Tan0017892 (gene) Snake gourd v1

Overview


Name	Tan0017892
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	LG10: 168168 .. 168936 (+)
RNA-Seq Expression	Tan0017892
Synteny	Tan0017892

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCCCCTCCCAAGTCCCACTCCACTCCCCTGTTTAACTCGAACCATGGCAGAAAGAAATCAAGAGCAAGAGAAAGATGATGTCCATAATCAGTACGATTTGAAAGAAGAGAAGAATACAGCAAGATTATGGTCCGGATACTACTCAAAAAACAATCGGCGCTCTGTTTGCGCATGCATCTCCATCTTGCTCCTCATAATTGGTGTGGTGGCACTCACTCTGTGGCTTGTGTACCGCCCCAGTGACCCCCAATTCACGGTGGTTGGAGCGGCAATTTACGATCTCAACATGTCATCTGTGCCCCTGCTGTCCACAACCATGCAATTTACAATCGTTACAAGGAACCCCAACAGGCGAGTTTCCATTTATTATGACAGACTCACTGCCTTTGTGTCGTATAGGAACCAGCAGATAACGTCGCAGGTGAGGCTGCCTCCGCTGTTTCACGAAAAGAGGAGCACAGTTGCCATGTCTCCAGTACTAGGTGGTGGTGGTGGTGCGGTGCCAGTGTCGTTGGAGGTGGCAAATGGGTTAGTGACGGATCAAGCAATTGGAGTTTTAGGGTTGAGAGTAGTGTTGTTGGGTAGATTAAGATGGAAAGCTGGGCCAGTAAAGACTGGACGTTATGCGGTATATGTGAAATGTGACGTATTGGTGGGTGTCAAAACAGCCTTCCTTGGTCAACTTCCCTTGCTTGCTTCTCCCGCTTGCCAAGTTGATATTTAGCTGACAGTGTTTTTACTTTATATATATATATATATATATATA

mRNA sequence

GTTTCCCCTCCCAAGTCCCACTCCACTCCCCTGTTTAACTCGAACCATGGCAGAAAGAAATCAAGAGCAAGAGAAAGATGATGTCCATAATCAGTACGATTTGAAAGAAGAGAAGAATACAGCAAGATTATGGTCCGGATACTACTCAAAAAACAATCGGCGCTCTGTTTGCGCATGCATCTCCATCTTGCTCCTCATAATTGGTGTGGTGGCACTCACTCTGTGGCTTGTGTACCGCCCCAGTGACCCCCAATTCACGGTGGTTGGAGCGGCAATTTACGATCTCAACATGTCATCTGTGCCCCTGCTGTCCACAACCATGCAATTTACAATCGTTACAAGGAACCCCAACAGGCGAGTTTCCATTTATTATGACAGACTCACTGCCTTTGTGTCGTATAGGAACCAGCAGATAACGTCGCAGGTGAGGCTGCCTCCGCTGTTTCACGAAAAGAGGAGCACAGTTGCCATGTCTCCAGTACTAGGTGGTGGTGGTGGTGCGGTGCCAGTGTCGTTGGAGGTGGCAAATGGGTTAGTGACGGATCAAGCAATTGGAGTTTTAGGGTTGAGAGTAGTGTTGTTGGGTAGATTAAGATGGAAAGCTGGGCCAGTAAAGACTGGACGTTATGCGGTATATGTGAAATGTGACGTATTGGTGGGTGTCAAAACAGCCTTCCTTGGTCAACTTCCCTTGCTTGCTTCTCCCGCTTGCCAAGTTGATATTTAGCTGACAGTGTTTTTACTTTATATATATATATATATATATATA

Coding sequence (CDS)

ATGGCAGAAAGAAATCAAGAGCAAGAGAAAGATGATGTCCATAATCAGTACGATTTGAAAGAAGAGAAGAATACAGCAAGATTATGGTCCGGATACTACTCAAAAAACAATCGGCGCTCTGTTTGCGCATGCATCTCCATCTTGCTCCTCATAATTGGTGTGGTGGCACTCACTCTGTGGCTTGTGTACCGCCCCAGTGACCCCCAATTCACGGTGGTTGGAGCGGCAATTTACGATCTCAACATGTCATCTGTGCCCCTGCTGTCCACAACCATGCAATTTACAATCGTTACAAGGAACCCCAACAGGCGAGTTTCCATTTATTATGACAGACTCACTGCCTTTGTGTCGTATAGGAACCAGCAGATAACGTCGCAGGTGAGGCTGCCTCCGCTGTTTCACGAAAAGAGGAGCACAGTTGCCATGTCTCCAGTACTAGGTGGTGGTGGTGGTGCGGTGCCAGTGTCGTTGGAGGTGGCAAATGGGTTAGTGACGGATCAAGCAATTGGAGTTTTAGGGTTGAGAGTAGTGTTGTTGGGTAGATTAAGATGGAAAGCTGGGCCAGTAAAGACTGGACGTTATGCGGTATATGTGAAATGTGACGTATTGGTGGGTGTCAAAACAGCCTTCCTTGGTCAACTTCCCTTGCTTGCTTCTCCCGCTTGCCAAGTTGATATTTAG

