDTLASSLPRRTTTTRPEVN 102

Query: 68  ----RKKRRFRPGTVALREIRQLQKSWNLLIPASRFIRAVKEVSYQ-LAPQI-TRWQAEA 127
               R K+R+RPGT ALREIRQ QKS +LLI    F R V+E+S   + P    RWQ+ A
Sbjct: 103 RTVPRVKKRYRPGTKALREIRQYQKSTDLLIRKLPFARLVREISLDFVGPSYGLRWQSNA 162

Query: 128 LIALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           ++ALQEA+E FL+HL EDT LCAIHAKRVTIM+KD +LARR+  +G+ W
Sbjct: 163 ILALQEASESFLIHLLEDTNLCAIHAKRVTIMQKDIQLARRI--RGQSW 209

[Close]

BLAST of Tan0018163 vs. NCBI nr
Match: XP_022156549.1 (histone H3-like centromeric protein HTR12 [Momordica charantia])

HSP 1 Score: 271.6 bits (693), Expect = 4.3e-69
Identity = 140/154 (90.91%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MARARHPAQRNSNRKPSGTGASPSSAAAPSTPLGGRTQNVRQAQSPPSRTTRKKRRFRPG 60
           MARARHPAQRN+NRKP G+G +PSS A PSTPLGGRTQNVRQAQSPP+RT+ KKRRFRPG
Sbjct: 1   MARARHPAQRNANRKPLGSGVAPSSPAGPSTPLGGRTQNVRQAQSPPARTSGKKRRFRPG 60

Query: 61  TVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLAPQITRWQAEALIALQEAAEDFLVHL 120
           TVALREIRQ QK+WNLLIPAS FIRAVKEVSYQLAP+ITRWQAEALIALQEAAEDFLVHL
Sbjct: 61  TVALREIRQFQKTWNLLIPASSFIRAVKEVSYQLAPEITRWQAEALIALQEAAEDFLVHL 120

Query: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
Sbjct: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 154

[Close]

BLAST of Tan0018163 vs. NCBI nr
Match: XP_022959605.1 (histone H3-like centromeric protein HTR12 [Cucurbita moschata] >XP_023005091.1 histone H3-like centromeric protein HTR12 [Cucurbita maxima] >XP_023514272.1 histone H3-like centromeric protein HTR12 [Cucurbita pepo subsp. pepo] >KAG6592914.1 histone H3-like centromeric protein HTR12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 267.7 bits (683), Expect = 6.2e-68
Identity = 141/154 (91.56%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MARARHPAQRNSNRKPSGTGASPSSAAAPSTPLGGRTQNVRQAQSPPSRTTRKKRRFRPG 60
           MARA+HP QRNSNRKPS  GASPSS+AAPSTPL GRTQ+ RQ QSP SRTT KKRRFRPG
Sbjct: 1   MARAKHPTQRNSNRKPSVAGASPSSSAAPSTPLSGRTQSGRQTQSPLSRTTGKKRRFRPG 60

Query: 61  TVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLAPQITRWQAEALIALQEAAEDFLVHL 120
           TVALREIRQLQKSWNLLIPAS FIRAVKEVSYQLAPQ+TRWQAEALIALQEAAEDFLVHL
Sbjct: 61  TVALREIRQLQKSWNLLIPASNFIRAVKEVSYQLAPQVTRWQAEALIALQEAAEDFLVHL 120

Query: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
Sbjct: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 154

[Close]

BLAST of Tan0018163 vs. NCBI nr
Match: XP_038896752.1 (histone H3-like centromeric protein HTR12 [Benincasa hispida])

HSP 1 Score: 264.2 bits (674), Expect = 6.9e-67
Identity = 139/154 (90.26%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 1   MARARHPAQRNSNRKPSGTGASPSSAAAPSTPLGGRTQNVRQAQSPPSRTTRKKRRFRPG 60
           MARARHP QR SNR PSGTGA+ SS AAPSTPL GRTQNV QAQS P RTT+KK+RFRPG
Sbjct: 1   MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPG 60

Query: 61  TVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLAPQITRWQAEALIALQEAAEDFLVHL 120
           TVALREIR LQKSWNLLIPAS FIRAVKEVSYQLAPQITRWQAEAL+ALQEAAEDFLVHL
Sbjct: 61  TVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHL 120

Query: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
Sbjct: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 154

[Close]

