Tan0017897 (gene) Snake gourd v1

Overview


Name	Tan0017897
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	DNA-repair protein XRCC1
Location	LG06: 2614093 .. 2621012 (+)
RNA-Seq Expression	Tan0017897
Synteny	Tan0017897

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAATGGGATAATGAAGGAATTATGAGCCAGAAACACAAATTAACGAAATTCCAGGGGCTGAAGTATGAAATGGTGCAGCTTCTATAGTTCGAAACGGTGGGAAATCTGGGAGGGTCGCAGTCGCAGCAGCGCTAGGTGCTGACTTTTTGAATCGACTCAGAATCTTCCGAGTGAAGTAACTGGAAGTCGAATTTAGGTATTGTTTCTTATTTCTATTATCATCTTCCTGCAATCTTCTCTGATTTCTTGCTAACCCTACTCGATCATAAAACGCTGTTATTTCAGTGGTCAAATTTCACTGCAGGCGATTGCATGCCAAACTTAATGCACACTTAGAGCTCAATTTTTGAACATTTTGTGTTTTGACCTCATTTGAGCTAAATACTCCTATTTTCATGTCGGTTGGCTGGCAAATGTTGCGTTAATTTATATTATTCTTCACTATTTCTTGCTACAAAGTGGAAACATTAGTTTTTCAAGTTTGACCCGGTACTGAGAATTGATGAGATGCAACTGATGAATTCGTTTAGTTTTGGTTGAGTTTAGTGCTCTGTCATTCCTCCTGTTAATTATTTGAAGTTGTTTATGAATCGCAAGACAGCGTCCCTTATCTGTGCAGGCTCTTACGCGTACCTATTTGAGCTTTCTGATAATGGTGCTTGGAGAACAGATATCTTTCGGATATTTCTGCAAGTTTTTTTTAAATTTGAGATGAACTGACAAATTTTAGCCCGGCGGTAGAAATATAATCGTTTTAGTAGGACCAATATGTCGTATTCAAAGGCTAATGAGGGTGGTGGCAATGCTAAGCGCAGTCTTCCTTCATGGATGAGTGGGAAGGATGATGGGAGTACTTCTCGAGGCAAGAAACCGAACAGGTCTGGTTCTGGTGGAACTGAAGTGATGGCTGAAGCTGAAGAGCCTAAGCCAGGGAAAGGAAATGGTGAAGGTCCAGTGAGCAGTTCATTACACAAAGATTTCTTCAGACTTCTGGTTCACATATTGTTTCTTTTCACCCCTTCTGTTTCCTATAGATGTGTCATTTCTACATATTTTGATCATTTACAGTTACACTAAGCTATTTACCAACGTTAAATGCAGGAAGGAGTAGTATTCGTGTTGTCGGGTTTTGTTAATCCTGAGCGCAGCATTCTGCGGTCCCAGGCATTAGAAATGGGAGCTCAATACAAGCCCGATTGGGACCCAGATTGCACTTTGTTGATCTGTGCTTTCCCAAATACTCCAAAATTTCGACAAGTGGAATCAGATTGTGGAACAATAGTATCAAAGGTTTTTTCTTTTTAACGAAAACTTGAACATTCGTCAGAGAGTTTTTCAAAGAAATTTGTGCTGGTTTTTTATGTGGAGGAGTCCAAGAGTCACTAACTCACAATTTTTCTGATGCTAGATTTGACTACGTGGAACAATTGATAGCAATATGTTTGCTGTCAATCATTAGGGACTGTTTGGGCGTGGGTTATAATAACCTATTGAGTACTCTGCACTCCAAACACAGACTATTATAACTCTAGACTAAACAATTATGCATTTTAAACAATATTATATAATTCCACGGACTATTATAACTCATGTTATTATAAACAGCTCAATGTTGTCTTTTTCTTTTTTCTTTTTTTTTTTTTTTGATAGGAAAGTGAAATTTCATTTATGATATGAAATTATAAAAAAACTGAGGTCCTATTAGAAGTTACAAAAGAATTTTCCAATGGATAATCGAAGTCCATAATTACAAAAATAAGTACTATTAATGATATAAAATAAATCTTCTCCTCTATTTTAGTAAGTTCTGTATATTCCATGGTTATTTTGAAATATTCTGTCTTGCTTATGTCCTGGGTTATTTTTCTTGGGTGATGATAACTAATAAGTTTAATTCTTCTTTAAGCGCATTTATATCATATTGATCTAATTAGGCAGTGTGCTTTTCCTTTCAACTTTCAAGTACATTCAATATCTGCACATCTTCGGAGATTTAGATGTTTCTAGAAATTTACTCTAAAATCTGACTGAACCATTATCTGGTTGTCATTGGTAGGAGGATTCTAAATTGTAGATTTAGATTCTAAGTATTCTCATTCTTTTATACCTGTCAGGAGTGGATTTCAAATTGTTATGCACAGAAGAAGCTCGTTGACATTGAAAGCTACCTTCTCTTTGCTGGAAAGCCCTGGCGAAGAAGCAACCTTTCACATGAAGCCGCCCAAGGTAATCTAGAAATGCATACGTTTGCAGGGTTGTTGATTCCTCGAAAAATTAATGAGGGTTATAACCACCATTTCCATAGGTTGGCACAATTGTTATAGAACTATACTTAAAGAGACAAGTCGTATATTCAAATACCTTTGTTTTCAAAAATTGTTTTCGAATTTGTGATCCAAATAATGAAAATTCTAAAAACAACATTTTTTATGTTTTCATTGTATCCAGATTTTGAATTTGAAATTTTAAAATGCATGTTTATATTAAAAAAGATAAAAACTTTAATAAATATTGTATTTCATGTTCTTTAACTCAATTTATTTTTATTAGATTAAAATATTATAATATAATATATTATAAATTATATGATATTGTAGAATCACAATTATGCAAAATTTATAATAAAAAAACATGTTCATAAATTAATTAGTTTATATTCAACCTAATATTTAGTTTTGCAACTAAAACTAGTTTCATTGTCTATAAATATATTATAGAACACATTTTGAACAATTCTTTAAATTGGAATCCAATCTCTAAATCTGCTACTGAACACATATTTGAAAACATGAAATGCAACTCAGTTTTCATTGAATCCCTTGTTTTCAAAATTCTGTTTTCAGATTGCCTACCAAACAAACCCTAATATTCTACATGCTTCCCATTCCAAATGGCACAGGATGAAATGGTAGTCCATTGAGATTAGTCAAGATACACACAATCTAGTCCAATAATTGTAATAGTAACAGTATGTACATATTTTATATTAGTGTAGCGAGGTTTCTTTCCAATTTTATTCTTACAAATTCTGAAGTAAAAATCTGGTTTTTCTGCATATCGTTTCAAATGCTTAAATTGTTAGAATAGTTGCTTGATAATATGTTTCCATGGTTCCATCTTTTGCTCAAGTGCCTTGCTTAATGTTACATGTTTTCTTCCGTGAGAAAGTATAGAGTAATATGCATCCAGGGCCAATTGAAGGTAAAACTCATCATGTTCACCATAGAATTGTTGTGCAACAAAAAGGCCATCATCTGAAATAAATTATATGCAAACTAAGATCATTTTTGCCGACCTACCAACTTTTTTTAAAGAATAAACGAACTTCTCAATGACGATATGAAAAATACAAAGAGAGAGTAAAACTAAAGGAGGTTAGAAAAGCCACTCCAACTGGTTGCAAAGAGAGAGGTTTTATAAATACTCAAGAGAAAGGGAGTGTACACAAATGACCCCAGACCTTTAATTTTGTTTCCCAAATCCCAAATCTCCTCCCAACCTTACTAGTTCCTTCAAAATCTATTCAATTCCTTTCCTACCAAACATTCTAAAGTAGTGTTTTTCCCGCACAAATCTCAAAATCTAAGATTTCTGTTGAAGAAACGCCACAAAGGAGTTAGTGAAGGTTCACAGCAAGGGAGTGTACCACACAACAATTGAAGCTAAACTCCTTAAAAACCTCGCTCCAGCATCTTTAAGTGGTTTTACAACTAAAGAAAAATATGTTTCTTCTTTCCCCGTTCTTTCATTAGATGCACCGGCATGGAAACAAGTGTCAATAAAGATTTCTTTTCTGATTTTTTTTTCACTGTGGTGTGCCTATTCAAAATCATAGACTGAACAAAGAACGTGGCCTTTTTAGGATACTTAGACCACAAAATCTCCTTGGATTGATCTACCAACTACCTTGTGTATATCTACACCTTTGTGTATTTTAGATCCTAAGAATGAATCGCCAATATGAAGCATAGCTTAGTGGATAAAGGTTCCTATTACCTCGGAAAGGTTCAATTCCCCAAGTGAATTAGAAATGGTGACAACATGAGGCAGTTGCATTTATTGGAGTATTGCATCATGTGTAGTATTGACGTATGCTATAGCTATGTAATTTGGGTTGGTGTCATGACTTGACACCCAAAAATTCTTGTGCCTATCATTTTGTTGTTTTCCTGATTTTTGCTATGTTTTGATGCTTCTGCTCCTTCACTTTGTACCCGATGCTGAAGAATTATTTCTGAAATACCCATCATTGATTTTCATCCCTGGGATGTATGGTTGCAGCTATTCCATCGCCATCCAAGAAACCTCAGAAACCAGTTGAAACAACTTCACGTTTAAAACCGAATGAGCGGGAGATAACTCAGGTAAATAGTCTGATTCTTGTGAAATTCTATATCTTTTATTTATTATTATTATAAGAAACAAAAGAATATATATTGCTTAGAAGAACGTTCAAAAGGGGAGATGAGATATCCCCACTAAGCCAAAGGGTTACAAAAAGGACTCCCAATTGGCCATAATTCTATATCATTATATCATATTTGTTCTTCCATCCTGATTTGTGTGCTTTATATGTGAAATAATAAAACAAAGCTAGACCTTTTGCAGGATGCAGATTATTGTTCAGCTACAACTTTTATATTCATATATGTACGAATGCTGATATGTAGATATTTAGAAGTTTGATTGTGCGCTATATGCAGAGTAGAGAGATTAATTCTTCAAGAGAATGCTTTTCTCCTTTGAAATTGAAGAAGTGGGCTATTGATGATTACCATAAAACACTTTCCTGGCTAGAGAGTCAGGAAGAAAAGGTTAGAACAAAAGTGCTTACCTTTTTTTTGCAGAATATATGTTTTACTTCTTCATCTACCCAGTGCCCCATGCAAGTTAAATGGAAACCTGGCATTTTCTCTCTAAATAGCCTAATTGGTTTTTAGGAAGGCGTGGAACTCTTCCTTTTTTGCACACTAAGTTTGGATAAATGGCAGAACGTCGTTGATTTTATTTTGATTTTAATTCTTCATTTTAAACCTTTTTTAGCCAGATCCAAGTGAGATAAAGAAAATAGCAGCAGAAGGAATTTTAACTTGTTTACAAGATGCCATAGATTCTCTTCATCGAAATCAGGTAGACAAATGTTTCTCACAGGCGAATATGTAGTTGTGATCAATTTATTTCTCCATTGCATGGTAAATGCTTTTCCAATAATATGATAATGTGTAAAGAATGGTGATGAATAACAGAATAAGTAGATTTGTTTGTTATATTTCAACCTGCTTATTGGTATTGCCCTCTAGAAAAATACCTTTCAGATTGTGCGACTGCCCTCATATAGTTGAAGATTCGTATTTACTTACTATAAATTTATCAATGTTTGCCTGGATCAATTTCTTCTTAGGGTTTTAATTATTGCCAGATAACTTTCTTATTAGTCACTTCTTCCATTAGTTTTTTTTTTTTTTTTTTTTTTTCATATCTGTGGTGTTTGCGCCAACTTGCGTGCACCTCCACTAATCTCACGAAACAGTCGCCTGAATCTACTAGATTTGGATGCTAGAAAACTCGTAGGATACTAGATGTTAGATAGGTGGCCTCCATATTCCCTCTAAGCCCTTATTCTCCTTATTAACCACTAGGCCAACCCAAGAGGGTTACTTATTCGGCTAGTTATGAATACAGTATTTAAACTTTTCTATTTGTAGGGTGAGTAATTTTGTAATGTTGAAAGGACCCATCACTTTTTTTCTAAGTTTATTTTTCCATGTGAAGCAAACAGAATTTTGTTCGTCGTTCTGTTGTAAGTACTTCTTTGCCCTTCCATTTAATCTGGCTATGTGGCTTTTAGCTCTAGCCTCGCATCCCTTATTTCCTAAATGAACTCAGTAACTCACGAGTGTGAGAAAAAAACAGATGGTATTACGTACCAATCAGCTATACTGTGAATGTGCAGCATTTCAAACCTTTACATAATAGCTCATTGCAACTTAGCTCAAGAACAACTGTATTGTAGATTTCCGTTGGCTGAAATAAGCTCAAGTTCAATCGATTTTCCTGATTCTTGATTGGTGCTCGTAGGATTTGGTGCTTTCATGGTCTGCACAAGGGTCCTTTCAAATTTTTTACCGTCACTTCTCTCATTAAGCTCGACCAAATGCCTATCTCGCATCCTGCCTGCATACTTTATTGTTCGGTCTATTTTATTCAATGCAAAGATAAAAACAGTATCTGTTCTCAGTACAAAAAAAACAGTATCTGTTCTCAGTACTAGATTGGCACTTAACCCATATAATGCACATGCAGGACATCAATCAGATGACTGAGGAATGGAAATTCGTTCCTCAGGTGGTGGAAGAGCTGGCAAAGCTTAGCAATAGGAAGGAGTCAATATCGAAGGAGGAACTTTTTAAGCATGCTAGAGATTCTAAAAGAATTTATGAAGTCGAACTTAATTCTCTACTTGACAATTCCCCAGAAAGAAAGAAAAAGCCAAATATCAGTAAAGAACCGAAGAATGGTCATAAGGAAACGAAAGATATGTCTATTGCACATGAATATGATAGTGATGACACAATTGAGATGACCGAGGAAGAGATAGACATTGCATTCCAGAGAGTAGCTTGTAAGAAAACTTAGTTGAAGTCCTTTGGCTCAACTTGGGTAAAACTCTTCTGCTGTATGTAATGCCAGTCTGCTTTTTTTTAATCTCAAAAGTGAGAAGTCCAATTTGTTGATTCTATATTTTTGTCTCTCTCAAGTTTGCAATGATCACTTTGTTTCTTTGAGTGGCTGTACTTCTGACATGTTCAAAAAAGAATGGCTGTACTTCTGCCTTTCTTGGTTCTAGGCTGATGGGGATGATTAAAGTTCAAGCTTGGAGGTGTGGGAAGATGGAATAAAGGCTAAACTACACAAAA