Protein sequence

MAERNQEQEKDDVHNQYDLKEEKNTARLWSGYYSKNNRRSVCACISILLLIIGVVALTLWLVYRPSDPQFTVVGAAIYDLNMSSVPLLSTTMQFTIVTRNPNRRVSIYYDRLTAFVSYRNQQITSQVRLPPLFHEKRSTVAMSPVLGGGGGAVPVSLEVANGLVTDQAIGVLGLRVVLLGRLRWKAGPVKTGRYAVYVKCDVLVGVKTAFLGQLPLLASPACQVDI

Homology

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BLAST of Tan0017892 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.2e-23
Identity = 56/166 (33.73%), Postives = 95/166 (57.23%), Query Frame = 0


Query: 41  VCACISILLLIIGVVALTLWLVYRPSDPQFTVVGAAIYDLNMSSVPLLSTTMQFTIVTRN 100
           +C  I   ++I+ +    +W++ +P+ P+F +  A +Y  N+S   LL++  Q TI +RN
Sbjct: 21  ICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRN 80

Query: 101 PNRRVSIYYDRLTAFVSYRNQQITSQVRLPPLFHEKRSTVAMSPVLGGGGGAVPVSLEVA 160
            N R+ IYYDRL  + +YRNQQIT +  +PP +   +     SP +   G +VP++   A
Sbjct: 81  RNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFV--YGNSVPIAPFNA 140

Query: 161 NGLVTDQAIGVLGLRVVLLGRLRWKAGPVKTGRYAVYVKCDVLVGV 207
             L  +Q  G + L +   GR+RWK G + TG+Y ++V+C   + +
Sbjct: 141 VALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINL 184

[Close]

BLAST of Tan0017892 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.6e-22
Identity = 62/176 (35.23%), Postives = 98/176 (55.68%), Query Frame = 0


Query: 31  GYYSKNNRRSVCACISILLLIIGVVALTLWLVYRPSDPQFTVVGAAIYDLNMSSVP--LL 90
           G+  +   R +   I  +L II +  L +W + +PS P+F +  A +Y  N+S  P  LL
Sbjct: 8   GHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLL 67

Query: 91  STTMQFTIVTRNPNRRVSIYYDRLTAFVSYRNQQITSQVRLPPLFHEKRSTVAMSPVLGG 150
           ++  Q T+ +RNPN ++ IYYDRL  + +YR+QQIT    +PP +   +     SP +  
Sbjct: 68  TSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPFV-- 127

Query: 151 GGGAVPVSLEVANGLVTDQAIGVLGLRVVLLGRLRWKAGPVKTGRYAVYVKCDVLV 205
            G +VP++      L TD+  GV+ L +   GR+RWK G   TG+Y ++VKC   +
Sbjct: 128 YGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYI 181

[Close]

BLAST of Tan0017892 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.8e-19
Identity = 65/197 (32.99%), Postives = 106/197 (53.81%), Query Frame = 0


Query: 15  NQYDLKEEKNTARLWSGYYSKNNRR-----SVCACISILLLIIGVVALTLWLVYRPSDPQ 74
           +Q  +   K+ A+   G  + NNR      +     S LLLII +V    WL+  P  P+
Sbjct: 2   SQISITSPKHCAK--KGGININNRHKKLFFTFSTFFSGLLLIIFLV----WLILHPERPE 61

Query: 75  FTVVGAAIYDLNM--SSVPLLSTTMQFTIVTRNPNRRVSIYYDRLTAFVSYRNQQITSQV 134
           F++  A IY LN+  SS  LL++++Q T+ ++NPN++V IYYD+L  + +YR QQITS+ 
Sbjct: 62  FSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEA 121