BLAST of Tan0018163 vs. NCBI nr
Match: XP_011659153.1 (histone H3-like centromeric protein HTR12 isoform X2 [Cucumis sativus] >KAE8646217.1 hypothetical protein Csa_016289 [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 2.1e-63
Identity = 133/154 (86.36%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 1   MARARHPAQRNSNRKPSGTGASPSSAAAPSTPLGGRTQNVRQAQSPPSRTTRKKRRFRPG 60
           MARARHP +R SNR PSG+GA+ SS  APSTPL GRTQNVRQAQ+  SRT +KK+RFRPG
Sbjct: 1   MARARHPPRRKSNRTPSGSGAAQSSPTAPSTPLNGRTQNVRQAQNSSSRTIKKKKRFRPG 60

Query: 61  TVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLAPQITRWQAEALIALQEAAEDFLVHL 120
           TVAL+EIR LQKSWNLLIPAS FIRAVKEVS QLAPQITRWQAEAL+ALQEAAEDFLVHL
Sbjct: 61  TVALKEIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQEAAEDFLVHL 120

Query: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
Sbjct: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 154

[Close]

BLAST of Tan0018163 vs. NCBI nr
Match: XP_011659152.1 (histone H3-1 isoform X1 [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 8.2e-52
Identity = 115/136 (84.56%), Postives = 123/136 (90.44%), Query Frame = 0


Query: 1   MARARHPAQRNSNRKPSGTGASPSSAAAPSTPLGGRTQNVRQAQSPPSRTTRKKRRFRPG 60
           MARARHP +R SNR PSG+GA+ SS  APSTPL GRTQNVRQAQ+  SRT +KK+RFRPG
Sbjct: 1   MARARHPPRRKSNRTPSGSGAAQSSPTAPSTPLNGRTQNVRQAQNSSSRTIKKKKRFRPG 60

Query: 61  TVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLAPQITRWQAEALIALQEAAEDFLVHL 120
           TVAL+EIR LQKSWNLLIPAS FIRAVKEVS QLAPQITRWQAEAL+ALQEAAEDFLVHL
Sbjct: 61  TVALKEIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQEAAEDFLVHL 120

Query: 121 FEDTMLCAIHAKRVTI 137
           FEDTMLCAIHAKRVTI
Sbjct: 121 FEDTMLCAIHAKRVTI 136

[Close]

BLAST of Tan0018163 vs. ExPASy TrEMBL
Match: A0A6J1DTT5 (Histone H3.2 OS=Momordica charantia OX=3673 GN=LOC111023426 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.1e-69
Identity = 140/154 (90.91%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MARARHPAQRNSNRKPSGTGASPSSAAAPSTPLGGRTQNVRQAQSPPSRTTRKKRRFRPG 60
           MARARHPAQRN+NRKP G+G +PSS A PSTPLGGRTQNVRQAQSPP+RT+ KKRRFRPG
Sbjct: 1   MARARHPAQRNANRKPLGSGVAPSSPAGPSTPLGGRTQNVRQAQSPPARTSGKKRRFRPG 60

Query: 61  TVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLAPQITRWQAEALIALQEAAEDFLVHL 120
           TVALREIRQ QK+WNLLIPAS FIRAVKEVSYQLAP+ITRWQAEALIALQEAAEDFLVHL
Sbjct: 61  TVALREIRQFQKTWNLLIPASSFIRAVKEVSYQLAPEITRWQAEALIALQEAAEDFLVHL 120

Query: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
Sbjct: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 154

[Close]

BLAST of Tan0018163 vs. ExPASy TrEMBL
Match: A0A6J1KTZ4 (Histone H3.2 OS=Cucurbita maxima OX=3661 GN=LOC111498182 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.0e-68
Identity = 141/154 (91.56%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MARARHPAQRNSNRKPSGTGASPSSAAAPSTPLGGRTQNVRQAQSPPSRTTRKKRRFRPG 60
           MARA+HP QRNSNRKPS  GASPSS+AAPSTPL GRTQ+ RQ QSP SRTT KKRRFRPG
Sbjct: 1   MARAKHPTQRNSNRKPSVAGASPSSSAAPSTPLSGRTQSGRQTQSPLSRTTGKKRRFRPG 60

Query: 61  TVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLAPQITRWQAEALIALQEAAEDFLVHL 120
           TVALREIRQLQKSWNLLIPAS FIRAVKEVSYQLAPQ+TRWQAEALIALQEAAEDFLVHL
Sbjct: 61  TVALREIRQLQKSWNLLIPASNFIRAVKEVSYQLAPQVTRWQAEALIALQEAAEDFLVHL 120