mRNA sequence

AGAAAATGGGATAATGAAGGAATTATGAGCCAGAAACACAAATTAACGAAATTCCAGGGGCTGAAGTATGAAATGGTGCAGCTTCTATAGTTCGAAACGGTGGGAAATCTGGGAGGGTCGCAGTCGCAGCAGCGCTAGGTGCTGACTTTTTGAATCGACTCAGAATCTTCCGAGTGAAGTAACTGGAAGTCGAATTTAGGCTCTTACGCGTACCTATTTGAGCTTTCTGATAATGGTGCTTGGAGAACAGATATCTTTCGGATATTTCTGCAAGTTTTTTTTAAATTTGAGATGAACTGACAAATTTTAGCCCGGCGGTAGAAATATAATCGTTTTAGTAGGACCAATATGTCGTATTCAAAGGCTAATGAGGGTGGTGGCAATGCTAAGCGCAGTCTTCCTTCATGGATGAGTGGGAAGGATGATGGGAGTACTTCTCGAGGCAAGAAACCGAACAGGTCTGGTTCTGGTGGAACTGAAGTGATGGCTGAAGCTGAAGAGCCTAAGCCAGGGAAAGGAAATGGTGAAGGTCCAGTGAGCAGTTCATTACACAAAGATTTCTTCAGACTTCTGGAAGGAGTAGTATTCGTGTTGTCGGGTTTTGTTAATCCTGAGCGCAGCATTCTGCGGTCCCAGGCATTAGAAATGGGAGCTCAATACAAGCCCGATTGGGACCCAGATTGCACTTTGTTGATCTGTGCTTTCCCAAATACTCCAAAATTTCGACAAGTGGAATCAGATTGTGGAACAATAGTATCAAAGGAGTGGATTTCAAATTGTTATGCACAGAAGAAGCTCGTTGACATTGAAAGCTACCTTCTCTTTGCTGGAAAGCCCTGGCGAAGAAGCAACCTTTCACATGAAGCCGCCCAAGCTATTCCATCGCCATCCAAGAAACCTCAGAAACCAGTTGAAACAACTTCACGTTTAAAACCGAATGAGCGGGAGATAACTCAGAGTAGAGAGATTAATTCTTCAAGAGAATGCTTTTCTCCTTTGAAATTGAAGAAGTGGGCTATTGATGATTACCATAAAACACTTTCCTGGCTAGAGAGTCAGGAAGAAAAGCCAGATCCAAGTGAGATAAAGAAAATAGCAGCAGAAGGAATTTTAACTTGTTTACAAGATGCCATAGATTCTCTTCATCGAAATCAGGACATCAATCAGATGACTGAGGAATGGAAATTCGTTCCTCAGGTGGTGGAAGAGCTGGCAAAGCTTAGCAATAGGAAGGAGTCAATATCGAAGGAGGAACTTTTTAAGCATGCTAGAGATTCTAAAAGAATTTATGAAGTCGAACTTAATTCTCTACTTGACAATTCCCCAGAAAGAAAGAAAAAGCCAAATATCAGTAAAGAACCGAAGAATGGTCATAAGGAAACGAAAGATATGTCTATTGCACATGAATATGATAGTGATGACACAATTGAGATGACCGAGGAAGAGATAGACATTGCATTCCAGAGAGTAGCTTGTAAGAAAACTTAGTTGAAGTCCTTTGGCTCAACTTGGGTAAAACTCTTCTGCTGTATGTAATGCCAGTCTGCTTTTTTTTAATCTCAAAAGTGAGAAGTCCAATTTGTTGATTCTATATTTTTGTCTCTCTCAAGTTTGCAATGATCACTTTGTTTCTTTGAGTGGCTGTACTTCTGACATGTTCAAAAAAGAATGGCTGTACTTCTGCCTTTCTTGGTTCTAGGCTGATGGGGATGATTAAAGTTCAAGCTTGGAGGTGTGGGAAGATGGAATAAAGGCTAAACTACACAAAA