Query: 135 RLPPLFHEKRSTVAMSPVLGGGGGAVPVSLEVANGLVTDQAIGVLGLRVVLLGRLRWKAG 194
            LPP +        ++  L   G  +PV+      +  +++ G + + + + G+LRWK G
Sbjct: 122 SLPPFYQSHEEINLLTAFL--QGTELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIG 181

Query: 195 PVKTGRYAVYVKCDVLV 205
              +G Y   V C  +V
Sbjct: 182 TWVSGAYRFNVNCLAIV 190

[Close]

BLAST of Tan0017892 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.1e-13
Identity = 53/182 (29.12%), Postives = 88/182 (48.35%), Query Frame = 0


Query: 31  GYYSKNNRRSVCAC--------ISILLLIIGVVALTLWLVYRPSDPQFTVVGAAIYDLNM 90
           GYY + + R    C        I  L++I+GV AL  WL+ RP   +F V  A++   + 
Sbjct: 23  GYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDH 82

Query: 91  SSVP-LLSTTMQFTIVTRNPNRRVSIYYDRLTAFVSYRNQQITSQVRLPPLFHEKRSTVA 150
           +S   +L   +  T+  RNPN+R+ +YYDR+ A   Y  ++  S + L P +   ++T  
Sbjct: 83  TSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRF-STITLTPFYQGHKNTTV 142

Query: 151 MSPVLGGGGGAVPVSLEVANGLVTDQAIGVLGLRVVLLGRLRWKAGPVKTGRYAVYVKCD 204
           ++P    G   V  +   +  L  ++  GV  + +    R+R+K G +K  R    V CD
Sbjct: 143 LTPTF-QGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCD 202

[Close]

BLAST of Tan0017892 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 44/183 (24.04%), Postives = 89/183 (48.63%), Query Frame = 0


Query: 35  KNNRRSVCAC--------ISILLLIIGVVALTLWLVYRPSDPQFTVVGAAIYDLNMSSVP 94
           K   RS C C        + IL+++ G+    L+L+YRP  P++++ G ++  +N++S  
Sbjct: 64  KKTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTS 123

Query: 95  LLSTTMQFTIVTRNPNRRVSIYYDRLTAFVSYRNQQITSQVRLPPLFHEKRSTVAMSPVL 154
            +S +   T+ +RN N ++ +YY++ ++   Y N    S   +P  +   ++   +  VL
Sbjct: 124 PISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVL 183

Query: 155 GGGGGAVPVSLEVANGLVTDQAIGVLGLRVVLLGRLRWKAGPVKTGRYAVYVKCDVLVGV 210
              G  + ++  +   +  + +   +  ++ +   ++ K G VKT    V V CDV V  
Sbjct: 184 --SGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDK 243

[Close]

BLAST of Tan0017892 vs. NCBI nr
Match: XP_008437747.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0048793.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa] >TYK20746.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 365.9 bits (938), Expect = 2.5e-97
Identity = 195/226 (86.28%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 1   MAERNQEQEKDDVHNQYDLKEEKNTARLWSGYYSKNNRRSVCACISILLLIIGVVALTLW 60
           MAERN+EQ  DDVHN+ DLKEEKN AR    YYSK+ RRSVCACISI LLIIGVVALTLW
Sbjct: 1   MAERNEEQ--DDVHNKRDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLW 60

Query: 61  LVYRPSDPQFTVVGAAIYDLNMSSVPLLSTTMQFTIVTRNPNRRVSIYYDRLTAFVSYRN 120
           LVYRP DPQFTVVGAAIYDLNMSS+PLLSTTMQFTIVTRNPNRRVSIYYDRLT FVSYRN
Sbjct: 61  LVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRN 120

Query: 121 QQITSQVRLPPLFHEKRSTVAMSPVLGGGGGAVPVSLEVANGLVTDQAIGVLGLRVVLLG 180
           QQITSQV LPPL HEKRSTVAMSPVL  GGGAV VSLEVANGLVTDQ IGVLGLRVVLLG
Sbjct: 121 QQITSQVILPPLAHEKRSTVAMSPVL--GGGAVAVSLEVANGLVTDQTIGVLGLRVVLLG 180

Query: 181 RLRWKAGPVKTGRYAVYVKCDVLVGVKTAFLGQLPLLASPACQVDI 227
           RLRWKAGP+KTGRYAVYVKCDVL+GVK   +GQLP+LASP C+VDI
Sbjct: 181 RLRWKAGPLKTGRYAVYVKCDVLMGVKRGLVGQLPMLASPPCKVDI 222

[Close]

BLAST of Tan0017892 vs. NCBI nr
Match: XP_038899063.1 (NDR1/HIN1-like protein 12 [Benincasa hispida])

