Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAACTCGGTTCCTCGACATTGATTACTTCGCCCCCGAAAACGAATCCTTCCACCGCCTCCCTGTCCCTCACCTCGCTTCGAAGCCACTTTTCACCGTCGCCGACCTCCTCCACTTCGATTTTGTCCCAGAAATCTCTCTCGGAATCGATAGGTTAACGATCGATTCTGCTCTCTCCAAGTTCTTTGACGACGTTCTTCCTCAGAGAATCGATGATGAGAATGATTATCGCAGTGCTGGTGGTCAGTCTTCGAGGTTCCAAGGTTTCACGGAGAGGAATTTCTCTTCGGAAAGTGTTGAAACTCGATTCCTGGAGGTAAAATTTTTGCTCAATCAATGCAATTTTCGATTTCATTTAAGATCTCTAGTTAATGTTCTTCACTGCTTGTGGCTGTGAAAATTTTTTGTTCATGAGAGATTCTACGAAGTTTTTGTTTTATAGCATGGCAAGCTTGATTGAATCGAGCAGAGCACTTGAATTTTTTTGCAATTCTCAAGGTTATCAGAGATAATACTCTTCAGAGGCTATTCTCATTTCTAGTTTAATTACGTAATCATTTTTATGTCAAGCCAGGGCTGTGATCGAACTCAAGAGTTATGTCATTGTGAGGCAAAAAGTTGTAAGAACGTGAAATGATTGCTCATGGATGCTTCTATATTTGCTTTTCATGTAAATCCAATTTGAGATGTTTCGGATGAACTTTTGTGATTGTATATTTCTGTCTTCCAATCTAACTTTTTCACGGAAATGCATCTTCAAAGTGAAATGTAATAATAATAATAATAATAATTTTTAAAAATAACTGCCATAAAAGATTCCTCATGCTAGGGAACCACAACCACTTAGAGCATTTCTTAAGATGGAGAGAGCAAAGGAAAAATTTGGTGTCTAGGAGAATGACTTCTTCCCTCCACCTGTAGTTGCAGAAGTTAATTTGAATGCAAAATGGCACGCGTGCTGACAAGGAAGTTATAAAATTTAAAATTGCTGTTGGCTGGAGCTTCTCTCTATTAACCAACAAAACAACCTAACCAATGTAACCTATCAATAATTTAACTAGTTGAACTGGGAAAATAACAATATTTTAGTAGTAATAGTGACTTATAGTACTGTTTTATTCTATTTTTTATTTAACACGTGAAAATAATAATATACATAGATGAATTAATTTATCATACTTGTATAACATTTTCTTTTCTTCTTCTTCTTCAATAATAATAATAATAATTTTTATTATATAGATTTCTTAGCAATGCTTTTTATGTACCTTATCTTAGGACAAAAAATTGTCTTCGACATCTAAAAACACTGCTTGTATCCTGAGACACTTTTTTTTAAAAAGATAAGATTGACTGGGATAGTAATTAACGAGTCCTTTAGACAATCTTTAAAATTAGGACAGGATTGGTTTAGAAATAGCAACTCTTGAGGTTCTCATATTGATGTATCCATACTGGCTTCTCAGATTATGGGCACTCTTCAGTGTAGTTTCGTGATTCTCAAAGGTATTGTCTTGGAGGTTCTCGTGATTTCTGCTTTGTTTGGATATATAAACGTTTCTTCGTTGAAGGAAAATGCAGTTAATGATTCAATAGTCAGGTATAGATTAGATTAGGACTAGATAGAGTAATGTCACAGAATACCTGTCATTCTAACTAAAAAAGTAACCTTAATGATTTATTTTTCTACCTGCTATAGGAGAACTAGCTAGAATTAATCTTGACATGTTAATTTTGACACCATTTCTTCTTTTACCTTTTTTTGGCAAGTTTTCAATTGTGTTTCCTTGAATAAAAGTATCACGATTATGCTTTTTAACTCTTCTTCTTGAACTTTTAGATATTTTTCTTCAAAGGATTCTGGTATGTGCCTCCATCACTTTATCAGGATTTCCTCTTTCCTTTATCTGGTTCATTTTTTTTTTTTTTGGATTGCAGGAAGAAGCTAAGGGTACTTACGAAGATAATGTGGAGAAGGGCTGGAAAAATTTTGGATCTGAAACTTCAGAGACTGAATTCATAAAAGTGCAATTCTGGCTTTCTTGAGCTAAATTACTTTGTTGCATTGTTATGGTATAATGAGGATTTGAATATATAAAATATGTTATGGCAGAAGGATATTGGGACTGACATAAGGAATAGAAACCTCGCATATGATATGATCCAATTTGAAACACCTCAGCTTGATGCGTTCTTGGTAGGATGTACGCCTACTGAAAGTGAAGATTTTAGTGCAATTCTGGTATATTCTACTTGACTGATCCTTGGTTAAGTAAATTGTGTTTACTATTTTACTTATTTCTGCAGGAAAATGCCTTCTTGTTTGAAAAGGAGGAGGTACAAATTCTTACGTTAGCACCAGAGGTTGAATTTAATCTTGTAAGTGGAATATCCTTGTAAATAATTTTCTTAATTGATGTGATAAGCTTGACTTTATTTCGTCTTAGTATTCTTAGACACAACAGGAATATTAAAACTTTCAACATTTTTTCACATCTTAGGATTCTGATGGGCAATGGAATAAGCAGTGATGACATCTGGATTAGAAGATATTATTCTAGAACAAGGAAAATGATAAAGTTATTAGAATTGATAGACTATGGAATAAGCAGTTATAGCATCTGGTTTAGAAGGCATTATCGTAGAACAAGGAAGGCGATGAAGTTATCATAATGGATAGACAATGGAATAAGATGTTACAATCTAGTTTAGAAGACATTACTTTAGAATAAAGAAGATGATAAAGTTATTATAATTAGACAGGTGCAAAATGTTCTGCAAGTCTTTGCGCCTTATCTTAAGTGAGGATTTTGCTTATATTTTCCTCATGCTTTTTTTAATGCGGTGTTTAATGTTTCTAGTTATAGGTAAACATGACGATAATCTGGGTATTTCTTACAGGAGACTCTTAATCAAGGGCTTCTTAAATACCCTTCCAAGGTCAAAGAATCAGTTTATGCTGTTGAACACATTACCTCAGAATATCTCTTGGACCAAGGATCTTGCTTGTTTGAAGACGATGCTCAGGACCAGAAGCTATTGCATCGATTGACTTTTCCCTTTTTAGAAGTAGATGCGATGGTTCTTGAAACTTCAGCATTCTTTTCCTTGCAGGATGAACTTTTTTTTATTCTTGAAAATACTGAACCACCTCATAGGATACAAGATGATAATTTACTTGTCAATAATGAAGAATATTTGTGCTCCATGAAGTGTGATGTTGAAGAATTTCTTTCAGATCATTTTTTGAGACCATGTGCTCTTTCTGAGTTGGCATCCCCCGACATTTCTGGAGGATCAGACTTAATGAGCATGATAGAAACTTTGGAGATTCCAGTAAACTCTACAAAATCAAGTTGCGATTTGCCTGTAGGACCAGTTATTTTTGAAGAATTCCAGCTGCTGGACATATACATGAATCAACTTTTTGAAGTCTTCTTTGATTTGGAATTATCAGCCGCGTCAGAAATTAGTGAATGTATGTCCATTGAAAACACGAATTTCAAGAGTTTCAATGAATTGATTGTTTGTCATGAACTTGCCCTTGTAGATGACACGTTCAAGTCATTACCTGTGCCTATCCTATCTAGTCAGGGATCTGAAAGACCACTGTATGCCTTCATAGAGGATGTGTTAGCTAACCTAAATGGACAATCATTATCTGCTTCCGATGGCATATATTTGGACTGGCATCTATTGGAGGAAAATAGCTGCAGCTCTGGAGTTTATTCTTCGTATCAGAATATGTTGGAAGAAATTAATTTGAAACCCGTAGAATTTGATCAGGAACCTTGTGAAAATGATAGTATATTTTATAGATATGTTTTCTCAGATGATGCTTTAGTCAGAGAAAGAACAGAAGACAAGGGTGAATTAAGGGAGTCTTTTCCTGATGGTATTTCAATGCTTCCTAGTCAAACTATTGACGTCGCTTCAAGCAAATTATTGAATGACAGATGTCAACAAAAAGGAAGGCAGGATCTTGCAGCTGTTGGAATTACTGAGAAGGCTTTATCGTCATGGAAATCAAAATCAGAGTCCAATGATCTCAACTTTTTCTTGAATTCTCAAAAACCTGCTGGTGCGAGAAAGGGTGAATTTTTATTTAGTGCAACCGACACCAATACTATGCTCCCCAAGGTTCCATGTGATGGACAATTGACCAGCCATCCTTCTATGTACAGTGCTGATGTTAGTCTGAAGCAATTGAATGTTGCATTACATCAAGTTTGTCTGTCTGATAACATTCTACATCTCATCAACAACTCTGAGAAAACTTATCTAGCTATCTTGCAGAATGAGATAGAGCTTAGGAAGACATATCTTCCATATGTAGCTGAAGATTATTTTTTAATGCTCAGCCTTCCAAAACAGAAGTTGATAGATTGTATTAAAAAAATATATTTGCAGGGAGCCAGTAATTACTGGGAAGAAAAAATAATGACATTAGCCTTGTTATATGCCACTAAACAGATAGCTTGGTATTTGTGTTTCTATGGTATCTACCCAGCTCATCTATATTTAAAGAAGTTATGTCAGAGCTTGGATTGCTTAAAATCGAGGTTGGGTTTCTTGGTGTCCTTGATTGAGGATGCACGTAGAATGGTTGACAGAGAAATTACCATATCACATCCGGCACTTACTACTATCCAGGATATCTTATGCTCAAAGACCTCTACTAGTACTCTCAAAGTTCTGGTTGTAGCAAACGAAATTTTCTGGTGGTCATTGAAAAAATTGTTTGGGTCCATGGGACTATCTTTTGAAGAGCTAAATTATGAGGGTCCTACAGATCAGCAAGTATCTAACGCAAACATTATGGTGGATGACCTTGCTTCCAATTGCTTATTGGTATCCCAAGAGTAAGTTCCAGCTTTACTAAGTAAACATTTCACAAGCTCCATGTTGTAGGCACATGTTTTATATGCTTAACGTTAACGAAGCTGGCAACTAACATGTAATGAACAATGAGGGAGGTTGGCATGGATAATTAAACAGTCATTCCTTCATTATCAGTTGATGACTTTCAGTGCAGGTTATATCAGCAACAGATGAACCCATGTTCTGAGTTTCATGAGATTTTAACTTTAATTTTTGCAATTATGATTTGTTTTCTAGTTCATTATAGATTTATTTTCCCAAGCTACTATTTAATTTGTTATTCAATGTTGGTCGAACAAACGAATTACAGCCATAAATAGGGAATATTCGATGTGGAATATCATTAATTTGCATGTTGGTAATATATGACATGCAACATTTAGATGAAAAAGGACTTGGGAAAAAACTCTAGGAAACCATACACCCCCATTTCACCCCCCACACACACAAAAAAAAAAAAATCTTCATCGAAATAATTTTTCTTTAGAGAATATTTTGCATCCAGGGCAAGAACAAGATATAGTGTTATATATTTTAATTTAAAACTAATTTTATCCATTAATTTTTAATTGATGAGAAGAATACCTTCCTCGTTAGATTAAATTTGACTTGTACATGCCTATTGGAGTGCTTTTTATTATTTAATTTTTTTTCATTTGATAGGGGTTTTCCCCCTTAAACCTAGTCTCATAGCTGTCCTAATTTTTTTCAAAAATATGTTTGTAAACTTTTGTTCTTCCTTCGTTATTAAAAAGCAACTAGCCAATGCTCAAAAAGAGAGTGAAATTCAAGTGTGTGAGTTTTTTTTTTTTTTTAACAATTGTGAGTTGTAACATGGAGTTCCATGCTTCTTGTATGGTTAAAATTTTAGTGTATGAGATAATTTTTTTTTAACAGTTGTGAATTTTGACATGGAGTTTCATGCTTCTTTTATGGTTAAAATTGAAATTGAAATTGTGGTTTTTGTTATTGCTTTGTATTCTCAATTATTATTATGGCACATTCTGAATTCAATAATGTGTTTTGAAGAACTAAAAACGTTTGTTCTTCCCCAATTTCAAGGCACATATCTGAGAGTTTTCCATTCAACAAATTTAGCACTATCTTGGAATATGGAGGTCTCAATGGTTCTTCTCAGATCTCCACTTACTTTTCAAAATTAATCAACATGCCTCATCTACACTTTGTAATGTTGGAGCTGGATAAGTATGGCAATTGCAAAGCATTTTGTGAAGGTGTTGATTTGCCTCAACATAATGAACTGACAATTGTAAGTTTGTTCCCTTTTGCCTGCAAGTTTGCTGATAATAATATCTATTGCTATTAAGTAAAGCCAATGATTAGGATTACAAGCTTTTATTGAATCCATAAAAGTGTTTGAACTTATCTATCCATAAATTTACATGTCAATGATATCCATATCTATTCTTAGGAAGAGAATTCTTTGGTGGAGAATCAGACCAGGATGTTGGAGAAATTGTTGAACTTTTTACCTGTTGATGATAAGTATATATTGGCATCTCCAGAGGCAACAATTGAAGCGGAGGATTGCAAAGTGCCTCTGCAAGTGCCAGTAGTACCAGATAAATCTCCACACATTGACTTTCTGTCCTTTCCTGAAGCAATTGTTATTGTGAACACTCAGAAATTTGAAAAGGAAATGATTGTATCTAGAAGAAGTTCCTATCAAAGAATTCTTGCATTAGAGAAAGAAGGTGTGCAGGTTGTGGAACGAGATCTGAGTTTGCCCGTGGATTTAATAATTACTCCTGGAATTTGCTTAATGTGGTATGACTGCACAAGCATTCACATGAAAGCCAGTACTCCAAAGGAAGCTTCTTCGGGCTTGAATTTATGCATAGAGAATATTGCAACAGATGTTTTGACATCCCTAAGTTTTGCTTTTAGTGGTTGCGTTCTGGTAATTTTTCTACCCTATGAAGACTATGTATTATTCTTATTAAGTATGAATAGTCTATCTCCCATACCTTCGTTTCTACCCTTTTTGACTCCCTCCCTATGCATTTGATATCATTGTCATAATTTTAAAACTGAACTACTTGAGCATACCCTTGTGCTCTTCTTGAAGATGTCAAGAGTTATCTTTAATTTCTATTGAAGGTTATAGACTGGATCTATCTGGCATGCCAACCTAAGAAGCACGGATATTTTAGTTTGGCTAGCGTGTTCGTGTTCGACACTTGGACACTCGGACACTTGTTAGCACAATAGTTGTGCTAGACACTAGTTGTACAAAGTCAATATAGGTCCAATATTTGTTAGACACGTATCGAACACCTGTTAAATATTTAAATAGACATATAATAGTAAATTTTGAGACGAAATACATCAAACTCATATTTTTAAGCATAAAATGCATAGACTTGTGGACTTTGAATTTCCTTCTTGTATAAAAATGATATATAATTTATAAAATTGTATATTTTAATAAATGTGTCCTTATCATGTTTATGTTCATATCCTAGATTTTTTAAAAATGATGTGTCACAGTCTCCATGTTGTGTCGTATATGTGTCTCGTATCCATATCCGTGCTTCTTAGCTGCCAACTACATTTTATAGCTCTGATGATGAACATGAAAAATCATTGTTTTTTAGCATAAGTTAGGAAAGTGCCAGAAAAAGAAAGGTTTGCTAAATTGCGAGGCCAAACCAAACCAGTTAATCAACAGCTTGTTTTCAAGTCTTAGTTAGTGGCATTTCATTAGAATCCAGGGAATTTGATTGAAGCAATATTTTAGATATAAAAGTCTGCATTCTGTGAACTTGTCCATTCCCCCAAAACACATCCTCTGAGCTCTGGTACTTAGTTCGTTTATGAAAAATTGGAGTCCTTAATTTCCTGGAGTTTGCAAACAGGCTTGTGTACTGTTTTTTTTATTATTATTTTCTTGAAGCATACAAGAATTGATTCGTATCCAGTCATTTCTGATATTGCAATCATGAAAGTGATGGCCAAATTTGTGCACAAACGAAAAAGAAAATTTAATCAAGTGATTACAATGCATGCATGATTCTGTCATCGTCACTAGAATCTCGCATTCATTATTAGCTGTACTAACAAGTCCTGCATTTGCTAGCATGGACATGGAACTTCTTTCATCATAGTGCAGGAGTTAATTGGTTAAAAGACCGGAGTAGACTGAAACTTGATTGTTGCTTGTTGTTGGTATATCTAACCAGCAGTGGGTGCATAATATTGGCTACTCCCTCTTTTGATACAAATGGTAGATTTTTCTTCAGGTTTTTGAGGGAGAAATCAGTTCCCTTTCTATCGTAATGGAATCATCAGATGGACTTTATGCTGCAGCAGCAAGTTTAGAAATTGATTTTCAGCTCTTCTGCTCCTATTCATCCGAATTGACAAATGAGATTATCCTGGGCTGCATTGAGAATGTTTCTAAGCCGATGACTGGGCACCTATACCCCAAGATGTCTGAATCAGAAACTCTTGCAGAATCATTTCTTACGAGTTTCCCTTCAATTAATCCTTTGACAGCTCACGGGATACTTTCTTCAGAAAGCTTTCTTGCTGACTTTCTGGAGTGGCCACATGAGAGCAGGCTCCATGCAATTAAAAAATATTGTATTCCTGATGAAAGTGTGGCTCTATTTAGTGCTCTGTGCAAATATGGTGAGCGGGAGGATTCAAAATCCGTGATGACAGACTGCTCCTCTTCGGTATCTTCTGGTCCTGATTCAGAAAAGTGTTACTTTAAGGGTAATTCTGAAAGAAAGAGAAGAAACTTCACTGGTGGAACCCAATGCATTGATAAAAATATGGATTTTTTGAATTCCGACACGCTGAATCCATTCACTGCTGGCACTACAGAAACTTTAGCAGCATCCAAGTTATTTGGTTCTCAAATGTTTGAAGATCCCGAAATCTTTTGTGATCTCAAAGGGTTATCTTCATCTGTGAATCATTTCTTTGATCAAAACCATAACGGAGAGTCTTTTGATGCAACTATAGCGATGGATCCTATCAGTGTAAGTAAGCCATGTGATTCTTGGATCTCCAAAGCTCCTGAAATATCCGATAAGATTAGAAAGCGTTGTTCATCATATGTTCAAAATCAGGGATTATATAAAAAGAAAATAAACAACTTGCATAATATGAATAAGTCCGAGAAGCAGCATGAGGAGCTTATAGGTGAAGTAGTCAACCTGATTGATACCCCTGTATTAAAAGATGACTTTGCAACTATGACTCCTATGAATTTCTTACCTTCGATGCTTGATCATGAAAAAGATTCATCAAGAAAGTCTAAAATTCAAAGAAGATTGTCTTATGGACAAAGCGATAGCCCTCTCTGTGCAGTTGATATTGCTAGCAACTCAAGTTCAGATTGGCAGAGTTCAGGAGGATTGGACAATCATTTTCCAGATCGTAGTTTCAAACCCAGTATTGTGCCTCTTAGGTACAAGGATGGCCACTCAGATGAGGGTTTGATACAAAATTCTGTAAGAGATTCAAAAGTATTATTTTCACTCTCAGAGAAGGGCACATCACATTCTGATGTAACCCCATTGTCCATTGCTCTCCGTTCAAAACATCTGCAAGACAGTTCACCTTGGACCATGGAATTTCTTAACCGAATTAGGGAAAAAAGCAGAAATCGTCAGCATTCTGTTCCACGCGGCTCATCTTCACCTTTTCCTGAGCATTTGGATAATGTAAAAAAAACAGTTAAAAGAAGAAGTCCCTCCATTCTGGAATTTTTTAAGTACCAAGGGGGCAGCACTCTGAGGAAGAAACCGGAACAAAAGAGACAGAAACAATCAATGCAATCATCGAACTCATCCAAGAATTTATTAGTTCCAACTAGTGAACTCTCTTCATGGACGCCTATTGATAAAAGATCAAGACAGGTTTGTATGTGCTTATTTCTCATCTTACATGTTAGACAGTATTCTACACTTTTTAAATTTTTCACTGAAATCAATTTCAGACTTTATCTTTTGCAATTGATGGGAATGGAAGCCAAACTAAGCTGGTCTGGAGCAATGACAATTATGGTTTAGGAAAAAGCTCACAGAAACTTGGTAATAAATGA
mRNA sequence
ATGCGAACTCGGTTCCTCGACATTGATTACTTCGCCCCCGAAAACGAATCCTTCCACCGCCTCCCTGTCCCTCACCTCGCTTCGAAGCCACTTTTCACCGTCGCCGACCTCCTCCACTTCGATTTTGTCCCAGAAATCTCTCTCGGAATCGATAGGTTAACGATCGATTCTGCTCTCTCCAAGTTCTTTGACGACGTTCTTCCTCAGAGAATCGATGATGAGAATGATTATCGCAGTGCTGGTGGTCAGTCTTCGAGGTTCCAAGGTTTCACGGAGAGGAATTTCTCTTCGGAAAGTGTTGAAACTCGATTCCTGGAGGAAGAAGCTAAGGGTACTTACGAAGATAATGTGGAGAAGGGCTGGAAAAATTTTGGATCTGAAACTTCAGAGACTGAATTCATAAAAAAGGATATTGGGACTGACATAAGGAATAGAAACCTCGCATATGATATGATCCAATTTGAAACACCTCAGCTTGATGCGTTCTTGGAAAATGCCTTCTTGTTTGAAAAGGAGGAGGTACAAATTCTTACGTTAGCACCAGAGGTTGAATTTAATCTTGAGACTCTTAATCAAGGGCTTCTTAAATACCCTTCCAAGGTCAAAGAATCAGTTTATGCTGTTGAACACATTACCTCAGAATATCTCTTGGACCAAGGATCTTGCTTGTTTGAAGACGATGCTCAGGACCAGAAGCTATTGCATCGATTGACTTTTCCCTTTTTAGAAGTAGATGCGATGGTTCTTGAAACTTCAGCATTCTTTTCCTTGCAGGATGAACTTTTTTTTATTCTTGAAAATACTGAACCACCTCATAGGATACAAGATGATAATTTACTTGTCAATAATGAAGAATATTTGTGCTCCATGAAGTGTGATGTTGAAGAATTTCTTTCAGATCATTTTTTGAGACCATGTGCTCTTTCTGAGTTGGCATCCCCCGACATTTCTGGAGGATCAGACTTAATGAGCATGATAGAAACTTTGGAGATTCCAGTAAACTCTACAAAATCAAGTTGCGATTTGCCTGTAGGACCAGTTATTTTTGAAGAATTCCAGCTGCTGGACATATACATGAATCAACTTTTTGAAGTCTTCTTTGATTTGGAATTATCAGCCGCGTCAGAAATTAGTGAATGTATGTCCATTGAAAACACGAATTTCAAGAGTTTCAATGAATTGATTGTTTGTCATGAACTTGCCCTTGTAGATGACACGTTCAAGTCATTACCTGTGCCTATCCTATCTAGTCAGGGATCTGAAAGACCACTGTATGCCTTCATAGAGGATGTGTTAGCTAACCTAAATGGACAATCATTATCTGCTTCCGATGGCATATATTTGGACTGGCATCTATTGGAGGAAAATAGCTGCAGCTCTGGAGTTTATTCTTCGTATCAGAATATGTTGGAAGAAATTAATTTGAAACCCGTAGAATTTGATCAGGAACCTTGTGAAAATGATAGTATATTTTATAGATATGTTTTCTCAGATGATGCTTTAGTCAGAGAAAGAACAGAAGACAAGGGTGAATTAAGGGAGTCTTTTCCTGATGGTATTTCAATGCTTCCTAGTCAAACTATTGACGTCGCTTCAAGCAAATTATTGAATGACAGATGTCAACAAAAAGGAAGGCAGGATCTTGCAGCTGTTGGAATTACTGAGAAGGCTTTATCGTCATGGAAATCAAAATCAGAGTCCAATGATCTCAACTTTTTCTTGAATTCTCAAAAACCTGCTGGTGCGAGAAAGGGTGAATTTTTATTTAGTGCAACCGACACCAATACTATGCTCCCCAAGGTTCCATGTGATGGACAATTGACCAGCCATCCTTCTATGTACAGTGCTGATGTTAGTCTGAAGCAATTGAATGTTGCATTACATCAAGTTTGTCTGTCTGATAACATTCTACATCTCATCAACAACTCTGAGAAAACTTATCTAGCTATCTTGCAGAATGAGATAGAGCTTAGGAAGACATATCTTCCATATGTAGCTGAAGATTATTTTTTAATGCTCAGCCTTCCAAAACAGAAGTTGATAGATTGTATTAAAAAAATATATTTGCAGGGAGCCAGTAATTACTGGGAAGAAAAAATAATGACATTAGCCTTGTTATATGCCACTAAACAGATAGCTTGGTATTTGTGTTTCTATGGTATCTACCCAGCTCATCTATATTTAAAGAAGTTATGTCAGAGCTTGGATTGCTTAAAATCGAGGTTGGGTTTCTTGGTGTCCTTGATTGAGGATGCACGTAGAATGGTTGACAGAGAAATTACCATATCACATCCGGCACTTACTACTATCCAGGATATCTTATGCTCAAAGACCTCTACTAGTACTCTCAAAGTTCTGGTTGTAGCAAACGAAATTTTCTGGTGGTCATTGAAAAAATTGTTTGGGTCCATGGGACTATCTTTTGAAGAGCTAAATTATGAGGGTCCTACAGATCAGCAAGTATCTAACGCAAACATTATGGTGGATGACCTTGCTTCCAATTGCTTATTGGTATCCCAAGAGCACATATCTGAGAGTTTTCCATTCAACAAATTTAGCACTATCTTGGAATATGGAGGTCTCAATGGTTCTTCTCAGATCTCCACTTACTTTTCAAAATTAATCAACATGCCTCATCTACACTTTGTAATGTTGGAGCTGGATAAGTATGGCAATTGCAAAGCATTTTGTGAAGGTGTTGATTTGCCTCAACATAATGAACTGACAATTGAAGAGAATTCTTTGGTGGAGAATCAGACCAGGATGTTGGAGAAATTGTTGAACTTTTTACCTGTTGATGATAAGTATATATTGGCATCTCCAGAGGCAACAATTGAAGCGGAGGATTGCAAAGTGCCTCTGCAAGTGCCAGTAGTACCAGATAAATCTCCACACATTGACTTTCTGTCCTTTCCTGAAGCAATTGTTATTGTGAACACTCAGAAATTTGAAAAGGAAATGATTGTATCTAGAAGAAGTTCCTATCAAAGAATTCTTGCATTAGAGAAAGAAGGTGTGCAGGTTGTGGAACGAGATCTGAGTTTGCCCGTGGATTTAATAATTACTCCTGGAATTTGCTTAATGTGGTATGACTGCACAAGCATTCACATGAAAGCCAGTACTCCAAAGGAAGCTTCTTCGGGCTTGAATTTATGCATAGAGAATATTGCAACAGATGTTTTGACATCCCTAAGTTTTGCTTTTAGTGGTTGCGTTCTGGTTTTTGAGGGAGAAATCAGTTCCCTTTCTATCGTAATGGAATCATCAGATGGACTTTATGCTGCAGCAGCAAGTTTAGAAATTGATTTTCAGCTCTTCTGCTCCTATTCATCCGAATTGACAAATGAGATTATCCTGGGCTGCATTGAGAATGTTTCTAAGCCGATGACTGGGCACCTATACCCCAAGATGTCTGAATCAGAAACTCTTGCAGAATCATTTCTTACGAGTTTCCCTTCAATTAATCCTTTGACAGCTCACGGGATACTTTCTTCAGAAAGCTTTCTTGCTGACTTTCTGGAGTGGCCACATGAGAGCAGGCTCCATGCAATTAAAAAATATTGTATTCCTGATGAAAGTGTGGCTCTATTTAGTGCTCTGTGCAAATATGGTGAGCGGGAGGATTCAAAATCCGTGATGACAGACTGCTCCTCTTCGGTATCTTCTGGTCCTGATTCAGAAAAGTGTTACTTTAAGGGTAATTCTGAAAGAAAGAGAAGAAACTTCACTGGTGGAACCCAATGCATTGATAAAAATATGGATTTTTTGAATTCCGACACGCTGAATCCATTCACTGCTGGCACTACAGAAACTTTAGCAGCATCCAAGTTATTTGGTTCTCAAATGTTTGAAGATCCCGAAATCTTTTGTGATCTCAAAGGGTTATCTTCATCTGTGAATCATTTCTTTGATCAAAACCATAACGGAGAGTCTTTTGATGCAACTATAGCGATGGATCCTATCAGTGTAAGTAAGCCATGTGATTCTTGGATCTCCAAAGCTCCTGAAATATCCGATAAGATTAGAAAGCGTTGTTCATCATATGTTCAAAATCAGGGATTATATAAAAAGAAAATAAACAACTTGCATAATATGAATAAGTCCGAGAAGCAGCATGAGGAGCTTATAGGTGAAGTAGTCAACCTGATTGATACCCCTGTATTAAAAGATGACTTTGCAACTATGACTCCTATGAATTTCTTACCTTCGATGCTTGATCATGAAAAAGATTCATCAAGAAAGTCTAAAATTCAAAGAAGATTGTCTTATGGACAAAGCGATAGCCCTCTCTGTGCAGTTGATATTGCTAGCAACTCAAGTTCAGATTGGCAGAGTTCAGGAGGATTGGACAATCATTTTCCAGATCGTAGTTTCAAACCCAGTATTGTGCCTCTTAGGTACAAGGATGGCCACTCAGATGAGGGTTTGATACAAAATTCTGTAAGAGATTCAAAAGTATTATTTTCACTCTCAGAGAAGGGCACATCACATTCTGATGTAACCCCATTGTCCATTGCTCTCCGTTCAAAACATCTGCAAGACAGTTCACCTTGGACCATGGAATTTCTTAACCGAATTAGGGAAAAAAGCAGAAATCGTCAGCATTCTGTTCCACGCGGCTCATCTTCACCTTTTCCTGAGCATTTGGATAATGTAAAAAAAACAGTTAAAAGAAGAAGTCCCTCCATTCTGGAATTTTTTAAGTACCAAGGGGGCAGCACTCTGAGGAAGAAACCGGAACAAAAGAGACAGAAACAATCAATGCAATCATCGAACTCATCCAAGAATTTATTAGTTCCAACTAGTGAACTCTCTTCATGGACGCCTATTGATAAAAGATCAAGACAGACTTTATCTTTTGCAATTGATGGGAATGGAAGCCAAACTAAGCTGGTCTGGAGCAATGACAATTATGGTTTAGGAAAAAGCTCACAGAAACTTGGTAATAAATGA
Coding sequence (CDS)
ATGCGAACTCGGTTCCTCGACATTGATTACTTCGCCCCCGAAAACGAATCCTTCCACCGCCTCCCTGTCCCTCACCTCGCTTCGAAGCCACTTTTCACCGTCGCCGACCTCCTCCACTTCGATTTTGTCCCAGAAATCTCTCTCGGAATCGATAGGTTAACGATCGATTCTGCTCTCTCCAAGTTCTTTGACGACGTTCTTCCTCAGAGAATCGATGATGAGAATGATTATCGCAGTGCTGGTGGTCAGTCTTCGAGGTTCCAAGGTTTCACGGAGAGGAATTTCTCTTCGGAAAGTGTTGAAACTCGATTCCTGGAGGAAGAAGCTAAGGGTACTTACGAAGATAATGTGGAGAAGGGCTGGAAAAATTTTGGATCTGAAACTTCAGAGACTGAATTCATAAAAAAGGATATTGGGACTGACATAAGGAATAGAAACCTCGCATATGATATGATCCAATTTGAAACACCTCAGCTTGATGCGTTCTTGGAAAATGCCTTCTTGTTTGAAAAGGAGGAGGTACAAATTCTTACGTTAGCACCAGAGGTTGAATTTAATCTTGAGACTCTTAATCAAGGGCTTCTTAAATACCCTTCCAAGGTCAAAGAATCAGTTTATGCTGTTGAACACATTACCTCAGAATATCTCTTGGACCAAGGATCTTGCTTGTTTGAAGACGATGCTCAGGACCAGAAGCTATTGCATCGATTGACTTTTCCCTTTTTAGAAGTAGATGCGATGGTTCTTGAAACTTCAGCATTCTTTTCCTTGCAGGATGAACTTTTTTTTATTCTTGAAAATACTGAACCACCTCATAGGATACAAGATGATAATTTACTTGTCAATAATGAAGAATATTTGTGCTCCATGAAGTGTGATGTTGAAGAATTTCTTTCAGATCATTTTTTGAGACCATGTGCTCTTTCTGAGTTGGCATCCCCCGACATTTCTGGAGGATCAGACTTAATGAGCATGATAGAAACTTTGGAGATTCCAGTAAACTCTACAAAATCAAGTTGCGATTTGCCTGTAGGACCAGTTATTTTTGAAGAATTCCAGCTGCTGGACATATACATGAATCAACTTTTTGAAGTCTTCTTTGATTTGGAATTATCAGCCGCGTCAGAAATTAGTGAATGTATGTCCATTGAAAACACGAATTTCAAGAGTTTCAATGAATTGATTGTTTGTCATGAACTTGCCCTTGTAGATGACACGTTCAAGTCATTACCTGTGCCTATCCTATCTAGTCAGGGATCTGAAAGACCACTGTATGCCTTCATAGAGGATGTGTTAGCTAACCTAAATGGACAATCATTATCTGCTTCCGATGGCATATATTTGGACTGGCATCTATTGGAGGAAAATAGCTGCAGCTCTGGAGTTTATTCTTCGTATCAGAATATGTTGGAAGAAATTAATTTGAAACCCGTAGAATTTGATCAGGAACCTTGTGAAAATGATAGTATATTTTATAGATATGTTTTCTCAGATGATGCTTTAGTCAGAGAAAGAACAGAAGACAAGGGTGAATTAAGGGAGTCTTTTCCTGATGGTATTTCAATGCTTCCTAGTCAAACTATTGACGTCGCTTCAAGCAAATTATTGAATGACAGATGTCAACAAAAAGGAAGGCAGGATCTTGCAGCTGTTGGAATTACTGAGAAGGCTTTATCGTCATGGAAATCAAAATCAGAGTCCAATGATCTCAACTTTTTCTTGAATTCTCAAAAACCTGCTGGTGCGAGAAAGGGTGAATTTTTATTTAGTGCAACCGACACCAATACTATGCTCCCCAAGGTTCCATGTGATGGACAATTGACCAGCCATCCTTCTATGTACAGTGCTGATGTTAGTCTGAAGCAATTGAATGTTGCATTACATCAAGTTTGTCTGTCTGATAACATTCTACATCTCATCAACAACTCTGAGAAAACTTATCTAGCTATCTTGCAGAATGAGATAGAGCTTAGGAAGACATATCTTCCATATGTAGCTGAAGATTATTTTTTAATGCTCAGCCTTCCAAAACAGAAGTTGATAGATTGTATTAAAAAAATATATTTGCAGGGAGCCAGTAATTACTGGGAAGAAAAAATAATGACATTAGCCTTGTTATATGCCACTAAACAGATAGCTTGGTATTTGTGTTTCTATGGTATCTACCCAGCTCATCTATATTTAAAGAAGTTATGTCAGAGCTTGGATTGCTTAAAATCGAGGTTGGGTTTCTTGGTGTCCTTGATTGAGGATGCACGTAGAATGGTTGACAGAGAAATTACCATATCACATCCGGCACTTACTACTATCCAGGATATCTTATGCTCAAAGACCTCTACTAGTACTCTCAAAGTTCTGGTTGTAGCAAACGAAATTTTCTGGTGGTCATTGAAAAAATTGTTTGGGTCCATGGGACTATCTTTTGAAGAGCTAAATTATGAGGGTCCTACAGATCAGCAAGTATCTAACGCAAACATTATGGTGGATGACCTTGCTTCCAATTGCTTATTGGTATCCCAAGAGCACATATCTGAGAGTTTTCCATTCAACAAATTTAGCACTATCTTGGAATATGGAGGTCTCAATGGTTCTTCTCAGATCTCCACTTACTTTTCAAAATTAATCAACATGCCTCATCTACACTTTGTAATGTTGGAGCTGGATAAGTATGGCAATTGCAAAGCATTTTGTGAAGGTGTTGATTTGCCTCAACATAATGAACTGACAATTGAAGAGAATTCTTTGGTGGAGAATCAGACCAGGATGTTGGAGAAATTGTTGAACTTTTTACCTGTTGATGATAAGTATATATTGGCATCTCCAGAGGCAACAATTGAAGCGGAGGATTGCAAAGTGCCTCTGCAAGTGCCAGTAGTACCAGATAAATCTCCACACATTGACTTTCTGTCCTTTCCTGAAGCAATTGTTATTGTGAACACTCAGAAATTTGAAAAGGAAATGATTGTATCTAGAAGAAGTTCCTATCAAAGAATTCTTGCATTAGAGAAAGAAGGTGTGCAGGTTGTGGAACGAGATCTGAGTTTGCCCGTGGATTTAATAATTACTCCTGGAATTTGCTTAATGTGGTATGACTGCACAAGCATTCACATGAAAGCCAGTACTCCAAAGGAAGCTTCTTCGGGCTTGAATTTATGCATAGAGAATATTGCAACAGATGTTTTGACATCCCTAAGTTTTGCTTTTAGTGGTTGCGTTCTGGTTTTTGAGGGAGAAATCAGTTCCCTTTCTATCGTAATGGAATCATCAGATGGACTTTATGCTGCAGCAGCAAGTTTAGAAATTGATTTTCAGCTCTTCTGCTCCTATTCATCCGAATTGACAAATGAGATTATCCTGGGCTGCATTGAGAATGTTTCTAAGCCGATGACTGGGCACCTATACCCCAAGATGTCTGAATCAGAAACTCTTGCAGAATCATTTCTTACGAGTTTCCCTTCAATTAATCCTTTGACAGCTCACGGGATACTTTCTTCAGAAAGCTTTCTTGCTGACTTTCTGGAGTGGCCACATGAGAGCAGGCTCCATGCAATTAAAAAATATTGTATTCCTGATGAAAGTGTGGCTCTATTTAGTGCTCTGTGCAAATATGGTGAGCGGGAGGATTCAAAATCCGTGATGACAGACTGCTCCTCTTCGGTATCTTCTGGTCCTGATTCAGAAAAGTGTTACTTTAAGGGTAATTCTGAAAGAAAGAGAAGAAACTTCACTGGTGGAACCCAATGCATTGATAAAAATATGGATTTTTTGAATTCCGACACGCTGAATCCATTCACTGCTGGCACTACAGAAACTTTAGCAGCATCCAAGTTATTTGGTTCTCAAATGTTTGAAGATCCCGAAATCTTTTGTGATCTCAAAGGGTTATCTTCATCTGTGAATCATTTCTTTGATCAAAACCATAACGGAGAGTCTTTTGATGCAACTATAGCGATGGATCCTATCAGTGTAAGTAAGCCATGTGATTCTTGGATCTCCAAAGCTCCTGAAATATCCGATAAGATTAGAAAGCGTTGTTCATCATATGTTCAAAATCAGGGATTATATAAAAAGAAAATAAACAACTTGCATAATATGAATAAGTCCGAGAAGCAGCATGAGGAGCTTATAGGTGAAGTAGTCAACCTGATTGATACCCCTGTATTAAAAGATGACTTTGCAACTATGACTCCTATGAATTTCTTACCTTCGATGCTTGATCATGAAAAAGATTCATCAAGAAAGTCTAAAATTCAAAGAAGATTGTCTTATGGACAAAGCGATAGCCCTCTCTGTGCAGTTGATATTGCTAGCAACTCAAGTTCAGATTGGCAGAGTTCAGGAGGATTGGACAATCATTTTCCAGATCGTAGTTTCAAACCCAGTATTGTGCCTCTTAGGTACAAGGATGGCCACTCAGATGAGGGTTTGATACAAAATTCTGTAAGAGATTCAAAAGTATTATTTTCACTCTCAGAGAAGGGCACATCACATTCTGATGTAACCCCATTGTCCATTGCTCTCCGTTCAAAACATCTGCAAGACAGTTCACCTTGGACCATGGAATTTCTTAACCGAATTAGGGAAAAAAGCAGAAATCGTCAGCATTCTGTTCCACGCGGCTCATCTTCACCTTTTCCTGAGCATTTGGATAATGTAAAAAAAACAGTTAAAAGAAGAAGTCCCTCCATTCTGGAATTTTTTAAGTACCAAGGGGGCAGCACTCTGAGGAAGAAACCGGAACAAAAGAGACAGAAACAATCAATGCAATCATCGAACTCATCCAAGAATTTATTAGTTCCAACTAGTGAACTCTCTTCATGGACGCCTATTGATAAAAGATCAAGACAGACTTTATCTTTTGCAATTGATGGGAATGGAAGCCAAACTAAGCTGGTCTGGAGCAATGACAATTATGGTTTAGGAAAAAGCTCACAGAAACTTGGTAATAAATGA
Protein sequence
MRTRFLDIDYFAPENESFHRLPVPHLASKPLFTVADLLHFDFVPEISLGIDRLTIDSALSKFFDDVLPQRIDDENDYRSAGGQSSRFQGFTERNFSSESVETRFLEEEAKGTYEDNVEKGWKNFGSETSETEFIKKDIGTDIRNRNLAYDMIQFETPQLDAFLENAFLFEKEEVQILTLAPEVEFNLETLNQGLLKYPSKVKESVYAVEHITSEYLLDQGSCLFEDDAQDQKLLHRLTFPFLEVDAMVLETSAFFSLQDELFFILENTEPPHRIQDDNLLVNNEEYLCSMKCDVEEFLSDHFLRPCALSELASPDISGGSDLMSMIETLEIPVNSTKSSCDLPVGPVIFEEFQLLDIYMNQLFEVFFDLELSAASEISECMSIENTNFKSFNELIVCHELALVDDTFKSLPVPILSSQGSERPLYAFIEDVLANLNGQSLSASDGIYLDWHLLEENSCSSGVYSSYQNMLEEINLKPVEFDQEPCENDSIFYRYVFSDDALVRERTEDKGELRESFPDGISMLPSQTIDVASSKLLNDRCQQKGRQDLAAVGITEKALSSWKSKSESNDLNFFLNSQKPAGARKGEFLFSATDTNTMLPKVPCDGQLTSHPSMYSADVSLKQLNVALHQVCLSDNILHLINNSEKTYLAILQNEIELRKTYLPYVAEDYFLMLSLPKQKLIDCIKKIYLQGASNYWEEKIMTLALLYATKQIAWYLCFYGIYPAHLYLKKLCQSLDCLKSRLGFLVSLIEDARRMVDREITISHPALTTIQDILCSKTSTSTLKVLVVANEIFWWSLKKLFGSMGLSFEELNYEGPTDQQVSNANIMVDDLASNCLLVSQEHISESFPFNKFSTILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKYGNCKAFCEGVDLPQHNELTIEENSLVENQTRMLEKLLNFLPVDDKYILASPEATIEAEDCKVPLQVPVVPDKSPHIDFLSFPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDLSLPVDLIITPGICLMWYDCTSIHMKASTPKEASSGLNLCIENIATDVLTSLSFAFSGCVLVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTNEIILGCIENVSKPMTGHLYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLADFLEWPHESRLHAIKKYCIPDESVALFSALCKYGEREDSKSVMTDCSSSVSSGPDSEKCYFKGNSERKRRNFTGGTQCIDKNMDFLNSDTLNPFTAGTTETLAASKLFGSQMFEDPEIFCDLKGLSSSVNHFFDQNHNGESFDATIAMDPISVSKPCDSWISKAPEISDKIRKRCSSYVQNQGLYKKKINNLHNMNKSEKQHEELIGEVVNLIDTPVLKDDFATMTPMNFLPSMLDHEKDSSRKSKIQRRLSYGQSDSPLCAVDIASNSSSDWQSSGGLDNHFPDRSFKPSIVPLRYKDGHSDEGLIQNSVRDSKVLFSLSEKGTSHSDVTPLSIALRSKHLQDSSPWTMEFLNRIREKSRNRQHSVPRGSSSPFPEHLDNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRQKQSMQSSNSSKNLLVPTSELSSWTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKSSQKLGNK
Homology
BLAST of Tan0017993 vs. ExPASy Swiss-Prot
Match:
F4KG50 (Protein SHORTAGE IN CHIASMATA 1 OS=Arabidopsis thaliana OX=3702 GN=SHOC1 PE=1 SV=1)
HSP 1 Score: 808.5 bits (2087), Expect = 1.4e-232
Identity = 615/1702 (36.13%), Postives = 906/1702 (53.23%), Query Frame = 0
Query: 1 MRTRFLDIDYFAP------ENESFHRLPVPHLASKPLF--TVADLLHFDFVPEISLGIDR 60
MRTRFL+IDYF+ E F LP P P+ D L F + +S+ I
Sbjct: 1 MRTRFLNIDYFSTPPSHVFETLGFLNLPAPDNFPAPIVYNGEEDRLRFGSIENVSIPIGN 60
Query: 61 LTIDSALSKFFDDVLPQRIDDENDYRSAGGQSSRFQGFTERNFSSESVETRFLEEEAKGT 120
L I++ALSKF DV+P R+ DYR F+ +++ + G
Sbjct: 61 LPIEAALSKFLSDVVPDRV--SVDYRV-------FE----------------IDDSSLGV 120
Query: 121 YEDNVEKGWKNFGSETSETEFIKKDIGTDIRNRNLAYDMIQFETPQLDAFLENAFLFEKE 180
Y + +KD G I ++ +I+ ETP+LD +EN L E
Sbjct: 121 YYSD------------------EKDDGDAIADK-ATPKIIELETPELDFEMENKLLCTSE 180
Query: 181 E-VQILTLAPEVEFNLETLNQG---LLKYPSKVKESVYAVEHITSEYLLDQGSCLFEDDA 240
+ +Q + E++ N +G +L+ ++E +Y+V++I S+Y + + + E++
Sbjct: 181 DHLQCFSEVLEIK-NDPVKYEGSDIILQNSKDIQEQIYSVDYIPSDYFTENNTSVAENEC 240
Query: 241 --QDQKLLHRLTFPFLEVDAMVLETSAFFSLQDELFFILENTEPPHRIQDDNLLVNNEEY 300
+ Q FP LEVD + L + S+ D++F +LE EP +L++N++E
Sbjct: 241 FRKIQPWFKDARFPLLEVDEVNLSELSSLSVLDKVFTVLETIEPQDTNAGSSLIINSKEL 300
Query: 301 LCSMKCDVEEFLS-DHFLRPCALSELASPDISGGSDLMSMIETLEIPVNSTKSSCDLPVG 360
+ S D+ + LS D +L S++ D D+++++E +++ +
Sbjct: 301 IGSKDYDLLDVLSTDCYLNKSGQSDVVPEDEFSEMDIVTILE-----ISNAEEFQGKVAV 360
Query: 361 PVIFEEFQLLDIYMNQLFEVFFDLELSAASEISECMSIENTNFKSFNELIVCHELALVDD 420
PV +EEFQ+LD+ ++ +F++F L+ + EI M + NFK F+EL+V ELA DD
Sbjct: 361 PVTYEEFQILDVDISDVFDIFLCLQKAIEPEICYGMFSKEMNFKDFDELVVSSELAFTDD 420
Query: 421 TFKSLPVPILSSQGSERPLYAFIEDVLANLNGQSLSASDGIYLDWHLLEENSCSSGVYSS 480
FKSLP PIL R L EDVL+ + QSLSAS+ IYL W+LLEE + + Y
Sbjct: 421 AFKSLPTPILHDYEMTRSLELIYEDVLSKIKPQSLSASNDIYLPWNLLEERNHNHCDYP- 480
Query: 481 YQNMLEEINLKPVEFDQEPCENDSIFYRYVFSDDALVRERTEDKGELRESFPDGISMLPS 540
EEI ++++ E E D Y ++FS+DA E + E F GIS L
Sbjct: 481 ----FEEIVTFNIDYNWEASEGDKWVYDFIFSEDAFCEPLVE---KCTEPF-YGISNLDE 540
Query: 541 QTIDVASSKLLNDRCQQKGRQDLAAVGITEKALSSWKSKSESNDLNFFLNSQKPAGARKG 600
S LL + Q+ G +D A +KA +KS S +DL FF++ +K
Sbjct: 541 HAPVNTSHGLLENPFQKTGARDCAVDDNAKKATLLFKSMSAFDDLTFFMDPKKAVIEDNL 600
Query: 601 EF-LFSATDTNTMLPKVPCDGQLTS---HPSMYSADVSLKQLNVALHQVCLSDNILHLIN 660
E + +A TN + S HP+ K + LH V S+NI L+
Sbjct: 601 ESRVEAAKTTNHKCMSIDSKASCRSGGMHPNP-------KTEEMILHSVRPSENIQALVG 660
Query: 661 NSEKTYLAILQNEIELRKTYLPYVAEDYFLMLSLPKQKLIDCIKKIYLQGASNYWEEKIM 720
K+YL ++++E E ++ED +LS+ K KLIDCI+K + + ++K
Sbjct: 661 EFVKSYLTLVKDESE-------NLSEDKLKLLSISKGKLIDCIRKANVH-KTQLADDKTF 720
Query: 721 TLALLYATKQIAWYLCFYGIYPAHLYLKKLCQSLDCLKSRLGFLVSLIEDARRMVDREIT 780
T ALL A KQ+ WY+CF+GI+ A++YL K+C+S + +K L L S +E + + +IT
Sbjct: 721 TFALLLAIKQMTWYMCFFGIHVAYIYLNKVCRSSNPMKIGLHTLYSAVETEHKSDETDIT 780
Query: 781 ISHPALTTIQDILCSKTSTSTLKVLVVANEIFWWSLKKLFGSMGLSFEELNYEGPTDQQ- 840
SHP+L IQ IL S+ + K L++A ++FW SLK+L SMGLS+ +LN P+ +
Sbjct: 781 RSHPSLAVIQGILQSEFARGNSKALLLAEKVFWSSLKRLLMSMGLSYNDLNSPSPSGNRP 840
Query: 841 -VSNANIMVDDLASNCLLVSQEHISESFPFNKFSTILEYGGLNGSSQISTYFSKLINMPH 900
V A + S+CL++S E IS SFP FS I+EYGG N S + S + SKL + P
Sbjct: 841 NVHEAIELGFLPISDCLIISYEQISPSFPVENFSVIVEYGGPNASPRYS-FPSKLDSFPS 900
Query: 901 LHFVMLELDKYGNCKAFCEGVDLPQHNELTIEENSLVENQTRMLEKLLNFLPVDDKYILA 960
HF+ +ELD C C GV +P L + + VE +T LE++LNF+P++
Sbjct: 901 FHFIKVELDMPSACGQLCAGVTVPY--SLKMIKGDEVETKTGWLEEVLNFVPLEKVCYAG 960
Query: 961 SPEATIEAEDCKVPLQVPVVPDKSPHI--DFLSFPEAIVIVNTQKFEKEMIVSRRSSYQR 1020
S E T E+E +P + ++ I LS ++++VNT+ +KEMI+SRRS+YQ+
Sbjct: 961 SSETTNESEFISMPQE----SERKRGIIEQGLSDQRSVIVVNTKTVDKEMIISRRSTYQK 1020
Query: 1021 ILALEKEGVQVVERDLSLPVDLIITPGICLMWYDCTSIHMKASTPKEASSGLNLCIENIA 1080
+LA+EKEGVQVVERD LPVDL+++P +CL+WYD ++ K++ SS I +IA
Sbjct: 1021 VLAMEKEGVQVVERDSDLPVDLMLSPAVCLLWYDSETVSKKSAATIGTSSSSLSWIGDIA 1080
