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Tan0018106 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTTATTTTTAATTTAATTTAATTTTTTAATAATTAACAAATCCGATTCCCCCTGTCTCCATGCCCCCTCTTATAACTCACGCTCCTCGTCTCCTTCACCTTCCTTCCTCCCCATTTCTCTCTCCTCTGAAAATTTTCTCGGGAAAATTCTCCCAACCACAACCTTCTCTCTTCTTACACTTCTCTTCCTTCAGGTATAATTTCTCTCCATGGTTTTTTTTTTCTTCTTCTTCTTCTTTGACTCTGTTTCTCGTTGATTCTAACTTCCATGGTCTTCCACCTCAAACTTTGAATTTTCAGATCTATGAACAACACAATCATTTCCCAGTTTTGTAAGCTTTCTCATGAATCAGCTTTTTAAAAAACCCTAATTTCTGGTGAAGAAATTACTTGCTAGATCTATCGGTTTTTTTTCCTCTGTTTGTTTACAAGATGTGAAGTTGAACTGCTTGGCATCGATCTCAGCTGTAAATTGATTTGTTTGACCAGATCTTGTTCTTCCTCTGTTTGTTATCCTTCTGCAAGTTTCTCAGATTTTTTTTTTAAATTATAAAAAAAAACCCATCTTCAAAACTTGGGTCTTTTTTTTCTTTTTCTCTTACATCTAAACAGGGTTATTGTTTTGTCCGTACTTACAGAGAGAAAATTTTTAGAAGAAAATGAACCAGGTGGCAGTTCAACAGAACGCGTTTTCAGTTCATGAAGAGATGCTGAGCGCCGTCGCTGCTGACCGCCGTGAACGAGTGGTTTGCCCAAAACCCCGCCGTCTCGGACTCATTAACTCCACCGTCAACGACAACCCATTTAGACACCGTTTTGATTCCATAGCTGCCAGCGATGCTTTGGATCTTCTCTTCTTTAAGGTACAGAAGTTTGCTTCAAATTGTTAAAATTCAATTTGATCCAACACGAGGGTTAATTAAATTTTTGCGTGTGCTTTGTAGGGTGGTTGTGGATTAGAGAATCTTAACAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTTTTTATGTGGGTCGCCGCCGAGCAGAGTAGCTAACCCATTAATTCAAGACGCTCGATTTGGGGACGAGAAGCCCAAGCTTCTCCCCCTCTTCTCGCCGGCGGCGGCGGCGGCTCCTCCTCCGTCGTCGCCGCCACCATCGGCCGGTCGGAAAGGCGGCTGTGTTCGGTCAAACTTCGGTAACAACCCGGCGGTTAGAATCGAGGGGTTCGATTGCCGTTTGGACAGGGAGAGGCAAAACCGCAGCATCCCTGCGCTGGCTTAAAAACCGAACCGATCCAGCCCTAGCCGAGCCGAGCCGAGCCGAGCCGAGCCGATTCAATGATGATGATGAAGAAAAAAACACATGAGTTTTTATTATTTTTTTCCACAAATTCAAAATTTAAAATTTAAAGTGAAATTTTGAAAAAAGAACCTTTTTGACCAAAACATCCATTATTGTAAATAATGTGAAAAGGAAATCAAAGTAAATATTATGTGAAGGAAAAGGGGGCCTTGTTAGGTATCTTTCTATTTAGTAGAGTTGAGGCTTTGAGAGAGAGTCCTTGTGTTGACCAAAGGAAAATAAAAGAGAGAGATTATTCTTAGGATTTTGTGAATTGAGAGAAAGAATTTGTCTCTCTTTTTCTCTACTCTATTTTGTAATATAAGCTTTTTTTTTTCTTTTTTCCCTTTAGGAGTGTCTAAGGTTGTTTGTTTAATTTAAGGGAAATTTTTTTTTGCAGCTTGTGAATGAGAAAACATGTACAAATTGAAGCTGCAAATTCAGTATCAATGACAAGTATTCCAATGTGAATTTTTCCA GTTTTTATTTTTAATTTAATTTAATTTTTTAATAATTAACAAATCCGATTCCCCCTGTCTCCATGCCCCCTCTTATAACTCACGCTCCTCGTCTCCTTCACCTTCCTTCCTCCCCATTTCTCTCTCCTCTGAAAATTTTCTCGGGAAAATTCTCCCAACCACAACCTTCTCTCTTCTTACACTTCTCTTCCTTCAGGTATAATTTCTCTCCATGGTTTTTTTTTTCTTCTTCTTCTTCTTTGACTCTGTTTCTCGTTGATTCTAACTTCCATGGTCTTCCACCTCAAACTTTGAATTTTCAGATCTATGAACAACACAATCATTTCCCAGTTTTGTAAGCTTTCTCATGAATCAGCTTTTTAAAAAACCCTAATTTCTGGTGAAGAAATTACTTGCTAGATCTATCGGTTTTTTTTCCTCTGTTTGTTTACAAGATGTGAAGTTGAACTGCTTGGCATCGATCTCAGCTGTAAATTGATTTGTTTGACCAGATCTTGTTCTTCCTCTGTTTGTTATCCTTCTGCAAGTTTCTCAGATTTTTTTTTTAAATTATAAAAAAAAACCCATCTTCAAAACTTGGGTCTTTTTTTTCTTTTTCTCTTACATCTAAACAGGGTTATTGTTTTGTCCGTACTTACAGAGAGAAAATTTTTAGAAGAAAATGAACCAGGTGGCAGTTCAACAGAACGCGTTTTCAGTTCATGAAGAGATGCTGAGCGCCGTCGCTGCTGACCGCCGTGAACGAGTGGTTTGCCCAAAACCCCGCCGTCTCGGACTCATTAACTCCACCGTCAACGACAACCCATTTAGACACCGTTTTGATTCCATAGCTGCCAGCGATGCTTTGGATCTTCTCTTCTTTAAGGGTGGTTGTGGATTAGAGAATCTTAACAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTTTTTATGTGGGTCGCCGCCGAGCAGAGTAGCTAACCCATTAATTCAAGACGCTCGATTTGGGGACGAGAAGCCCAAGCTTCTCCCCCTCTTCTCGCCGGCGGCGGCGGCGGCTCCTCCTCCGTCGTCGCCGCCACCATCGGCCGGTCGGAAAGGCGGCTGTGTTCGGTCAAACTTCGGTAACAACCCGGCGGTTAGAATCGAGGGGTTCGATTGCCGTTTGGACAGGGAGAGGCAAAACCGCAGCATCCCTGCGCTGGCTTAAAAACCGAACCGATCCAGCCCTAGCCGAGCCGAGCCGAGCCGAGCCGAGCCGATTCAATGATGATGATGAAGAAAAAAACACATGAGTTTTTATTATTTTTTTCCACAAATTCAAAATTTAAAATTTAAAGTGAAATTTTGAAAAAAGAACCTTTTTGACCAAAACATCCATTATTGTAAATAATGTGAAAAGGAAATCAAAGTAAATATTATGTGAAGGAAAAGGGGGCCTTGTTAGGTATCTTTCTATTTAGTAGAGTTGAGGCTTTGAGAGAGAGTCCTTGTGTTGACCAAAGGAAAATAAAAGAGAGAGATTATTCTTAGGATTTTGTGAATTGAGAGAAAGAATTTGTCTCTCTTTTTCTCTACTCTATTTTGTAATATAAGCTTTTTTTTTTCTTTTTTCCCTTTAGGAGTGTCTAAGGTTGTTTGTTTAATTTAAGGGAAATTTTTTTTTGCAGCTTGTGAATGAGAAAACATGTACAAATTGAAGCTGCAAATTCAGTATCAATGACAAGTATTCCAATGTGAATTTTTCCA ATGAACCAGGTGGCAGTTCAACAGAACGCGTTTTCAGTTCATGAAGAGATGCTGAGCGCCGTCGCTGCTGACCGCCGTGAACGAGTGGTTTGCCCAAAACCCCGCCGTCTCGGACTCATTAACTCCACCGTCAACGACAACCCATTTAGACACCGTTTTGATTCCATAGCTGCCAGCGATGCTTTGGATCTTCTCTTCTTTAAGGGTGGTTGTGGATTAGAGAATCTTAACAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTTTTTATGTGGGTCGCCGCCGAGCAGAGTAGCTAACCCATTAATTCAAGACGCTCGATTTGGGGACGAGAAGCCCAAGCTTCTCCCCCTCTTCTCGCCGGCGGCGGCGGCGGCTCCTCCTCCGTCGTCGCCGCCACCATCGGCCGGTCGGAAAGGCGGCTGTGTTCGGTCAAACTTCGGTAACAACCCGGCGGTTAGAATCGAGGGGTTCGATTGCCGTTTGGACAGGGAGAGGCAAAACCGCAGCATCCCTGCGCTGGCTTAA MNQVAVQQNAFSVHEEMLSAVAADRRERVVCPKPRRLGLINSTVNDNPFRHRFDSIAASDALDLLFFKGGCGLENLNSSSTQLASSPPFLCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAAAAAPPPSSPPPSAGRKGGCVRSNFGNNPAVRIEGFDCRLDRERQNRSIPALA Homology
BLAST of Tan0018106 vs. NCBI nr
Match: XP_022923501.1 (uncharacterized protein LOC111431174 [Cucurbita moschata]) HSP 1 Score: 289.7 bits (740), Expect = 1.7e-74 Identity = 144/175 (82.29%), Postives = 155/175 (88.57%), Query Frame = 0
BLAST of Tan0018106 vs. NCBI nr
Match: KAG7032498.1 (hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 288.5 bits (737), Expect = 3.9e-74 Identity = 143/175 (81.71%), Postives = 155/175 (88.57%), Query Frame = 0
BLAST of Tan0018106 vs. NCBI nr
Match: XP_022971782.1 (uncharacterized protein LOC111470460 [Cucurbita maxima]) HSP 1 Score: 287.3 bits (734), Expect = 8.6e-74 Identity = 143/175 (81.71%), Postives = 154/175 (88.00%), Query Frame = 0
BLAST of Tan0018106 vs. NCBI nr