Coding sequence (CDS)

ATGTCGTATTCAAAGGCTAATGAGGGTGGTGGCAATGCTAAGCGCAGTCTTCCTTCATGGATGAGTGGGAAGGATGATGGGAGTACTTCTCGAGGCAAGAAACCGAACAGGTCTGGTTCTGGTGGAACTGAAGTGATGGCTGAAGCTGAAGAGCCTAAGCCAGGGAAAGGAAATGGTGAAGGTCCAGTGAGCAGTTCATTACACAAAGATTTCTTCAGACTTCTGGAAGGAGTAGTATTCGTGTTGTCGGGTTTTGTTAATCCTGAGCGCAGCATTCTGCGGTCCCAGGCATTAGAAATGGGAGCTCAATACAAGCCCGATTGGGACCCAGATTGCACTTTGTTGATCTGTGCTTTCCCAAATACTCCAAAATTTCGACAAGTGGAATCAGATTGTGGAACAATAGTATCAAAGGAGTGGATTTCAAATTGTTATGCACAGAAGAAGCTCGTTGACATTGAAAGCTACCTTCTCTTTGCTGGAAAGCCCTGGCGAAGAAGCAACCTTTCACATGAAGCCGCCCAAGCTATTCCATCGCCATCCAAGAAACCTCAGAAACCAGTTGAAACAACTTCACGTTTAAAACCGAATGAGCGGGAGATAACTCAGAGTAGAGAGATTAATTCTTCAAGAGAATGCTTTTCTCCTTTGAAATTGAAGAAGTGGGCTATTGATGATTACCATAAAACACTTTCCTGGCTAGAGAGTCAGGAAGAAAAGCCAGATCCAAGTGAGATAAAGAAAATAGCAGCAGAAGGAATTTTAACTTGTTTACAAGATGCCATAGATTCTCTTCATCGAAATCAGGACATCAATCAGATGACTGAGGAATGGAAATTCGTTCCTCAGGTGGTGGAAGAGCTGGCAAAGCTTAGCAATAGGAAGGAGTCAATATCGAAGGAGGAACTTTTTAAGCATGCTAGAGATTCTAAAAGAATTTATGAAGTCGAACTTAATTCTCTACTTGACAATTCCCCAGAAAGAAAGAAAAAGCCAAATATCAGTAAAGAACCGAAGAATGGTCATAAGGAAACGAAAGATATGTCTATTGCACATGAATATGATAGTGATGACACAATTGAGATGACCGAGGAAGAGATAGACATTGCATTCCAGAGAGTAGCTTGTAAGAAAACTTAG

Protein sequence

MSYSKANEGGGNAKRSLPSWMSGKDDGSTSRGKKPNRSGSGGTEVMAEAEEPKPGKGNGEGPVSSSLHKDFFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFPNTPKFRQVESDCGTIVSKEWISNCYAQKKLVDIESYLLFAGKPWRRSNLSHEAAQAIPSPSKKPQKPVETTSRLKPNEREITQSREINSSRECFSPLKLKKWAIDDYHKTLSWLESQEEKPDPSEIKKIAAEGILTCLQDAIDSLHRNQDINQMTEEWKFVPQVVEELAKLSNRKESISKEELFKHARDSKRIYEVELNSLLDNSPERKKKPNISKEPKNGHKETKDMSIAHEYDSDDTIEMTEEEIDIAFQRVACKKT

Homology

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BLAST of Tan0017897 vs. ExPASy Swiss-Prot
Match: Q24JK4 (DNA-repair protein XRCC1 OS=Arabidopsis thaliana OX=3702 GN=XRCC1 PE=1 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 7.6e-86
Identity = 193/371 (52.02%), Postives = 242/371 (65.23%), Query Frame = 0


Query: 14  KRSLPSWMSGKD---DGSTSRGKKPNRSGSGGTEVMAEAEEPKPGKGNGEGPVSSSLHKD 73
           KR+LPSWMS +D     S S  KKP     G TE       P       E    SS   +
Sbjct: 4   KRNLPSWMSSRDPEITPSKSHCKKP--KDEGPTEEHNSRNAP---SNKSEHAEPSSNTTE 63

Query: 74  FFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFPNTPKFRQVES 133
           F +L+EGVVFVLSGFVNPERS LRSQAL MGA Y+PDW+   TLLICAFPNTPKFRQVE+
Sbjct: 64  FSKLMEGVVFVLSGFVNPERSTLRSQALTMGATYQPDWNAGSTLLICAFPNTPKFRQVET 123

Query: 134 DCGTIVSKEWISNCYAQKKLVDIESYLLFAGKPWRRSNLSHEA-AQAIPSPSKKPQKPVE 193
           + GTI+SKEWI+ CYAQKKLVDIE YL+ AGKPWR+S+   +A  +     SKKP+K VE
Sbjct: 124 NGGTIISKEWITECYAQKKLVDIEQYLMHAGKPWRKSSSPQDANREKREHLSKKPEKQVE 183

Query: 194 TTSRLKPNEREITQSRE-INSSRECFSPLKLKKWAIDDYHKTLSWLESQEEKPDPSEIKK 253
             +  +      +++R   N  +E F   ++KKWA DD  +T+SWLESQEEKP+P EIK+
Sbjct: 184 KKTETRGTPSTSSKNRSACNLVKEPFFVTEVKKWARDDLSQTISWLESQEEKPEPGEIKR 243

Query: 254 IAAEGILTCLQDAIDSLHRNQDINQMTEEWKFVPQVVEELAKL--SNRKE--SISKEELF 313
           IAAEG+LTCLQDAIDSL + QDI  +TE W FVP+VV+EL K+  S++KE  + SKEE+ 
Sbjct: 244 IAAEGVLTCLQDAIDSLEQKQDIGSVTELWSFVPRVVKELGKMESSSKKENSTASKEEVC 303

Query: 314 KHARDSKRIYEVELNSLLDNSPERKKKPNISKEPKNGHKETKDMSIAHEYDSDDTIEMTE 373
           K A+  K+IYE EL                    K G  E+    +A  YDSD T+EMTE
Sbjct: 304 KQAKSWKKIYEAEL-------------------AKPGEDESTS-RVACGYDSDMTVEMTE 349

Query: 374 EEIDIAFQRVA 376
           EEI++A++ V+
Sbjct: 364 EEIELAYRNVS 349

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BLAST of Tan0017897 vs. ExPASy Swiss-Prot
Match: Q60596 (DNA repair protein XRCC1 OS=Mus musculus OX=10090 GN=Xrcc1 PE=1 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 9.1e-23
Identity = 71/178 (39.89%), Postives = 93/178 (52.25%), Query Frame = 0


Query: 24  KDDGSTSRGKKPNRSGSGGTEVMAEAEEPK----PGKGNGEGPVSSSLH---KDFFRLLE 83
           K     S  K+P  S    T   A A  P     PGK  GEG          ++  ++L+
Sbjct: 262 KPSAGPSTLKRPKLSVPSRTPAAAPASTPAQRAVPGKPRGEGTEPRGARTGPQELGKILQ 321

Query: 84  GVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFPNTPKFRQVESDCGTIV 143
           GVV VLSGF NP RS LR +ALE+GA+Y+PDW PD T LICAF NTPK+ QV    G IV
Sbjct: 322 GVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFANTPKYSQVLGLGGRIV 381

Query: 144 SKEWISNCYAQKKLVDIESYLLFA-GKPWRRSNLSHEAA---QAIPSPSKKPQKPVET 191
            KEW+ +C+  ++ +    YL+   G        SH  +   +A   P K+PQ   +T
Sbjct: 382 RKEWVLDCHHMRRRLPSRRYLMAGLGSSSEDEGDSHSESGEDEAPKLPQKRPQPKAKT 439

[Close]

BLAST of Tan0017897 vs. ExPASy Swiss-Prot
Match: P18887 (DNA repair protein XRCC1 OS=Homo sapiens OX=9606 GN=XRCC1 PE=1 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 2.7e-22
Identity = 63/153 (41.18%), Postives = 85/153 (55.56%), Query Frame = 0


Query: 45  VMAEAEEPKPGKGNGEGPVSSSLH---KDFFRLLEGVVFVLSGFVNPERSILRSQALEMG 104
           V A A+    GK  GEG          ++  ++L+GVV VLSGF NP RS LR +ALE+G
Sbjct: 287 VPARAQGAVTGKPRGEGTEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSELRDKALELG 346