HSP 1 Score: 365.2 bits (936), Expect = 4.2e-97
Identity = 197/227 (86.78%), Postives = 206/227 (90.75%), Query Frame = 0


Query: 1   MAERNQEQEKDDVHNQYDLKEEKNTARLWSGYY-SKNNRRSVCACISILLLIIGVVALTL 60
           MAERN+EQ  DDVHNQ DLKEEK  ARL+S  Y SK+ RRSVCACISI LLIIGVVALTL
Sbjct: 1   MAERNEEQ--DDVHNQRDLKEEKKRARLFSSRYDSKSTRRSVCACISIFLLIIGVVALTL 60

Query: 61  WLVYRPSDPQFTVVGAAIYDLNMSSVPLLSTTMQFTIVTRNPNRRVSIYYDRLTAFVSYR 120
           WLVYRP  PQFTVVGAAIYDLNMSS+PLLSTTMQFTIVTRNPNRRVSIYYDRL AFVSYR
Sbjct: 61  WLVYRPIHPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLIAFVSYR 120

Query: 121 NQQITSQVRLPPLFHEKRSTVAMSPVLGGGGGAVPVSLEVANGLVTDQAIGVLGLRVVLL 180
           NQQITSQV LPPL HEKRSTVAMSPVL  GGGAV VSLEVANGLVTDQAIGVLGLRVVLL
Sbjct: 121 NQQITSQVMLPPLVHEKRSTVAMSPVL--GGGAVAVSLEVANGLVTDQAIGVLGLRVVLL 180

Query: 181 GRLRWKAGPVKTGRYAVYVKCDVLVGVKTAFLGQLPLLASPACQVDI 227
           GRLRWKAGP+KTGRYAVYVKCDVLVGVK   +GQLP+LASPAC+VD+
Sbjct: 181 GRLRWKAGPLKTGRYAVYVKCDVLVGVKRGLVGQLPMLASPACKVDV 223

[Close]

BLAST of Tan0017892 vs. NCBI nr
Match: XP_004133755.1 (NDR1/HIN1-like protein 12 [Cucumis sativus])

HSP 1 Score: 364.4 bits (934), Expect = 7.2e-97
Identity = 194/226 (85.84%), Postives = 203/226 (89.82%), Query Frame = 0


Query: 1   MAERNQEQEKDDVHNQYDLKEEKNTARLWSGYYSKNNRRSVCACISILLLIIGVVALTLW 60
           MAERN+EQ   DVH+Q DLKEEKN AR  S YYSK  RRSVCACISI LL+IGVVALTLW
Sbjct: 1   MAERNEEQ--GDVHDQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLW 60

Query: 61  LVYRPSDPQFTVVGAAIYDLNMSSVPLLSTTMQFTIVTRNPNRRVSIYYDRLTAFVSYRN 120
           LVYRP DPQFTVVGAAIYDLNMSS+PLLSTTMQFTIVTRNPNRRVSIYYDRLT FVSYRN
Sbjct: 61  LVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRN 120

Query: 121 QQITSQVRLPPLFHEKRSTVAMSPVLGGGGGAVPVSLEVANGLVTDQAIGVLGLRVVLLG 180
           QQITSQV LPPL HEKRSTVAMSPVL  GGGAV VSLEVANGLVTDQ IGVLGLRVVLLG
Sbjct: 121 QQITSQVILPPLAHEKRSTVAMSPVL--GGGAVAVSLEVANGLVTDQTIGVLGLRVVLLG 180

Query: 181 RLRWKAGPVKTGRYAVYVKCDVLVGVKTAFLGQLPLLASPACQVDI 227
           RLRWKAGP+KTGRY+VYVKCDVLVGVK   +GQLP+LASP C+VDI
Sbjct: 181 RLRWKAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASPPCKVDI 222

[Close]

BLAST of Tan0017892 vs. NCBI nr
Match: XP_022146145.1 (NDR1/HIN1-like protein 12 [Momordica charantia])

HSP 1 Score: 334.3 bits (856), Expect = 7.9e-88
Identity = 177/227 (77.97%), Postives = 195/227 (85.90%), Query Frame = 0


Query: 1   MAERNQEQEKDDVHNQYDLKEEKNTARLW-SGYYSKNNRRSVCACISILLLIIGVVALTL 60
           MAE  Q Q +D   +Q +LKE K+  R++ S YYSK+  RSVCACISI LL+IGVVAL L
Sbjct: 1   MAEEVQGQGQDQHQHQEELKEAKHRKRIYPSQYYSKSTHRSVCACISIFLLMIGVVALIL 60