Match: KAG6601783.1 (hypothetical protein SDJN03_07016, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 286.2 bits (731), Expect = 1.9e-73 Identity = 142/175 (81.14%), Postives = 154/175 (88.00%), Query Frame = 0
BLAST of Tan0018106 vs. NCBI nr
Match: XP_023538993.1 (uncharacterized protein LOC111799757 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 285.8 bits (730), Expect = 2.5e-73 Identity = 142/175 (81.14%), Postives = 154/175 (88.00%), Query Frame = 0
BLAST of Tan0018106 vs. ExPASy TrEMBL
Match: A0A6J1E6Z2 (uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC111431174 PE=4 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 8.4e-75 Identity = 144/175 (82.29%), Postives = 155/175 (88.57%), Query Frame = 0
BLAST of Tan0018106 vs. ExPASy TrEMBL
Match: A0A6J1I2X1 (uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460 PE=4 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 4.2e-74 Identity = 143/175 (81.71%), Postives = 154/175 (88.00%), Query Frame = 0
BLAST of Tan0018106 vs. ExPASy TrEMBL
Match: A0A0A0KRF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 3.4e-68 Identity = 137/163 (84.05%), Postives = 143/163 (87.73%), Query Frame = 0
BLAST of Tan0018106 vs. ExPASy TrEMBL
Match: A0A1S3CR46 (uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 4.9e-67 Identity = 136/163 (83.44%), Postives = 142/163 (87.12%), Query Frame = 0
BLAST of Tan0018106 vs. ExPASy TrEMBL
Match: A0A5D3C147 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00810 PE=4 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 3.2e-66 Identity = 130/158 (82.28%), Postives = 138/158 (87.34%), Query Frame = 0
BLAST of Tan0018106 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 147.1 bits (370), Expect = 1.3e-35 Identity = 96/188 (51.06%), Postives = 121/188 (64.36%), Query Frame = 0
BLAST of Tan0018106 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 129.4 bits (324), Expect = 2.8e-30 Identity = 88/187 (47.06%), Postives = 107/187 (57.22%), Query Frame = 0
BLAST of Tan0018106 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 116.3 bits (290), Expect = 2.5e-26 Identity = 76/183 (41.53%), Postives = 105/183 (57.38%), Query Frame = 0
BLAST of Tan0018106 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 116.3 bits (290), Expect = 2.5e-26 Identity = 76/183 (41.53%), Postives = 105/183 (57.38%), Query Frame = 0
BLAST of Tan0018106 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 112.8 bits (281), Expect = 2.7e-25 Identity = 85/185 (45.95%), Postives = 99/185 (53.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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