Tan0018122 (gene) Snake gourd v1

Overview


Name	Tan0018122
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RAB GTPase homolog A4D
Location	LG03: 47495221 .. 47499821 (+)
RNA-Seq Expression	Tan0018122
Synteny	Tan0018122

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTCGCTCCCTTTTCAATCTCTTTTTCTCCTCTTCCTTCATCTTTTTCAATTCCCTTTTCACAGCTTTCCAAAATCACACACAATTCTCTGAAATTCCCTTCAAACCCCAGCTCTGATTTCAATTCAATTTTCCCTTCAACTATTTTGCCCCACATTTCTCTTTTTGGGTCGAATTTGAGGGAATGATTGATTGATTCTTCAGCTTCGTGTTTGATTTAGGGCTTTCCCACTAGTTATTATGATCGGAAAATGGGAAATTTCTTTGTGTCGTAATGTTGTTATTCGTCTAATCTTCGCTTTTTAGAGCTGGGTTTGTGGGGGATTTTGAAGAGAAAAGAGAATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTACGTTTTCAAAGTTGTGTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTCCTTGCGCGATTTTCACGGAATGAATTTAGCGTTGATTCGAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTTGTCATTGATCAGAAAACAGTGAAAGCTCAGATATGGGATACTGCTGGACAAGAAAGGTTTGTGTCTAATACCTTTTTTCCTCCTTTTCTTTTGTGGGGTTAATTGTTCTTGTTTTGTTTCTGTTGGAGTACTTCATTGCTCAAGGTTTGGATCTGTGATAGCTTTGAGAAATGGAAAATGGATTGTAATTAATATGTTGAGTAGATGAATGATTATATGATAGGAGATACAATTAGACAACAAAGAGTTTGGAAGCCTTGAATAGAAATGAAACTAGTTTTGTGGTGGTTTTCTCTGTACTCCCAAATTCAGAGAGAATGCAGATATCTATTTGTGTCTGAATGCAGTTGTGGGCATTGGAATTGTGTTCAAGTTCCATTTTATGCTGTTGGGTAAAAGCTTAAGTCATCTCCTGTAAATTAGGCTGGTCTACTTTAAATTATAGTATTTGGATTGAAAGGAATGTCAATCATGGTGAAAAGCCAAGTCTTAGGAGGAAATCTTCAGAAGAAGTGAAACATGTTAGACAATGATGTCTAGTTGAAGTTGTTTTTCACTCATTTTAGAATTGTCATTGGGCAGATTTCCTCCTCCGCATAAGTTGTTCATATTAGGTTTTTCTGTTTCTTTTTTATTATATTTCGCTGCAGCTATGCTGCAATCTTGTGCTATTTCAGATTAAATTAAATTATTGTGATAGGATTAGTAAGCTCAAGTATGCTTGGAAAAGAAATGAGAGAATGAGTTGCTAGAAGAAAGCTAATGTGAAGATGAAGGGTCTGAATTACATGGGACGGAGGTAGTTGGGAGTGTTGTGGTCCATCAAATGGGAATGCATATACAAGGGGAGAGAGGTAAGCATAAATGTGAGAGAAGGAAGACGGGAGAGTTATGAAAAAGCTGTGTGAAGTCAGCGGCAGTTGAAGACATCTCTCCAGGTTGCAACGTTTTTTTACTTTGGTTCAGAAGATTAATACAAAAGTGTCTTTCCCGTTTGGGAAGGAATATCAAATTGCTATTAGAGCATTTTATTAGGGATTTCTACAGCGAGAAATATGGATAGTAGAACGGAGGATTTGAAATTGTAATTGGGATCAGTTGTTTGGTCAGTAAGATGGATAAATTGCTGCAGCAAAGGGAGGTGGAACAATTGGCTACGAATAGAGGCATTCTTGATGAGGGGCAGGCGGTTGTCAAGCAGTTGAATGAAGGAAAGGCTAGTGGCATGGTGAGGAGGAGGGCGAGCATGAATGAACTAACCACAAGAAGGCTAGAGCTGCCTCAATTCAATGGAGTTGATACAGATGGATGGATGGATCTTTCAAGCAAAAGGAGATTTCGAGGTTAATCAGCACGTGTTGGAAGAATGGAGTTAACCACAAGAAGGCTAGAGCTGCCTCAATTCAATGGAGTTGATACAGATGGATGGATGGATCTTTCAAGCAAAAGGAGATTTCGAGGTTAATCAGCACGTGTTGGAAGAATGGATGGAAATTCTGGGGATCAGTATGGTGAGAGAGGTCTTGCTTGGTATGGGTGGATGGAGAATAGTCAACTTTCTAGCACTGGGTGAAGTTCAAGCTGTTGATGATAGATCGATTTCTTAAGAAGCAGGAAGGAACACTATATGAGCATTTAATAGCTTTGCAACAAGAGGACAGCTTGCATGAGAACAGGAAGATGTTCGAAAGCTTAGCAGCTCCTCAGCTTCACATACCTGATACCGTGGTTAACCCTGTAAATGGATTGAAGCTAGAGACTTGGGCTGACGTTTTGATGTTGAAGCCCATAGGCCTAGCATTGGTGATGGAAATGGCCTAATCAGCAGAGAACAGGAACCAGTTAGTGAAGCAGGGTAAAGGCACAAAGCAGGCAGGGGTGGACTTTGGATCACTCATACAGGTTGGAAGTAACAGCTAGGAAAACCCAGTATGTACCTATGAAACTGAGTACTTCCCCTACTGAGTGGAGTTATATGACCAGGTACAACAATATAACAATGTAAAGGACACCCCGTACAAATGTCTGGCTATGCTGAGTTGCAGTGGTGCAGAAAGAAAGGAAAATGTTTCTGGTGTAAAGGAAAGTATATGATAGGCCACCACCATAATAACAAGGAGTTGAAAATCCTGTTAGCCCAGCACGATCAGGGACATATGCTACCTCTTTGGTATGTTATGGAACCTTCTTAGTCCCCTTTCATCAGTGGAGGGACCGACTCTTACAAAACCAAGATGTTGCTTTGGGTGATCTTAAGTTCAGCTCATTAGAGCCCAGCAGATTATGAGGGATACTGTAGACATGCACAGATGCGATACTTCTTTTCATTTTGGGGGCATGGTGTACATGAACTCCATTTTTATAGGCTGTTGACTTTGGCTTGAAAAAGAAACGAAAAGTTAGCTCCTCTGTATATGGGTCATGTCAAGTTGAATGCATCGGCGAGGTTGCTAATCAGCTGAAGCTTCTACCTTCCAAAGGCATACATTTGGTATTCCATGTCTCCCAGCCCAAATTGGCCAAAGGACGTATTTTGGCAAGGCTCCAATGCCCACCACAGCTCAGTACAACAAAATCCAACTTATCTCTCGCTGTTGTGCTTGGGATGCGATCTTCTCCTAATTCTCCTTTAGAACAACTTAGAACTAATTCAATGGTTTGGCAGACCAATTGAGGGTCCTCAAGGTGAAAGTTTGGACGGGAATTGATTGAATTGATAAGCCACAAATTCGTTGTAACCAGAACGGTGTGACCTATGTAGGATCCAGTTAGTTTGGAGTGGAGTAGTAGAGCCTACCTTTTGCAGTTCTGTTATGACTAGATGGGAATGCAAACGTGAGGCGAGTGAGGTATGCATAGACGTGAGAGAAGGAAAAAAGGAGAGTTGTGGAAAAGTTTAGTAGAATCAAGGAGAGTTCTACTTTTGTTTAGAAGATTAATCCACAAGTATCTTTCCCATTTGGAGAGTTCTATCATATTGTTCATGGAAAGAGGTCGTAGAAAGAAATAGTAGGAAAATGTACATCAATTTTTATTTTGTAATTTCTTGCAGTTGAGCAAAAATATTTCAGTAAATACAATGAATGAATTTTATTGAATGCACACTTGGGGATGCTTGTAACTTGTAAAAGATTGTTGGCATTTGATTTTCAGGTGGAAGAGATATCTAGTAAAGAAATTTGAAGGATGTTAAATACAGAACTTGTAAATAAGAAAAAACGATATTCATTAGAAGTCTGATGATCAAATGTTTCTAGCTCTGTTACACATATTAGATCTGCTTACTTCGATATGAAACGGAGAAGTAATGCTATCTTGACTCCAATAAATTAAAAGATTGTTAATTTATTAGATTGTTAGCTCTGTTTCTACTTTTTGACCTGGTCAGGTTCTTGTTTGAATTCTTAAAAGATCTAACATCATATCCTGATTAAATAACACGTATAAATTCCGATGTTGTCATGTACTTACATTTAAGTTCGTTATAGTTTCTGAGGATATCTTGTTTTCCCTCGTTGCCAGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCCATGCTAGTTTATGATATGACGAAGCGCCAGTCATTCGACCACATGGCAAGGTGGCTGGAGGAACTAAGAGGGCATGCTGATAAGAACATTGTTATAATGCTCATCGGAAACAAGTGCGACTTAGGAAGCCTCCGAGCGGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACATCAGCTCTGGAGTCGACGAACGTTGAAACTGCATTCTTCACAATTCTAACAGAGATATATAGGATAATCAGCAAGAAGAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTGCAAATCCAGCACTGTTTAAAGGGACTAATATAGTTGTTCCTGGACAGGACCAGGATTCCGGGAGAAAAGGGTGTTGCTTTGCCTCATGAATTTCACATAATTCAATGATCATTTCAGTTGGGACCTTGTTTTTCTATTCCACTTGGATTTATACTAAGAAAAAAAAAATCATGTATTAGTATTTTGTAGAGACTGGCTTGATACCATGG