Query: 61  WLVYRPSDPQFTVVGAAIYDLNMSSVPLLSTTMQFTIVTRNPNRRVSIYYDRLTAFVSYR 120
           WLVYRP+DPQFTVV AAIYDLNMSS PLLSTTMQFTI+TRNPNRRVSIYYDRLTAFVSYR
Sbjct: 61  WLVYRPTDPQFTVVSAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVSYR 120

Query: 121 NQQITSQVRLPPLFHEKRSTVAMSPVLGGGGGAVPVSLEVANGLVTDQAIGVLGLRVVLL 180
           NQQITSQV LPPLFHEKRST+AMSPVL  GGGAVP SLEV NGLVTDQ IGV+GLRV LL
Sbjct: 121 NQQITSQVMLPPLFHEKRSTLAMSPVL--GGGAVPTSLEVVNGLVTDQTIGVIGLRVALL 180

Query: 181 GRLRWKAGPVKTGRYAVYVKCDVLVGVKTAFLGQLPLLASPACQVDI 227
           GR+RWKAG VKTG Y+VYV+CDVLVGVK   +GQ+PLL SPAC+VDI
Sbjct: 181 GRIRWKAGLVKTGHYSVYVRCDVLVGVKRGLVGQVPLLGSPACKVDI 225

[Close]

BLAST of Tan0017892 vs. NCBI nr
Match: XP_022941246.1 (NDR1/HIN1-like protein 12 [Cucurbita moschata])

HSP 1 Score: 333.2 bits (853), Expect = 1.8e-87
Identity = 181/228 (79.39%), Postives = 196/228 (85.96%), Query Frame = 0


Query: 1   MAERN--QEQEKDDVHNQYDLKEEKNTARLWSGYYSKNNRRSVCACISILLLIIGVVALT 60
           MAER+  QEQ+++ V N  DLKEEK  A   S YY K  RRSVCACISI LLIIGVVALT
Sbjct: 1   MAERDEAQEQKQEHVQNPKDLKEEKKGA---SPYYPKTTRRSVCACISIFLLIIGVVALT 60

Query: 61  LWLVYRPSDPQFTVVGAAIYDLNMSSVPLLSTTMQFTIVTRNPNRRVSIYYDRLTAFVSY 120
           LWLVYRPS PQF VVGAAIY+LN+SS+PLLST MQFTI+TRNPNRRV IYYDRLTAFVSY
Sbjct: 61  LWLVYRPSHPQFKVVGAAIYELNISSLPLLSTRMQFTILTRNPNRRVGIYYDRLTAFVSY 120

Query: 121 RNQQITSQVRLPPLFHEKRSTVAMSPVLGGGGGAVPVSLEVANGLVTDQAIGVLGLRVVL 180
           RNQQIT QV LPPLFHEK+STVAMSPVLGGG  AVP  LEV NGLVTD+AIGV+GLRVVL
Sbjct: 121 RNQQITPQVMLPPLFHEKQSTVAMSPVLGGGAVAVP--LEVGNGLVTDEAIGVVGLRVVL 180

Query: 181 LGRLRWKAGPVKTGRYAVYVKCDVLVGVKTAFLGQLPLLASPACQVDI 227
           LGRLRWKAGPVKTGRYAV VKCDVLVG+K+  +GQ+PLL  PACQVDI
Sbjct: 181 LGRLRWKAGPVKTGRYAVIVKCDVLVGLKSGVVGQVPLLGFPACQVDI 223

[Close]

BLAST of Tan0017892 vs. ExPASy TrEMBL
Match: A0A5D3DAX9 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00030 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.2e-97
Identity = 195/226 (86.28%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 1   MAERNQEQEKDDVHNQYDLKEEKNTARLWSGYYSKNNRRSVCACISILLLIIGVVALTLW 60
           MAERN+EQ  DDVHN+ DLKEEKN AR    YYSK+ RRSVCACISI LLIIGVVALTLW
Sbjct: 1   MAERNEEQ--DDVHNKRDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLW 60

Query: 61  LVYRPSDPQFTVVGAAIYDLNMSSVPLLSTTMQFTIVTRNPNRRVSIYYDRLTAFVSYRN 120
           LVYRP DPQFTVVGAAIYDLNMSS+PLLSTTMQFTIVTRNPNRRVSIYYDRLT FVSYRN
Sbjct: 61  LVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRN 120