Query: 1081 TDVLTSLSFAFSGCVLVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTNEI 1140
T+VLTSLSF+FS C++VFEGE + L+ VM+SSD LYAAA SL I Q+FCS S+ LT+EI
Sbjct: 1081 TNVLTSLSFSFSTCIMVFEGEPAFLAAVMDSSDELYAAAGSLGISLQMFCSSSANLTDEI 1140
Query: 1141 ILGCIENVSKPMTGHLYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLADFLEWPH 1200
IL CI++ K L+ KM ESE+LAESFLT FPS+NPLTA ILSS L +F++ PH
Sbjct: 1141 ILKCIKSSVK--LSKLHVKMPESESLAESFLTKFPSVNPLTAQVILSSSGSLLEFMKLPH 1200
Query: 1201 ESRLHAIKKYCIPDESVALFSALCKYGEREDSKSVMTDCSSSVSSGPDSEKCYFKGNSER 1260
+S++ +KY +P+ESV LFS++C+YG REDS+SVMTD SSSVSSGPDS+ + +S
Sbjct: 1201 KSKVERTQKYHVPEESVDLFSSVCRYGAREDSRSVMTDSSSSVSSGPDSDTHHVSVHSGS 1260
Query: 1261 KRRNFTGGTQCIDKNMDFLNSDTLNPFTAGTTETLAASKLFGSQMFEDPEIFCDLKGLSS 1320
K++ + ID + D ++ F ++ +L S +D EIF
Sbjct: 1261 KKKQYIAEKDEIDMD-DLVHFSPSIEFADTQLKSSGDFQLDDSWSSKDHEIF-------- 1320
Query: 1321 SVNHFFDQNHNGESFDATIAMDPISVSKPCDSWISKAPEISDKIRKRCSS---------- 1380
HF + E DA P +S P DSW SK PE DK SS
Sbjct: 1321 ---HF---DPVTEFSDA--PFKPSGISHPNDSWPSKDPERFDKKSGPGSSSKDTFWEKDQ 1380
Query: 1381 --------------------------YVQNQGLYKKKIN--NLHNMNKSEKQHEELIGEV 1440
QN+G + NLH+ SE + GEV
Sbjct: 1381 PDFSVEDSLPGIPELEDWSFPVKDKFMSQNRGCKFPVMRDFNLHDNRNSENFIADYKGEV 1440
Query: 1441 VNLIDTPVLKDDFATMTPMNFLPSMLD--HEKDSSRKSKIQRRLSYGQSDSPLC--AVDI 1500
++ D L++DF N ++ +E++ RKSK R+LS+ S P A DI
Sbjct: 1441 IDRAD-KYLEEDFPPSPGYNRFARIVSDVNEEELPRKSKSSRKLSFFGSLQPNFPKAADI 1500
Query: 1501 ASNSSS-DWQSSGGLDNHFPDRSFKPSIVPLRYKDGHSDEGLIQNSVRDSKVLFSLSEKG 1560
S+S + DN+ R + + R + + +++V +++ F +
Sbjct: 1501 DSSSERYATEKDSKYDNNTSLRGYADNYPAKRQRTLLEEVLTRRSAVPTTELPF---REE 1560
Query: 1561 TSHSDVTPLSIALRSKHLQDSSPWTMEFLNRIREKSRNR--QHSVPRGSSSPFPEHLDNV 1620
SH +PLS A+RS + SSPWT++FLNR+RE+SR R Q S+P +S P E N+
Sbjct: 1561 ISHFGGSPLSNAIRSSNQVQSSPWTVDFLNRVRERSRARKQQQSLPSYASPPSLETPGNI 1593
Query: 1621 KK-TVKRRSPSILEFFKYQGGSTLRKKPEQKRQKQSMQSSNSSKNLLVPTSELSSWTPID 1634
KK KR+SPSILEFFKY+GG+ L+ E+KRQK+S SS S KN S L S TPID
Sbjct: 1621 KKANTKRKSPSILEFFKYKGGNKLQ---EEKRQKRSKNSSASPKNERF-YSPLKSCTPID 1593
BLAST of Tan0017993 vs. ExPASy Swiss-Prot
Match:
B9F1C0 (Protein SHORTAGE IN CHIASMATA 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=SHOC1 PE=1 SV=1)
HSP 1 Score: 519.6 bits (1337), Expect = 1.3e-145
Identity = 526/1816 (28.96%), Postives = 813/1816 (44.77%), Query Frame = 0
Query: 1 MRTRFLDIDYFAPENE------------SFHRLPVPHLASKP---LFTVADLLHFDFVPE 60
MRTRFL DYFAP + SF LPVP L P FT AD L V +
Sbjct: 1 MRTRFLATDYFAPSSSSAAGKALALEFFSFPSLPVPALPPDPHFLPFTSADELPAATVAD 60
Query: 61 ISLGIDRLTIDSALSKFFDDVLPQRID-------DE--NDYRSAGGQSSRFQGFTERNFS 120
LG L I SALS F V+PQ + DE +D+ G G+ E +FS
Sbjct: 61 DGLG--PLPIASALSDFLAAVIPQALPVPTVPAADEVLDDFLYDRG------GYGE-DFS 120
Query: 121 SESVETRFLEEEAKGTYEDNVEKGWKNFGSETSETEFIKKDIGTDIRNRNLAYDMIQFET 180
S + + ++G N EK K GS + E + + R ++FE
Sbjct: 121 SWEFGAFRIPKASEGYGVINREKDEKGEGSRSDGLEI------SSVMKRWEQLKELRFEV 180
Query: 181 PQLD---AFLENAFLFEKEE----VQILTLAPEVEFNLETLN---QGLLKYPSKVKESVY 240
++D A E+ F +EE V +L P+++ +L+ ++ ++Y S + ESVY
Sbjct: 181 VEVDLLMALQEDIASFGEEESGGGVTLLLRVPDMKIHLDFIDIETDIKIRYQSDLPESVY 240
Query: 241 AVEHITSEYLLDQGSCLFEDDA--QDQKLLHRLTFPFLEV-------DAMVLETSAFFSL 300
VE + + G +D + L H P LEV D + ET + +
Sbjct: 241 QVEKVPVKDNDGNGHSSLREDCCLEIAALDHGAVIPRLEVSRNSWELDDCLTETDR-YGV 300
Query: 301 QDELFFILENTEPPHRIQDDNLLVNNEEYLCSMKCDVEEFLSD----HFL---RPCALSE 360
D + L+ + H + + E+L S D+ F+ + H + +P +
Sbjct: 301 FDNVVRHLDEAQIQHSV------FKSTEFLRSTDMDMLTFVCEDAPCHDIQVDKPAEIKA 360
Query: 361 LASPDI--SGGSDLMSMIETLEIPVNSTKSSCDLPVGPVIFEEFQLLDIYMNQLFEVFFD 420
D+ G+ L+ L P+ + DLP ++ EE Q++D + +F++
Sbjct: 361 AVEMDVVRINGNILLEKNSAL-YPLKPDGTCSDLPCS-ILLEEVQIIDFPSDNVFKMLVQ 420
Query: 421 LELSAASEISECMSIENTNFKSFNELIVCHELALVDDTFKSLPVPILSSQGSERPLYAFI 480
E + + E + + E +V ELALVDDTF+SLP PIL+ + R I
Sbjct: 421 SETNKMNISDEIFKDDFDPARRLYESMVSCELALVDDTFRSLPTPILNDDIAVRSRVPPI 480
Query: 481 EDVLANLNGQSLSASDGIYLDWHLLEENSCSSGVYSSYQNMLEEINLKPVEFD-QEPCEN 540
+++L +L LSASDGIYLDWHLL E C+ + SY +M+EE + + Q C++
Sbjct: 481 QEILCSLKPHPLSASDGIYLDWHLLLEGPCNREICCSYASMVEEAKTCHLSSELQRSCQS 540
Query: 541 DSIFYRYVFSDDALVRERTEDKGELRESFPDGISMLPSQTIDVASSKLLNDRCQQKG--- 600
S+F F +D + +D+ + + + +P+ +C+Q+G
Sbjct: 541 TSVFVS-DFLEDFQRSPKLQDEDKHSDIY------VPAPLSHDPQKLEATQKCEQEGGTR 600
Query: 601 RQDLAAVGITEKALSSWKSKSESNDLNFFLNSQKPAGARKGEFLFSATDTNTMLPKVP-C 660
EK+ S + S S DLNF+LN + + + NT VP
Sbjct: 601 NHSSMKRPSPEKSSSFPELISHSGDLNFYLNVRSATKS-------GTNNENTSTLDVPHS 660
Query: 661 DGQLTSHPSMYSADVSLKQLNVALHQVCLSDNILHLINNSEKTYLAILQNEIELRKTYLP 720
+ Q S + D ++ +H V S+ I LI +Y + LQ R ++
Sbjct: 661 EEQALSLSTRAKVDKLIE-----IHPVSPSNLIQGLIEQIHASYTSALQESTYWRHSFSD 720
Query: 721 YVAEDYFLMLSLPKQKLIDCIKKIYLQGASNYWEEK-IMTLALLYATKQIAWYLCFYGIY 780
L + KQKL++ I +G+ N+ E K M L +LYA KQ+A+YLCF+G++
Sbjct: 721 EQG------LGISKQKLLELITGEGSEGSYNHCEHKDKMELIVLYALKQVAYYLCFFGLH 780
Query: 781 PAHLYLKKLCQSLDCLKSRLGFLVSLIEDARRMVDREITISHPALTTIQDILCSKTSTST 840
AHLY+ L +SL+ RL ++ I +A+R +R++ SHP+L+ I+ IL S
Sbjct: 781 AAHLYISNLTRSLENTPERLKHILWSISEAQRKSERQLFESHPSLSCIETILRSNKQIDQ 840
Query: 841 LKVLVVANEIFWWSLKKLFGSMGLSFEELNYEGPT------DQQVSNANIMVDDLASNCL 900
K+L+VA+ FW L + SM ++F E T ++ S A ++ + L S+C+
Sbjct: 841 -KILIVADRAFWLPLGQKLASMRMTFVEFGQNPATTFVDLVNKTNSTAWVLEELLKSDCI 900
Query: 901 LVSQEHISESFPFNKFSTILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKYGNCKAF 960
L+ ++I SFPF+KF ILEYGG N SS + + KL +P LHF+ +++D A
Sbjct: 901 LLDNKNIPASFPFDKFGIILEYGGPNKSSTLLSLAPKLDGLPPLHFLYVKVDGKDFPAAL 960
Query: 961 CEGVDLPQHNELTIE------ENSLVENQTRM-LEKLLNFLPVDD----------KYILA 1020
E Q + T++ + L E +M + LNF+P + K+ A
Sbjct: 961 VEDNHKDQDLKSTLDKVLLTLQKDLQERMNKMRIVDSLNFIPATNQLQGLQEKRSKHFAA 1020
Query: 1021 SPEATIEAEDCKVPLQ-----------VPVVPDKSPHID--------------------- 1080
+ +D LQ V+ D+ HI
Sbjct: 1021 DATKELLPDDQPHRLQNLNKKNTFDSHNVVLADEQLHIQQTLSNKPVVNSQCVPTVEKSS 1080
Query: 1081 ----------------------------------FLSFPEAIVIVNTQKFEKEMIVSRRS 1140
LS P+ +++VNT K M+VSRRS
Sbjct: 1081 STSSVSANVLKDPQENQSTTDLPSCVKNDCIMPGRLSVPDVVIVVNTGNHGKTMLVSRRS 1140
Query: 1141 SYQRILALEKEGVQVVERDLSLPVDLIITPGICLMWYDCTSIHMKASTPKEASSGLNLCI 1200
SYQ+ILALEK G+QVVERD+ LPVDLI++ +CL+WY+ T +SG+ +
Sbjct: 1141 SYQQILALEKGGMQVVERDIDLPVDLILSAAVCLVWYETALFEANELTTSAETSGIKENV 1200
Query: 1201 ENIATDVLTSLSFAFSGCVLVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSEL 1260
ENIAT++L S+SF+F+GC++VFEGE LS VM+SSD LY AAASL+++ QLF S++
Sbjct: 1201 ENIATNILMSVSFSFTGCIMVFEGEADFLSAVMDSSDSLYTAAASLDMNLQLFFSHTPRS 1260
Query: 1261 TNEIILGCIENVSKPMTGHLYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLADFL 1320
T+EIIL CI NV+ L P + ESE+LAESFLTSFPSINP++A+ +LSS L +FL
Sbjct: 1261 TDEIILNCITNVTSCYKAPL-PDIPESESLAESFLTSFPSINPVSAYMLLSSGGSLVEFL 1320
Query: 1321 EWPHESRLHAIKKYCIPDESVALFSALCKYGEREDSKSVMTDCSSSVSSGPDSEKCYFKG 1380
WPHE R+ A+ KY + + ++LF+ALCK+GE +S+SVMT+CSS S D + +
Sbjct: 1321 SWPHERRIQAVGKYLLSPKIISLFNALCKFGELGESRSVMTECSSVDS---DISSAFLQS 1380
Query: 1381 NSERKRRNFTGGTQCIDKNMDFLNSDTLNPFT---AGTTETLAASKLFGSQMFEDPEIFC 1440
+RK+R+ C L SD+LN A E + SKL F
Sbjct: 1381 PRKRKQRSLQA---CAVPTNKLLFSDSLNQIPGDYAEHAEVFSPSKL---------RKFS 1440
Query: 1441 DLKGLSSSVNHFFDQNHNGESFDATIAMDPISVSKPCDSWISKAPEISDKIRKRCSSYVQ 1500
D+ + F +FD ++ M ++ S + +K +
Sbjct: 1441 DMDNTIPELPDVF-------TFDESLNM--------------RSEGFSYQQKKHDVDAIP 1500
Query: 1501 NQGLYKKKINNLHNMNKSEKQHEELIGEVVNLIDTPVLKDDFATMTPMNFLPSMLDHEKD 1560
+ +N + + + + G +V+ D P + +F P
Sbjct: 1501 GNQVINDDFSN--GLTPNNQAYNRRTGNMVDTFDLP-WQPEFGGTHP------------- 1560
Query: 1561 SSRKSKIQRRLSYGQSDS-PLCAVDIASNSS-SDWQSSGGLDNHFPDRSFKPSIVPLRYK 1620
S+ + R S ++ S P+ + N +W SGG +
Sbjct: 1561 -SKSTFHTSRPSCSRTHSNPVFSTAFEINDDPGEWNISGGTKQTW--------------- 1620
Query: 1621 DGHSDEGLIQNSVR---DSKVLFSLSE-KGTSHSDVTPLSIALRSKHLQDSSPWTMEFLN 1638
G + G + +S R D++ E S + + S S W +++L
Sbjct: 1621 KGLAHGGTVDDSYRYDMDNRYHEPRDEIMQHPASSLAFQKLDFGSHATSQGSCWEIDYLR 1680
BLAST of Tan0017993 vs. NCBI nr
Match:
XP_022971833.1 (protein SHORTAGE IN CHIASMATA 1 isoform X2 [Cucurbita maxima])
HSP 1 Score: 2668.3 bits (6915), Expect = 0.0e+00
Identity = 1382/1667 (82.90%), Postives = 1479/1667 (88.72%), Query Frame = 0
Query: 1 MRTRFLDIDYFAPENESFHRLPVPHLASKPLFTVADLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FAP NESFHRLPVPHL S PL TV DLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPQRIDDENDYRSAGGQSSRFQGFTERNFSSESVETRFLEEEAKGTYEDNVEKG 120
+FFDDVLP+RI+D++ YR AG QSS F G ER FSSESV TR EEEAKGTYEDN+E
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFIKKDIGTDIRNRNLAYDMIQFETPQLDAFLENAFLFEKEEVQILTLA 180
WKNFGSETSE EF+KKDIGT+IRNRN + DMIQFETPQLDAFLENAFLFE+EEVQILT
Sbjct: 121 WKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAM 180
Query: 181 PEVEFNLETLNQGLLKYPSKVKESVYAVEHITSEYLLDQGSCLFEDD-AQDQKLLHRLTF 240
PEVEF+LETLNQGLLKYPS+VKES+Y VE I SEYLLDQ SCLFEDD AQDQKL H+ TF
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDAMVLETSAFFSLQDELFFILENTEPPHRIQDDNLLVNNEEYLCSMKCDVEEFLS 300
PFLEVD MVLET AF SLQDELFFILENTE HRIQDDNLLVNNEEYL M+CD EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLS 300
Query: 301 DHFLRPCALSELASPDISGG-SDLMSMIETLEIPVNS---TKSSCDLPVGPVIFEEFQLL 360
DHFLRPCA+SELASPDISGG SDLMSM+ETLEI V+S TKSSCDL V P IFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYMNQLFEVFFDLELSAASEISECMSIENTNFKSFNELIVCHELALVDDTFKSLPVPIL 420
D Y NQ F V FDLE+SA SEI++C SIENTNFKSFNELIVCHEL LVDD FKSLPVPIL
Sbjct: 361 DTYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPIL 420
Query: 421 SSQGSERPLYAFIEDVLANLNGQSLSASDGIYLDWHLLEENSCSSGVYSSYQNMLEEINL 480
SSQGSE+PL AFIEDVLANLN QSLSASDGIYLDWHLL+ +S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINL 480
Query: 481 KPVEFDQEPCENDSIFYRYVFSDDALVRERTEDKGELRESFPDGISMLPSQTIDVASSKL 540
KPVEFD+EPCEND IFYRYVFSDDALVRERTEDKGEL+ESFP+GI ML QTIDVAS KL
Sbjct: 481 KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKL 540
Query: 541 LNDRCQQKGRQDLAAVGITEKALSSWKSKSESNDLNFFLNSQKPAGARKGEFLFSATDTN 600
LN+RCQQK RQ LAAVG +EKALSSWKSKSESNDL FFLNSQKPAGARK E +FSA DTN
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTN 600
Query: 601 TMLPKVPCDGQLTSHPSMYSADVSLKQLNVALHQVCLSDNILHLINNSEKTYLAILQNEI 660
T LPKV DG LT+ PSM SAD SLKQLNVA+HQVCLSDNILHLINNSEKTYLAILQNE
Sbjct: 601 TTLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPYVAEDYFLMLSLPKQKLIDCIKKIYLQGASNYWEEKIMTLALLYATKQIAWY 720
ELRK YLPYVAEDY LMLSLPKQKLIDCIKKIYLQG + YWEEKIMTLA LYATKQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIYPAHLYLKKLCQSLDCLKSRLGFLVSLIEDARRMVDREITISHPALTTIQDILC 780
LCF+GI+PAHLYLKKLCQS +CLKSRLGFLVS IE+A +MVD+EITISHPALTTIQ+ILC
Sbjct: 721 LCFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILC 780
Query: 781 SKTSTSTLKVLVVANEIFWWSLKKLFGSMGLSFEELNYEGPTDQQVSNANIMVDDLASNC 840
S+TSTS+LKVLVVAN+IFWWSLK L GS+G+SF E+NY TD+QVSNAN MVDDLASNC
Sbjct: 781 SRTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASNC 840
Query: 841 LLVSQEHISESFPFNKFSTILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKYGNCKA 900
LLVSQE+IS SFPFNKFS +LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDK GNCKA
Sbjct: 841 LLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA 900
Query: 901 FCEGVDLPQHNELTIEENSLVENQTRMLEKLLNFLPVDDKYILASPEATIEAEDCKVPLQ 960
FCEGVD PQHNELTIEE SLVENQT MLEKLLNFLPV++KYILAS + TIEAE+ +VPL+
Sbjct: 901 FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPLR 960
Query: 961 VPVVP--DKSPHIDFLSFPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDL 1020
PVVP DKS H D +SFPEAI+IVNTQKFEKEMIV RRSSYQRILALEKEGVQVVERDL
Sbjct: 961 APVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDL 1020
Query: 1021 SLPVDLIITPGICLMWYDCTSIHMKASTPKEASSGLNLCIENIATDVLTSLSFAFSGCVL 1080
LPVDLII PGICL WYDCT+I K ST EAS LNLCIENIATDVLTSLSFAF GCVL
Sbjct: 1021 CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVL 1080
Query: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTNEIILGCIENVSKPMTGHL 1140
VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELT+EIILGCIENVSK MT +
Sbjct: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRI 1140
Query: 1141 YPKMSESETLAESFLTSFPSINPLTAHGILSSESFLADFLEWPHESRLHAIKKYCIPDES 1200
YPKMSESETLAESFLTSFPSINPL AHGILSSES LADFLEWPHE RLHAI+KY IPD+
Sbjct: 1141 YPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDC 1200
Query: 1201 VALFSALCKYGEREDSKSVMTDCSSSVSSGPDSEKCYFKGNSERKRRNFTGGTQCIDKNM 1260
++LFSALCKYGEREDSKSVMTDCSSS+SSG DSEKC+F GNSERKRRNFTGGTQCI+KN
Sbjct: 1201 ISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKNT 1260
Query: 1261 DFLNSDTLNPFTAGTTETLAASKLFGSQMFEDPEIFCDLKGLSSSVNHFFDQNHNGESFD 1320
D L S+TLNPFTAGT ETL ASK FGSQ+FEDPEIFCDLKGLSSSVN+FFDQNHN SFD
Sbjct: 1261 DCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFD 1320
Query: 1321 ATIAMDPISVSKPCDSWISKAPEISDKIRKRCSSYVQNQGL--YKKKINNLHNMNKSEKQ 1380
AT++MDP V KP D WIS APEISD+IR+RCSS+VQNQGL KKKI+N HNMNKSE
Sbjct: 1321 ATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMNKSENH 1380
Query: 1381 HEELIGEVVNLIDTPVLKDDFATMTPMNFLPSMLDHEKDSSRKSKIQRRLSYGQSDSPLC 1440
HEELI EV NLID PVLKD FATM PMNFLPSMLD+E DSSRKSKIQRRLSYGQSD P C