Query: 105 AQYKPDWDPDCTLLICAFPNTPKFRQVESDCGTIVSKEWISNCYAQKKLVDIESYLLFA- 164
           A+Y+PDW  D T LICAF NTPK+ QV    G IV KEW+ +C+  ++ +    YL+   
Sbjct: 347 AKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLMAGP 406

Query: 165 GKPWRRSNLSHEAAQAIPSPSKKPQKPVETTSR 194
           G        SH       +P K PQK  +T ++
Sbjct: 407 GSSSEEDEASHSGGSGDEAP-KLPQKQPQTKTK 438

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BLAST of Tan0017897 vs. ExPASy Swiss-Prot
Match: Q9ESZ0 (DNA repair protein XRCC1 OS=Rattus norvegicus OX=10116 GN=Xrcc1 PE=1 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 4.5e-22
Identity = 74/206 (35.92%), Postives = 101/206 (49.03%), Query Frame = 0


Query: 9   GGGNAKRSLPSWMSGKDDGSTSRGKKPNRSGSG-----------------GTEVMAEAEE 68
           GG ++K   P     K D      K P++  +G                  T     A++
Sbjct: 234 GGSSSKLQEPPKGKRKLDLGLEDKKPPSKPSAGPPAPKRPKLPVPSRTPAATPASTPAQK 293

Query: 69  PKPGKGNGEGPVSSSLH---KDFFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDW 128
             PGK  GEG          ++  ++L+GVV VLSGF NP RS LR +ALE+GA+Y+PDW
Sbjct: 294 AVPGKPRGEGTEPRGARAGPQELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDW 353

Query: 129 DPDCTLLICAFPNTPKFRQVESDCGTIVSKEWISNCYAQKKLVDIESYLLFA-GKPWRRS 188
            PD T LICAF NTPK+ QV    G IV KEW+ +CY  ++ +    YL+   G      
Sbjct: 354 TPDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCYRMRRRLPSRRYLMAGLGSSSEDE 413

Query: 189 NLSHEAA---QAIPSPSKKPQKPVET 191
             SH  +   +A   P K+PQ   +T
Sbjct: 414 GDSHSESGEDEAPKLPRKRPQPKAKT 439

[Close]

BLAST of Tan0017897 vs. ExPASy Swiss-Prot
Match: O54935 (DNA repair protein XRCC1 OS=Cricetulus griseus OX=10029 GN=XRCC1 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.1e-20
Identity = 70/188 (37.23%), Postives = 101/188 (53.72%), Query Frame = 0


Query: 35  PNRSGSGGTEVMAEAEEPKPGK-GNGEGPVSSSL-HKDFFRLLEGVVFVLSGFVNPERSI 94
           P+RS +        A++  PGK   G  P  +    ++  ++L+GVV VLSGF NP RS 
Sbjct: 280 PSRSPAAAA-ASTPAQKAAPGKPREGTEPRGARAGPQELGKILQGVVVVLSGFQNPFRSE 339

Query: 95  LRSQALEMGAQYKPDWDPDCTLLICAFPNTPKFRQVESDCGTIVSKEWISNCYAQKKLVD 154
           LR +ALE+GA+Y+PDW PD T LICAF NTPK+ QV    G IV KEW+ +CY  ++ + 
Sbjct: 340 LRDKALELGAKYRPDWTPDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCYRLRRRLP 399

Query: 155 IESYLLFAGKPWRRSNLSHEAAQAIPSPSKKPQKPVETTSRLKPNEREITQSREINSSRE 214
              YL+ AG        S    +   SP +  +      SR +P  +  TQ+   +S + 
Sbjct: 400 SRRYLM-AGLG------SSSEDEEDDSPGESGEDEAPKLSRKRPQAKAKTQAAGPSSPQR 459

Query: 215 CFSPLKLK 221
             +P + K
Sbjct: 460 PPTPKETK 459

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BLAST of Tan0017897 vs. NCBI nr
Match: XP_038899733.1 (DNA-repair protein XRCC1 [Benincasa hispida] >XP_038899734.1 DNA-repair protein XRCC1 [Benincasa hispida] >XP_038899736.1 DNA-repair protein XRCC1 [Benincasa hispida])

HSP 1 Score: 634.4 bits (1635), Expect = 6.2e-178
Identity = 325/379 (85.75%), Postives = 346/379 (91.29%), Query Frame = 0


Query: 1   MSYSKANEGGGNAKRSLPSWMSGKDDGSTSRGKKPNRSGSGGTEVMAEAEEPKPGKGNGE 60
           MS SK NEGGGNAKRSLPSWMSGKDDGS+SRGKKPN SGS G +V  EA+EPK  KGNGE
Sbjct: 1   MSDSKTNEGGGNAKRSLPSWMSGKDDGSSSRGKKPNSSGSVGNDV--EAKEPKQEKGNGE 60

Query: 61  GPVSSSLHKDFFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFP 120
           GPVSSSLH+DF RLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDW+ DCTLLICAFP
Sbjct: 61  GPVSSSLHRDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISNCYAQKKLVDIESYLLFAGKPWRRSNLSHEAAQAIPSP 180
           NTPKFRQVESDCGTIVSKEWIS CYAQK+LVDIESYLL+AGKPWRRSNL+ EA QA+PS 
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRSNLAREANQAVPSS 180

Query: 181 SKKPQKPVETTSRLKPNEREITQSREINSSRECFSPLKLKKWAIDDYHKTLSWLESQEEK 240
           SKKPQKPVE  SRLKP+E+EI QSREINSSRECFSPLKLKKWAIDDYHKTLSWLESQEEK
Sbjct: 181 SKKPQKPVEKASRLKPHEQEIAQSREINSSRECFSPLKLKKWAIDDYHKTLSWLESQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHRNQDINQMTEEWKFVPQVVEELAKLSNRKESISK 300
           PDP EIKKIAAEGILTCLQDAIDSLH+NQDINQMTEEWKFVPQVVEELAKL N+KESISK
Sbjct: 241 PDPCEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLGNKKESISK 300

Query: 301 EELFKHARDSKRIYEVELNSLLDNSPERKKKPNISKEPKNGHKETKDMSIAHEYDSDDTI 360
           EEL +HA DSKRIYE+ELNSLLD+S ERKKKPN++KEPKNG K         EYDSDDTI
Sbjct: 301 EELCRHASDSKRIYEIELNSLLDSSTERKKKPNVNKEPKNGRK-------PKEYDSDDTI 360

Query: 361 EMTEEEIDIAFQRVACKKT 380
           EMTE+EIDIAFQ+VACKK+
Sbjct: 361 EMTEDEIDIAFQKVACKKS 370

[Close]

BLAST of Tan0017897 vs. NCBI nr
Match: KAG6575562.1 (DNA-repair protein XRCC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 618.2 bits (1593), Expect = 4.6e-173
Identity = 325/379 (85.75%), Postives = 340/379 (89.71%), Query Frame = 0


Query: 1   MSYSKANEGGGNAKRSLPSWMSGKDDGSTSRGKKPNRSGSGGTEVMAEAEEPKPGKGNGE 60
           MS SKANEGGG AKRSLPSWMSGKDDGSTSRGKKPN S SG  +VMAEAEEP+  K  GE
Sbjct: 1   MSNSKANEGGGIAKRSLPSWMSGKDDGSTSRGKKPNSSCSGQNDVMAEAEEPRQEKIIGE 60

Query: 61  GPVSSSLHKDFFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFP 120
           GPVSSSLH DF RLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDW+ DCTLLICAFP
Sbjct: 61  GPVSSSLHTDFTRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISNCYAQKKLVDIESYLLFAGKPWRRSNLSHEAAQAIPSP 180
           NTPKFRQVESDCGTIVSKEWIS CYAQ+KLVDIESYLL AGKPWRRSN   EA QA P+P
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQRKLVDIESYLLHAGKPWRRSNEPREATQAFPTP 180

Query: 181 SKKPQKPVETTSRLKPNEREITQSREINSSRECFSPLKLKKWAIDDYHKTLSWLESQEEK 240
           SKKPQKPVE  SRLK +E+EI QSREI SSRECFSP KLKKWAIDDYHKTLSWL+SQEEK
Sbjct: 181 SKKPQKPVEKNSRLKSHEQEIAQSREIISSRECFSPSKLKKWAIDDYHKTLSWLDSQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHRNQDINQMTEEWKFVPQVVEELAKLSNRKESISK 300
           PDPSEIKKIAAEGILTCLQDAIDSLH+NQDINQMTEEWKFVPQVVEELAKLS++KESISK
Sbjct: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSSKKESISK 300

Query: 301 EELFKHARDSKRIYEVELNSLLDNSPERKKK-PNISKEPKNGHKETKDMSIAHEYDSDDT 360
           EEL +HA DSKRIYEVELNSLL +SPERKKK PNI+KE KNGHK       A EYDSDDT
Sbjct: 301 EELCRHATDSKRIYEVELNSLLASSPERKKKPPNINKELKNGHK-------AKEYDSDDT 360

Query: 361 IEMTEEEIDIAFQRVACKK 379
           IEMTEEEIDIAFQ+VACKK
Sbjct: 361 IEMTEEEIDIAFQKVACKK 372

[Close]

