Tan0018083 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGCTCTGCCGGAAAAGCACCGTCCATCCATCGACACCGATCATCTCCGATTTCCTTTCGTTTCTTCCGACCGCCATATTTGCTCTCACGGTGGCGCTATCCGCCGACGACAAAGAAGTCCTCGCCTACCTCATCTCCTGTTCCAATACTAGCGCTTCTCTCTCCAACTTCTCCGGCAGCCGAAAAACCGGTCGGAAACTCCCCGGCGGGAAGGGCGGTGTGGATCACGCTCCACTCTTTGACTGCGATTGTTTCATGTGCTATCGGCGATACTGGGCGAGATGGGACTCGTCGCCCAATCGGCAACTTATTCATGAAATAATCGAAGGTTACGAAGACGGATTGGCGAAATCCAAAGCCACAGCAACGACGCAGAGGAATTCCAAGAAAGACAAACGGAAGAAGAATAACGAATCAGCTCCCGGTGAATCGAGCCTCGGGAAGGGCAAGACGAACGAGGTATCGGATTCTCTGCAGCAAGAGGCCGGCGGCGAGAGAAATAGAAAAAACGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGATCAGTTAGAAGGTTCGTGAGTTTTGTAGGCGAGAAAATTTGGAGTGCTTGGGGCTGATCAATTCGAATCGCAAAGGTAGATTTCTTCTTCATTTAATCATCTAACAAGATGAGAAAATAGGGTTTCTGTTTTGAATTTTGAATTTGTTTGCTCTGCTCCCTCTGTAAATTACTTCCCTTATGTAAAAATGATTATATGAAATTCCAGTGAGTTAATCTTCAAGATAAATTTCGTTATTGAAGATTGAAAAAAATAATAATAATAATTTGAAAATAGAAAGAATGGAATGCAAGAGAGTTGCAAAACGTGCATGCATGGCGTTTGCAAATGAATTGATAGTGCTTTGGGGATTTTGGATAGTTGTAAAGATTTTTGGTGGCTGTCCATCACCAACAACAAACTAATTCCGAATCAGGTGGGTTTTCCAAATTAAATAATCCAAATTAAAATTTTTATTTTGGAATTTGGGTAAGTTTCGTTTATGTATTTTTAAATAATTTCTAATGCTAATTAAGGACATGAAGGGTTAAATTAAAATGTAGGGATTAAATTTGACTTAAAAAATCTATGTAAAAAGTGATCTTTCATTCAGAAGGAAGGTTTTTAACTCTCTGGGTAAAGAAGAATATGGTTTTGAAAAGGAAAGATCAGAAGAAAGTGGATATGATCCTCTTCATGATTCTACACACTTGCTCTTCTTAATTAATATTTCTTTTTTCTTACAAATAGACAAAAAAGAGTCCTACAAAAGTTTGAGATAAAAAGAGTTGGATTAATCAGAAAAATGGTTTTTTTTTTTTAGTGCATTAAAAAGTGTGTAAAGAAGAGGAAAGAAGTGGATGATGGGCATGTGTTGCAATTCATGAAGGTTGTAAGCTAAAAGAGAAGCCAAAAAGGGGCAAATTAAAGTTGCCATTGAGGACCTAAAAATCTAAAGTTTTTTTTTTCAGGAGGGCCCTCCCAATTTGTGGCCTTTTAGGCAATGCTTATTTGTAATTTAACCATCTCTGTATGTTTTCTTTTTAAGTCCCTAGTACAAGTTTAATTACTAT ATGAAGAAGCTCTGCCGGAAAAGCACCGTCCATCCATCGACACCGATCATCTCCGATTTCCTTTCGTTTCTTCCGACCGCCATATTTGCTCTCACGGTGGCGCTATCCGCCGACGACAAAGAAGTCCTCGCCTACCTCATCTCCTGTTCCAATACTAGCGCTTCTCTCTCCAACTTCTCCGGCAGCCGAAAAACCGGTCGGAAACTCCCCGGCGGGAAGGGCGGTGTGGATCACGCTCCACTCTTTGACTGCGATTGTTTCATGTGCTATCGGCGATACTGGGCGAGATGGGACTCGTCGCCCAATCGGCAACTTATTCATGAAATAATCGAAGGTTACGAAGACGGATTGGCGAAATCCAAAGCCACAGCAACGACGCAGAGGAATTCCAAGAAAGACAAACGGAAGAAGAATAACGAATCAGCTCCCGGTGAATCGAGCCTCGGGAAGGGCAAGACGAACGAGGTATCGGATTCTCTAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGATCAGTTAGAAGGTTCGTGAGTTTTGTAGGCGAGAAAATTTGGAGTGCTTGGGGCTGATCAATTCGAATCGCAAAGTGCATTAAAAAGTGTGTAAAGAAGAGGAAAGAAGTGGATGATGGGCATGTGTTGCAATTCATGAAGGTTGTAAGCTAAAAGAGAAGCCAAAAAGGGGCAAATTAAAGTTGCCATTGAGGACCTAAAAATCTAAAGTTTTTTTTTTCAGGAGGGCCCTCCCAATTTGTGGCCTTTTAGGCAATGCTTATTTGTAATTTAACCATCTCTGTATGTTTTCTTTTTAAGTCCCTAGTACAAGTTTAATTACTAT ATGAAGAAGCTCTGCCGGAAAAGCACCGTCCATCCATCGACACCGATCATCTCCGATTTCCTTTCGTTTCTTCCGACCGCCATATTTGCTCTCACGGTGGCGCTATCCGCCGACGACAAAGAAGTCCTCGCCTACCTCATCTCCTGTTCCAATACTAGCGCTTCTCTCTCCAACTTCTCCGGCAGCCGAAAAACCGGTCGGAAACTCCCCGGCGGGAAGGGCGGTGTGGATCACGCTCCACTCTTTGACTGCGATTGTTTCATGTGCTATCGGCGATACTGGGCGAGATGGGACTCGTCGCCCAATCGGCAACTTATTCATGAAATAATCGAAGGTTACGAAGACGGATTGGCGAAATCCAAAGCCACAGCAACGACGCAGAGGAATTCCAAGAAAGACAAACGGAAGAAGAATAACGAATCAGCTCCCGGTGAATCGAGCCTCGGGAAGGGCAAGACGAACGAGGTATCGGATTCTCTAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGATCAGTTAGAAGGTTCGTGAGTTTTGTAGGCGAGAAAATTTGGAGTGCTTGGGGCTGA MKKLCRKSTVHPSTPIISDFLSFLPTAIFALTVALSADDKEVLAYLISCSNTSASLSNFSGSRKTGRKLPGGKGGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIEGYEDGLAKSKATATTQRNSKKDKRKKNNESAPGESSLGKGKTNEVSDSLRRRRRRRRRRRRGSVRRFVSFVGEKIWSAWG Homology
BLAST of Tan0018083 vs. NCBI nr