Sbjct: 1381 HEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQSDHPFC 1440
Query: 1441 AVDIASNSSSDW--------QSSGGLDNHFPDRSFKPSIVPLRYKDGHSDEGLIQNSVRD 1500
AVD+ +NSSSD+ QSS GLDN FPD SF+PSI+PLRYKD H DEGLIQN +RD
Sbjct: 1441 AVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQNPLRD 1500
Query: 1501 SKVLFSLSEKGTSHSDVTPLSIALRSKHLQDSSPWTMEFLNRIREKSRNRQHSVPRGSSS 1560
SKV FSLSEK TSHSDVTPLS+ALRSKHLQ+SSPWTMEFLNRIREKSRNRQHSVPRGSSS
Sbjct: 1501 SKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSS 1560
Query: 1561 PFPEHLDNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRQKQSMQSSNSSKNLLVPTSE 1620
PFPE+L NVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKR K S QSSNSSKN+LV T E
Sbjct: 1561 PFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATRE 1620
Query: 1621 LSSWTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKSSQKLGNK 1651
LSS TPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+SQKLGNK
Sbjct: 1621 LSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1667
BLAST of Tan0017993 vs. NCBI nr
Match:
XP_022971832.1 (protein SHORTAGE IN CHIASMATA 1 isoform X1 [Cucurbita maxima])
HSP 1 Score: 2662.5 bits (6900), Expect = 0.0e+00
Identity = 1382/1671 (82.70%), Postives = 1479/1671 (88.51%), Query Frame = 0
Query: 1 MRTRFLDIDYFAPENESFHRLPVPHLASKPLFTVADLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FAP NESFHRLPVPHL S PL TV DLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPQRIDDENDYRSAGGQSSRFQGFTERNFSSESVETRFLEEEAKGTYEDNVEKG 120
+FFDDVLP+RI+D++ YR AG QSS F G ER FSSESV TR EEEAKGTYEDN+E
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFIKKDIGTDIRNRNLAYDMIQFETPQLDAFLENAFLFEKEEVQILTLA 180
WKNFGSETSE EF+KKDIGT+IRNRN + DMIQFETPQLDAFLENAFLFE+EEVQILT
Sbjct: 121 WKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAM 180
Query: 181 PEVEFNLETLNQGLLKYPSKVKESVYAVEHITSEYLLDQGSCLFEDD-AQDQKLLHRLTF 240
PEVEF+LETLNQGLLKYPS+VKES+Y VE I SEYLLDQ SCLFEDD AQDQKL H+ TF
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDAMVLETSAFFSLQDELFFILENTEPPHRIQDDNLLVNNEEYLCSMKCDVEEFLS 300
PFLEVD MVLET AF SLQDELFFILENTE HRIQDDNLLVNNEEYL M+CD EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLS 300
Query: 301 DHFLRPCALSELASPDISGG-SDLMSMIETLEIPVNS---TKSSCDLPVGPVIFEEFQLL 360
DHFLRPCA+SELASPDISGG SDLMSM+ETLEI V+S TKSSCDL V P IFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYMNQLFEVFFDLELSAASEISECMSIENTNFKSFNELIVCHELALVDDTFKSLPVPIL 420
D Y NQ F V FDLE+SA SEI++C SIENTNFKSFNELIVCHEL LVDD FKSLPVPIL
Sbjct: 361 DTYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPIL 420
Query: 421 SSQGSERPLYAFIEDVLANLNGQSLSASDGIYLDWHLLEENSCSSGVYSSYQNMLEEINL 480
SSQGSE+PL AFIEDVLANLN QSLSASDGIYLDWHLL+ +S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINL 480
Query: 481 KPVEFDQEPCENDSIFYRYVFSDDALVRERTEDKGELRESFPDGISMLPSQTIDVASSKL 540
KPVEFD+EPCEND IFYRYVFSDDALVRERTEDKGEL+ESFP+GI ML QTIDVAS KL
Sbjct: 481 KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKL 540
Query: 541 LNDRCQQKGRQDLAAVGITEKALSSWKSKSESNDLNFFLNSQKPAGARKGEFLFSATDTN 600
LN+RCQQK RQ LAAVG +EKALSSWKSKSESNDL FFLNSQKPAGARK E +FSA DTN
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTN 600
Query: 601 TMLPKVPCDGQLTSHPSMYSADVSLKQLNVALHQVCLSDNILHLINNSEKTYLAILQNEI 660
T LPKV DG LT+ PSM SAD SLKQLNVA+HQVCLSDNILHLINNSEKTYLAILQNE
Sbjct: 601 TTLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPYVAEDYFLMLSLPKQKLIDCIKKIYLQGASNYWEEKIMTLALLYATKQIAWY 720
ELRK YLPYVAEDY LMLSLPKQKLIDCIKKIYLQG + YWEEKIMTLA LYATKQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIYPAHLYLKKLCQSLDCLKSRLGFLVSLIEDARRMVDREITISHPALTTIQDILC 780
LCF+GI+PAHLYLKKLCQS +CLKSRLGFLVS IE+A +MVD+EITISHPALTTIQ+ILC
Sbjct: 721 LCFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILC 780
Query: 781 SKTSTSTLKVLVVANEIFWWSLKKLFGSMGLSFEELNYEGPTDQQVSNANIMVDDLASNC 840
S+TSTS+LKVLVVAN+IFWWSLK L GS+G+SF E+NY TD+QVSNAN MVDDLASNC
Sbjct: 781 SRTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASNC 840
Query: 841 LLVSQEHISESFPFNKFSTILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKYGNCKA 900
LLVSQE+IS SFPFNKFS +LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDK GNCKA
Sbjct: 841 LLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA 900
Query: 901 FCEGVDLPQHNELTIEENSLVENQTRMLEKLLNFLPVDDKYILASPEATIEAEDCKVPLQ 960
FCEGVD PQHNELTIEE SLVENQT MLEKLLNFLPV++KYILAS + TIEAE+ +VPL+
Sbjct: 901 FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPLR 960
Query: 961 VPVVP--DKSPHIDFLSFPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDL 1020
PVVP DKS H D +SFPEAI+IVNTQKFEKEMIV RRSSYQRILALEKEGVQVVERDL
Sbjct: 961 APVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDL 1020
Query: 1021 SLPVDLIITPGICLMWYDCTSIHMKASTPKEASSGLNLCIENIATDVLTSLSFAFSGCVL 1080
LPVDLII PGICL WYDCT+I K ST EAS LNLCIENIATDVLTSLSFAF GCVL
Sbjct: 1021 CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVL 1080
Query: 1081 ----VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTNEIILGCIENVSKPM 1140
VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELT+EIILGCIENVSK M
Sbjct: 1081 ISFQVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLM 1140
Query: 1141 TGHLYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLADFLEWPHESRLHAIKKYCI 1200
T +YPKMSESETLAESFLTSFPSINPL AHGILSSES LADFLEWPHE RLHAI+KY I
Sbjct: 1141 TRRIYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSI 1200
Query: 1201 PDESVALFSALCKYGEREDSKSVMTDCSSSVSSGPDSEKCYFKGNSERKRRNFTGGTQCI 1260
PD+ ++LFSALCKYGEREDSKSVMTDCSSS+SSG DSEKC+F GNSERKRRNFTGGTQCI
Sbjct: 1201 PDDCISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCI 1260
Query: 1261 DKNMDFLNSDTLNPFTAGTTETLAASKLFGSQMFEDPEIFCDLKGLSSSVNHFFDQNHNG 1320
+KN D L S+TLNPFTAGT ETL ASK FGSQ+FEDPEIFCDLKGLSSSVN+FFDQNHN
Sbjct: 1261 EKNTDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNL 1320
Query: 1321 ESFDATIAMDPISVSKPCDSWISKAPEISDKIRKRCSSYVQNQGL--YKKKINNLHNMNK 1380
SFDAT++MDP V KP D WIS APEISD+IR+RCSS+VQNQGL KKKI+N HNMNK
Sbjct: 1321 ASFDATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMNK 1380
Query: 1381 SEKQHEELIGEVVNLIDTPVLKDDFATMTPMNFLPSMLDHEKDSSRKSKIQRRLSYGQSD 1440
SE HEELI EV NLID PVLKD FATM PMNFLPSMLD+E DSSRKSKIQRRLSYGQSD
Sbjct: 1381 SENHHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQSD 1440
Query: 1441 SPLCAVDIASNSSSDW--------QSSGGLDNHFPDRSFKPSIVPLRYKDGHSDEGLIQN 1500
P CAVD+ +NSSSD+ QSS GLDN FPD SF+PSI+PLRYKD H DEGLIQN
Sbjct: 1441 HPFCAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQN 1500
Query: 1501 SVRDSKVLFSLSEKGTSHSDVTPLSIALRSKHLQDSSPWTMEFLNRIREKSRNRQHSVPR 1560
+RDSKV FSLSEK TSHSDVTPLS+ALRSKHLQ+SSPWTMEFLNRIREKSRNRQHSVPR
Sbjct: 1501 PLRDSKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPR 1560
Query: 1561 GSSSPFPEHLDNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRQKQSMQSSNSSKNLLV 1620
GSSSPFPE+L NVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKR K S QSSNSSKN+LV
Sbjct: 1561 GSSSPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLV 1620
Query: 1621 PTSELSSWTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKSSQKLGNK 1651
T ELSS TPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+SQKLGNK
Sbjct: 1621 ATRELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1671
BLAST of Tan0017993 vs. NCBI nr
Match:
XP_022971834.1 (protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita maxima])
HSP 1 Score: 2659.8 bits (6893), Expect = 0.0e+00
Identity = 1381/1667 (82.84%), Postives = 1477/1667 (88.60%), Query Frame = 0
Query: 1 MRTRFLDIDYFAPENESFHRLPVPHLASKPLFTVADLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FAP NESFHRLPVPHL S PL TV DLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPQRIDDENDYRSAGGQSSRFQGFTERNFSSESVETRFLEEEAKGTYEDNVEKG 120
+FFDDVLP+RI+D++ YR AG QSS F G ER FSSESV TR EEEAKGTYEDN+E
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFIKKDIGTDIRNRNLAYDMIQFETPQLDAFLENAFLFEKEEVQILTLA 180
WKNFGSETSE EF KDIGT+IRNRN + DMIQFETPQLDAFLENAFLFE+EEVQILT
Sbjct: 121 WKNFGSETSEMEF--KDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAM 180
Query: 181 PEVEFNLETLNQGLLKYPSKVKESVYAVEHITSEYLLDQGSCLFEDD-AQDQKLLHRLTF 240
PEVEF+LETLNQGLLKYPS+VKES+Y VE I SEYLLDQ SCLFEDD AQDQKL H+ TF
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDAMVLETSAFFSLQDELFFILENTEPPHRIQDDNLLVNNEEYLCSMKCDVEEFLS 300
PFLEVD MVLET AF SLQDELFFILENTE HRIQDDNLLVNNEEYL M+CD EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLS 300
Query: 301 DHFLRPCALSELASPDISGG-SDLMSMIETLEIPVNS---TKSSCDLPVGPVIFEEFQLL 360
DHFLRPCA+SELASPDISGG SDLMSM+ETLEI V+S TKSSCDL V P IFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYMNQLFEVFFDLELSAASEISECMSIENTNFKSFNELIVCHELALVDDTFKSLPVPIL 420
D Y NQ F V FDLE+SA SEI++C SIENTNFKSFNELIVCHEL LVDD FKSLPVPIL
Sbjct: 361 DTYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPIL 420
Query: 421 SSQGSERPLYAFIEDVLANLNGQSLSASDGIYLDWHLLEENSCSSGVYSSYQNMLEEINL 480
SSQGSE+PL AFIEDVLANLN QSLSASDGIYLDWHLL+ +S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINL 480
Query: 481 KPVEFDQEPCENDSIFYRYVFSDDALVRERTEDKGELRESFPDGISMLPSQTIDVASSKL 540
KPVEFD+EPCEND IFYRYVFSDDALVRERTEDKGEL+ESFP+GI ML QTIDVAS KL
Sbjct: 481 KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKL 540
Query: 541 LNDRCQQKGRQDLAAVGITEKALSSWKSKSESNDLNFFLNSQKPAGARKGEFLFSATDTN 600
LN+RCQQK RQ LAAVG +EKALSSWKSKSESNDL FFLNSQKPAGARK E +FSA DTN
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTN 600
Query: 601 TMLPKVPCDGQLTSHPSMYSADVSLKQLNVALHQVCLSDNILHLINNSEKTYLAILQNEI 660
T LPKV DG LT+ PSM SAD SLKQLNVA+HQVCLSDNILHLINNSEKTYLAILQNE
Sbjct: 601 TTLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPYVAEDYFLMLSLPKQKLIDCIKKIYLQGASNYWEEKIMTLALLYATKQIAWY 720
ELRK YLPYVAEDY LMLSLPKQKLIDCIKKIYLQG + YWEEKIMTLA LYATKQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIYPAHLYLKKLCQSLDCLKSRLGFLVSLIEDARRMVDREITISHPALTTIQDILC 780
LCF+GI+PAHLYLKKLCQS +CLKSRLGFLVS IE+A +MVD+EITISHPALTTIQ+ILC
Sbjct: 721 LCFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILC 780
Query: 781 SKTSTSTLKVLVVANEIFWWSLKKLFGSMGLSFEELNYEGPTDQQVSNANIMVDDLASNC 840
S+TSTS+LKVLVVAN+IFWWSLK L GS+G+SF E+NY TD+QVSNAN MVDDLASNC
Sbjct: 781 SRTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASNC 840
Query: 841 LLVSQEHISESFPFNKFSTILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKYGNCKA 900
LLVSQE+IS SFPFNKFS +LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDK GNCKA
Sbjct: 841 LLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA 900
Query: 901 FCEGVDLPQHNELTIEENSLVENQTRMLEKLLNFLPVDDKYILASPEATIEAEDCKVPLQ 960
FCEGVD PQHNELTIEE SLVENQT MLEKLLNFLPV++KYILAS + TIEAE+ +VPL+
Sbjct: 901 FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPLR 960
Query: 961 VPVVP--DKSPHIDFLSFPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDL 1020
PVVP DKS H D +SFPEAI+IVNTQKFEKEMIV RRSSYQRILALEKEGVQVVERDL
Sbjct: 961 APVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDL 1020
Query: 1021 SLPVDLIITPGICLMWYDCTSIHMKASTPKEASSGLNLCIENIATDVLTSLSFAFSGCVL 1080
LPVDLII PGICL WYDCT+I K ST EAS LNLCIENIATDVLTSLSFAF GCVL
Sbjct: 1021 CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVL 1080
Query: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTNEIILGCIENVSKPMTGHL 1140
VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELT+EIILGCIENVSK MT +
Sbjct: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRI 1140
Query: 1141 YPKMSESETLAESFLTSFPSINPLTAHGILSSESFLADFLEWPHESRLHAIKKYCIPDES 1200
YPKMSESETLAESFLTSFPSINPL AHGILSSES LADFLEWPHE RLHAI+KY IPD+
Sbjct: 1141 YPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDC 1200
Query: 1201 VALFSALCKYGEREDSKSVMTDCSSSVSSGPDSEKCYFKGNSERKRRNFTGGTQCIDKNM 1260
++LFSALCKYGEREDSKSVMTDCSSS+SSG DSEKC+F GNSERKRRNFTGGTQCI+KN
Sbjct: 1201 ISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKNT 1260
Query: 1261 DFLNSDTLNPFTAGTTETLAASKLFGSQMFEDPEIFCDLKGLSSSVNHFFDQNHNGESFD 1320
D L S+TLNPFTAGT ETL ASK FGSQ+FEDPEIFCDLKGLSSSVN+FFDQNHN SFD
Sbjct: 1261 DCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFD 1320
Query: 1321 ATIAMDPISVSKPCDSWISKAPEISDKIRKRCSSYVQNQGL--YKKKINNLHNMNKSEKQ 1380
AT++MDP V KP D WIS APEISD+IR+RCSS+VQNQGL KKKI+N HNMNKSE
Sbjct: 1321 ATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMNKSENH 1380
Query: 1381 HEELIGEVVNLIDTPVLKDDFATMTPMNFLPSMLDHEKDSSRKSKIQRRLSYGQSDSPLC 1440
HEELI EV NLID PVLKD FATM PMNFLPSMLD+E DSSRKSKIQRRLSYGQSD P C
Sbjct: 1381 HEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQSDHPFC 1440
Query: 1441 AVDIASNSSSDW--------QSSGGLDNHFPDRSFKPSIVPLRYKDGHSDEGLIQNSVRD 1500
AVD+ +NSSSD+ QSS GLDN FPD SF+PSI+PLRYKD H DEGLIQN +RD
Sbjct: 1441 AVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQNPLRD 1500
Query: 1501 SKVLFSLSEKGTSHSDVTPLSIALRSKHLQDSSPWTMEFLNRIREKSRNRQHSVPRGSSS 1560
SKV FSLSEK TSHSDVTPLS+ALRSKHLQ+SSPWTMEFLNRIREKSRNRQHSVPRGSSS
Sbjct: 1501 SKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSS 1560
Query: 1561 PFPEHLDNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRQKQSMQSSNSSKNLLVPTSE 1620
PFPE+L NVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKR K S QSSNSSKN+LV T E
Sbjct: 1561 PFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATRE 1620
Query: 1621 LSSWTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKSSQKLGNK 1651
LSS TPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+SQKLGNK
Sbjct: 1621 LSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1665
BLAST of Tan0017993 vs. NCBI nr
Match:
XP_023554171.1 (protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2659.8 bits (6893), Expect = 0.0e+00
Identity = 1379/1667 (82.72%), Postives = 1474/1667 (88.42%), Query Frame = 0
Query: 1 MRTRFLDIDYFAPENESFHRLPVPHLASKPLFTVADLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FAP NESFHRLPVPHL S PL TV DLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPQRIDDENDYRSAGGQSSRFQGFTERNFSSESVETRFLEEEAKGTYEDNVEKG 120
+FFDDVLP+RI+D++ YR AG QSS F G ER FSS SV TR E+EAKGTYEDN+E
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSGSVGTRLREQEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFIKKDIGTDIRNRNLAYDMIQFETPQLDAFLENAFLFEKEEVQILTLA 180
WKNFGSETSE EFIKKDIGT+IRNRN + DMIQFETPQLDAFLENAFLFEKEEVQILT
Sbjct: 121 WKNFGSETSEMEFIKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEKEEVQILTGM 180
Query: 181 PEVEFNLETLNQGLLKYPSKVKESVYAVEHITSEYLLDQGSCLFEDD-AQDQKLLHRLTF 240
PEVEF+LETLNQGLLKYPS+VKES+Y VE I SEYLLDQ SCLFEDD AQDQKL H+ TF
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDAMVLETSAFFSLQDELFFILENTEPPHRIQDDNLLVNNEEYLCSMKCDVEEFLS 300
PFLEVD MVLET AF SLQDELFFILENTE H IQDDNLLVNNEEYL SM+CD EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHMIQDDNLLVNNEEYLSSMRCDAEEFLS 300
Query: 301 DHFLRPCALSELASPDISGG-SDLMSMIETLEIPVNS---TKSSCDLPVGPVIFEEFQLL 360
DHFLRPCA+SELASPDISGG SDLMSM+ETLEI V+S TKSSCDL V P IFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGLSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYMNQLFEVFFDLELSAASEISECMSIENTNFKSFNELIVCHELALVDDTFKSLPVPIL 420
D Y NQ F V DLE+SA SEI++C SIENTNFKSFNELIVCHEL LVDDTFKSLPVPIL
Sbjct: 361 DTYSNQHFGVILDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPIL 420
Query: 421 SSQGSERPLYAFIEDVLANLNGQSLSASDGIYLDWHLLEENSCSSGVYSSYQNMLEEINL 480
SSQGSE+PL AFIEDVLANLN QSLSASDGIYLDWHLL+E+S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEINL 480
Query: 481 KPVEFDQEPCENDSIFYRYVFSDDALVRERTEDKGELRESFPDGISMLPSQTIDVASSKL 540
KPVEFDQEPCEND IFYRYVFSDDALVRERTEDKGEL+ESFP+GI ML QTIDVASSKL
Sbjct: 481 KPVEFDQEPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSKL 540
Query: 541 LNDRCQQKGRQDLAAVGITEKALSSWKSKSESNDLNFFLNSQKPAGARKGEFLFSATDTN 600
LN+RCQQK RQ LAAVG +EKALSSWKSKSESNDL FFLNSQKPA RK E +FS DTN
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPARVRKSESVFSEIDTN 600
Query: 601 TMLPKVPCDGQLTSHPSMYSADVSLKQLNVALHQVCLSDNILHLINNSEKTYLAILQNEI 660
T LPKVP DG LT+ PSM SAD SLKQLNVA+HQVCLSDNILHLINNSEKTYLAILQNE
Sbjct: 601 TTLPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPYVAEDYFLMLSLPKQKLIDCIKKIYLQGASNYWEEKIMTLALLYATKQIAWY 720
ELRK YLPYVAEDY LMLSLPKQ LIDCIKKIYLQG + YWEEKIMTLA LYATKQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQMLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIYPAHLYLKKLCQSLDCLKSRLGFLVSLIEDARRMVDREITISHPALTTIQDILC 780
LCFYGI+PAHLYLKKLCQS +CLKSRLGFLVS IE+A +MV REITISHPALTTIQ+ILC
Sbjct: 721 LCFYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEILC 780
Query: 781 SKTSTSTLKVLVVANEIFWWSLKKLFGSMGLSFEELNYEGPTDQQVSNANIMVDDLASNC 840
S+TS S+LKVLVVAN+IFWWSLKKL GS+G+SF ELNY TD+QVSNAN MVDDLASNC
Sbjct: 781 SRTSISSLKVLVVANQIFWWSLKKLLGSLGISFAELNYGSLTDEQVSNANAMVDDLASNC 840
Query: 841 LLVSQEHISESFPFNKFSTILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKYGNCKA 900
LLVS+E+IS SFPFNKFS +LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDK GNCKA
Sbjct: 841 LLVSEEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA 900
Query: 901 FCEGVDLPQHNELTIEENSLVENQTRMLEKLLNFLPVDDKYILASPEATIEAEDCKVPLQ 960
FCEGVD PQHNELTIEE SLVENQT MLEKLLNFLPV++KYILASP+ TIEAE+ +V L+
Sbjct: 901 FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAENRRVSLR 960
Query: 961 VPVVP--DKSPHIDFLSFPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDL 1020
PVVP DKS H D +SFPEAI+IVNTQKFEKEMIV RRSSYQRILALEKEGVQVVERDL
Sbjct: 961 APVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDL 1020
Query: 1021 SLPVDLIITPGICLMWYDCTSIHMKASTPKEASSGLNLCIENIATDVLTSLSFAFSGCVL 1080
LPVDLII PGICL WYDCT+I K ST EAS LNLCIENIATDVLTSLSFAF GCVL
Sbjct: 1021 CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLSLNLCIENIATDVLTSLSFAFRGCVL 1080
Query: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTNEIILGCIENVSKPMTGHL 1140
VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELT+EIILGCIENVSK MT +
Sbjct: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRI 1140
Query: 1141 YPKMSESETLAESFLTSFPSINPLTAHGILSSESFLADFLEWPHESRLHAIKKYCIPDES 1200
YPKMSESETLAESFLTSFPSINPL AHGILSSES LADFLEWPHE RLHAI+KY IPD+
Sbjct: 1141 YPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDC 1200
Query: 1201 VALFSALCKYGEREDSKSVMTDCSSSVSSGPDSEKCYFKGNSERKRRNFTGGTQCIDKNM 1260
++LFSALCKYGEREDSKSVMTDCSSS+SSG DSEKC+F GNSERKRRNFTGG+QCI+KN
Sbjct: 1201 ISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGSQCIEKNT 1260
Query: 1261 DFLNSDTLNPFTAGTTETLAASKLFGSQMFEDPEIFCDLKGLSSSVNHFFDQNHNGESFD 1320
D L S+TLNPFTAGT ETL ASK FGSQ+FEDPEIFCDLKGLSSSVN+FFDQNHN SFD
Sbjct: 1261 DCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFD 1320
Query: 1321 ATIAMDPISVSKPCDSWISKAPEISDKIRKRCSSYVQNQGL--YKKKINNLHNMNKSEKQ 1380
AT++MDP V KP D WIS APEISD+IR+ CSS+VQNQGL KKKI+N HNMNKSE
Sbjct: 1321 ATVSMDPTRVCKPRDCWISTAPEISDEIRRHCSSFVQNQGLDRSKKKIHNFHNMNKSENH 1380
Query: 1381 HEELIGEVVNLIDTPVLKDDFATMTPMNFLPSMLDHEKDSSRKSKIQRRLSYGQSDSPLC 1440
HEELI EV NLID PVLKD FATM PMNFLPSML++E DSSRKSKIQRRLSYGQSD P C
Sbjct: 1381 HEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYGQSDHPFC 1440
Query: 1441 AVDIASNSSSDW--------QSSGGLDNHFPDRSFKPSIVPLRYKDGHSDEGLIQNSVRD 1500
AVD+ +NSSSD+ QSS GLDN FPD SF+PSI+PLRYKD H DEGL QN +RD
Sbjct: 1441 AVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLTQNPLRD 1500
Query: 1501 SKVLFSLSEKGTSHSDVTPLSIALRSKHLQDSSPWTMEFLNRIREKSRNRQHSVPRGSSS 1560
SKV FSLSEK TSHSDVTPLS+ALRSKHLQ+SSPWTMEFLNRIREKSRNRQHSVPRGSSS
Sbjct: 1501 SKVSFSLSEKHTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSS 1560
Query: 1561 PFPEHLDNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRQKQSMQSSNSSKNLLVPTSE 1620
PFPE+L NVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKR K S QSSNSSKN+LV T E
Sbjct: 1561 PFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATRE 1620
Query: 1621 LSSWTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKSSQKLGNK 1651
LSS TPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+SQKLGNK
Sbjct: 1621 LSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1667
BLAST of Tan0017993 vs. NCBI nr
Match:
XP_023554168.1 (protein SHORTAGE IN CHIASMATA 1 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2654.0 bits (6878), Expect = 0.0e+00
Identity = 1379/1671 (82.53%), Postives = 1474/1671 (88.21%), Query Frame = 0
Query: 1 MRTRFLDIDYFAPENESFHRLPVPHLASKPLFTVADLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FAP NESFHRLPVPHL S PL TV DLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPQRIDDENDYRSAGGQSSRFQGFTERNFSSESVETRFLEEEAKGTYEDNVEKG 120
+FFDDVLP+RI+D++ YR AG QSS F G ER FSS SV TR E+EAKGTYEDN+E
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSGSVGTRLREQEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFIKKDIGTDIRNRNLAYDMIQFETPQLDAFLENAFLFEKEEVQILTLA 180
WKNFGSETSE EFIKKDIGT+IRNRN + DMIQFETPQLDAFLENAFLFEKEEVQILT
Sbjct: 121 WKNFGSETSEMEFIKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEKEEVQILTGM 180
Query: 181 PEVEFNLETLNQGLLKYPSKVKESVYAVEHITSEYLLDQGSCLFEDD-AQDQKLLHRLTF 240
PEVEF+LETLNQGLLKYPS+VKES+Y VE I SEYLLDQ SCLFEDD AQDQKL H+ TF
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDAMVLETSAFFSLQDELFFILENTEPPHRIQDDNLLVNNEEYLCSMKCDVEEFLS 300
PFLEVD MVLET AF SLQDELFFILENTE H IQDDNLLVNNEEYL SM+CD EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHMIQDDNLLVNNEEYLSSMRCDAEEFLS 300
Query: 301 DHFLRPCALSELASPDISGG-SDLMSMIETLEIPVNS---TKSSCDLPVGPVIFEEFQLL 360
DHFLRPCA+SELASPDISGG SDLMSM+ETLEI V+S TKSSCDL V P IFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGLSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYMNQLFEVFFDLELSAASEISECMSIENTNFKSFNELIVCHELALVDDTFKSLPVPIL 420
D Y NQ F V DLE+SA SEI++C SIENTNFKSFNELIVCHEL LVDDTFKSLPVPIL
Sbjct: 361 DTYSNQHFGVILDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPIL 420
Query: 421 SSQGSERPLYAFIEDVLANLNGQSLSASDGIYLDWHLLEENSCSSGVYSSYQNMLEEINL 480
SSQGSE+PL AFIEDVLANLN QSLSASDGIYLDWHLL+E+S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEINL 480
Query: 481 KPVEFDQEPCENDSIFYRYVFSDDALVRERTEDKGELRESFPDGISMLPSQTIDVASSKL 540
KPVEFDQEPCEND IFYRYVFSDDALVRERTEDKGEL+ESFP+GI ML QTIDVASSKL
Sbjct: 481 KPVEFDQEPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSKL 540
Query: 541 LNDRCQQKGRQDLAAVGITEKALSSWKSKSESNDLNFFLNSQKPAGARKGEFLFSATDTN 600
LN+RCQQK RQ LAAVG +EKALSSWKSKSESNDL FFLNSQKPA RK E +FS DTN
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPARVRKSESVFSEIDTN 600
Query: 601 TMLPKVPCDGQLTSHPSMYSADVSLKQLNVALHQVCLSDNILHLINNSEKTYLAILQNEI 660
T LPKVP DG LT+ PSM SAD SLKQLNVA+HQVCLSDNILHLINNSEKTYLAILQNE
Sbjct: 601 TTLPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPYVAEDYFLMLSLPKQKLIDCIKKIYLQGASNYWEEKIMTLALLYATKQIAWY 720
ELRK YLPYVAEDY LMLSLPKQ LIDCIKKIYLQG + YWEEKIMTLA LYATKQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQMLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIYPAHLYLKKLCQSLDCLKSRLGFLVSLIEDARRMVDREITISHPALTTIQDILC 780
LCFYGI+PAHLYLKKLCQS +CLKSRLGFLVS IE+A +MV REITISHPALTTIQ+ILC
Sbjct: 721 LCFYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEILC 780
Query: 781 SKTSTSTLKVLVVANEIFWWSLKKLFGSMGLSFEELNYEGPTDQQVSNANIMVDDLASNC 840
S+TS S+LKVLVVAN+IFWWSLKKL GS+G+SF ELNY TD+QVSNAN MVDDLASNC
Sbjct: 781 SRTSISSLKVLVVANQIFWWSLKKLLGSLGISFAELNYGSLTDEQVSNANAMVDDLASNC 840
Query: 841 LLVSQEHISESFPFNKFSTILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKYGNCKA 900
LLVS+E+IS SFPFNKFS +LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDK GNCKA
Sbjct: 841 LLVSEEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA 900
Query: 901 FCEGVDLPQHNELTIEENSLVENQTRMLEKLLNFLPVDDKYILASPEATIEAEDCKVPLQ 960
FCEGVD PQHNELTIEE SLVENQT MLEKLLNFLPV++KYILASP+ TIEAE+ +V L+
Sbjct: 901 FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAENRRVSLR 960
Query: 961 VPVVP--DKSPHIDFLSFPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDL 1020
PVVP DKS H D +SFPEAI+IVNTQKFEKEMIV RRSSYQRILALEKEGVQVVERDL
Sbjct: 961 APVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDL 1020
Query: 1021 SLPVDLIITPGICLMWYDCTSIHMKASTPKEASSGLNLCIENIATDVLTSLSFAFSGCVL 1080
LPVDLII PGICL WYDCT+I K ST EAS LNLCIENIATDVLTSLSFAF GCVL
Sbjct: 1021 CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLSLNLCIENIATDVLTSLSFAFRGCVL 1080
Query: 1081 ----VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTNEIILGCIENVSKPM 1140
VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELT+EIILGCIENVSK M
Sbjct: 1081 ISFQVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLM 1140
Query: 1141 TGHLYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLADFLEWPHESRLHAIKKYCI 1200
T +YPKMSESETLAESFLTSFPSINPL AHGILSSES LADFLEWPHE RLHAI+KY I
Sbjct: 1141 TRRIYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSI 1200
Query: 1201 PDESVALFSALCKYGEREDSKSVMTDCSSSVSSGPDSEKCYFKGNSERKRRNFTGGTQCI 1260
PD+ ++LFSALCKYGEREDSKSVMTDCSSS+SSG DSEKC+F GNSERKRRNFTGG+QCI
Sbjct: 1201 PDDCISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGSQCI 1260
Query: 1261 DKNMDFLNSDTLNPFTAGTTETLAASKLFGSQMFEDPEIFCDLKGLSSSVNHFFDQNHNG 1320
+KN D L S+TLNPFTAGT ETL ASK FGSQ+FEDPEIFCDLKGLSSSVN+FFDQNHN
Sbjct: 1261 EKNTDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNL 1320
Query: 1321 ESFDATIAMDPISVSKPCDSWISKAPEISDKIRKRCSSYVQNQGL--YKKKINNLHNMNK 1380
SFDAT++MDP V KP D WIS APEISD+IR+ CSS+VQNQGL KKKI+N HNMNK
Sbjct: 1321 ASFDATVSMDPTRVCKPRDCWISTAPEISDEIRRHCSSFVQNQGLDRSKKKIHNFHNMNK 1380
Query: 1381 SEKQHEELIGEVVNLIDTPVLKDDFATMTPMNFLPSMLDHEKDSSRKSKIQRRLSYGQSD 1440
SE HEELI EV NLID PVLKD FATM PMNFLPSML++E DSSRKSKIQRRLSYGQSD
Sbjct: 1381 SENHHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYGQSD 1440
Query: 1441 SPLCAVDIASNSSSDW--------QSSGGLDNHFPDRSFKPSIVPLRYKDGHSDEGLIQN 1500
P CAVD+ +NSSSD+ QSS GLDN FPD SF+PSI+PLRYKD H DEGL QN
Sbjct: 1441 HPFCAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLTQN 1500
Query: 1501 SVRDSKVLFSLSEKGTSHSDVTPLSIALRSKHLQDSSPWTMEFLNRIREKSRNRQHSVPR 1560
+RDSKV FSLSEK TSHSDVTPLS+ALRSKHLQ+SSPWTMEFLNRIREKSRNRQHSVPR
Sbjct: 1501 PLRDSKVSFSLSEKHTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPR 1560
Query: 1561 GSSSPFPEHLDNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRQKQSMQSSNSSKNLLV 1620
GSSSPFPE+L NVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKR K S QSSNSSKN+LV
Sbjct: 1561 GSSSPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLV 1620
Query: 1621 PTSELSSWTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKSSQKLGNK 1651
T ELSS TPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+SQKLGNK
Sbjct: 1621 ATRELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1671
BLAST of Tan0017993 vs. ExPASy TrEMBL
Match:
A0A6J1I842 (protein SHORTAGE IN CHIASMATA 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470528 PE=4 SV=1)
HSP 1 Score: 2668.3 bits (6915), Expect = 0.0e+00
Identity = 1382/1667 (82.90%), Postives = 1479/1667 (88.72%), Query Frame = 0
Query: 1 MRTRFLDIDYFAPENESFHRLPVPHLASKPLFTVADLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FAP NESFHRLPVPHL S PL TV DLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPQRIDDENDYRSAGGQSSRFQGFTERNFSSESVETRFLEEEAKGTYEDNVEKG 120
+FFDDVLP+RI+D++ YR AG QSS F G ER FSSESV TR EEEAKGTYEDN+E
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFIKKDIGTDIRNRNLAYDMIQFETPQLDAFLENAFLFEKEEVQILTLA 180
WKNFGSETSE EF+KKDIGT+IRNRN + DMIQFETPQLDAFLENAFLFE+EEVQILT
Sbjct: 121 WKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAM 180
Query: 181 PEVEFNLETLNQGLLKYPSKVKESVYAVEHITSEYLLDQGSCLFEDD-AQDQKLLHRLTF 240
PEVEF+LETLNQGLLKYPS+VKES+Y VE I SEYLLDQ SCLFEDD AQDQKL H+ TF
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDAMVLETSAFFSLQDELFFILENTEPPHRIQDDNLLVNNEEYLCSMKCDVEEFLS 300
PFLEVD MVLET AF SLQDELFFILENTE HRIQDDNLLVNNEEYL M+CD EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLS 300
Query: 301 DHFLRPCALSELASPDISGG-SDLMSMIETLEIPVNS---TKSSCDLPVGPVIFEEFQLL 360
DHFLRPCA+SELASPDISGG SDLMSM+ETLEI V+S TKSSCDL V P IFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYMNQLFEVFFDLELSAASEISECMSIENTNFKSFNELIVCHELALVDDTFKSLPVPIL 420
D Y NQ F V FDLE+SA SEI++C SIENTNFKSFNELIVCHEL LVDD FKSLPVPIL
Sbjct: 361 DTYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPIL 420
Query: 421 SSQGSERPLYAFIEDVLANLNGQSLSASDGIYLDWHLLEENSCSSGVYSSYQNMLEEINL 480
SSQGSE+PL AFIEDVLANLN QSLSASDGIYLDWHLL+ +S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINL 480
Query: 481 KPVEFDQEPCENDSIFYRYVFSDDALVRERTEDKGELRESFPDGISMLPSQTIDVASSKL 540
KPVEFD+EPCEND IFYRYVFSDDALVRERTEDKGEL+ESFP+GI ML QTIDVAS KL
Sbjct: 481 KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKL 540
Query: 541 LNDRCQQKGRQDLAAVGITEKALSSWKSKSESNDLNFFLNSQKPAGARKGEFLFSATDTN 600
LN+RCQQK RQ LAAVG +EKALSSWKSKSESNDL FFLNSQKPAGARK E +FSA DTN
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTN 600
Query: 601 TMLPKVPCDGQLTSHPSMYSADVSLKQLNVALHQVCLSDNILHLINNSEKTYLAILQNEI 660
T LPKV DG LT+ PSM SAD SLKQLNVA+HQVCLSDNILHLINNSEKTYLAILQNE
Sbjct: 601 TTLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPYVAEDYFLMLSLPKQKLIDCIKKIYLQGASNYWEEKIMTLALLYATKQIAWY 720
ELRK YLPYVAEDY LMLSLPKQKLIDCIKKIYLQG + YWEEKIMTLA LYATKQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIYPAHLYLKKLCQSLDCLKSRLGFLVSLIEDARRMVDREITISHPALTTIQDILC 780
LCF+GI+PAHLYLKKLCQS +CLKSRLGFLVS IE+A +MVD+EITISHPALTTIQ+ILC
Sbjct: 721 LCFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILC 780
Query: 781 SKTSTSTLKVLVVANEIFWWSLKKLFGSMGLSFEELNYEGPTDQQVSNANIMVDDLASNC 840
S+TSTS+LKVLVVAN+IFWWSLK L GS+G+SF E+NY TD+QVSNAN MVDDLASNC
Sbjct: 781 SRTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASNC 840
Query: 841 LLVSQEHISESFPFNKFSTILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKYGNCKA 900
LLVSQE+IS SFPFNKFS +LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDK GNCKA
Sbjct: 841 LLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA 900
Query: 901 FCEGVDLPQHNELTIEENSLVENQTRMLEKLLNFLPVDDKYILASPEATIEAEDCKVPLQ 960
FCEGVD PQHNELTIEE SLVENQT MLEKLLNFLPV++KYILAS + TIEAE+ +VPL+
Sbjct: 901 FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPLR 960
Query: 961 VPVVP--DKSPHIDFLSFPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDL 1020
PVVP DKS H D +SFPEAI+IVNTQKFEKEMIV RRSSYQRILALEKEGVQVVERDL
Sbjct: 961 APVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDL 1020
Query: 1021 SLPVDLIITPGICLMWYDCTSIHMKASTPKEASSGLNLCIENIATDVLTSLSFAFSGCVL 1080
LPVDLII PGICL WYDCT+I K ST EAS LNLCIENIATDVLTSLSFAF GCVL
Sbjct: 1021 CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVL 1080
Query: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTNEIILGCIENVSKPMTGHL 1140
VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELT+EIILGCIENVSK MT +
Sbjct: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRI 1140
Query: 1141 YPKMSESETLAESFLTSFPSINPLTAHGILSSESFLADFLEWPHESRLHAIKKYCIPDES 1200
YPKMSESETLAESFLTSFPSINPL AHGILSSES LADFLEWPHE RLHAI+KY IPD+
Sbjct: 1141 YPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDC 1200
Query: 1201 VALFSALCKYGEREDSKSVMTDCSSSVSSGPDSEKCYFKGNSERKRRNFTGGTQCIDKNM 1260
++LFSALCKYGEREDSKSVMTDCSSS+SSG DSEKC+F GNSERKRRNFTGGTQCI+KN
Sbjct: 1201 ISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKNT 1260
Query: 1261 DFLNSDTLNPFTAGTTETLAASKLFGSQMFEDPEIFCDLKGLSSSVNHFFDQNHNGESFD 1320
D L S+TLNPFTAGT ETL ASK FGSQ+FEDPEIFCDLKGLSSSVN+FFDQNHN SFD
Sbjct: 1261 DCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFD 1320
Query: 1321 ATIAMDPISVSKPCDSWISKAPEISDKIRKRCSSYVQNQGL--YKKKINNLHNMNKSEKQ 1380
AT++MDP V KP D WIS APEISD+IR+RCSS+VQNQGL KKKI+N HNMNKSE
Sbjct: 1321 ATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMNKSENH 1380
Query: 1381 HEELIGEVVNLIDTPVLKDDFATMTPMNFLPSMLDHEKDSSRKSKIQRRLSYGQSDSPLC 1440
HEELI EV NLID PVLKD FATM PMNFLPSMLD+E DSSRKSKIQRRLSYGQSD P C
Sbjct: 1381 HEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQSDHPFC 1440
Query: 1441 AVDIASNSSSDW--------QSSGGLDNHFPDRSFKPSIVPLRYKDGHSDEGLIQNSVRD 1500
AVD+ +NSSSD+ QSS GLDN FPD SF+PSI+PLRYKD H DEGLIQN +RD
Sbjct: 1441 AVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQNPLRD 1500
Query: 1501 SKVLFSLSEKGTSHSDVTPLSIALRSKHLQDSSPWTMEFLNRIREKSRNRQHSVPRGSSS 1560
SKV FSLSEK TSHSDVTPLS+ALRSKHLQ+SSPWTMEFLNRIREKSRNRQHSVPRGSSS
Sbjct: 1501 SKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSS 1560
Query: 1561 PFPEHLDNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRQKQSMQSSNSSKNLLVPTSE 1620
PFPE+L NVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKR K S QSSNSSKN+LV T E
Sbjct: 1561 PFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATRE 1620
Query: 1621 LSSWTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKSSQKLGNK 1651
LSS TPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+SQKLGNK
Sbjct: 1621 LSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1667
BLAST of Tan0017993 vs. ExPASy TrEMBL
Match:
A0A6J1I320 (protein SHORTAGE IN CHIASMATA 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470528 PE=4 SV=1)
HSP 1 Score: 2662.5 bits (6900), Expect = 0.0e+00
Identity = 1382/1671 (82.70%), Postives = 1479/1671 (88.51%), Query Frame = 0
Query: 1 MRTRFLDIDYFAPENESFHRLPVPHLASKPLFTVADLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FAP NESFHRLPVPHL S PL TV DLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPQRIDDENDYRSAGGQSSRFQGFTERNFSSESVETRFLEEEAKGTYEDNVEKG 120
+FFDDVLP+RI+D++ YR AG QSS F G ER FSSESV TR EEEAKGTYEDN+E
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFIKKDIGTDIRNRNLAYDMIQFETPQLDAFLENAFLFEKEEVQILTLA 180
WKNFGSETSE EF+KKDIGT+IRNRN + DMIQFETPQLDAFLENAFLFE+EEVQILT
Sbjct: 121 WKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAM 180
Query: 181 PEVEFNLETLNQGLLKYPSKVKESVYAVEHITSEYLLDQGSCLFEDD-AQDQKLLHRLTF 240
PEVEF+LETLNQGLLKYPS+VKES+Y VE I SEYLLDQ SCLFEDD AQDQKL H+ TF
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDAMVLETSAFFSLQDELFFILENTEPPHRIQDDNLLVNNEEYLCSMKCDVEEFLS 300
PFLEVD MVLET AF SLQDELFFILENTE HRIQDDNLLVNNEEYL M+CD EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLS 300
Query: 301 DHFLRPCALSELASPDISGG-SDLMSMIETLEIPVNS---TKSSCDLPVGPVIFEEFQLL 360
DHFLRPCA+SELASPDISGG SDLMSM+ETLEI V+S TKSSCDL V P IFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYMNQLFEVFFDLELSAASEISECMSIENTNFKSFNELIVCHELALVDDTFKSLPVPIL 420
D Y NQ F V FDLE+SA SEI++C SIENTNFKSFNELIVCHEL LVDD FKSLPVPIL
Sbjct: 361 DTYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPIL 420
Query: 421 SSQGSERPLYAFIEDVLANLNGQSLSASDGIYLDWHLLEENSCSSGVYSSYQNMLEEINL 480
SSQGSE+PL AFIEDVLANLN QSLSASDGIYLDWHLL+ +S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINL 480
Query: 481 KPVEFDQEPCENDSIFYRYVFSDDALVRERTEDKGELRESFPDGISMLPSQTIDVASSKL 540
KPVEFD+EPCEND IFYRYVFSDDALVRERTEDKGEL+ESFP+GI ML QTIDVAS KL
Sbjct: 481 KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKL 540
Query: 541 LNDRCQQKGRQDLAAVGITEKALSSWKSKSESNDLNFFLNSQKPAGARKGEFLFSATDTN 600
LN+RCQQK RQ LAAVG +EKALSSWKSKSESNDL FFLNSQKPAGARK E +FSA DTN
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTN 600
Query: 601 TMLPKVPCDGQLTSHPSMYSADVSLKQLNVALHQVCLSDNILHLINNSEKTYLAILQNEI 660
T LPKV DG LT+ PSM SAD SLKQLNVA+HQVCLSDNILHLINNSEKTYLAILQNE
Sbjct: 601 TTLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPYVAEDYFLMLSLPKQKLIDCIKKIYLQGASNYWEEKIMTLALLYATKQIAWY 720
ELRK YLPYVAEDY LMLSLPKQKLIDCIKKIYLQG + YWEEKIMTLA LYATKQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIYPAHLYLKKLCQSLDCLKSRLGFLVSLIEDARRMVDREITISHPALTTIQDILC 780
LCF+GI+PAHLYLKKLCQS +CLKSRLGFLVS IE+A +MVD+EITISHPALTTIQ+ILC
Sbjct: 721 LCFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILC 780
Query: 781 SKTSTSTLKVLVVANEIFWWSLKKLFGSMGLSFEELNYEGPTDQQVSNANIMVDDLASNC 840
S+TSTS+LKVLVVAN+IFWWSLK L GS+G+SF E+NY TD+QVSNAN MVDDLASNC
Sbjct: 781 SRTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASNC 840
Query: 841 LLVSQEHISESFPFNKFSTILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKYGNCKA 900
LLVSQE+IS SFPFNKFS +LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDK GNCKA
Sbjct: 841 LLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA 900
Query: 901 FCEGVDLPQHNELTIEENSLVENQTRMLEKLLNFLPVDDKYILASPEATIEAEDCKVPLQ 960
FCEGVD PQHNELTIEE SLVENQT MLEKLLNFLPV++KYILAS + TIEAE+ +VPL+
Sbjct: 901 FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPLR 960
Query: 961 VPVVP--DKSPHIDFLSFPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDL 1020
PVVP DKS H D +SFPEAI+IVNTQKFEKEMIV RRSSYQRILALEKEGVQVVERDL
Sbjct: 961 APVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDL 1020
Query: 1021 SLPVDLIITPGICLMWYDCTSIHMKASTPKEASSGLNLCIENIATDVLTSLSFAFSGCVL 1080
LPVDLII PGICL WYDCT+I K ST EAS LNLCIENIATDVLTSLSFAF GCVL
Sbjct: 1021 CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVL 1080
Query: 1081 ----VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTNEIILGCIENVSKPM 1140
VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELT+EIILGCIENVSK M
Sbjct: 1081 ISFQVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLM 1140
Query: 1141 TGHLYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLADFLEWPHESRLHAIKKYCI 1200
T +YPKMSESETLAESFLTSFPSINPL AHGILSSES LADFLEWPHE RLHAI+KY I
Sbjct: 1141 TRRIYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSI 1200
Query: 1201 PDESVALFSALCKYGEREDSKSVMTDCSSSVSSGPDSEKCYFKGNSERKRRNFTGGTQCI 1260
PD+ ++LFSALCKYGEREDSKSVMTDCSSS+SSG DSEKC+F GNSERKRRNFTGGTQCI
Sbjct: 1201 PDDCISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCI 1260
Query: 1261 DKNMDFLNSDTLNPFTAGTTETLAASKLFGSQMFEDPEIFCDLKGLSSSVNHFFDQNHNG 1320
+KN D L S+TLNPFTAGT ETL ASK FGSQ+FEDPEIFCDLKGLSSSVN+FFDQNHN
Sbjct: 1261 EKNTDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNL 1320
Query: 1321 ESFDATIAMDPISVSKPCDSWISKAPEISDKIRKRCSSYVQNQGL--YKKKINNLHNMNK 1380
SFDAT++MDP V KP D WIS APEISD+IR+RCSS+VQNQGL KKKI+N HNMNK
Sbjct: 1321 ASFDATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMNK 1380
Query: 1381 SEKQHEELIGEVVNLIDTPVLKDDFATMTPMNFLPSMLDHEKDSSRKSKIQRRLSYGQSD 1440
SE HEELI EV NLID PVLKD FATM PMNFLPSMLD+E DSSRKSKIQRRLSYGQSD
Sbjct: 1381 SENHHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQSD 1440
Query: 1441 SPLCAVDIASNSSSDW--------QSSGGLDNHFPDRSFKPSIVPLRYKDGHSDEGLIQN 1500
P CAVD+ +NSSSD+ QSS GLDN FPD SF+PSI+PLRYKD H DEGLIQN
Sbjct: 1441 HPFCAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQN 1500
Query: 1501 SVRDSKVLFSLSEKGTSHSDVTPLSIALRSKHLQDSSPWTMEFLNRIREKSRNRQHSVPR 1560
+RDSKV FSLSEK TSHSDVTPLS+ALRSKHLQ+SSPWTMEFLNRIREKSRNRQHSVPR
Sbjct: 1501 PLRDSKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPR 1560
Query: 1561 GSSSPFPEHLDNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRQKQSMQSSNSSKNLLV 1620
GSSSPFPE+L NVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKR K S QSSNSSKN+LV
Sbjct: 1561 GSSSPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLV 1620
Query: 1621 PTSELSSWTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKSSQKLGNK 1651
T ELSS TPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+SQKLGNK
Sbjct: 1621 ATRELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1671
BLAST of Tan0017993 vs. ExPASy TrEMBL
Match:
A0A6J1I9N8 (protein SHORTAGE IN CHIASMATA 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111470528 PE=4 SV=1)
HSP 1 Score: 2659.8 bits (6893), Expect = 0.0e+00
Identity = 1381/1667 (82.84%), Postives = 1477/1667 (88.60%), Query Frame = 0
Query: 1 MRTRFLDIDYFAPENESFHRLPVPHLASKPLFTVADLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FAP NESFHRLPVPHL S PL TV DLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPQRIDDENDYRSAGGQSSRFQGFTERNFSSESVETRFLEEEAKGTYEDNVEKG 120
+FFDDVLP+RI+D++ YR AG QSS F G ER FSSESV TR EEEAKGTYEDN+E
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFIKKDIGTDIRNRNLAYDMIQFETPQLDAFLENAFLFEKEEVQILTLA 180
WKNFGSETSE EF KDIGT+IRNRN + DMIQFETPQLDAFLENAFLFE+EEVQILT
Sbjct: 121 WKNFGSETSEMEF--KDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAM 180
Query: 181 PEVEFNLETLNQGLLKYPSKVKESVYAVEHITSEYLLDQGSCLFEDD-AQDQKLLHRLTF 240
PEVEF+LETLNQGLLKYPS+VKES+Y VE I SEYLLDQ SCLFEDD AQDQKL H+ TF
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDAMVLETSAFFSLQDELFFILENTEPPHRIQDDNLLVNNEEYLCSMKCDVEEFLS 300
PFLEVD MVLET AF SLQDELFFILENTE HRIQDDNLLVNNEEYL M+CD EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLS 300
Query: 301 DHFLRPCALSELASPDISGG-SDLMSMIETLEIPVNS---TKSSCDLPVGPVIFEEFQLL 360
DHFLRPCA+SELASPDISGG SDLMSM+ETLEI V+S TKSSCDL V P IFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYMNQLFEVFFDLELSAASEISECMSIENTNFKSFNELIVCHELALVDDTFKSLPVPIL 420
D Y NQ F V FDLE+SA SEI++C SIENTNFKSFNELIVCHEL LVDD FKSLPVPIL
Sbjct: 361 DTYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPIL 420
Query: 421 SSQGSERPLYAFIEDVLANLNGQSLSASDGIYLDWHLLEENSCSSGVYSSYQNMLEEINL 480
SSQGSE+PL AFIEDVLANLN QSLSASDGIYLDWHLL+ +S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINL 480
Query: 481 KPVEFDQEPCENDSIFYRYVFSDDALVRERTEDKGELRESFPDGISMLPSQTIDVASSKL 540
KPVEFD+EPCEND IFYRYVFSDDALVRERTEDKGEL+ESFP+GI ML QTIDVAS KL
Sbjct: 481 KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKL 540
Query: 541 LNDRCQQKGRQDLAAVGITEKALSSWKSKSESNDLNFFLNSQKPAGARKGEFLFSATDTN 600
LN+RCQQK RQ LAAVG +EKALSSWKSKSESNDL FFLNSQKPAGARK E +FSA DTN
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTN 600
Query: 601 TMLPKVPCDGQLTSHPSMYSADVSLKQLNVALHQVCLSDNILHLINNSEKTYLAILQNEI 660
T LPKV DG LT+ PSM SAD SLKQLNVA+HQVCLSDNILHLINNSEKTYLAILQNE
Sbjct: 601 TTLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPYVAEDYFLMLSLPKQKLIDCIKKIYLQGASNYWEEKIMTLALLYATKQIAWY 720
ELRK YLPYVAEDY LMLSLPKQKLIDCIKKIYLQG + YWEEKIMTLA LYATKQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIYPAHLYLKKLCQSLDCLKSRLGFLVSLIEDARRMVDREITISHPALTTIQDILC 780
LCF+GI+PAHLYLKKLCQS +CLKSRLGFLVS IE+A +MVD+EITISHPALTTIQ+ILC
Sbjct: 721 LCFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILC 780
Query: 781 SKTSTSTLKVLVVANEIFWWSLKKLFGSMGLSFEELNYEGPTDQQVSNANIMVDDLASNC 840
S+TSTS+LKVLVVAN+IFWWSLK L GS+G+SF E+NY TD+QVSNAN MVDDLASNC
Sbjct: 781 SRTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASNC 840
Query: 841 LLVSQEHISESFPFNKFSTILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKYGNCKA 900
LLVSQE+IS SFPFNKFS +LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDK GNCKA
Sbjct: 841 LLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA 900
Query: 901 FCEGVDLPQHNELTIEENSLVENQTRMLEKLLNFLPVDDKYILASPEATIEAEDCKVPLQ 960
FCEGVD PQHNELTIEE SLVENQT MLEKLLNFLPV++KYILAS + TIEAE+ +VPL+
Sbjct: 901 FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPLR 960
Query: 961 VPVVP--DKSPHIDFLSFPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDL 1020
PVVP DKS H D +SFPEAI+IVNTQKFEKEMIV RRSSYQRILALEKEGVQVVERDL
Sbjct: 961 APVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDL 1020
Query: 1021 SLPVDLIITPGICLMWYDCTSIHMKASTPKEASSGLNLCIENIATDVLTSLSFAFSGCVL 1080
LPVDLII PGICL WYDCT+I K ST EAS LNLCIENIATDVLTSLSFAF GCVL
Sbjct: 1021 CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVL 1080
Query: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTNEIILGCIENVSKPMTGHL 1140
VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELT+EIILGCIENVSK MT +
Sbjct: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRI 1140
Query: 1141 YPKMSESETLAESFLTSFPSINPLTAHGILSSESFLADFLEWPHESRLHAIKKYCIPDES 1200
YPKMSESETLAESFLTSFPSINPL AHGILSSES LADFLEWPHE RLHAI+KY IPD+
Sbjct: 1141 YPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDC 1200
Query: 1201 VALFSALCKYGEREDSKSVMTDCSSSVSSGPDSEKCYFKGNSERKRRNFTGGTQCIDKNM 1260
++LFSALCKYGEREDSKSVMTDCSSS+SSG DSEKC+F GNSERKRRNFTGGTQCI+KN
Sbjct: 1201 ISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKNT 1260
Query: 1261 DFLNSDTLNPFTAGTTETLAASKLFGSQMFEDPEIFCDLKGLSSSVNHFFDQNHNGESFD 1320
D L S+TLNPFTAGT ETL ASK FGSQ+FEDPEIFCDLKGLSSSVN+FFDQNHN SFD
Sbjct: 1261 DCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFD 1320
Query: 1321 ATIAMDPISVSKPCDSWISKAPEISDKIRKRCSSYVQNQGL--YKKKINNLHNMNKSEKQ 1380
AT++MDP V KP D WIS APEISD+IR+RCSS+VQNQGL KKKI+N HNMNKSE
Sbjct: 1321 ATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMNKSENH 1380
Query: 1381 HEELIGEVVNLIDTPVLKDDFATMTPMNFLPSMLDHEKDSSRKSKIQRRLSYGQSDSPLC 1440
HEELI EV NLID PVLKD FATM PMNFLPSMLD+E DSSRKSKIQRRLSYGQSD P C
Sbjct: 1381 HEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQSDHPFC 1440
Query: 1441 AVDIASNSSSDW--------QSSGGLDNHFPDRSFKPSIVPLRYKDGHSDEGLIQNSVRD 1500
AVD+ +NSSSD+ QSS GLDN FPD SF+PSI+PLRYKD H DEGLIQN +RD
Sbjct: 1441 AVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQNPLRD 1500
Query: 1501 SKVLFSLSEKGTSHSDVTPLSIALRSKHLQDSSPWTMEFLNRIREKSRNRQHSVPRGSSS 1560
SKV FSLSEK TSHSDVTPLS+ALRSKHLQ+SSPWTMEFLNRIREKSRNRQHSVPRGSSS
Sbjct: 1501 SKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSS 1560
Query: 1561 PFPEHLDNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRQKQSMQSSNSSKNLLVPTSE 1620
PFPE+L NVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKR K S QSSNSSKN+LV T E
Sbjct: 1561 PFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATRE 1620
Query: 1621 LSSWTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKSSQKLGNK 1651
LSS TPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+SQKLGNK
Sbjct: 1621 LSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1665
BLAST of Tan0017993 vs. ExPASy TrEMBL
Match:
A0A6J1GJP5 (protein SHORTAGE IN CHIASMATA 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454972 PE=4 SV=1)
HSP 1 Score: 2643.2 bits (6850), Expect = 0.0e+00
Identity = 1370/1667 (82.18%), Postives = 1469/1667 (88.12%), Query Frame = 0
Query: 1 MRTRFLDIDYFAPENESFHRLPVPHLASKPLFTVADLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FAP NESFHRLPVPHL S PL TV DLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPQRIDDENDYRSAGGQSSRFQGFTERNFSSESVETRFLEEEAKGTYEDNVEKG 120
+FFDDVLP+RI D++ YR AG QSS F G ER FSSESV TR EEEAKGTYEDN+E
Sbjct: 61 RFFDDVLPRRIVDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFIKKDIGTDIRNRNLAYDMIQFETPQLDAFLENAFLFEKEEVQILTLA 180
WKNFGSETSE EF+KKDIGT+IRNRN + DMIQFETPQLD FLENAFLFEKEEVQILT
Sbjct: 121 WKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDTFLENAFLFEKEEVQILTAM 180
Query: 181 PEVEFNLETLNQGLLKYPSKVKESVYAVEHITSEYLLDQGSCLFEDD-AQDQKLLHRLTF 240
PEVEF+LETLNQGLLKYPS+VKES+Y VE I SEYLLDQ SCLFEDD AQDQKL H+ TF
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDAMVLETSAFFSLQDELFFILENTEPPHRIQDDNLLVNNEEYLCSMKCDVEEFLS 300
PFLEVD MVLET AF SLQDELFFILE+TE H I DDNLLVNNEEYL SM+CD EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILESTESAHMIHDDNLLVNNEEYLSSMRCDAEEFLS 300
Query: 301 DHFLRPCALSELASPDISGG-SDLMSMIETLEIPVNS---TKSSCDLPVGPVIFEEFQLL 360
DHFLRPC +SELASPDISGG SDLMSM+ETLEI V+S TKSSCDL V P IFEEFQLL
Sbjct: 301 DHFLRPCGVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYMNQLFEVFFDLELSAASEISECMSIENTNFKSFNELIVCHELALVDDTFKSLPVPIL 420
D Y NQ F FDLE+SA SEI++C SIENTNFKSFNELIVCHEL LVDDTFKSLPVPIL
Sbjct: 361 DTYSNQHFGAIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPIL 420
Query: 421 SSQGSERPLYAFIEDVLANLNGQSLSASDGIYLDWHLLEENSCSSGVYSSYQNMLEEINL 480
SSQGSE+ L AFIEDVLANLN QSLSASDGIYLDWHLL+E+S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKLLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEINL 480
Query: 481 KPVEFDQEPCENDSIFYRYVFSDDALVRERTEDKGELRESFPDGISMLPSQTIDVASSKL 540
KPVEFD+EPCEND IFYRYVFSDDALVRERTEDKGEL+ESFP+GI ML QTIDVASS L
Sbjct: 481 KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSIL 540
Query: 541 LNDRCQQKGRQDLAAVGITEKALSSWKSKSESNDLNFFLNSQKPAGARKGEFLFSATDTN 600
LN+RCQQK RQ LAAVG +EKALSSWKSKSESNDL FFLNSQKP G RK E +FS DTN
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPVGVRKSESVFSEIDTN 600
Query: 601 TMLPKVPCDGQLTSHPSMYSADVSLKQLNVALHQVCLSDNILHLINNSEKTYLAILQNEI 660
T LPKVP DG LT+ PSM SAD SLKQLNVA+HQVCLSDNILHLINNSEKTYLAILQNE
Sbjct: 601 TTLPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPYVAEDYFLMLSLPKQKLIDCIKKIYLQGASNYWEEKIMTLALLYATKQIAWY 720
ELRK YLPYVAEDY LMLSLPKQKLIDCIKKIYLQG + YWEEKIMTLA LYATKQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIYPAHLYLKKLCQSLDCLKSRLGFLVSLIEDARRMVDREITISHPALTTIQDILC 780
LCFYGI+PAHLYLKKLCQS +CLKSRLGFLVS IE+A +MV REITISHPALTTIQ+ILC
Sbjct: 721 LCFYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEILC 780
Query: 781 SKTSTSTLKVLVVANEIFWWSLKKLFGSMGLSFEELNYEGPTDQQVSNANIMVDDLASNC 840
S+TSTS+LKVLVVAN+IFWWSL+KL GS+G+SF E+NY T +QVSNAN MVDDLASNC
Sbjct: 781 SRTSTSSLKVLVVANQIFWWSLEKLLGSLGISFAEINYGSLTVEQVSNANAMVDDLASNC 840
Query: 841 LLVSQEHISESFPFNKFSTILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKYGNCKA 900
LLVSQE+IS SFPFNKFS +LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDK GNCKA
Sbjct: 841 LLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA 900
Query: 901 FCEGVDLPQHNELTIEENSLVENQTRMLEKLLNFLPVDDKYILASPEATIEAEDCKVPLQ 960
FCEGVD PQHNELTIEE SLVENQT MLEKLLNFLPV++KYILASP+ TIEAE+ +VPL+
Sbjct: 901 FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAENRRVPLR 960
Query: 961 VPVVP--DKSPHIDFLSFPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDL 1020
PV P DKS + D +SFPEAI+IVNTQKFEKEMIV RRSSY+RILALEKEGVQVVERDL
Sbjct: 961 APVEPVSDKSQYTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYRRILALEKEGVQVVERDL 1020
Query: 1021 SLPVDLIITPGICLMWYDCTSIHMKASTPKEASSGLNLCIENIATDVLTSLSFAFSGCVL 1080
LPVDLII PGICL WYDCT+I K ST EAS LNLCIENIATDVLTSLSFAF GCVL
Sbjct: 1021 CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVL 1080
Query: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTNEIILGCIENVSKPMTGHL 1140
VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELT+EIILGCIENVSK MT +
Sbjct: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRI 1140
Query: 1141 YPKMSESETLAESFLTSFPSINPLTAHGILSSESFLADFLEWPHESRLHAIKKYCIPDES 1200
YPKMSESETLAESFLTSFPSINPL AHGILSSES LADFLEWPHE RLHAI+KY IPD+
Sbjct: 1141 YPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDC 1200
Query: 1201 VALFSALCKYGEREDSKSVMTDCSSSVSSGPDSEKCYFKGNSERKRRNFTGGTQCIDKNM 1260
++LFSALCKYGEREDSKSVMTDCSSS+SSG DSEKC+F GNSERKRRNFTGGTQCI+KN
Sbjct: 1201 ISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKNT 1260
Query: 1261 DFLNSDTLNPFTAGTTETLAASKLFGSQMFEDPEIFCDLKGLSSSVNHFFDQNHNGESFD 1320
D L S+TLNPFTAGT ETL ASK FGSQ+FEDPEIFCDLKGLSSSVN+FFDQNHN SFD
Sbjct: 1261 DCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFD 1320
Query: 1321 ATIAMDPISVSKPCDSWISKAPEISDKIRKRCSSYVQNQGL--YKKKINNLHNMNKSEKQ 1380
AT++MDP V KP D WIS APEISD+IR+ CS +VQNQGL KKKI++ HNMNKSE
Sbjct: 1321 ATVSMDPTRVCKPRDCWISTAPEISDEIRRHCSPFVQNQGLDRSKKKIHSFHNMNKSENH 1380
Query: 1381 HEELIGEVVNLIDTPVLKDDFATMTPMNFLPSMLDHEKDSSRKSKIQRRLSYGQSDSPLC 1440
HEELI EV NLID PVLKD FATM PMNFLPSML++E DSSRKSKIQRRLSYGQSD P C
Sbjct: 1381 HEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYGQSDHPFC 1440
Query: 1441 AVDIASNSSSDW--------QSSGGLDNHFPDRSFKPSIVPLRYKDGHSDEGLIQNSVRD 1500
AVD+ +NSSSD+ QSS GLDN FPD SF+PSI+PLRYKD H DEGL QN +RD
Sbjct: 1441 AVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLTQNHLRD 1500
Query: 1501 SKVLFSLSEKGTSHSDVTPLSIALRSKHLQDSSPWTMEFLNRIREKSRNRQHSVPRGSSS 1560
SKV FSLSEK TSHSDVTPLS+ALRSKHLQ+SSPWTMEFLNRIREKSRNRQHSVPRGSSS
Sbjct: 1501 SKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSS 1560
Query: 1561 PFPEHLDNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRQKQSMQSSNSSKNLLVPTSE 1620
PFPE+L NVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKR K S QSSNSSKN+LV T E
Sbjct: 1561 PFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATRE 1620
Query: 1621 LSSWTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKSSQKLGNK 1651
LSS TPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+SQKLGNK
Sbjct: 1621 LSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1667
BLAST of Tan0017993 vs. ExPASy TrEMBL
Match:
A0A6J1GL72 (protein SHORTAGE IN CHIASMATA 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454972 PE=4 SV=1)
HSP 1 Score: 2637.4 bits (6835), Expect = 0.0e+00
Identity = 1370/1671 (81.99%), Postives = 1469/1671 (87.91%), Query Frame = 0
Query: 1 MRTRFLDIDYFAPENESFHRLPVPHLASKPLFTVADLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FAP NESFHRLPVPHL S PL TV DLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPQRIDDENDYRSAGGQSSRFQGFTERNFSSESVETRFLEEEAKGTYEDNVEKG 120
+FFDDVLP+RI D++ YR AG QSS F G ER FSSESV TR EEEAKGTYEDN+E
Sbjct: 61 RFFDDVLPRRIVDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFIKKDIGTDIRNRNLAYDMIQFETPQLDAFLENAFLFEKEEVQILTLA 180
WKNFGSETSE EF+KKDIGT+IRNRN + DMIQFETPQLD FLENAFLFEKEEVQILT
Sbjct: 121 WKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDTFLENAFLFEKEEVQILTAM 180
Query: 181 PEVEFNLETLNQGLLKYPSKVKESVYAVEHITSEYLLDQGSCLFEDD-AQDQKLLHRLTF 240
PEVEF+LETLNQGLLKYPS+VKES+Y VE I SEYLLDQ SCLFEDD AQDQKL H+ TF
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDAMVLETSAFFSLQDELFFILENTEPPHRIQDDNLLVNNEEYLCSMKCDVEEFLS 300
PFLEVD MVLET AF SLQDELFFILE+TE H I DDNLLVNNEEYL SM+CD EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILESTESAHMIHDDNLLVNNEEYLSSMRCDAEEFLS 300
Query: 301 DHFLRPCALSELASPDISGG-SDLMSMIETLEIPVNS---TKSSCDLPVGPVIFEEFQLL 360
DHFLRPC +SELASPDISGG SDLMSM+ETLEI V+S TKSSCDL V P IFEEFQLL
Sbjct: 301 DHFLRPCGVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYMNQLFEVFFDLELSAASEISECMSIENTNFKSFNELIVCHELALVDDTFKSLPVPIL 420
D Y NQ F FDLE+SA SEI++C SIENTNFKSFNELIVCHEL LVDDTFKSLPVPIL
Sbjct: 361 DTYSNQHFGAIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPIL 420
Query: 421 SSQGSERPLYAFIEDVLANLNGQSLSASDGIYLDWHLLEENSCSSGVYSSYQNMLEEINL 480
SSQGSE+ L AFIEDVLANLN QSLSASDGIYLDWHLL+E+S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKLLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEINL 480
Query: 481 KPVEFDQEPCENDSIFYRYVFSDDALVRERTEDKGELRESFPDGISMLPSQTIDVASSKL 540
KPVEFD+EPCEND IFYRYVFSDDALVRERTEDKGEL+ESFP+GI ML QTIDVASS L
Sbjct: 481 KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSIL 540
Query: 541 LNDRCQQKGRQDLAAVGITEKALSSWKSKSESNDLNFFLNSQKPAGARKGEFLFSATDTN 600
LN+RCQQK RQ LAAVG +EKALSSWKSKSESNDL FFLNSQKP G RK E +FS DTN
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPVGVRKSESVFSEIDTN 600
Query: 601 TMLPKVPCDGQLTSHPSMYSADVSLKQLNVALHQVCLSDNILHLINNSEKTYLAILQNEI 660
T LPKVP DG LT+ PSM SAD SLKQLNVA+HQVCLSDNILHLINNSEKTYLAILQNE
Sbjct: 601 TTLPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPYVAEDYFLMLSLPKQKLIDCIKKIYLQGASNYWEEKIMTLALLYATKQIAWY 720
ELRK YLPYVAEDY LMLSLPKQKLIDCIKKIYLQG + YWEEKIMTLA LYATKQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIYPAHLYLKKLCQSLDCLKSRLGFLVSLIEDARRMVDREITISHPALTTIQDILC 780
LCFYGI+PAHLYLKKLCQS +CLKSRLGFLVS IE+A +MV REITISHPALTTIQ+ILC
Sbjct: 721 LCFYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEILC 780
Query: 781 SKTSTSTLKVLVVANEIFWWSLKKLFGSMGLSFEELNYEGPTDQQVSNANIMVDDLASNC 840
S+TSTS+LKVLVVAN+IFWWSL+KL GS+G+SF E+NY T +QVSNAN MVDDLASNC
Sbjct: 781 SRTSTSSLKVLVVANQIFWWSLEKLLGSLGISFAEINYGSLTVEQVSNANAMVDDLASNC 840
Query: 841 LLVSQEHISESFPFNKFSTILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKYGNCKA 900
LLVSQE+IS SFPFNKFS +LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDK GNCKA
Sbjct: 841 LLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA 900
Query: 901 FCEGVDLPQHNELTIEENSLVENQTRMLEKLLNFLPVDDKYILASPEATIEAEDCKVPLQ 960
FCEGVD PQHNELTIEE SLVENQT MLEKLLNFLPV++KYILASP+ TIEAE+ +VPL+
Sbjct: 901 FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAENRRVPLR 960
Query: 961 VPVVP--DKSPHIDFLSFPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDL 1020
PV P DKS + D +SFPEAI+IVNTQKFEKEMIV RRSSY+RILALEKEGVQVVERDL
Sbjct: 961 APVEPVSDKSQYTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYRRILALEKEGVQVVERDL 1020
Query: 1021 SLPVDLIITPGICLMWYDCTSIHMKASTPKEASSGLNLCIENIATDVLTSLSFAFSGCVL 1080
LPVDLII PGICL WYDCT+I K ST EAS LNLCIENIATDVLTSLSFAF GCVL
Sbjct: 1021 CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVL 1080
Query: 1081 ----VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTNEIILGCIENVSKPM 1140
VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELT+EIILGCIENVSK M
Sbjct: 1081 ISFQVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLM 1140
Query: 1141 TGHLYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLADFLEWPHESRLHAIKKYCI 1200
T +YPKMSESETLAESFLTSFPSINPL AHGILSSES LADFLEWPHE RLHAI+KY I
Sbjct: 1141 TRRIYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSI 1200
Query: 1201 PDESVALFSALCKYGEREDSKSVMTDCSSSVSSGPDSEKCYFKGNSERKRRNFTGGTQCI 1260
PD+ ++LFSALCKYGEREDSKSVMTDCSSS+SSG DSEKC+F GNSERKRRNFTGGTQCI
Sbjct: 1201 PDDCISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCI 1260
Query: 1261 DKNMDFLNSDTLNPFTAGTTETLAASKLFGSQMFEDPEIFCDLKGLSSSVNHFFDQNHNG 1320
+KN D L S+TLNPFTAGT ETL ASK FGSQ+FEDPEIFCDLKGLSSSVN+FFDQNHN
Sbjct: 1261 EKNTDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNL 1320
Query: 1321 ESFDATIAMDPISVSKPCDSWISKAPEISDKIRKRCSSYVQNQGL--YKKKINNLHNMNK 1380
SFDAT++MDP V KP D WIS APEISD+IR+ CS +VQNQGL KKKI++ HNMNK
Sbjct: 1321 ASFDATVSMDPTRVCKPRDCWISTAPEISDEIRRHCSPFVQNQGLDRSKKKIHSFHNMNK 1380
Query: 1381 SEKQHEELIGEVVNLIDTPVLKDDFATMTPMNFLPSMLDHEKDSSRKSKIQRRLSYGQSD 1440
SE HEELI EV NLID PVLKD FATM PMNFLPSML++E DSSRKSKIQRRLSYGQSD
Sbjct: 1381 SENHHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYGQSD 1440
Query: 1441 SPLCAVDIASNSSSDW--------QSSGGLDNHFPDRSFKPSIVPLRYKDGHSDEGLIQN 1500
P CAVD+ +NSSSD+ QSS GLDN FPD SF+PSI+PLRYKD H DEGL QN
Sbjct: 1441 HPFCAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLTQN 1500
Query: 1501 SVRDSKVLFSLSEKGTSHSDVTPLSIALRSKHLQDSSPWTMEFLNRIREKSRNRQHSVPR 1560
+RDSKV FSLSEK TSHSDVTPLS+ALRSKHLQ+SSPWTMEFLNRIREKSRNRQHSVPR
Sbjct: 1501 HLRDSKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPR 1560
Query: 1561 GSSSPFPEHLDNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRQKQSMQSSNSSKNLLV 1620
GSSSPFPE+L NVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKR K S QSSNSSKN+LV
Sbjct: 1561 GSSSPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLV 1620
Query: 1621 PTSELSSWTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKSSQKLGNK 1651
T ELSS TPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+SQKLGNK
Sbjct: 1621 ATRELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1671
BLAST of Tan0017993 vs. TAIR 10
Match:
AT5G52290.1 (shortage in chiasmata 1 )
HSP 1 Score: 808.5 bits (2087), Expect = 9.8e-234
Identity = 615/1702 (36.13%), Postives = 906/1702 (53.23%), Query Frame = 0
Query: 1 MRTRFLDIDYFAP------ENESFHRLPVPHLASKPLF--TVADLLHFDFVPEISLGIDR 60
MRTRFL+IDYF+ E F LP P P+ D L F + +S+ I
Sbjct: 1 MRTRFLNIDYFSTPPSHVFETLGFLNLPAPDNFPAPIVYNGEEDRLRFGSIENVSIPIGN 60
Query: 61 LTIDSALSKFFDDVLPQRIDDENDYRSAGGQSSRFQGFTERNFSSESVETRFLEEEAKGT 120
L I++ALSKF DV+P R+ DYR F+ +++ + G
Sbjct: 61 LPIEAALSKFLSDVVPDRV--SVDYRV-------FE----------------IDDSSLGV 120
Query: 121 YEDNVEKGWKNFGSETSETEFIKKDIGTDIRNRNLAYDMIQFETPQLDAFLENAFLFEKE 180
Y + +KD G I ++ +I+ ETP+LD +EN L E
Sbjct: 121 YYSD------------------EKDDGDAIADK-ATPKIIELETPELDFEMENKLLCTSE 180
Query: 181 E-VQILTLAPEVEFNLETLNQG---LLKYPSKVKESVYAVEHITSEYLLDQGSCLFEDDA 240
+ +Q + E++ N +G +L+ ++E +Y+V++I S+Y + + + E++
Sbjct: 181 DHLQCFSEVLEIK-NDPVKYEGSDIILQNSKDIQEQIYSVDYIPSDYFTENNTSVAENEC 240
Query: 241 --QDQKLLHRLTFPFLEVDAMVLETSAFFSLQDELFFILENTEPPHRIQDDNLLVNNEEY 300
+ Q FP LEVD + L + S+ D++F +LE EP +L++N++E
Sbjct: 241 FRKIQPWFKDARFPLLEVDEVNLSELSSLSVLDKVFTVLETIEPQDTNAGSSLIINSKEL 300
Query: 301 LCSMKCDVEEFLS-DHFLRPCALSELASPDISGGSDLMSMIETLEIPVNSTKSSCDLPVG 360
+ S D+ + LS D +L S++ D D+++++E +++ +
Sbjct: 301 IGSKDYDLLDVLSTDCYLNKSGQSDVVPEDEFSEMDIVTILE-----ISNAEEFQGKVAV 360
Query: 361 PVIFEEFQLLDIYMNQLFEVFFDLELSAASEISECMSIENTNFKSFNELIVCHELALVDD 420
PV +EEFQ+LD+ ++ +F++F L+ + EI M + NFK F+EL+V ELA DD
Sbjct: 361 PVTYEEFQILDVDISDVFDIFLCLQKAIEPEICYGMFSKEMNFKDFDELVVSSELAFTDD 420
Query: 421 TFKSLPVPILSSQGSERPLYAFIEDVLANLNGQSLSASDGIYLDWHLLEENSCSSGVYSS 480
FKSLP PIL R L EDVL+ + QSLSAS+ IYL W+LLEE + + Y
Sbjct: 421 AFKSLPTPILHDYEMTRSLELIYEDVLSKIKPQSLSASNDIYLPWNLLEERNHNHCDYP- 480
Query: 481 YQNMLEEINLKPVEFDQEPCENDSIFYRYVFSDDALVRERTEDKGELRESFPDGISMLPS 540
EEI ++++ E E D Y ++FS+DA E + E F GIS L
Sbjct: 481 ----FEEIVTFNIDYNWEASEGDKWVYDFIFSEDAFCEPLVE---KCTEPF-YGISNLDE 540
Query: 541 QTIDVASSKLLNDRCQQKGRQDLAAVGITEKALSSWKSKSESNDLNFFLNSQKPAGARKG 600
S LL + Q+ G +D A +KA +KS S +DL FF++ +K
Sbjct: 541 HAPVNTSHGLLENPFQKTGARDCAVDDNAKKATLLFKSMSAFDDLTFFMDPKKAVIEDNL 600
Query: 601 EF-LFSATDTNTMLPKVPCDGQLTS---HPSMYSADVSLKQLNVALHQVCLSDNILHLIN 660
E + +A TN + S HP+ K + LH V S+NI L+
Sbjct: 601 ESRVEAAKTTNHKCMSIDSKASCRSGGMHPNP-------KTEEMILHSVRPSENIQALVG 660
Query: 661 NSEKTYLAILQNEIELRKTYLPYVAEDYFLMLSLPKQKLIDCIKKIYLQGASNYWEEKIM 720
K+YL ++++E E ++ED +LS+ K KLIDCI+K + + ++K
Sbjct: 661 EFVKSYLTLVKDESE-------NLSEDKLKLLSISKGKLIDCIRKANVH-KTQLADDKTF 720
Query: 721 TLALLYATKQIAWYLCFYGIYPAHLYLKKLCQSLDCLKSRLGFLVSLIEDARRMVDREIT 780
T ALL A KQ+ WY+CF+GI+ A++YL K+C+S + +K L L S +E + + +IT
Sbjct: 721 TFALLLAIKQMTWYMCFFGIHVAYIYLNKVCRSSNPMKIGLHTLYSAVETEHKSDETDIT 780
Query: 781 ISHPALTTIQDILCSKTSTSTLKVLVVANEIFWWSLKKLFGSMGLSFEELNYEGPTDQQ- 840
SHP+L IQ IL S+ + K L++A ++FW SLK+L SMGLS+ +LN P+ +
Sbjct: 781 RSHPSLAVIQGILQSEFARGNSKALLLAEKVFWSSLKRLLMSMGLSYNDLNSPSPSGNRP 840
Query: 841 -VSNANIMVDDLASNCLLVSQEHISESFPFNKFSTILEYGGLNGSSQISTYFSKLINMPH 900
V A + S+CL++S E IS SFP FS I+EYGG N S + S + SKL + P
Sbjct: 841 NVHEAIELGFLPISDCLIISYEQISPSFPVENFSVIVEYGGPNASPRYS-FPSKLDSFPS 900
Query: 901 LHFVMLELDKYGNCKAFCEGVDLPQHNELTIEENSLVENQTRMLEKLLNFLPVDDKYILA 960
HF+ +ELD C C GV +P L + + VE +T LE++LNF+P++
Sbjct: 901 FHFIKVELDMPSACGQLCAGVTVPY--SLKMIKGDEVETKTGWLEEVLNFVPLEKVCYAG 960
Query: 961 SPEATIEAEDCKVPLQVPVVPDKSPHI--DFLSFPEAIVIVNTQKFEKEMIVSRRSSYQR 1020
S E T E+E +P + ++ I LS ++++VNT+ +KEMI+SRRS+YQ+
Sbjct: 961 SSETTNESEFISMPQE----SERKRGIIEQGLSDQRSVIVVNTKTVDKEMIISRRSTYQK 1020
Query: 1021 ILALEKEGVQVVERDLSLPVDLIITPGICLMWYDCTSIHMKASTPKEASSGLNLCIENIA 1080
+LA+EKEGVQVVERD LPVDL+++P +CL+WYD ++ K++ SS I +IA
Sbjct: 1021 VLAMEKEGVQVVERDSDLPVDLMLSPAVCLLWYDSETVSKKSAATIGTSSSSLSWIGDIA 1080
Query: 1081 TDVLTSLSFAFSGCVLVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTNEI 1140
T+VLTSLSF+FS C++VFEGE + L+ VM+SSD LYAAA SL I Q+FCS S+ LT+EI
Sbjct: 1081 TNVLTSLSFSFSTCIMVFEGEPAFLAAVMDSSDELYAAAGSLGISLQMFCSSSANLTDEI 1140
Query: 1141 ILGCIENVSKPMTGHLYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLADFLEWPH 1200
IL CI++ K L+ KM ESE+LAESFLT FPS+NPLTA ILSS L +F++ PH
Sbjct: 1141 ILKCIKSSVK--LSKLHVKMPESESLAESFLTKFPSVNPLTAQVILSSSGSLLEFMKLPH 1200
Query: 1201 ESRLHAIKKYCIPDESVALFSALCKYGEREDSKSVMTDCSSSVSSGPDSEKCYFKGNSER 1260
+S++ +KY +P+ESV LFS++C+YG REDS+SVMTD SSSVSSGPDS+ + +S
Sbjct: 1201 KSKVERTQKYHVPEESVDLFSSVCRYGAREDSRSVMTDSSSSVSSGPDSDTHHVSVHSGS 1260
Query: 1261 KRRNFTGGTQCIDKNMDFLNSDTLNPFTAGTTETLAASKLFGSQMFEDPEIFCDLKGLSS 1320
K++ + ID + D ++ F ++ +L S +D EIF
Sbjct: 1261 KKKQYIAEKDEIDMD-DLVHFSPSIEFADTQLKSSGDFQLDDSWSSKDHEIF-------- 1320
Query: 1321 SVNHFFDQNHNGESFDATIAMDPISVSKPCDSWISKAPEISDKIRKRCSS---------- 1380
HF + E DA P +S P DSW SK PE DK SS
Sbjct: 1321 ---HF---DPVTEFSDA--PFKPSGISHPNDSWPSKDPERFDKKSGPGSSSKDTFWEKDQ 1380
Query: 1381 --------------------------YVQNQGLYKKKIN--NLHNMNKSEKQHEELIGEV 1440
QN+G + NLH+ SE + GEV
Sbjct: 1381 PDFSVEDSLPGIPELEDWSFPVKDKFMSQNRGCKFPVMRDFNLHDNRNSENFIADYKGEV 1440
Query: 1441 VNLIDTPVLKDDFATMTPMNFLPSMLD--HEKDSSRKSKIQRRLSYGQSDSPLC--AVDI 1500
++ D L++DF N ++ +E++ RKSK R+LS+ S P A DI
Sbjct: 1441 IDRAD-KYLEEDFPPSPGYNRFARIVSDVNEEELPRKSKSSRKLSFFGSLQPNFPKAADI 1500
Query: 1501 ASNSSS-DWQSSGGLDNHFPDRSFKPSIVPLRYKDGHSDEGLIQNSVRDSKVLFSLSEKG 1560
S+S + DN+ R + + R + + +++V +++ F +
Sbjct: 1501 DSSSERYATEKDSKYDNNTSLRGYADNYPAKRQRTLLEEVLTRRSAVPTTELPF---REE 1560
Query: 1561 TSHSDVTPLSIALRSKHLQDSSPWTMEFLNRIREKSRNR--QHSVPRGSSSPFPEHLDNV 1620
SH +PLS A+RS + SSPWT++FLNR+RE+SR R Q S+P +S P E N+
Sbjct: 1561 ISHFGGSPLSNAIRSSNQVQSSPWTVDFLNRVRERSRARKQQQSLPSYASPPSLETPGNI 1593
Query: 1621 KK-TVKRRSPSILEFFKYQGGSTLRKKPEQKRQKQSMQSSNSSKNLLVPTSELSSWTPID 1634
KK KR+SPSILEFFKY+GG+ L+ E+KRQK+S SS S KN S L S TPID
Sbjct: 1621 KKANTKRKSPSILEFFKYKGGNKLQ---EEKRQKRSKNSSASPKNERF-YSPLKSCTPID 1593
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
F4KG50 | 1.4e-232 | 36.13 | Protein SHORTAGE IN CHIASMATA 1 OS=Arabidopsis thaliana OX=3702 GN=SHOC1 PE=1 SV... | [more] |
B9F1C0 | 1.3e-145 | 28.96 | Protein SHORTAGE IN CHIASMATA 1 homolog OS=Oryza sativa subsp. japonica OX=39947... | [more] |
Match Name | E-value | Identity | Description | |
XP_022971833.1 | 0.0e+00 | 82.90 | protein SHORTAGE IN CHIASMATA 1 isoform X2 [Cucurbita maxima] | [more] |
XP_022971832.1 | 0.0e+00 | 82.70 | protein SHORTAGE IN CHIASMATA 1 isoform X1 [Cucurbita maxima] | [more] |
XP_022971834.1 | 0.0e+00 | 82.84 | protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita maxima] | [more] |
XP_023554171.1 | 0.0e+00 | 82.72 | protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita pepo subsp. pepo] | [more] |
XP_023554168.1 | 0.0e+00 | 82.53 | protein SHORTAGE IN CHIASMATA 1 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1I842 | 0.0e+00 | 82.90 | protein SHORTAGE IN CHIASMATA 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
A0A6J1I320 | 0.0e+00 | 82.70 | protein SHORTAGE IN CHIASMATA 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
A0A6J1I9N8 | 0.0e+00 | 82.84 | protein SHORTAGE IN CHIASMATA 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
A0A6J1GJP5 | 0.0e+00 | 82.18 | protein SHORTAGE IN CHIASMATA 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1... | [more] |
A0A6J1GL72 | 0.0e+00 | 81.99 | protein SHORTAGE IN CHIASMATA 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1... | [more] |
Match Name | E-value | Identity | Description | |
AT5G52290.1 | 9.8e-234 | 36.13 | shortage in chiasmata 1 | [more] |