Query: 121 QQITSQVRLPPLFHEKRSTVAMSPVLGGGGGAVPVSLEVANGLVTDQAIGVLGLRVVLLG 180
           QQITSQV LPPL HEKRSTVAMSPVL  GGGAV VSLEVANGLVTDQ IGVLGLRVVLLG
Sbjct: 121 QQITSQVILPPLAHEKRSTVAMSPVL--GGGAVAVSLEVANGLVTDQTIGVLGLRVVLLG 180

Query: 181 RLRWKAGPVKTGRYAVYVKCDVLVGVKTAFLGQLPLLASPACQVDI 227
           RLRWKAGP+KTGRYAVYVKCDVL+GVK   +GQLP+LASP C+VDI
Sbjct: 181 RLRWKAGPLKTGRYAVYVKCDVLMGVKRGLVGQLPMLASPPCKVDI 222

[Close]

BLAST of Tan0017892 vs. ExPASy TrEMBL
Match: A0A1S3AVC7 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103483090 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.2e-97
Identity = 195/226 (86.28%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 1   MAERNQEQEKDDVHNQYDLKEEKNTARLWSGYYSKNNRRSVCACISILLLIIGVVALTLW 60
           MAERN+EQ  DDVHN+ DLKEEKN AR    YYSK+ RRSVCACISI LLIIGVVALTLW
Sbjct: 1   MAERNEEQ--DDVHNKRDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLW 60

Query: 61  LVYRPSDPQFTVVGAAIYDLNMSSVPLLSTTMQFTIVTRNPNRRVSIYYDRLTAFVSYRN 120
           LVYRP DPQFTVVGAAIYDLNMSS+PLLSTTMQFTIVTRNPNRRVSIYYDRLT FVSYRN
Sbjct: 61  LVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRN 120

Query: 121 QQITSQVRLPPLFHEKRSTVAMSPVLGGGGGAVPVSLEVANGLVTDQAIGVLGLRVVLLG 180
           QQITSQV LPPL HEKRSTVAMSPVL  GGGAV VSLEVANGLVTDQ IGVLGLRVVLLG
Sbjct: 121 QQITSQVILPPLAHEKRSTVAMSPVL--GGGAVAVSLEVANGLVTDQTIGVLGLRVVLLG 180

Query: 181 RLRWKAGPVKTGRYAVYVKCDVLVGVKTAFLGQLPLLASPACQVDI 227
           RLRWKAGP+KTGRYAVYVKCDVL+GVK   +GQLP+LASP C+VDI
Sbjct: 181 RLRWKAGPLKTGRYAVYVKCDVLMGVKRGLVGQLPMLASPPCKVDI 222

[Close]

BLAST of Tan0017892 vs. ExPASy TrEMBL
Match: A0A0A0L882 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116630 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.5e-97
Identity = 194/226 (85.84%), Postives = 203/226 (89.82%), Query Frame = 0


Query: 1   MAERNQEQEKDDVHNQYDLKEEKNTARLWSGYYSKNNRRSVCACISILLLIIGVVALTLW 60
           MAERN+EQ   DVH+Q DLKEEKN AR  S YYSK  RRSVCACISI LL+IGVVALTLW
Sbjct: 1   MAERNEEQ--GDVHDQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLW 60

Query: 61  LVYRPSDPQFTVVGAAIYDLNMSSVPLLSTTMQFTIVTRNPNRRVSIYYDRLTAFVSYRN 120
           LVYRP DPQFTVVGAAIYDLNMSS+PLLSTTMQFTIVTRNPNRRVSIYYDRLT FVSYRN
Sbjct: 61  LVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRN 120

Query: 121 QQITSQVRLPPLFHEKRSTVAMSPVLGGGGGAVPVSLEVANGLVTDQAIGVLGLRVVLLG 180
           QQITSQV LPPL HEKRSTVAMSPVL  GGGAV VSLEVANGLVTDQ IGVLGLRVVLLG
Sbjct: 121 QQITSQVILPPLAHEKRSTVAMSPVL--GGGAVAVSLEVANGLVTDQTIGVLGLRVVLLG 180

Query: 181 RLRWKAGPVKTGRYAVYVKCDVLVGVKTAFLGQLPLLASPACQVDI 227
           RLRWKAGP+KTGRY+VYVKCDVLVGVK   +GQLP+LASP C+VDI
Sbjct: 181 RLRWKAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASPPCKVDI 222

[Close]

BLAST of Tan0017892 vs. ExPASy TrEMBL
Match: A0A6J1CWG5 (NDR1/HIN1-like protein 12 OS=Momordica charantia OX=3673 GN=LOC111015429 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.8e-88
Identity = 177/227 (77.97%), Postives = 195/227 (85.90%), Query Frame = 0


Query: 1   MAERNQEQEKDDVHNQYDLKEEKNTARLW-SGYYSKNNRRSVCACISILLLIIGVVALTL 60
           MAE  Q Q +D   +Q +LKE K+  R++ S YYSK+  RSVCACISI LL+IGVVAL L
Sbjct: 1   MAEEVQGQGQDQHQHQEELKEAKHRKRIYPSQYYSKSTHRSVCACISIFLLMIGVVALIL 60

Query: 61  WLVYRPSDPQFTVVGAAIYDLNMSSVPLLSTTMQFTIVTRNPNRRVSIYYDRLTAFVSYR 120
           WLVYRP+DPQFTVV AAIYDLNMSS PLLSTTMQFTI+TRNPNRRVSIYYDRLTAFVSYR
Sbjct: 61  WLVYRPTDPQFTVVSAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVSYR 120

Query: 121 NQQITSQVRLPPLFHEKRSTVAMSPVLGGGGGAVPVSLEVANGLVTDQAIGVLGLRVVLL 180
           NQQITSQV LPPLFHEKRST+AMSPVL  GGGAVP SLEV NGLVTDQ IGV+GLRV LL
Sbjct: 121 NQQITSQVMLPPLFHEKRSTLAMSPVL--GGGAVPTSLEVVNGLVTDQTIGVIGLRVALL 180

Query: 181 GRLRWKAGPVKTGRYAVYVKCDVLVGVKTAFLGQLPLLASPACQVDI 227
           GR+RWKAG VKTG Y+VYV+CDVLVGVK   +GQ+PLL SPAC+VDI
Sbjct: 181 GRIRWKAGLVKTGHYSVYVRCDVLVGVKRGLVGQVPLLGSPACKVDI 225

[Close]

BLAST of Tan0017892 vs. ExPASy TrEMBL
Match: A0A6J1FKL2 (NDR1/HIN1-like protein 12 OS=Cucurbita moschata OX=3662 GN=LOC111446584 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 8.6e-88
Identity = 181/228 (79.39%), Postives = 196/228 (85.96%), Query Frame = 0


Query: 1   MAERN--QEQEKDDVHNQYDLKEEKNTARLWSGYYSKNNRRSVCACISILLLIIGVVALT 60
           MAER+  QEQ+++ V N  DLKEEK  A   S YY K  RRSVCACISI LLIIGVVALT
Sbjct: 1   MAERDEAQEQKQEHVQNPKDLKEEKKGA---SPYYPKTTRRSVCACISIFLLIIGVVALT 60

Query: 61  LWLVYRPSDPQFTVVGAAIYDLNMSSVPLLSTTMQFTIVTRNPNRRVSIYYDRLTAFVSY 120
           LWLVYRPS PQF VVGAAIY+LN+SS+PLLST MQFTI+TRNPNRRV IYYDRLTAFVSY
Sbjct: 61  LWLVYRPSHPQFKVVGAAIYELNISSLPLLSTRMQFTILTRNPNRRVGIYYDRLTAFVSY 120

Query: 121 RNQQITSQVRLPPLFHEKRSTVAMSPVLGGGGGAVPVSLEVANGLVTDQAIGVLGLRVVL 180
           RNQQIT QV LPPLFHEK+STVAMSPVLGGG  AVP  LEV NGLVTD+AIGV+GLRVVL
Sbjct: 121 RNQQITPQVMLPPLFHEKQSTVAMSPVLGGGAVAVP--LEVGNGLVTDEAIGVVGLRVVL 180

Query: 181 LGRLRWKAGPVKTGRYAVYVKCDVLVGVKTAFLGQLPLLASPACQVDI 227
           LGRLRWKAGPVKTGRYAV VKCDVLVG+K+  +GQ+PLL  PACQVDI
Sbjct: 181 LGRLRWKAGPVKTGRYAVIVKCDVLVGLKSGVVGQVPLLGFPACQVDI 223

[Close]

BLAST of Tan0017892 vs. TAIR 10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 216.1 bits (549), Expect = 2.9e-56
Identity = 105/189 (55.56%), Postives = 145/189 (76.72%), Query Frame = 0