Query: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
Sbjct: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 154

[Close]

BLAST of Tan0018163 vs. ExPASy TrEMBL
Match: A0A6J1H6R9 (Histone H3.2 OS=Cucurbita moschata OX=3662 GN=LOC111460630 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.0e-68
Identity = 141/154 (91.56%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MARARHPAQRNSNRKPSGTGASPSSAAAPSTPLGGRTQNVRQAQSPPSRTTRKKRRFRPG 60
           MARA+HP QRNSNRKPS  GASPSS+AAPSTPL GRTQ+ RQ QSP SRTT KKRRFRPG
Sbjct: 1   MARAKHPTQRNSNRKPSVAGASPSSSAAPSTPLSGRTQSGRQTQSPLSRTTGKKRRFRPG 60

Query: 61  TVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLAPQITRWQAEALIALQEAAEDFLVHL 120
           TVALREIRQLQKSWNLLIPAS FIRAVKEVSYQLAPQ+TRWQAEALIALQEAAEDFLVHL
Sbjct: 61  TVALREIRQLQKSWNLLIPASNFIRAVKEVSYQLAPQVTRWQAEALIALQEAAEDFLVHL 120

Query: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
Sbjct: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 154

[Close]

BLAST of Tan0018163 vs. ExPASy TrEMBL
Match: A0A0A0K4F4 (Histone H3.2 OS=Cucumis sativus OX=3659 GN=Csa_7G328280 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.9e-52
Identity = 115/136 (84.56%), Postives = 123/136 (90.44%), Query Frame = 0


Query: 1   MARARHPAQRNSNRKPSGTGASPSSAAAPSTPLGGRTQNVRQAQSPPSRTTRKKRRFRPG 60
           MARARHP +R SNR PSG+GA+ SS  APSTPL GRTQNVRQAQ+  SRT +KK+RFRPG
Sbjct: 1   MARARHPPRRKSNRTPSGSGAAQSSPTAPSTPLNGRTQNVRQAQNSSSRTIKKKKRFRPG 60

Query: 61  TVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLAPQITRWQAEALIALQEAAEDFLVHL 120
           TVAL+EIR LQKSWNLLIPAS FIRAVKEVS QLAPQITRWQAEAL+ALQEAAEDFLVHL
Sbjct: 61  TVALKEIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQEAAEDFLVHL 120

Query: 121 FEDTMLCAIHAKRVTI 137
           FEDTMLCAIHAKRVTI
Sbjct: 121 FEDTMLCAIHAKRVTI 136

[Close]

BLAST of Tan0018163 vs. ExPASy TrEMBL
Match: B7XEI8 (Centromere specific histone H3 variant OS=Nicotiana sylvestris OX=4096 GN=NsCENH3 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.2e-46
Identity = 107/157 (68.15%), Postives = 124/157 (78.98%), Query Frame = 0


Query: 1   MARARHPAQRNSNRKPSGTGASPSSAAAPSTPLGGRT---QNVRQAQSPPSRTTRKKRRF 60
           MAR +H A R  +R PS   A+ S+AAA S+     T    + R A S P RT +KK R+
Sbjct: 1   MARTKHLALRKQSRPPSRPTATRSAAAAASSSAPQSTPTRTSQRTAPSTPGRTQKKKTRY 60

Query: 61  RPGTVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLAPQITRWQAEALIALQEAAEDFL 120
           RPGTVALREIR+ QK+WNLLIPA+ FIR VKE+SY  AP++TRWQAEALIALQEAAEDFL
Sbjct: 61  RPGTVALREIRRFQKTWNLLIPAAPFIRLVKEISYFFAPEVTRWQAEALIALQEAAEDFL 120

Query: 121 VHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           VHLF+D+MLCAIHAKRVT+MKKDFELARRLGGK RPW
Sbjct: 121 VHLFDDSMLCAIHAKRVTLMKKDFELARRLGGKARPW 157

[Close]

BLAST of Tan0018163 vs. TAIR 10
Match: AT1G01370.1 (Histone superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 4.2e-38
Identity = 96/178 (53.93%), Postives = 114/178 (64.04%), Query Frame = 0


Query: 1   MARARHPAQRNSNR-KPSGTGASPSSAAAPSTPL-------GGRTQNVRQAQSPPSRTTR 60
           MAR +H   R+  R +    GAS S AA P+T         G  TQ      SP + T R
Sbjct: 1   MARTKHRVTRSQPRNQTDAAGASSSQAAGPTTTPTRRGGEGGDNTQQTNPTTSPATGTRR 60