BLAST of Tan0017897 vs. NCBI nr
Match: XP_022954387.1 (DNA-repair protein XRCC1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 617.5 bits (1591), Expect = 7.9e-173
Identity = 324/379 (85.49%), Postives = 339/379 (89.45%), Query Frame = 0


Query: 1   MSYSKANEGGGNAKRSLPSWMSGKDDGSTSRGKKPNRSGSGGTEVMAEAEEPKPGKGNGE 60
           MS SKANEGGGNAKRSLPSWMSGKD GSTSRGKKPN S SG  +VMAEAEEP+  K  GE
Sbjct: 1   MSNSKANEGGGNAKRSLPSWMSGKDGGSTSRGKKPNSSCSGQNDVMAEAEEPRQEKVIGE 60

Query: 61  GPVSSSLHKDFFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFP 120
           GPVSSSLH DF RLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDW+ DCTLLICAFP
Sbjct: 61  GPVSSSLHTDFTRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISNCYAQKKLVDIESYLLFAGKPWRRSNLSHEAAQAIPSP 180
           NTPKFRQVESDCGTIVSKEWIS CYAQ+KLVDIESYLL AGKPWRRSN   EA QA P+P
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQRKLVDIESYLLHAGKPWRRSNEPREATQAFPTP 180

Query: 181 SKKPQKPVETTSRLKPNEREITQSREINSSRECFSPLKLKKWAIDDYHKTLSWLESQEEK 240
           SKKPQKPVE  SRLK +E+EI QSREI SSRECFSP KLKKWAIDDYHKTLSWL+SQEEK
Sbjct: 181 SKKPQKPVEKNSRLKSHEQEIAQSREIISSRECFSPSKLKKWAIDDYHKTLSWLDSQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHRNQDINQMTEEWKFVPQVVEELAKLSNRKESISK 300
           PDPSEIKKIAAEGILTCLQDAIDSLH+NQDINQMTEEWKFVPQVVEELAKL ++KESISK
Sbjct: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLRSKKESISK 300

Query: 301 EELFKHARDSKRIYEVELNSLLDNSPERKKK-PNISKEPKNGHKETKDMSIAHEYDSDDT 360
           EEL +HA DSKRIYEVELNSLL +SPERKKK PNI+KE KNGHK       A EYDSDDT
Sbjct: 301 EELCRHATDSKRIYEVELNSLLASSPERKKKPPNINKELKNGHK-------AKEYDSDDT 360

Query: 361 IEMTEEEIDIAFQRVACKK 379
           IEMTEEEIDIAFQ+VACKK
Sbjct: 361 IEMTEEEIDIAFQKVACKK 372

[Close]

BLAST of Tan0017897 vs. NCBI nr
Match: XP_016902642.1 (PREDICTED: DNA-repair protein XRCC1 isoform X2 [Cucumis melo])

HSP 1 Score: 616.3 bits (1588), Expect = 1.8e-172
Identity = 319/379 (84.17%), Postives = 338/379 (89.18%), Query Frame = 0


Query: 1   MSYSKANEGGGNAKRSLPSWMSGKDDGSTSRGKKPNRSGSGGTEVMAEAEEPKPGKGNGE 60
           MS SKANEGGG+AKRSLPSWMSGKDDGSTSRGKKPN SGS G ++M EAEEPK  KGNGE
Sbjct: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSGSVGNDLMIEAEEPKQQKGNGE 60

Query: 61  GPVSSSLHKDFFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFP 120
           GPVSSSLH+DF RLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDW+ DCTLLICAFP
Sbjct: 61  GPVSSSLHRDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISNCYAQKKLVDIESYLLFAGKPWRRSNLSHEAAQAIPSP 180
           NTPKFRQVESDCGTIVSKEWIS CYAQK+LVDIESYLL+AGKPWRRS+LSHEA Q IPS 
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRSDLSHEATQDIPSE 180

Query: 181 SKKPQKPVETTSRLKPNEREITQSREINSSRECFSPLKLKKWAIDDYHKTLSWLESQEEK 240
           SKKPQK VE  SR KP+E EI QSR+ N SR+CFSP KLKKWAIDDYHKTLSWLESQEEK
Sbjct: 181 SKKPQKVVEKVSRSKPHESEIAQSRQSNLSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHRNQDINQMTEEWKFVPQVVEELAKLSNRKESISK 300
           PDPSEIKKIAAEGILTCLQDAIDSLH+NQDINQM EEWKFVPQVVEELAKLSN+KESISK
Sbjct: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMIEEWKFVPQVVEELAKLSNKKESISK 300

Query: 301 EELFKHARDSKRIYEVELNSLLDNSPERKKKPNISKEPKNGHKETKDMSIAHEYDSDDTI 360
           +EL +HA DSK IYEVELNSLLD SPERKKK NI KE K G +ETK      EYDSDDTI
Sbjct: 301 DELCRHATDSKSIYEVELNSLLDGSPERKKKGNIKKESKKG-RETK------EYDSDDTI 360

Query: 361 EMTEEEIDIAFQRVACKKT 380
           EMTEEEID+AF +V CK +
Sbjct: 361 EMTEEEIDVAFHKVVCKNS 372

[Close]

BLAST of Tan0017897 vs. NCBI nr
Match: XP_022992302.1 (DNA-repair protein XRCC1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 615.5 bits (1586), Expect = 3.0e-172
Identity = 323/379 (85.22%), Postives = 338/379 (89.18%), Query Frame = 0


Query: 1   MSYSKANEGGGNAKRSLPSWMSGKDDGSTSRGKKPNRSGSGGTEVMAEAEEPKPGKGNGE 60
           MS SKANEGGGNAKRSLPSWMSGKDDGSTSRGKKPN S SG  +VM EAEEP+  K  GE
Sbjct: 1   MSNSKANEGGGNAKRSLPSWMSGKDDGSTSRGKKPNSSCSGQNDVMGEAEEPRQEKVIGE 60

Query: 61  GPVSSSLHKDFFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFP 120
           GPVSSSLH DF RLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDW+  CTLLICAFP
Sbjct: 61  GPVSSSLHTDFTRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSVCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISNCYAQKKLVDIESYLLFAGKPWRRSNLSHEAAQAIPSP 180
           NTPKFRQVESDCGTIVSKEWIS CYAQ+KLVDIESYLL AGKPWRRSN   E  QA P+P
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQRKLVDIESYLLHAGKPWRRSNEPRETTQAFPTP 180

Query: 181 SKKPQKPVETTSRLKPNEREITQSREINSSRECFSPLKLKKWAIDDYHKTLSWLESQEEK 240
           SKKPQKPVE  SRLK +E+EI QSREI SSRECFSP KLKKWAIDDYHKTLSWL+SQEEK
Sbjct: 181 SKKPQKPVEKNSRLKSHEQEIAQSREIISSRECFSPSKLKKWAIDDYHKTLSWLDSQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHRNQDINQMTEEWKFVPQVVEELAKLSNRKESISK 300
           PDPSEIKKIAAEGILTCLQDAIDSLH+NQDINQMTEEWKFVPQVVEELAKLS++KESISK
Sbjct: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSSKKESISK 300

Query: 301 EELFKHARDSKRIYEVELNSLLDNSPERKKK-PNISKEPKNGHKETKDMSIAHEYDSDDT 360
           EEL +HA DSKRIYEVELNSLL +SPERKKK PNI+KE KNGHK       A EYDSDDT
Sbjct: 301 EELCRHATDSKRIYEVELNSLLASSPERKKKPPNINKELKNGHK-------AKEYDSDDT 360

Query: 361 IEMTEEEIDIAFQRVACKK 379
           IEMTEEEIDIAFQ+VACKK
Sbjct: 361 IEMTEEEIDIAFQKVACKK 372

[Close]

BLAST of Tan0017897 vs. ExPASy TrEMBL
Match: A0A6J1GQV2 (DNA-repair protein XRCC1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456640 PE=4 SV=1)

HSP 1 Score: 617.5 bits (1591), Expect = 3.8e-173
Identity = 324/379 (85.49%), Postives = 339/379 (89.45%), Query Frame = 0


Query: 1   MSYSKANEGGGNAKRSLPSWMSGKDDGSTSRGKKPNRSGSGGTEVMAEAEEPKPGKGNGE 60
           MS SKANEGGGNAKRSLPSWMSGKD GSTSRGKKPN S SG  +VMAEAEEP+  K  GE
Sbjct: 1   MSNSKANEGGGNAKRSLPSWMSGKDGGSTSRGKKPNSSCSGQNDVMAEAEEPRQEKVIGE 60

Query: 61  GPVSSSLHKDFFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFP 120
           GPVSSSLH DF RLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDW+ DCTLLICAFP
Sbjct: 61  GPVSSSLHTDFTRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISNCYAQKKLVDIESYLLFAGKPWRRSNLSHEAAQAIPSP 180
           NTPKFRQVESDCGTIVSKEWIS CYAQ+KLVDIESYLL AGKPWRRSN   EA QA P+P
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQRKLVDIESYLLHAGKPWRRSNEPREATQAFPTP 180

Query: 181 SKKPQKPVETTSRLKPNEREITQSREINSSRECFSPLKLKKWAIDDYHKTLSWLESQEEK 240
           SKKPQKPVE  SRLK +E+EI QSREI SSRECFSP KLKKWAIDDYHKTLSWL+SQEEK
Sbjct: 181 SKKPQKPVEKNSRLKSHEQEIAQSREIISSRECFSPSKLKKWAIDDYHKTLSWLDSQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHRNQDINQMTEEWKFVPQVVEELAKLSNRKESISK 300
           PDPSEIKKIAAEGILTCLQDAIDSLH+NQDINQMTEEWKFVPQVVEELAKL ++KESISK
Sbjct: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLRSKKESISK 300

Query: 301 EELFKHARDSKRIYEVELNSLLDNSPERKKK-PNISKEPKNGHKETKDMSIAHEYDSDDT 360
           EEL +HA DSKRIYEVELNSLL +SPERKKK PNI+KE KNGHK       A EYDSDDT
Sbjct: 301 EELCRHATDSKRIYEVELNSLLASSPERKKKPPNINKELKNGHK-------AKEYDSDDT 360

Query: 361 IEMTEEEIDIAFQRVACKK 379
           IEMTEEEIDIAFQ+VACKK
Sbjct: 361 IEMTEEEIDIAFQKVACKK 372

[Close]

BLAST of Tan0017897 vs. ExPASy TrEMBL
Match: A0A1S4E338 (DNA-repair protein XRCC1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499750 PE=4 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 8.5e-173
Identity = 319/379 (84.17%), Postives = 338/379 (89.18%), Query Frame = 0


Query: 1   MSYSKANEGGGNAKRSLPSWMSGKDDGSTSRGKKPNRSGSGGTEVMAEAEEPKPGKGNGE 60
           MS SKANEGGG+AKRSLPSWMSGKDDGSTSRGKKPN SGS G ++M EAEEPK  KGNGE
Sbjct: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSGSVGNDLMIEAEEPKQQKGNGE 60

Query: 61  GPVSSSLHKDFFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFP 120
           GPVSSSLH+DF RLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDW+ DCTLLICAFP
Sbjct: 61  GPVSSSLHRDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISNCYAQKKLVDIESYLLFAGKPWRRSNLSHEAAQAIPSP 180
           NTPKFRQVESDCGTIVSKEWIS CYAQK+LVDIESYLL+AGKPWRRS+LSHEA Q IPS 
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRSDLSHEATQDIPSE 180

Query: 181 SKKPQKPVETTSRLKPNEREITQSREINSSRECFSPLKLKKWAIDDYHKTLSWLESQEEK 240
           SKKPQK VE  SR KP+E EI QSR+ N SR+CFSP KLKKWAIDDYHKTLSWLESQEEK
Sbjct: 181 SKKPQKVVEKVSRSKPHESEIAQSRQSNLSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHRNQDINQMTEEWKFVPQVVEELAKLSNRKESISK 300
           PDPSEIKKIAAEGILTCLQDAIDSLH+NQDINQM EEWKFVPQVVEELAKLSN+KESISK
Sbjct: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMIEEWKFVPQVVEELAKLSNKKESISK 300

Query: 301 EELFKHARDSKRIYEVELNSLLDNSPERKKKPNISKEPKNGHKETKDMSIAHEYDSDDTI 360
           +EL +HA DSK IYEVELNSLLD SPERKKK NI KE K G +ETK      EYDSDDTI
Sbjct: 301 DELCRHATDSKSIYEVELNSLLDGSPERKKKGNIKKESKKG-RETK------EYDSDDTI 360

Query: 361 EMTEEEIDIAFQRVACKKT 380
           EMTEEEID+AF +V CK +
Sbjct: 361 EMTEEEIDVAFHKVVCKNS 372

[Close]

BLAST of Tan0017897 vs. ExPASy TrEMBL
Match: A0A6J1JPF0 (DNA-repair protein XRCC1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488656 PE=4 SV=1)

HSP 1 Score: 615.5 bits (1586), Expect = 1.4e-172
Identity = 323/379 (85.22%), Postives = 338/379 (89.18%), Query Frame = 0


Query: 1   MSYSKANEGGGNAKRSLPSWMSGKDDGSTSRGKKPNRSGSGGTEVMAEAEEPKPGKGNGE 60
           MS SKANEGGGNAKRSLPSWMSGKDDGSTSRGKKPN S SG  +VM EAEEP+  K  GE
Sbjct: 1   MSNSKANEGGGNAKRSLPSWMSGKDDGSTSRGKKPNSSCSGQNDVMGEAEEPRQEKVIGE 60

Query: 61  GPVSSSLHKDFFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFP 120
           GPVSSSLH DF RLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDW+  CTLLICAFP
Sbjct: 61  GPVSSSLHTDFTRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSVCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISNCYAQKKLVDIESYLLFAGKPWRRSNLSHEAAQAIPSP 180
           NTPKFRQVESDCGTIVSKEWIS CYAQ+KLVDIESYLL AGKPWRRSN   E  QA P+P
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQRKLVDIESYLLHAGKPWRRSNEPRETTQAFPTP 180

Query: 181 SKKPQKPVETTSRLKPNEREITQSREINSSRECFSPLKLKKWAIDDYHKTLSWLESQEEK 240
           SKKPQKPVE  SRLK +E+EI QSREI SSRECFSP KLKKWAIDDYHKTLSWL+SQEEK
Sbjct: 181 SKKPQKPVEKNSRLKSHEQEIAQSREIISSRECFSPSKLKKWAIDDYHKTLSWLDSQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHRNQDINQMTEEWKFVPQVVEELAKLSNRKESISK 300
           PDPSEIKKIAAEGILTCLQDAIDSLH+NQDINQMTEEWKFVPQVVEELAKLS++KESISK
Sbjct: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSSKKESISK 300

Query: 301 EELFKHARDSKRIYEVELNSLLDNSPERKKK-PNISKEPKNGHKETKDMSIAHEYDSDDT 360
           EEL +HA DSKRIYEVELNSLL +SPERKKK PNI+KE KNGHK       A EYDSDDT
Sbjct: 301 EELCRHATDSKRIYEVELNSLLASSPERKKKPPNINKELKNGHK-------AKEYDSDDT 360

Query: 361 IEMTEEEIDIAFQRVACKK 379
           IEMTEEEIDIAFQ+VACKK
Sbjct: 361 IEMTEEEIDIAFQKVACKK 372

[Close]

BLAST of Tan0017897 vs. ExPASy TrEMBL
Match: A0A6J1D979 (DNA-repair protein XRCC1 OS=Momordica charantia OX=3673 GN=LOC111018759 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 4.2e-172
Identity = 316/380 (83.16%), Postives = 343/380 (90.26%), Query Frame = 0


Query: 1   MSYSKANEGGGNAKRSLPSWMSGKDDGSTSRGKKPNRSGSGGTEVMAEAEEPKPGKGNGE 60
           MS SK N GGG+AKRSLPSWMSGKDDGSTSRGKKP  SGSGG EV+AEAEE K G GNGE
Sbjct: 1   MSNSKTNLGGGSAKRSLPSWMSGKDDGSTSRGKKPTSSGSGGNEVIAEAEEGKQGSGNGE 60

Query: 61  GPVSSSLHKDFFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFP 120
            P+SSSLH+DF +LLEGVVFVLSGFVNPERSILRSQALEMGAQY+PDW+ DCTLLICAFP
Sbjct: 61  DPISSSLHRDFSKLLEGVVFVLSGFVNPERSILRSQALEMGAQYQPDWNSDCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISNCYAQKKLVDIESYLLFAGKPWRRSNLSHEAAQA-IPS 180
           NTPKFRQVESDCGTIVSKEWIS CYAQKKL+DIES+LL AGKPWRRSNLSHEA QA I S
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISGCYAQKKLIDIESHLLHAGKPWRRSNLSHEARQAKIAS 180

Query: 181 PSKKPQKPVETTSRLKPNEREITQSREINSSRECFSPLKLKKWAIDDYHKTLSWLESQEE 240
            SKKPQKPVE TS LK NE++I+QSR+ NSSRECFSP KLKKWA DDY+KT+SWLESQEE
Sbjct: 181 SSKKPQKPVERTSHLKQNEQDISQSRDNNSSRECFSPPKLKKWATDDYNKTISWLESQEE 240

Query: 241 KPDPSEIKKIAAEGILTCLQDAIDSLHRNQDINQMTEEWKFVPQVVEELAKLSNRKESIS 300
           KPDPSEIKKIAAEGILTCLQDAIDSLH++QDINQ+TEEWKFVPQVVEELAKL ++KESIS
Sbjct: 241 KPDPSEIKKIAAEGILTCLQDAIDSLHQDQDINQVTEEWKFVPQVVEELAKLCSKKESIS 300

Query: 301 KEELFKHARDSKRIYEVELNSLLDNSPERKKKPNISKEPKNGHKETKDMSIAHEYDSDDT 360
           KEEL + A DSK+IYEVELN LLDNSP+RKK+PNISKE KNG KE +D  +A  YDSDDT
Sbjct: 301 KEELRRQAIDSKKIYEVELNFLLDNSPDRKKRPNISKELKNGCKEKEDERVARGYDSDDT 360

Query: 361 IEMTEEEIDIAFQRVACKKT 380
           IEMTEEEID+AFQ VACKKT
Sbjct: 361 IEMTEEEIDLAFQNVACKKT 380

[Close]

BLAST of Tan0017897 vs. ExPASy TrEMBL
Match: A0A0A0KAC1 (BRCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G440580 PE=4 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 2.7e-171
Identity = 317/379 (83.64%), Postives = 336/379 (88.65%), Query Frame = 0


Query: 1   MSYSKANEGGGNAKRSLPSWMSGKDDGSTSRGKKPNRSGSGGTEVMAEAEEPKPGKGNGE 60
           MS SKANEGGG+AKRSLPSWMSGKDDGSTSRGKKPN S S G ++M EAEEPK  KGNGE
Sbjct: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGE 60

Query: 61  GPVSSSLHKDFFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFP 120
           GPVSSSLH DF RLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDW+ DCTLLICAFP
Sbjct: 61  GPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISNCYAQKKLVDIESYLLFAGKPWRRSNLSHEAAQAIPSP 180
           NTPKFRQVESDCGTIVSKEWIS CYAQK+LVDIESYLL+AGKPWRR +LS EA Q IPSP
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP 180

Query: 181 SKKPQKPVETTSRLKPNEREITQSREINSSRECFSPLKLKKWAIDDYHKTLSWLESQEEK 240
           SKKPQ+ VE TS LKP+E EI QSR  N SR+CFSP KLKKWAIDDYHKTLSWLESQEEK
Sbjct: 181 SKKPQRVVEKTSHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHRNQDINQMTEEWKFVPQVVEELAKLSNRKESISK 300
           PDPSEIKKIAAEGILTCLQDAIDSLH+NQDINQMTEEWKFVPQVVEELAKLSN+KESISK
Sbjct: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKKESISK 300

Query: 301 EELFKHARDSKRIYEVELNSLLDNSPERKKKPNISKEPKNGHKETKDMSIAHEYDSDDTI 360
           EEL + A DSK IYEVELNSLL++SPERKKK  + KE KNGH ETK      EYDSDDTI
Sbjct: 301 EELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGH-ETK------EYDSDDTI 360

Query: 361 EMTEEEIDIAFQRVACKKT 380
           EMTEEEID+AF +V CK +
Sbjct: 361 EMTEEEIDVAFHKVVCKNS 372

[Close]

BLAST of Tan0017897 vs. TAIR 10
Match: AT1G80420.1 (BRCT domain-containing DNA repair protein )

HSP 1 Score: 318.9 bits (816), Expect = 5.4e-87
Identity = 193/371 (52.02%), Postives = 242/371 (65.23%), Query Frame = 0


Query: 14  KRSLPSWMSGKD---DGSTSRGKKPNRSGSGGTEVMAEAEEPKPGKGNGEGPVSSSLHKD 73
           KR+LPSWMS +D     S S  KKP     G TE       P       E    SS   +
Sbjct: 4   KRNLPSWMSSRDPEITPSKSHCKKP--KDEGPTEEHNSRNAP---SNKSEHAEPSSNTTE 63

Query: 74  FFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFPNTPKFRQVES 133
           F +L+EGVVFVLSGFVNPERS LRSQAL MGA Y+PDW+   TLLICAFPNTPKFRQVE+
Sbjct: 64  FSKLMEGVVFVLSGFVNPERSTLRSQALTMGATYQPDWNAGSTLLICAFPNTPKFRQVET 123

Query: 134 DCGTIVSKEWISNCYAQKKLVDIESYLLFAGKPWRRSNLSHEA-AQAIPSPSKKPQKPVE 193
           + GTI+SKEWI+ CYAQKKLVDIE YL+ AGKPWR+S+   +A  +     SKKP+K VE
Sbjct: 124 NGGTIISKEWITECYAQKKLVDIEQYLMHAGKPWRKSSSPQDANREKREHLSKKPEKQVE 183

Query: 194 TTSRLKPNEREITQSRE-INSSRECFSPLKLKKWAIDDYHKTLSWLESQEEKPDPSEIKK 253
             +  +      +++R   N  +E F   ++KKWA DD  +T+SWLESQEEKP+P EIK+
Sbjct: 184 KKTETRGTPSTSSKNRSACNLVKEPFFVTEVKKWARDDLSQTISWLESQEEKPEPGEIKR 243

Query: 254 IAAEGILTCLQDAIDSLHRNQDINQMTEEWKFVPQVVEELAKL--SNRKE--SISKEELF 313
           IAAEG+LTCLQDAIDSL + QDI  +TE W FVP+VV+EL K+  S++KE  + SKEE+ 
Sbjct: 244 IAAEGVLTCLQDAIDSLEQKQDIGSVTELWSFVPRVVKELGKMESSSKKENSTASKEEVC 303

Query: 314 KHARDSKRIYEVELNSLLDNSPERKKKPNISKEPKNGHKETKDMSIAHEYDSDDTIEMTE 373
           K A+  K+IYE EL                    K G  E+    +A  YDSD T+EMTE
Sbjct: 304 KQAKSWKKIYEAEL-------------------AKPGEDESTS-RVACGYDSDMTVEMTE 349

Query: 374 EEIDIAFQRVA 376
           EEI++A++ V+
Sbjct: 364 EEIELAYRNVS 349

[Close]

BLAST of Tan0017897 vs. TAIR 10
Match: AT1G80420.2 (BRCT domain-containing DNA repair protein )

HSP 1 Score: 318.9 bits (816), Expect = 5.4e-87
Identity = 193/371 (52.02%), Postives = 242/371 (65.23%), Query Frame = 0


Query: 14  KRSLPSWMSGKD---DGSTSRGKKPNRSGSGGTEVMAEAEEPKPGKGNGEGPVSSSLHKD 73
           KR+LPSWMS +D     S S  KKP     G TE       P       E    SS   +
Sbjct: 4   KRNLPSWMSSRDPEITPSKSHCKKP--KDEGPTEEHNSRNAP---SNKSEHAEPSSNTTE 63

Query: 74  FFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFPNTPKFRQVES 133
           F +L+EGVVFVLSGFVNPERS LRSQAL MGA Y+PDW+   TLLICAFPNTPKFRQVE+
Sbjct: 64  FSKLMEGVVFVLSGFVNPERSTLRSQALTMGATYQPDWNAGSTLLICAFPNTPKFRQVET 123

Query: 134 DCGTIVSKEWISNCYAQKKLVDIESYLLFAGKPWRRSNLSHEA-AQAIPSPSKKPQKPVE 193
           + GTI+SKEWI+ CYAQKKLVDIE YL+ AGKPWR+S+   +A  +     SKKP+K VE
Sbjct: 124 NGGTIISKEWITECYAQKKLVDIEQYLMHAGKPWRKSSSPQDANREKREHLSKKPEKQVE 183

Query: 194 TTSRLKPNEREITQSRE-INSSRECFSPLKLKKWAIDDYHKTLSWLESQEEKPDPSEIKK 253
             +  +      +++R   N  +E F   ++KKWA DD  +T+SWLESQEEKP+P EIK+
Sbjct: 184 KKTETRGTPSTSSKNRSACNLVKEPFFVTEVKKWARDDLSQTISWLESQEEKPEPGEIKR 243

Query: 254 IAAEGILTCLQDAIDSLHRNQDINQMTEEWKFVPQVVEELAKL--SNRKE--SISKEELF 313
           IAAEG+LTCLQDAIDSL + QDI  +TE W FVP+VV+EL K+  S++KE  + SKEE+ 
Sbjct: 244 IAAEGVLTCLQDAIDSLEQKQDIGSVTELWSFVPRVVKELGKMESSSKKENSTASKEEVC 303

Query: 314 KHARDSKRIYEVELNSLLDNSPERKKKPNISKEPKNGHKETKDMSIAHEYDSDDTIEMTE 373
           K A+  K+IYE EL                    K G  E+    +A  YDSD T+EMTE
Sbjct: 304 KQAKSWKKIYEAEL-------------------AKPGEDESTS-RVACGYDSDMTVEMTE 349

Query: 374 EEIDIAFQRVA 376
           EEI++A++ V+
Sbjct: 364 EEIELAYRNVS 349

[Close]

BLAST of Tan0017897 vs. TAIR 10
Match: AT1G80420.3 (BRCT domain-containing DNA repair protein )

HSP 1 Score: 318.9 bits (816), Expect = 5.4e-87
Identity = 193/371 (52.02%), Postives = 242/371 (65.23%), Query Frame = 0


Query: 14  KRSLPSWMSGKD---DGSTSRGKKPNRSGSGGTEVMAEAEEPKPGKGNGEGPVSSSLHKD 73
           KR+LPSWMS +D     S S  KKP     G TE       P       E    SS   +
Sbjct: 4   KRNLPSWMSSRDPEITPSKSHCKKP--KDEGPTEEHNSRNAP---SNKSEHAEPSSNTTE 63

Query: 74  FFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFPNTPKFRQVES 133
           F +L+EGVVFVLSGFVNPERS LRSQAL MGA Y+PDW+   TLLICAFPNTPKFRQVE+
Sbjct: 64  FSKLMEGVVFVLSGFVNPERSTLRSQALTMGATYQPDWNAGSTLLICAFPNTPKFRQVET 123

Query: 134 DCGTIVSKEWISNCYAQKKLVDIESYLLFAGKPWRRSNLSHEA-AQAIPSPSKKPQKPVE 193
           + GTI+SKEWI+ CYAQKKLVDIE YL+ AGKPWR+S+   +A  +     SKKP+K VE
Sbjct: 124 NGGTIISKEWITECYAQKKLVDIEQYLMHAGKPWRKSSSPQDANREKREHLSKKPEKQVE 183

Query: 194 TTSRLKPNEREITQSRE-INSSRECFSPLKLKKWAIDDYHKTLSWLESQEEKPDPSEIKK 253
             +  +      +++R   N  +E F   ++KKWA DD  +T+SWLESQEEKP+P EIK+
Sbjct: 184 KKTETRGTPSTSSKNRSACNLVKEPFFVTEVKKWARDDLSQTISWLESQEEKPEPGEIKR 243

Query: 254 IAAEGILTCLQDAIDSLHRNQDINQMTEEWKFVPQVVEELAKL--SNRKE--SISKEELF 313
           IAAEG+LTCLQDAIDSL + QDI  +TE W FVP+VV+EL K+  S++KE  + SKEE+ 
Sbjct: 244 IAAEGVLTCLQDAIDSLEQKQDIGSVTELWSFVPRVVKELGKMESSSKKENSTASKEEVC 303

Query: 314 KHARDSKRIYEVELNSLLDNSPERKKKPNISKEPKNGHKETKDMSIAHEYDSDDTIEMTE 373
           K A+  K+IYE EL                    K G  E+    +A  YDSD T+EMTE
Sbjct: 304 KQAKSWKKIYEAEL-------------------AKPGEDESTS-RVACGYDSDMTVEMTE 349

Query: 374 EEIDIAFQRVA 376
           EEI++A++ V+
Sbjct: 364 EEIELAYRNVS 349

[Close]

BLAST of Tan0017897 vs. TAIR 10
Match: AT1G80420.4 (BRCT domain-containing DNA repair protein )

HSP 1 Score: 306.2 bits (783), Expect = 3.6e-83
Identity = 188/371 (50.67%), Postives = 235/371 (63.34%), Query Frame = 0


Query: 14  KRSLPSWMSGKD---DGSTSRGKKPNRSGSGGTEVMAEAEEPKPGKGNGEGPVSSSLHKD 73
           KR+LPSWMS +D     S S  KKP     G TE       P       E    SS   +
Sbjct: 4   KRNLPSWMSSRDPEITPSKSHCKKP--KDEGPTEEHNSRNAP---SNKSEHAEPSSNTTE 63

Query: 74  FFRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWDPDCTLLICAFPNTPKFRQVES 133
           F +L+EGVVFVLSGFVNPERS LRSQAL MGA Y+PDW+   TLLICAFPNTPKFRQVE+
Sbjct: 64  FSKLMEGVVFVLSGFVNPERSTLRSQALTMGATYQPDWNAGSTLLICAFPNTPKFRQVET 123

Query: 134 DCGTIVSKEWISNCYAQKKLVDIESYLLFAGKPWRRSNLSHEAAQAIPSPSKKPQKPVET 193
           + GTI+SKEWI+ CYAQKKLVDIE YL+ AGKPWR+S+   +A +             ++
Sbjct: 124 NGGTIISKEWITECYAQKKLVDIEQYLMHAGKPWRKSSSPQDANRE------------KS 183

Query: 194 TSRLKPNEREITQSRE--INSSRECFSPLKLKKWAIDDYHKTLSWLESQEEKPDPSEIKK 253
            S    + R +  S     N  +E F   ++KKWA DD  +T+SWLESQEEKP+P EIK+
Sbjct: 184 FSYCTASLRCLVDSNRSACNLVKEPFFVTEVKKWARDDLSQTISWLESQEEKPEPGEIKR 243

Query: 254 IAAEGILTCLQDAIDSLHRNQDINQMTEEWKFVPQVVEELAKL--SNRKE--SISKEELF 313
           IAAEG+LTCLQDAIDSL + QDI  +TE W FVP+VV+EL K+  S++KE  + SKEE+ 
Sbjct: 244 IAAEGVLTCLQDAIDSLEQKQDIGSVTELWSFVPRVVKELGKMESSSKKENSTASKEEVC 303

Query: 314 KHARDSKRIYEVELNSLLDNSPERKKKPNISKEPKNGHKETKDMSIAHEYDSDDTIEMTE 373
           K A+  K+IYE EL                    K G  E+    +A  YDSD T+EMTE
Sbjct: 304 KQAKSWKKIYEAEL-------------------AKPGEDESTS-RVACGYDSDMTVEMTE 337

Query: 374 EEIDIAFQRVA 376
           EEI++A++ V+
Sbjct: 364 EEIELAYRNVS 337

The following BLAST results are available for this feature:

BLAST of Tan0017897 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q24JK4	7.6e-86	52.02	DNA-repair protein XRCC1 OS=Arabidopsis thaliana OX=3702 GN=XRCC1 PE=1 SV=1	[more]
Q60596	9.1e-23	39.89	DNA repair protein XRCC1 OS=Mus musculus OX=10090 GN=Xrcc1 PE=1 SV=2	[more]
P18887	2.7e-22	41.18	DNA repair protein XRCC1 OS=Homo sapiens OX=9606 GN=XRCC1 PE=1 SV=2	[more]
Q9ESZ0	4.5e-22	35.92	DNA repair protein XRCC1 OS=Rattus norvegicus OX=10116 GN=Xrcc1 PE=1 SV=2	[more]
O54935	1.1e-20	37.23	DNA repair protein XRCC1 OS=Cricetulus griseus OX=10029 GN=XRCC1 PE=2 SV=1	[more]

BLAST of Tan0017897 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899733.1	6.2e-178	85.75	DNA-repair protein XRCC1 [Benincasa hispida] >XP_038899734.1 DNA-repair protein ...	[more]
KAG6575562.1	4.6e-173	85.75	DNA-repair protein XRCC1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022954387.1	7.9e-173	85.49	DNA-repair protein XRCC1 isoform X2 [Cucurbita moschata]	[more]
XP_016902642.1	1.8e-172	84.17	PREDICTED: DNA-repair protein XRCC1 isoform X2 [Cucumis melo]	[more]
XP_022992302.1	3.0e-172	85.22	DNA-repair protein XRCC1 isoform X2 [Cucurbita maxima]	[more]

BLAST of Tan0017897 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQV2	3.8e-173	85.49	DNA-repair protein XRCC1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11145664...	[more]
A0A1S4E338	8.5e-173	84.17	DNA-repair protein XRCC1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499750 PE=4...	[more]
A0A6J1JPF0	1.4e-172	85.22	DNA-repair protein XRCC1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488656 ...	[more]
A0A6J1D979	4.2e-172	83.16	DNA-repair protein XRCC1 OS=Momordica charantia OX=3673 GN=LOC111018759 PE=4 SV=...	[more]
A0A0A0KAC1	2.7e-171	83.64	BRCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G440580 PE=4 S...	[more]

BLAST of Tan0017897 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80420.1	5.4e-87	52.02	BRCT domain-containing DNA repair protein	[more]
AT1G80420.2	5.4e-87	52.02	BRCT domain-containing DNA repair protein	[more]
AT1G80420.3	5.4e-87	52.02	BRCT domain-containing DNA repair protein	[more]
AT1G80420.4	3.6e-83	50.67	BRCT domain-containing DNA repair protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001357	BRCT domain	SMART	SM00292	BRCT_7	coord: 72..148 e-value: 4.0E-7 score: 39.7
IPR001357	BRCT domain	PFAM	PF00533	BRCT	coord: 73..144 e-value: 2.2E-9 score: 37.6
IPR001357	BRCT domain	PROSITE	PS50172	BRCT	coord: 70..158 score: 16.14942
IPR036420	BRCT domain superfamily	GENE3D	3.40.50.10190	BRCT domain	coord: 68..158 e-value: 2.1E-25 score: 91.0
IPR036420	BRCT domain superfamily	SUPERFAMILY	52113	BRCT domain	coord: 70..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	PANTHER	PTHR11370:SF5	DNA REPAIR PROTEIN XRCC1	coord: 65..242
None	No IPR available	PANTHER	PTHR11370	DNA-REPAIR PROTEIN XRCC1	coord: 65..242
IPR045080	XRCC1, first (central) BRCT domain	CDD	cd17725	BRCT_XRCC1_rpt1	coord: 77..156 e-value: 1.27067E-48 score: 154.356

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0017897.1	Tan0017897.1	mRNA
Tan0017897.2	Tan0017897.2	mRNA
Tan0017897.3	Tan0017897.3	mRNA
Tan0017897.4	Tan0017897.4	mRNA
Tan0017897.5	Tan0017897.5	mRNA
Tan0017897.6	Tan0017897.6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006303	double-strand break repair via nonhomologous end joining
biological_process	GO:0000012	single strand break repair
molecular_function	GO:0003684	damaged DNA binding