Match: XP_038882712.1 (uncharacterized protein LOC120073876 [Benincasa hispida]) HSP 1 Score: 303.5 bits (776), Expect = 1.3e-78 Identity = 160/203 (78.82%), Postives = 172/203 (84.73%), Query Frame = 0
BLAST of Tan0018083 vs. NCBI nr
Match: TYK13010.1 (uncharacterized protein E5676_scaffold255G006090 [Cucumis melo var. makuwa]) HSP 1 Score: 295.8 bits (756), Expect = 2.6e-76 Identity = 156/203 (76.85%), Postives = 168/203 (82.76%), Query Frame = 0
BLAST of Tan0018083 vs. NCBI nr
Match: KAG7033980.1 (hypothetical protein SDJN02_03706, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 295.4 bits (755), Expect = 3.5e-76 Identity = 155/197 (78.68%), Postives = 164/197 (83.25%), Query Frame = 0
BLAST of Tan0018083 vs. NCBI nr
Match: XP_008440055.1 (PREDICTED: uncharacterized protein LOC103484646 [Cucumis melo]) HSP 1 Score: 295.4 bits (755), Expect = 3.5e-76 Identity = 156/203 (76.85%), Postives = 168/203 (82.76%), Query Frame = 0
BLAST of Tan0018083 vs. NCBI nr
Match: XP_004134788.1 (uncharacterized protein LOC101204826 [Cucumis sativus]) HSP 1 Score: 292.7 bits (748), Expect = 2.2e-75 Identity = 155/203 (76.35%), Postives = 167/203 (82.27%), Query Frame = 0
BLAST of Tan0018083 vs. ExPASy TrEMBL
Match: A0A5D3CNJ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006090 PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 1.3e-76 Identity = 156/203 (76.85%), Postives = 168/203 (82.76%), Query Frame = 0
BLAST of Tan0018083 vs. ExPASy TrEMBL
Match: A0A1S3B0U5 (uncharacterized protein LOC103484646 OS=Cucumis melo OX=3656 GN=LOC103484646 PE=4 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 1.7e-76 Identity = 156/203 (76.85%), Postives = 168/203 (82.76%), Query Frame = 0
BLAST of Tan0018083 vs. ExPASy TrEMBL
Match: A0A0A0KMY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511820 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 1.1e-75 Identity = 155/203 (76.35%), Postives = 167/203 (82.27%), Query Frame = 0
BLAST of Tan0018083 vs. ExPASy TrEMBL
Match: A0A6J1IPN3 (uncharacterized protein LOC111478801 OS=Cucurbita maxima OX=3661 GN=LOC111478801 PE=4 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 5.0e-73 Identity = 149/197 (75.63%), Postives = 160/197 (81.22%), Query Frame = 0
BLAST of Tan0018083 vs. ExPASy TrEMBL
Match: A0A6J1EKS6 (uncharacterized protein LOC111433506 OS=Cucurbita moschata OX=3662 GN=LOC111433506 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 7.5e-69 Identity = 144/203 (70.94%), Postives = 158/203 (77.83%), Query Frame = 0
BLAST of Tan0018083 vs. TAIR 10
Match: AT1G62422.1 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 135.2 bits (339), Expect = 5.6e-32 Identity = 87/206 (42.23%), Postives = 114/206 (55.34%), Query Frame = 0
BLAST of Tan0018083 vs. TAIR 10
Match: AT1G12020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits to 88 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 127.1 bits (318), Expect = 1.5e-29 Identity = 90/229 (39.30%), Postives = 117/229 (51.09%), Query Frame = 0
BLAST of Tan0018083 vs. TAIR 10
Match: AT5G13090.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 98.6 bits (244), Expect = 5.8e-21 Identity = 57/129 (44.19%), Postives = 78/129 (60.47%), Query Frame = 0
BLAST of Tan0018083 vs. TAIR 10
Match: AT1G24270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13090.1); Has 84 Blast hits to 83 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 94.7 bits (234), Expect = 8.3e-20 Identity = 63/158 (39.87%), Postives = 90/158 (56.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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