Query: 61  ---------------KKRRFRPGTVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLA-P 120
                          K  R+RPGTVAL+EIR  QK  NLLIPA+ FIR V+ +++ LA P
Sbjct: 61  GAKRSRQAMPRGSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPP 120

Query: 121 QITRWQAEALIALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           QI RW AEAL+ALQEAAED+LV LF D+MLCAIHA+RVT+M+KDFELARRLGGKGRPW
Sbjct: 121 QINRWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLMRKDFELARRLGGKGRPW 178

[Close]

BLAST of Tan0018163 vs. TAIR 10
Match: AT1G01370.2 (Histone superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 4.2e-38
Identity = 96/178 (53.93%), Postives = 114/178 (64.04%), Query Frame = 0


Query: 1   MARARHPAQRNSNR-KPSGTGASPSSAAAPSTPL-------GGRTQNVRQAQSPPSRTTR 60
           MAR +H   R+  R +    GAS S AA P+T         G  TQ      SP + T R
Sbjct: 1   MARTKHRVTRSQPRNQTDAAGASSSQAAGPTTTPTRRGGEGGDNTQQTNPTTSPATGTRR 60

Query: 61  ---------------KKRRFRPGTVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLA-P 120
                          K  R+RPGTVAL+EIR  QK  NLLIPA+ FIR V+ +++ LA P
Sbjct: 61  GAKRSRQAMPRGSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPP 120

Query: 121 QITRWQAEALIALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           QI RW AEAL+ALQEAAED+LV LF D+MLCAIHA+RVT+M+KDFELARRLGGKGRPW
Sbjct: 121 QINRWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLMRKDFELARRLGGKGRPW 178

[Close]

BLAST of Tan0018163 vs. TAIR 10
Match: AT1G19890.1 (male-gamete-specific histone H3 )

HSP 1 Score: 102.8 bits (255), Expect = 2.5e-22
Identity = 72/150 (48.00%), Postives = 93/150 (62.00%), Query Frame = 0


Query: 1   MARARHPAQRNSNRKPSGTGASPSSAAAPSTPLGGRTQNVRQAQSPPSRTTRKKRRFRPG 60
           MAR +  A     RK +G G  P    A        T+  R+ + P     ++  RFRPG
Sbjct: 1   MARTKQTA-----RKSTG-GKGPRKELA--------TKAARKTRRPYRGGVKRAHRFRPG 60

Query: 61  TVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLAPQITRWQAEALIALQEAAEDFLVHL 120
           TVALREIR+ QKS +LLI    F R V+E++      + R+Q+ A++ALQEAAE +LV L
Sbjct: 61  TVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKVDL-RFQSHAVLALQEAAEAYLVGL 120

Query: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGK 151
           FEDT LCAIHAKRVTIM KD +LARR+ G+
Sbjct: 121 FEDTNLCAIHAKRVTIMSKDIQLARRIRGE 135

[Close]

BLAST of Tan0018163 vs. TAIR 10
Match: AT1G09200.1 (Histone superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 4.2e-22
Identity = 71/150 (47.33%), Postives = 94/150 (62.67%), Query Frame = 0


Query: 1   MARARHPAQRNSNRKPSGTGASPSSAAAPSTPLGGRTQNVRQAQSPPSRTTRKKRRFRPG 60
           MAR +  A++++  K            AP   L   T+  R++ +P +   +K  RFRPG
Sbjct: 1   MARTKQTARKSTGGK------------APRKQLA--TKAARKS-APATGGVKKPHRFRPG 60

Query: 61  TVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLAPQITRWQAEALIALQEAAEDFLVHL 120
           TVALREIR+ QKS  LLI    F R V+E++      + R+Q+ A+ ALQEAAE +LV L
Sbjct: 61  TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSSAVAALQEAAEAYLVGL 120

Query: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGK 151
           FEDT LCAIHAKRVTIM KD +LARR+ G+
Sbjct: 121 FEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

[Close]

BLAST of Tan0018163 vs. TAIR 10
Match: AT1G75600.1 (Histone superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 4.2e-22
Identity = 71/150 (47.33%), Postives = 95/150 (63.33%), Query Frame = 0