mRNA sequence

CTTCTCGCTCCCTTTTCAATCTCTTTTTCTCCTCTTCCTTCATCTTTTTCAATTCCCTTTTCACAGCTTTCCAAAATCACACACAATTCTCTGAAATTCCCTTCAAACCCCAGCTCTGATTTCAATTCAATTTTCCCTTCAACTATTTTGCCCCACATTTCTCTTTTTGGGTCGAATTTGAGGGAATGATTGATTGATTCTTCAGCTTCGTGTTTGATTTAGGGCTTTCCCACTAGTTATTATGATCGGAAAATGGGAAATTTCTTTGTGTCGTAATGTTGTTATTCGTCTAATCTTCGCTTTTTAGAGCTGGGTTTGTGGGGGATTTTGAAGAGAAAAGAGAATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTACGTTTTCAAAGTTGTGTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTCCTTGCGCGATTTTCACGGAATGAATTTAGCGTTGATTCGAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTTGTCATTGATCAGAAAACAGTGAAAGCTCAGATATGGGATACTGCTGGACAAGAAAGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCCATGCTAGTTTATGATATGACGAAGCGCCAGTCATTCGACCACATGGCAAGGTGGCTGGAGGAACTAAGAGGGCATGCTGATAAGAACATTGTTATAATGCTCATCGGAAACAAGTGCGACTTAGGAAGCCTCCGAGCGGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACATCAGCTCTGGAGTCGACGAACGTTGAAACTGCATTCTTCACAATTCTAACAGAGATATATAGGATAATCAGCAAGAAGAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTGCAAATCCAGCACTGTTTAAAGGGACTAATATAGTTGTTCCTGGACAGGACCAGGATTCCGGGAGAAAAGGGTGTTGCTTTGCCTCATGAATTTCACATAATTCAATGATCATTTCAGTTGGGACCTTGTTTTTCTATTCCACTTGGATTTATACTAAGAAAAAAAAAATCATGTATTAGTATTTTGTAGAGACTGGCTTGATACCATGG

Coding sequence (CDS)

ATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTACGTTTTCAAAGTTGTGTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTCCTTGCGCGATTTTCACGGAATGAATTTAGCGTTGATTCGAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTTGTCATTGATCAGAAAACAGTGAAAGCTCAGATATGGGATACTGCTGGACAAGAAAGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCCATGCTAGTTTATGATATGACGAAGCGCCAGTCATTCGACCACATGGCAAGGTGGCTGGAGGAACTAAGAGGGCATGCTGATAAGAACATTGTTATAATGCTCATCGGAAACAAGTGCGACTTAGGAAGCCTCCGAGCGGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACATCAGCTCTGGAGTCGACGAACGTTGAAACTGCATTCTTCACAATTCTAACAGAGATATATAGGATAATCAGCAAGAAGAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTGCAAATCCAGCACTGTTTAAAGGGACTAATATAGTTGTTCCTGGACAGGACCAGGATTCCGGGAGAAAAGGGTGTTGCTTTGCCTCATGA

Protein sequence

MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGANPALFKGTNIVVPGQDQDSGRKGCCFAS

Homology

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BLAST of Tan0018122 vs. ExPASy Swiss-Prot
Match: Q9LH50 (Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 1.5e-105
Identity = 192/220 (87.27%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF TILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGANPALFKGTNIVVPGQDQDSGRKGCC 221
           SKKSL A ++ D   N +L KGT I++P + +   R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

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BLAST of Tan0018122 vs. ExPASy Swiss-Prot
Match: Q9FE79 (Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 5.6e-97
Identity = 175/223 (78.48%), Postives = 200/223 (89.69%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLLARFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F T+LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGEEIDIGANPALFKGTNIVVPGQDQDSGRKGCCFAS 224
           SKK+L A EE + G + +L +GT IVV G++ +S  KGCC  S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS 223

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BLAST of Tan0018122 vs. ExPASy Swiss-Prot
Match: P25766 (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 SV=2)

HSP 1 Score: 354.4 bits (908), Expect = 9.6e-97
Identity = 177/219 (80.82%), Postives = 194/219 (88.58%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG+  QKIDYVFKVVLIGDSAVGK+QLLARF+RNEF++DSKATIGVEFQT+TL ID +TV
Sbjct: 8   YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKNIVIM
Sbjct: 68  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 127

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
           LIGNK DLG+LR VPTEDA+EFAERENLFFMETSALESTNVE AF T+LTEIYRI+SKK+
Sbjct: 128 LIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKN 187

Query: 185 LAAGEEIDIGANPALFKGTNIVVPGQDQDSGRKGCCFAS 224
           L A EE+D   N +L KGT IVVPGQ+     K  C  S
Sbjct: 188 LVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226

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BLAST of Tan0018122 vs. ExPASy Swiss-Prot
Match: Q40191 (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.6e-88
Identity = 167/221 (75.57%), Postives = 190/221 (85.97%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD N KIDYVFKVVLIGDSAVGK+Q+LARF+RNEFS+DSK+TIGVEFQT+TLVID KTV
Sbjct: 7   YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
           LIGNKCDL + R VPTEDA+EFAE+E LFF+ETSALE+TNVE+AF T+LTEIY I++KKS
Sbjct: 127 LIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKS 186

Query: 185 LAAGEEIDIGANPALFKGTNIVVPGQDQD--SGRKGCCFAS 224
           LAA E    G N A   G  I++PG  Q+  + R  CC AS
Sbjct: 187 LAADESQGNG-NSASLSGQKIIIPGPAQEIPAKRNMCCQAS 226

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BLAST of Tan0018122 vs. ExPASy Swiss-Prot
Match: Q40520 (Ras-related protein Rab11C OS=Nicotiana tabacum OX=4097 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.6e-86
Identity = 161/221 (72.85%), Postives = 189/221 (85.52%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           M++ YGD +QKIDYVFKVVLIGDSAVGKTQ+LARF+RNEFS+DSKATIGVEFQT+TLVI 
Sbjct: 1   MASGYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQ 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            K+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HAD+N
Sbjct: 61  HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIML GNK DL   RAVPTEDA+EFA++E LFF+ETSA+E+T +E AF T+LTEI+ I+
Sbjct: 121 IVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIV 180

Query: 181 SKKSLAAGEEIDIGANPALFKGTNIVVPGQDQ-DSGRKGCC 221
           +KK+LAA +E    +NPA   G  I+VPG  Q   G+K CC
Sbjct: 181 NKKNLAA-DENQSNSNPASLTGKKILVPGPGQVIPGKKACC 220

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BLAST of Tan0018122 vs. NCBI nr
Match: XP_038881448.1 (ras-related protein RABA4d [Benincasa hispida])

HSP 1 Score: 440.7 bits (1132), Expect = 7.8e-120
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGANPALFKGTNIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGEEIDIG+NP LFKGTNIVVPGQDQDSGRKGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPGLFKGTNIVVPGQDQDSGRKGCCFAS 223

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BLAST of Tan0018122 vs. NCBI nr
Match: XP_004150166.1 (ras-related protein RABA4d [Cucumis sativus] >KGN53823.1 hypothetical protein Csa_014745 [Cucumis sativus])

HSP 1 Score: 440.3 bits (1131), Expect = 1.0e-119
Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGANPALFKGTNIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGEEIDIG+NPALFKGT+IVVPGQDQDSGRKGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 223

[Close]

BLAST of Tan0018122 vs. NCBI nr
Match: XP_008460801.1 (PREDICTED: ras-related protein RABA4d [Cucumis melo] >KAA0053214.1 ras-related protein RABA4d [Cucumis melo var. makuwa])

HSP 1 Score: 439.9 bits (1130), Expect = 1.3e-119
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGANPALFKGTNIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGEEIDIG+NPALFKGTNIVVPGQDQDSG KGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTNIVVPGQDQDSGTKGCCFAS 223

[Close]

BLAST of Tan0018122 vs. NCBI nr
Match: XP_022925137.1 (ras-related protein RABA4d [Cucurbita moschata] >XP_023518611.1 ras-related protein RABA4d [Cucurbita pepo subsp. pepo] >KAG7027618.1 Ras-related protein RABA4d [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 431.8 bits (1109), Expect = 3.6e-117
Identity = 217/223 (97.31%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGANPALFKGTNIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGTNIVVPGQDQ  GRKGCCFAS
Sbjct: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCCFAS 223

[Close]

BLAST of Tan0018122 vs. NCBI nr
Match: XP_022966454.1 (ras-related protein RABA4d [Cucurbita maxima])

HSP 1 Score: 430.3 bits (1105), Expect = 1.0e-116
Identity = 216/223 (96.86%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGANPALFKGTNIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGTNIVVPGQ+Q  GRKGCCFAS
Sbjct: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 223

[Close]

BLAST of Tan0018122 vs. ExPASy TrEMBL
Match: A0A0A0KW90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152280 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 4.9e-120
Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGANPALFKGTNIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGEEIDIG+NPALFKGT+IVVPGQDQDSGRKGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 223

[Close]

BLAST of Tan0018122 vs. ExPASy TrEMBL
Match: A0A5A7UD85 (Ras-related protein RABA4d OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1192G00440 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 6.4e-120
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGANPALFKGTNIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGEEIDIG+NPALFKGTNIVVPGQDQDSG KGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTNIVVPGQDQDSGTKGCCFAS 223

[Close]

BLAST of Tan0018122 vs. ExPASy TrEMBL
Match: A0A1S3CDP9 (ras-related protein RABA4d OS=Cucumis melo OX=3656 GN=LOC103499562 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 6.4e-120
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGANPALFKGTNIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGEEIDIG+NPALFKGTNIVVPGQDQDSG KGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTNIVVPGQDQDSGTKGCCFAS 223

[Close]

BLAST of Tan0018122 vs. ExPASy TrEMBL
Match: A0A6J1EAZ2 (ras-related protein RABA4d OS=Cucurbita moschata OX=3662 GN=LOC111432472 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.7e-117
Identity = 217/223 (97.31%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGANPALFKGTNIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGTNIVVPGQDQ  GRKGCCFAS
Sbjct: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCCFAS 223

[Close]

BLAST of Tan0018122 vs. ExPASy TrEMBL
Match: A0A6J1HTU8 (ras-related protein RABA4d OS=Cucurbita maxima OX=3661 GN=LOC111466102 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 5.1e-117
Identity = 216/223 (96.86%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGANPALFKGTNIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGTNIVVPGQ+Q  GRKGCCFAS
Sbjct: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 223

[Close]

BLAST of Tan0018122 vs. TAIR 10
Match: AT3G12160.1 (RAB GTPase homolog A4D )

HSP 1 Score: 383.6 bits (984), Expect = 1.0e-106
Identity = 192/220 (87.27%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF TILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGANPALFKGTNIVVPGQDQDSGRKGCC 221
           SKKSL A ++ D   N +L KGT I++P + +   R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

[Close]

BLAST of Tan0018122 vs. TAIR 10
Match: AT5G47960.1 (RAB GTPase homolog A4C )

HSP 1 Score: 355.1 bits (910), Expect = 4.0e-98
Identity = 175/223 (78.48%), Postives = 200/223 (89.69%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLLARFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F T+LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGEEIDIGANPALFKGTNIVVPGQDQDSGRKGCCFAS 224
           SKK+L A EE + G + +L +GT IVV G++ +S  KGCC  S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS 223

[Close]

BLAST of Tan0018122 vs. TAIR 10
Match: AT5G65270.1 (RAB GTPase homolog A4A )

HSP 1 Score: 310.5 bits (794), Expect = 1.1e-84
Identity = 159/219 (72.60%), Postives = 186/219 (84.93%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD +QKIDYVFKVVLIGDSAVGK+Q+LAR++R+EFS+DSKATIGVEFQT+TLVID K+V
Sbjct: 7   YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
           LIGNK DL   RA+PTEDA+EFAE+E LFF+ETSA  +TNVE+AF T+LTEI+ I++KKS
Sbjct: 127 LIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKS 186

Query: 185 LAAGEEIDIGANPALFKGTNI-VVPGQDQDSGRKG--CC 221
           LAA E+ + G NP    G  I +VPG  Q    K   CC
Sbjct: 187 LAASEDQENG-NPGSLAGKKIDIVPGPGQVIPNKSNMCC 224

[Close]

BLAST of Tan0018122 vs. TAIR 10
Match: AT4G39990.1 (RAB GTPase homolog A4B )

HSP 1 Score: 300.8 bits (769), Expect = 8.9e-82
Identity = 151/221 (68.33%), Postives = 184/221 (83.26%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG  + K+DYVFKVVLIGDSAVGK+QLLARF+R+EFS+DSKATIGVEFQT+TL I+QK++
Sbjct: 7   YGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSI 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+H+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
           LIGNK DL   RAVPTEDA+EFAE+E LFF+ETSAL +TNVE +F T++T+IY  ++KK+
Sbjct: 127 LIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKN 186

Query: 185 LAAGEEIDIGANPALFKGTNIVVPGQDQDSGRK--GCCFAS 224
           LA+  + +   NP    G  I++PG  Q+   K   CC +S
Sbjct: 187 LASEGDSN---NPGSLAGKKILIPGSGQEIPAKTSTCCTSS 224

[Close]

BLAST of Tan0018122 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 268.9 bits (686), Expect = 3.8e-72
Identity = 134/215 (62.33%), Postives = 174/215 (80.93%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQI 68
           +++ DY+FKVVLIGDS VGK+ LL+RF+RNEF ++SK+TIGVEF T+TL ++ +TVKAQI
Sbjct: 6   DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGN 128
           WDTAGQERYRA+TSAYYRGA+GA+LVYD+TK  +F++++RWL+ELR HAD NIVIMLIGN
Sbjct: 66  WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125

Query: 129 KCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAG 188
           K DL  LRAV TEDAQ +AE+E L F+ETSALE+ NVE AF TIL+E+YRIISKKS+++ 
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSD 185

Query: 189 EEIDIGANPALFKGTNIVVPGQDQDSGRKGCCFAS 224
           +     AN  + +G  I V    + + +K CC +S
Sbjct: 186 QTT---ANANIKEGQTIDVAATSESNAKKPCCSSS 217

The following BLAST results are available for this feature:

BLAST of Tan0018122 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LH50	1.5e-105	87.27	Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1	[more]
Q9FE79	5.6e-97	78.48	Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1	[more]
P25766	9.6e-97	80.82	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 S...	[more]
Q40191	1.6e-88	75.57	Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1	[more]
Q40520	2.6e-86	72.85	Ras-related protein Rab11C OS=Nicotiana tabacum OX=4097 GN=RAB11C PE=2 SV=1	[more]

BLAST of Tan0018122 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881448.1	7.8e-120	99.10	ras-related protein RABA4d [Benincasa hispida]	[more]
XP_004150166.1	1.0e-119	99.10	ras-related protein RABA4d [Cucumis sativus] >KGN53823.1 hypothetical protein Cs...	[more]
XP_008460801.1	1.3e-119	99.10	PREDICTED: ras-related protein RABA4d [Cucumis melo] >KAA0053214.1 ras-related p...	[more]
XP_022925137.1	3.6e-117	97.31	ras-related protein RABA4d [Cucurbita moschata] >XP_023518611.1 ras-related prot...	[more]
XP_022966454.1	1.0e-116	96.86	ras-related protein RABA4d [Cucurbita maxima]	[more]

BLAST of Tan0018122 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW90	4.9e-120	99.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152280 PE=4 SV=1	[more]
A0A5A7UD85	6.4e-120	99.10	Ras-related protein RABA4d OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3CDP9	6.4e-120	99.10	ras-related protein RABA4d OS=Cucumis melo OX=3656 GN=LOC103499562 PE=4 SV=1	[more]
A0A6J1EAZ2	1.7e-117	97.31	ras-related protein RABA4d OS=Cucurbita moschata OX=3662 GN=LOC111432472 PE=4 SV...	[more]
A0A6J1HTU8	5.1e-117	96.86	ras-related protein RABA4d OS=Cucurbita maxima OX=3661 GN=LOC111466102 PE=4 SV=1	[more]

BLAST of Tan0018122 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12160.1	1.0e-106	87.27	RAB GTPase homolog A4D	[more]
AT5G47960.1	4.0e-98	78.48	RAB GTPase homolog A4C	[more]
AT5G65270.1	1.1e-84	72.60	RAB GTPase homolog A4A	[more]
AT4G39990.1	8.9e-82	68.33	RAB GTPase homolog A4B	[more]
AT1G09630.1	3.8e-72	62.33	RAB GTPase 11C	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 154..176 score: 43.15 coord: 16..37 score: 50.9 coord: 39..55 score: 34.43 coord: 119..132 score: 52.08 coord: 57..79 score: 53.74
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 e-value: 0.0015 score: 5.3
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..215 e-value: 2.4E-6 score: 37.1
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..179 e-value: 3.5E-26 score: 103.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..179 e-value: 1.7E-105 score: 366.5
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 1..221
None	No IPR available	PANTHER	PTHR47978:SF27	BNAA05G26830D PROTEIN	coord: 1..221
None	No IPR available	PROSITE	PS51420	RHO	coord: 9..180 score: 9.322985
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..220 score: 35.839737
None	No IPR available	CDD	cd01868	Rab11_like	coord: 13..177 e-value: 1.21246E-124 score: 347.625
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 18..175 e-value: 2.6E-11 score: 25.3
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 17..177 e-value: 2.1E-61 score: 206.3
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 10..223 score: 17.58395
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..171 e-value: 2.0E-36 score: 123.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 8..220 e-value: 3.9E-70 score: 237.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0018122.1	Tan0018122.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080092	regulation of pollen tube growth
cellular_component	GO:0045177	apical part of cell
cellular_component	GO:0070382	exocytic vesicle
cellular_component	GO:0090404	pollen tube tip
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019900	kinase binding