
Tan0017911 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAGTTGAAAATAGGGCGTTGTATTATCCGGTCAGTCCCAATGTCAATGTGTGCGAAACATTTCGAACCCTTTCCGCTGCGAAGCCACAAACTTCACTCTTCGACGATTCTCTGCCCTTCCATTCGTCTTCTTCCTCCATCTCCAAACCTAATCTGCAAATGCGAAAGGGCGATTTCCTCCATTGAACTTCCTCCCAATGCCCTTCGCCGCAAGCTCGATCCTCACTGGAGAGGAGGTTTCAGTCTAGGGGTCGACCTCGGCACGTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCTACTCGTCCTCTTACCGTAATTTTTCTGTCAATTGAACTTCATTTCGTTTCATTTTTCCGTCTGTGCGATTTTTTTGTAGCTTCTAATTTCAGGACATTGAATGTTTTCCTTCTTGCTTGCTAAATTCTCTGTTAAATACGTTATTAACGCAGTCTGCAGTTCCCCACTTTATGAACGGTTTATACAATCCACCTCTACGCTCTTTTTCCTGACACTGTTTTATGTTATACCTAAATATTGAAATTATGAACGGTTTCCAGCGTTTAACTCAGTGTTGTGAGTTATTAAATGTTTCTGCCTCATGATTTCTTTAGCTGACTTAGGTTTTGGAGTTGCGAGGACAAAAGCTTGAAGTTAAGCTTATTGAGATTGCTGAACAGGAGGTATATTTCTCTCCCTCTCTGAAACGCGATCAACATGTTCGAACTTTATTTCTTTTCTTTACTACATATTAATGGATGAAAAAAACTGTAGGAAGCTGATGAATTTATAATTGGCCTTCCTAAATCATGCGATGGGAAAGAGACACCTCAGTCGAACAAAATTCGTAGTATTGCCGGAAGGGTGGCAGCCCGGGCAGCTGAAAGGTGAAATGCCCTGAATGATTGGACTTCATTTCCTCTATGTTTGCATTTCTGTTCTGATACAGCTTTTAGTTTAGGGGTTGGAGGGTTTACTTGCATGATGAACATGGGACAACAGCAGAAGCGGAAAGCCATATGATTTACAAGTATTGTTGTCCTCAGAACTTACTTATGTTGTCTTTTGTTTAACATTGTTACCGTGGATCTATCCTATAAAATTTTGATGCTTCTCCTTTATTTTGTTAGTGTGGATTCTGTATCCTGTAAAATCCATTGCACTTAATGGAGATTGTCATTCAACAGAGTGCCAGATTCATTTTATTCATTTCCTTTGAAGATTTTGATGACATAGATTTGAGGGGTTTGTAGAAATGATAGACTACTATGTAAAGATTCTTAGGCTACAGAGGAACTAAAACTGATGTTAGTCTCTACCATATTGTGGCATTAACCTCATGAATTTATCAAAGGTGATGCGGGCAATTGGTTGCTAATTGCTATGGTTTTATTGGGATAGGTAGGAATGGAGGAGATGCACATTTTTTTAGAAAAAGAAACAAGATGGAGGAGATGTACATTTGAGATAAGAAGATAGGAAAAGCTCACCCAAAATGAAAAAATAAACATACAAGAAATGTAATTTTCACCATCAGCTAGGAAATAAGGAATATATGGCTTCAATAGTCAATGTGGTGGAACCAATTCCTACATTACAAAATATGCAGACAAGTGCTGGAACCAATACCTAAGGATTTATGGGGCCTGGACTTTTCCAAGAGCATTGGGATACTATCATCCAGTTTTCATGGTATAAACTTCTTGACCGAAGCTCTTACTTTGTGGCTTAATGATTGCAAAACACTCCTTTGATATTTGTAGCTGGAAAAGGAGAGAGAACATATTTTTTGGATTTAGCGCATCCTCTTGGACCGCGTTACACAATTTTTTTTTTTTATTACTCTGATTTTCTTTTTAAAGCTAGATGGGATGGGAACCTTTGTTGAAACTCCTTGGTTTGGGCTGGGGGGATGCCTCCCTCTCTTTGGTGTACTCCTTGGATTTTTGGGCTCCTAAGTCAAGCTTATTATGGATAATCTCAGTTTAAGCTTTACTTTCAGCATTTTGGTTGGAGAGGAATCAAAGGATCTTTGAAACCAGGCTCTTTCATTGGTTTAGTCATTTTGAGTCTACTAGATTAAAAGTTTCTTCTTGGTTTTATCTTTCTAAGCTTTTTGTTGGTTTTTTATTTCAAGATTTTGTTTGGATTTGGGATTGTTTTATCTTTCCTTTATATGTTTGTTTTGTTTCCTGTTAAAAAAAGAAACAAGAAACAAGGAGGATTTAACAGAGGCATAGAAAATCTATATGAGAAAAAGAATACCTCTGATGGGAACTTCTATTTGAGATTTCAATCGAGAAAATAGGGACTGAAACATAATCGGAGGAAAATACAAGTGTTGATAAGCATTTTAGAGGTTTAGTTCTCATCCAAGACTAATCCCAAAATAGCCCAAATTCTCAAACCACCCTAATCCCTAACCAAATGAGAATTCTCACATCTACAACCTCCTACAAAGAGTCCCCAGTGATCTTCTCCACCTTATTAATTTACTGACGGAGGGCGGGATGTTAAATAAAGCAAGTAAGTTGGAATGTCACCCAGCACAAACTAGTTAATGTCAACCTACTCTCTTAGAAAATAACATCCTTTTCCAAGATTTGAACTTTTTGTACAACAGGGTTCCCAAAGGACGAATGGTTGAGGTTGTGTTGAAGGGGAACACCTAAATAAGGAGTAGGGGGCCAGGGCCACCAACTTCACACCCCGCTAAGGCCTTCCCTTCCCACTAGAAATTTTGGAGGGATCACAACTAATACAAATAAGACTGTTCTTGTTTCTATTTGTCTGAAGACCGGAAATAACCTCAAGCACTTTCGAGATTTTGTTAAGATTAGCGAAGGAATTCTCCCCGCCTGAATAAAAAGAAAATGTGTCATAAGTGAGCTACAGATGAGAGAGTCCCTCAACCACTTAGTTAGAATTCACCAAAAGCTACTTCAGTTGCAATCCGTACTTCTACTTCCAGCTTCTTTTGATTAAAAAGTAATTCTGATTGCAGTTCGAAAAGGAGGCATCATTCCACCAAAACTATTCCAACCTGCGTCACTCTATCATATATTAAATTGCACTAGAGATCTGATGTCCAAGTTCAATGGCTCTAGTAACTGCTCTCTCCTAAATGAATTAGACATTGCCTGTGAAATGAATTATTGAGGAGTATGTAAGGAAACCCTGCTTCACTTGGTTAACACACTCCTCTTTGTATACAGTCGGTTGATATCCTTATCAAGCTTTTATCAAAACCTAACTTTGATGAACTACAAGTTGGGATTGTATAATATATACAACCCACCTTGAAGGGGGAGTGTTGTTAATTATAGTCAAATTAGGGCAATATTGTATTTTTGTATTTTAGGCAATATTGTATTTTTGTATTTTAGGTTATCTATATCCTATTTTAGTTTATATTCCTTTAAGTATATTTAAAATTTGATTTGGGTAGAATATTCTTTCTTTTTATGTTGTGTTGTATAGTGTATTTATCTAATGTTTGTATAGTTGAGGTATGAATGAAATATACAGAAATTCTTCGTTGAAAAATAAATAATGATTGCCCCTTTGTATCAGTATACATCTATACTTCTCTATTTGGGTTGGTTACATACATCTTGTATAACGTTGAACGAGTTATGAATTGGGAAAATTGACCATTCCATGTTTTCTCCAGGGGGCTCAATAAATCTACTCGGCAGAAAGAAATCGATGCCTATGCTGCCATGGTAAAGTGGTGAAAGTTCTCATATTTATGAGCATTGGATGATAAATGCAGCAATGCTTATCAAGTGCATATCTTTTTACCTATAATTTTCTCAAAGTTTTACTTTCTTAATTTTGATGCAGATGGTACTCGAGAGATATTTTTCCATGTCAGGCCATGGAACCGAACTTGTAGTGCCTAAGAGTTTAACCTTACAAGAAAAACTTATCGAGGGACCACCCACAGACCCGGACTTTATGGATTGAGAATGTGCTTTAGGCTAGGAAAAAACCAACTGGGAAGAGGCCCTTGGTCAAAAGTTAGGGAATTCCTGATTGCTTTTTTTGACAAGAAAACAAGATTGCTATTCAACAAAGGTATTTATTTCTGCTCAAGTGGAAGAGAGCCGCTACCCATTTAGAAAGAGGGAGGGTTACTTCCTCAAAAGATGGTCACCAATTTGGGTGAAAGAGATACGTTCCTCATGATGGTTGAATTGAAGGTAGTGGTGGTCGTGAGATAATACATTTTGACATTATATCTTTATGACATTCTTGCCAGAATCTCCCTGTCATATATTAAATTCACCTAGACTTTGGTTAGTTAAGGATGAGATTTGCTCCAGTCCTCCCTATACTATAGGCGCCTTTGCACTGTGCTTGTCCTCGATCAGAAAAGTTGATCTCTATCTAACTAGCAGAAAAAATGGATCTGCAGAATCCCATGTGTACTGGCTTCAAAAATGTTCTTAACAAAGAATTTGATCATGCACCTAGTCATAATGAGATTTAACCATTTAAATATAA TTTAGTTGAAAATAGGGCGTTGTATTATCCGGTCAGTCCCAATGTCAATGTGTGCGAAACATTTCGAACCCTTTCCGCTGCGAAGCCACAAACTTCACTCTTCGACGATTCTCTGCCCTTCCATTCGTCTTCTTCCTCCATCTCCAAACCTAATCTGCAAATGCGAAAGGGCGATTTCCTCCATTGAACTTCCTCCCAATGCCCTTCGCCGCAAGCTCGATCCTCACTGGAGAGGAGGTTTCAGTCTAGGGGTCGACCTCGGCACGTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCTACTCGTCCTCTTACCGTTTTGGAGTTGCGAGGACAAAAGCTTGAAGTTAAGCTTATTGAGATTGCTGAACAGGAGGAAGCTGATGAATTTATAATTGGCCTTCCTAAATCATGCGATGGGAAAGAGACACCTCAGTCGAACAAAATTCGTAGTATTGCCGGAAGGGTGGCAGCCCGGGCAGCTGAAAGGGGTTGGAGGGTTTACTTGCATGATGAACATGGGACAACAGCAGAAGCGGAAAGCCATATGATTTACAAGGGGCTCAATAAATCTACTCGGCAGAAAGAAATCGATGCCTATGCTGCCATGATGGTACTCGAGAGATATTTTTCCATGTCAGGCCATGGAACCGAACTTGTAGTGCCTAAGAGTTTAACCTTACAAGAAAAACTTATCGAGGGACCACCCACAGACCCGGACTTTATGGATTGAGAATGTGCTTTAGGCTAGGAAAAAACCAACTGGGAAGAGGCCCTTGGTCAAAAGTTAGGGAATTCCTGATTGCTTTTTTTGACAAGAAAACAAGATTGCTATTCAACAAAGGTATTTATTTCTGCTCAAGTGGAAGAGAGCCGCTACCCATTTAGAAAGAGGGAGGGTTACTTCCTCAAAAGATGGTCACCAATTTGGGTGAAAGAGATACGTTCCTCATGATGGTTGAATTGAAGGTAGTGGTGGTCGTGAGATAATACATTTTGACATTATATCTTTATGACATTCTTGCCAGAATCTCCCTGTCATATATTAAATTCACCTAGACTTTGGTTAGTTAAGGATGAGATTTGCTCCAGTCCTCCCTATACTATAGGCGCCTTTGCACTGTGCTTGTCCTCGATCAGAAAAGTTGATCTCTATCTAACTAGCAGAAAAAATGGATCTGCAGAATCCCATGTGTACTGGCTTCAAAAATGTTCTTAACAAAGAATTTGATCATGCACCTAGTCATAATGAGATTTAACCATTTAAATATAA ATGTCAATGTGTGCGAAACATTTCGAACCCTTTCCGCTGCGAAGCCACAAACTTCACTCTTCGACGATTCTCTGCCCTTCCATTCGTCTTCTTCCTCCATCTCCAAACCTAATCTGCAAATGCGAAAGGGCGATTTCCTCCATTGAACTTCCTCCCAATGCCCTTCGCCGCAAGCTCGATCCTCACTGGAGAGGAGGTTTCAGTCTAGGGGTCGACCTCGGCACGTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCTACTCGTCCTCTTACCGTTTTGGAGTTGCGAGGACAAAAGCTTGAAGTTAAGCTTATTGAGATTGCTGAACAGGAGGAAGCTGATGAATTTATAATTGGCCTTCCTAAATCATGCGATGGGAAAGAGACACCTCAGTCGAACAAAATTCGTAGTATTGCCGGAAGGGTGGCAGCCCGGGCAGCTGAAAGGGGTTGGAGGGTTTACTTGCATGATGAACATGGGACAACAGCAGAAGCGGAAAGCCATATGATTTACAAGGGGCTCAATAAATCTACTCGGCAGAAAGAAATCGATGCCTATGCTGCCATGATGGTACTCGAGAGATATTTTTCCATGTCAGGCCATGGAACCGAACTTGTAGTGCCTAAGAGTTTAACCTTACAAGAAAAACTTATCGAGGGACCACCCACAGACCCGGACTTTATGGATTGA MSMCAKHFEPFPLRSHKLHSSTILCPSIRLLPPSPNLICKCERAISSIELPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEVKLIEIAEQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEAESHMIYKGLNKSTRQKEIDAYAAMMVLERYFSMSGHGTELVVPKSLTLQEKLIEGPPTDPDFMD Homology
BLAST of Tan0017911 vs. ExPASy Swiss-Prot
Match: A1SJC8 (Putative pre-16S rRNA nuclease OS=Nocardioides sp. (strain ATCC BAA-499 / JS614) OX=196162 GN=Noca_2408 PE=3 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.7e-11 Identity = 50/137 (36.50%), Postives = 75/137 (54.74%), Query Frame = 0
BLAST of Tan0017911 vs. ExPASy Swiss-Prot
Match: Q3SR28 (Putative pre-16S rRNA nuclease OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=Nwi_2004 PE=3 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 5.9e-09 Identity = 45/137 (32.85%), Postives = 74/137 (54.01%), Query Frame = 0
BLAST of Tan0017911 vs. ExPASy Swiss-Prot
Match: B8DIJ5 (Putative pre-16S rRNA nuclease OS=Desulfovibrio vulgaris (strain DSM 19637 / Miyazaki F) OX=883 GN=DvMF_2352 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 7.8e-09 Identity = 40/134 (29.85%), Postives = 72/134 (53.73%), Query Frame = 0
BLAST of Tan0017911 vs. ExPASy Swiss-Prot
Match: C6C125 (Putative pre-16S rRNA nuclease OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIMB 8403 / VKM B-1763) OX=526222 GN=Desal_1125 PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08 Identity = 42/133 (31.58%), Postives = 70/133 (52.63%), Query Frame = 0
BLAST of Tan0017911 vs. ExPASy Swiss-Prot
Match: Q3SFS3 (Putative pre-16S rRNA nuclease OS=Thiobacillus denitrificans (strain ATCC 25259) OX=292415 GN=Tbd_2580 PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08 Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = 0
BLAST of Tan0017911 vs. NCBI nr
Match: XP_022979278.1 (uncharacterized protein LOC111479048 [Cucurbita maxima]) HSP 1 Score: 407.1 bits (1045), Expect = 9.8e-110 Identity = 204/232 (87.93%), Postives = 212/232 (91.38%), Query Frame = 0
BLAST of Tan0017911 vs. NCBI nr
Match: XP_023528266.1 (uncharacterized protein LOC111791236 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 404.8 bits (1039), Expect = 4.9e-109 Identity = 203/232 (87.50%), Postives = 212/232 (91.38%), Query Frame = 0
BLAST of Tan0017911 vs. NCBI nr
Match: KAG6582728.1 (hypothetical protein SDJN03_22730, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020681.1 yqgF [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 403.7 bits (1036), Expect = 1.1e-108 Identity = 202/232 (87.07%), Postives = 211/232 (90.95%), Query Frame = 0
BLAST of Tan0017911 vs. NCBI nr
Match: XP_022924794.1 (uncharacterized protein LOC111432185 [Cucurbita moschata]) HSP 1 Score: 402.1 bits (1032), Expect = 3.2e-108 Identity = 202/232 (87.07%), Postives = 211/232 (90.95%), Query Frame = 0
BLAST of Tan0017911 vs. NCBI nr
Match: XP_038893103.1 (putative pre-16S rRNA nuclease isoform X1 [Benincasa hispida]) HSP 1 Score: 401.0 bits (1029), Expect = 7.0e-108 Identity = 203/235 (86.38%), Postives = 213/235 (90.64%), Query Frame = 0
BLAST of Tan0017911 vs. ExPASy TrEMBL
Match: A0A6J1IVR0 (uncharacterized protein LOC111479048 OS=Cucurbita maxima OX=3661 GN=LOC111479048 PE=3 SV=1) HSP 1 Score: 407.1 bits (1045), Expect = 4.7e-110 Identity = 204/232 (87.93%), Postives = 212/232 (91.38%), Query Frame = 0
BLAST of Tan0017911 vs. ExPASy TrEMBL
Match: A0A6J1EA74 (uncharacterized protein LOC111432185 OS=Cucurbita moschata OX=3662 GN=LOC111432185 PE=3 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 1.5e-108 Identity = 202/232 (87.07%), Postives = 211/232 (90.95%), Query Frame = 0
BLAST of Tan0017911 vs. ExPASy TrEMBL
Match: A0A6J1CTB8 (uncharacterized protein LOC111014097 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014097 PE=3 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 3.2e-98 Identity = 195/236 (82.63%), Postives = 203/236 (86.02%), Query Frame = 0
BLAST of Tan0017911 vs. ExPASy TrEMBL
Match: A0A0A0L3L5 (YqgFc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116900 PE=3 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 8.7e-96 Identity = 190/223 (85.20%), Postives = 197/223 (88.34%), Query Frame = 0
BLAST of Tan0017911 vs. ExPASy TrEMBL
Match: A0A1S3AUT7 (uncharacterized protein LOC103483114 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483114 PE=3 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 3.7e-94 Identity = 189/235 (80.43%), Postives = 200/235 (85.11%), Query Frame = 0
BLAST of Tan0017911 vs. TAIR 10
Match: AT1G12244.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 262.7 bits (670), Expect = 2.8e-70 Identity = 128/186 (68.82%), Postives = 157/186 (84.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|