Query: 1   MARARHPAQRNSNRKPSGTGASPSSAAAPSTPLGGRTQNVRQAQSPPSRTTRKKRRFRPG 60
           MAR +  A+++   K            AP T L   T+  R++ +P +   +K  R+RPG
Sbjct: 1   MARTKQTARKSHGGK------------APRTLLA--TKAARKS-APTTGGVKKPHRYRPG 60

Query: 61  TVALREIRQLQKSWNLLIPASRFIRAVKEVSYQLAPQITRWQAEALIALQEAAEDFLVHL 120
           TVALREIR+ QKS  LLI    F R V+E++      + R+Q+ A++ALQEAAE +LV L
Sbjct: 61  TVALREIRKYQKSTELLIRKLPFQRLVREIAQDYKTDL-RFQSHAVLALQEAAEAYLVGL 120

Query: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGK 151
           FEDT LCAIHAKRVTIM KD +LARR+ G+
Sbjct: 121 FEDTNLCAIHAKRVTIMPKDVQLARRIRGE 134

The following BLAST results are available for this feature:

BLAST of Tan0018163 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RVQ9	5.9e-37	53.93	Histone H3-like centromeric protein HTR12 OS=Arabidopsis thaliana OX=3702 GN=HTR...	[more]
Q7RXR3	3.6e-26	52.63	Histone H3-like centromeric protein hH3v OS=Neurospora crassa (strain ATCC 24698...	[more]
Q0MXD1	9.8e-24	60.18	Histone H3-like centromeric protein CSE4 OS=Millerozyma farinosa OX=4920 GN=CSE4...	[more]
Q9Y812	9.8e-24	58.82	Histone H3-like centromeric protein cnp1 OS=Schizosaccharomyces pombe (strain 97...	[more]
Q59LN9	8.3e-23	46.75	Histone H3-like centromeric protein CSE4 OS=Candida albicans (strain SC5314 / AT...	[more]

BLAST of Tan0018163 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156549.1	4.3e-69	90.91	histone H3-like centromeric protein HTR12 [Momordica charantia]	[more]
XP_022959605.1	6.2e-68	91.56	histone H3-like centromeric protein HTR12 [Cucurbita moschata] >XP_023005091.1 h...	[more]
XP_038896752.1	6.9e-67	90.26	histone H3-like centromeric protein HTR12 [Benincasa hispida]	[more]
XP_011659153.1	2.1e-63	86.36	histone H3-like centromeric protein HTR12 isoform X2 [Cucumis sativus] >KAE86462...	[more]
XP_011659152.1	8.2e-52	84.56	histone H3-1 isoform X1 [Cucumis sativus]	[more]

BLAST of Tan0018163 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DTT5	2.1e-69	90.91	Histone H3.2 OS=Momordica charantia OX=3673 GN=LOC111023426 PE=3 SV=1	[more]
A0A6J1KTZ4	3.0e-68	91.56	Histone H3.2 OS=Cucurbita maxima OX=3661 GN=LOC111498182 PE=3 SV=1	[more]
A0A6J1H6R9	3.0e-68	91.56	Histone H3.2 OS=Cucurbita moschata OX=3662 GN=LOC111460630 PE=3 SV=1	[more]
A0A0A0K4F4	3.9e-52	84.56	Histone H3.2 OS=Cucumis sativus OX=3659 GN=Csa_7G328280 PE=3 SV=1	[more]
B7XEI8	4.2e-46	68.15	Centromere specific histone H3 variant OS=Nicotiana sylvestris OX=4096 GN=NsCENH...	[more]

BLAST of Tan0018163 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01370.1	4.2e-38	53.93	Histone superfamily protein	[more]
AT1G01370.2	4.2e-38	53.93	Histone superfamily protein	[more]
AT1G19890.1	2.5e-22	48.00	male-gamete-specific histone H3	[more]
AT1G09200.1	4.2e-22	47.33	Histone superfamily protein	[more]
AT1G75600.1	4.2e-22	47.33	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000164	Histone H3/CENP-A	SMART	SM00428	h35	coord: 49..152 e-value: 2.8E-42 score: 156.4
IPR000164	Histone H3/CENP-A	PANTHER	PTHR11426	HISTONE H3	coord: 13..154
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..151 e-value: 4.7E-45 score: 154.8
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 23..148
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 30..147 e-value: 6.6E-34 score: 117.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..47
None	No IPR available	PANTHER	PTHR11426:SF223	HISTONE H3-LIKE CENTROMERIC PROTEIN HTR12	coord: 13..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0018163.1	Tan0018163.1	mRNA
Tan0018163.2	Tan0018163.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0006996	organelle organization
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity