Tan0018079 (gene) Snake gourd v1

Overview


Name	Tan0018079
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG04: 57868129 .. 57869020 (-)
RNA-Seq Expression	Tan0018079
Synteny	Tan0018079

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCACTCCGATGAAAACTCACAGCTGTCGAACGAAGGGCTCTCCGATAGGTGAGGCGTCGGAAACCCTCATGCAACTATCCAATCTACCCCTAGGGCTATGCCACAAAGTTAGGAGAAGGAGGAACCCATGGAGAAAGATCTCTTGTATCTCAAGTCGGGTTCAGAAGAATGGAAGGAGCAATTGCAGAAATGACCGTTGGGAGTACGAGATGAGGATGGAGAAACCTCTAAAGGTGCAACATTCAGTTTGAAACAAGGGGAAGGGTCCTCAGTGCTTAAAGAACAAAAAAGGGGCACACAGGCATGGCGGGACTGGATAAAACAAAAGCACAAGGAAAGAAGAGTTTGCTCGATTGAAAGAAAGCTTCTAGGGAAGAGCTACGAATCAGAGGAAGAGGAAGTCAAGGCAATGGGAGAAAAGCCCAAACGGCTCTACCGAGCGTCAAACAACCCGAGGAGGTACTTGAAAATGTTGTAGGTAAAAAGGAAGATGAGTCGAAGGGTCCCAAGCCGTATGCCATATCCAAATCGGAAAGGAAGAAATTCCTTGCCTAAAAGAGTGTAATCCCAGTACACAGGGTAAGCGACAGGAAGAAGAAGATGCCGAAGGAAAAGAAGAAGGTTGAATCGAAGGCATCTAGCCCTGATGAATGGGCACAACAAGCCCTAACTCAAGCCCAAAATTTGGCAGCAAAATTCCATGAGGAGCATTTGGCTGGAGGAGGAAGTACAAAAAGACCCAGTCGATGGGCTCCAACAACTTCTGAACAGCAAAAGGAGGATGAACAAGAAACGAAAGGAACTACCGAACCTCCTTGTGAATCAAAAACTGATTTTAATGATGCAAAAATGGAGCCTAGAGATGCTGAAATCTCTAGCCCCTTATAA

mRNA sequence

ATGAGCACTCCGATGAAAACTCACAGCTGTCGAACGAAGGGCTCTCCGATAGGTGAGGCGTCGGAAACCCTCATGCAACTATCCAATCTACCCCTAGGGCTATGCCACAAAGTTAGGAGAAGGAGGAACCCATGGAGAAAGATCTCTTGTATCTCAAGTCGGGTTCAGAAGAATGGAAGGAGCAATTGCAGAAATGACCGTTGGGAGTACGAGATGAGGATGGAGAAACCTCTAAAGGCATGGCGGGACTGGATAAAACAAAAGCACAAGGAAAGAAGAGTTTGCTCGATTGAAAGAAAGCTTCTAGGGAAGAGCTACGAATCAGAGGAAGAGGAAGTCAAGGCAATGGGAGAAAAGCCCAAACGGCTCTACCGAGCGTCAAACAACCCGAGGAGGGTAAGCGACAGGAAGAAGAAGATGCCGAAGGAAAAGAAGAAGGTTGAATCGAAGGCATCTAGCCCTGATGAATGGGCACAACAAGCCCTAACTCAAGCCCAAAATTTGGCAGCAAAATTCCATGAGGAGCATTTGGCTGGAGGAGGAAGTACAAAAAGACCCAGTCGATGGGCTCCAACAACTTCTGAACAGCAAAAGGAGGATGAACAAGAAACGAAAGGAACTACCGAACCTCCTTGTGAATCAAAAACTGATTTTAATGATGCAAAAATGGAGCCTAGAGATGCTGAAATCTCTAGCCCCTTATAA

Coding sequence (CDS)

ATGAGCACTCCGATGAAAACTCACAGCTGTCGAACGAAGGGCTCTCCGATAGGTGAGGCGTCGGAAACCCTCATGCAACTATCCAATCTACCCCTAGGGCTATGCCACAAAGTTAGGAGAAGGAGGAACCCATGGAGAAAGATCTCTTGTATCTCAAGTCGGGTTCAGAAGAATGGAAGGAGCAATTGCAGAAATGACCGTTGGGAGTACGAGATGAGGATGGAGAAACCTCTAAAGGCATGGCGGGACTGGATAAAACAAAAGCACAAGGAAAGAAGAGTTTGCTCGATTGAAAGAAAGCTTCTAGGGAAGAGCTACGAATCAGAGGAAGAGGAAGTCAAGGCAATGGGAGAAAAGCCCAAACGGCTCTACCGAGCGTCAAACAACCCGAGGAGGGTAAGCGACAGGAAGAAGAAGATGCCGAAGGAAAAGAAGAAGGTTGAATCGAAGGCATCTAGCCCTGATGAATGGGCACAACAAGCCCTAACTCAAGCCCAAAATTTGGCAGCAAAATTCCATGAGGAGCATTTGGCTGGAGGAGGAAGTACAAAAAGACCCAGTCGATGGGCTCCAACAACTTCTGAACAGCAAAAGGAGGATGAACAAGAAACGAAAGGAACTACCGAACCTCCTTGTGAATCAAAAACTGATTTTAATGATGCAAAAATGGAGCCTAGAGATGCTGAAATCTCTAGCCCCTTATAA

Protein sequence

MSTPMKTHSCRTKGSPIGEASETLMQLSNLPLGLCHKVRRRRNPWRKISCISSRVQKNGRSNCRNDRWEYEMRMEKPLKAWRDWIKQKHKERRVCSIERKLLGKSYESEEEEVKAMGEKPKRLYRASNNPRRVSDRKKKMPKEKKKVESKASSPDEWAQQALTQAQNLAAKFHEEHLAGGGSTKRPSRWAPTTSEQQKEDEQETKGTTEPPCESKTDFNDAKMEPRDAEISSPL

Homology

The following BLAST results are available for this feature:

BLAST of Tan0018079 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0018079 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0018079 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0018079 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0018079.1	Tan0018079.1	mRNA