Query: 38  RRSVCACISILLLIIGVVALTLWLVYRPSDPQFTVVGAAIYDLNMSSVPLLSTTMQFTIV 97
           RR++C  I  +L+I+G++AL LWLVYRP  P+ TVVGAAIYDLN ++ PL+ST++QF+++
Sbjct: 41  RRAICGAIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVL 100

Query: 98  TRNPNRRVSIYYDRLTAFVSYRNQQITSQVRLPPLFHEKRSTVAMSPVLGGGGGAVPVSL 157
            RNPNRRVSI+YD+L+ +V+Y++Q IT  + LPPL    +STV ++PV+GG G  +PVS 
Sbjct: 101 ARNPNRRVSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGGNG--IPVSP 160

Query: 158 EVANGLVTDQAIGVLGLRVVLLGRLRWKAGPVKTGRYAVYVKCDVLVGVKTAFLGQLPLL 217
           EVANGL  D+A GV+ +RVV+ GRLRWKAG +KTGRY  Y +CDV +    +  GQ+PLL
Sbjct: 161 EVANGLKNDEAYGVVLMRVVIFGRLRWKAGAIKTGRYGFYARCDVWLRFNPSSNGQVPLL 220

Query: 218 ASPACQVDI 227
           A   C+VD+
Sbjct: 221 APSTCKVDV 227

[Close]

BLAST of Tan0017892 vs. TAIR 10
Match: AT5G06330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 120.6 bits (301), Expect = 1.7e-27
Identity = 72/198 (36.36%), Postives = 114/198 (57.58%), Query Frame = 0


Query: 33  YSKNNRRSVCACISILLLIIGVVALTLWLVYRPSDPQFTVVGAAIYDLNMSSVP--LLST 92
           +S  NR+ V   ISI+LL+I VV L +W + +PS P+F +  A +++ N+S  P  LL++
Sbjct: 12  HSSCNRKIVIWTISIILLLILVVILLVWAILQPSKPRFVLQDATVFNFNVSGNPPNLLTS 71

Query: 93  TMQFTIVTRNPNRRVSIYYDRLTAFVSYRNQQITSQVRLPPLFHEKRSTVAMSPVLGGGG 152
             QFT+ +RNPN ++ IYYDRL  + SYR+QQIT    +   +   +     SP +  GG
Sbjct: 72  NFQFTLSSRNPNDKIGIYYDRLDVYASYRSQQITLPSPMLTTYQGHKEVNVWSPFV--GG 131

Query: 153 GAVPVSLEVANGLVTDQAIGVLGLRVVLLGRLRWKAGPVKTGRYAVYVKCDVLVGVKTAF 212
            +VPV+   A  L  D + G + L + L GR+RWK G   TG+Y ++V+C  L+   ++ 
Sbjct: 132 YSVPVAPYNAFYLDQDHSSGAIMLMLHLDGRVRWKVGSFITGKYHLHVRCHALINFGSSA 191

Query: 213 LGQL--PLLASPACQVDI 227
            G +    + +  C V +
Sbjct: 192 AGVIVGKYMLTETCSVSV 207

[Close]

BLAST of Tan0017892 vs. TAIR 10
Match: AT3G52470.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 113.6 bits (283), Expect = 2.1e-25
Identity = 58/176 (32.95%), Postives = 98/176 (55.68%), Query Frame = 0


Query: 39  RSVCACISILLLIIGVVALTLWLVYRPSDPQFTVVGAAIYDLNMSSVPLLSTTMQFTIVT 98
           R +CA I   ++I+ +    +W++ RP+ P+F +  A +Y  N+S   LL++  Q TI +
Sbjct: 17  RKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQVTIAS 76

Query: 99  RNPNRRVSIYYDRLTAFVSYRNQQITSQVRLPPLFHEKRSTVAMSPVLGGGGGAVPVSLE 158
           RNPN ++ IYYDRL  + +Y NQQIT +  +PP +   +     SP +   G AVP++  
Sbjct: 77  RNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWSPFV--YGTAVPIAPY 136

Query: 159 VANGLVTDQAIGVLGLRVVLLGRLRWKAGPVKTGRYAVYVKCDVLVGVKTAFLGQL 215
            +  L  ++  G +GL +   G +RWK   + TG+Y ++V+C   + +     G L
Sbjct: 137 NSVALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFINLGNKAAGVL 190

[Close]

BLAST of Tan0017892 vs. TAIR 10
Match: AT2G35960.1 (NDR1/HIN1-like 12 )

HSP 1 Score: 109.8 bits (273), Expect = 3.0e-24
Identity = 56/166 (33.73%), Postives = 95/166 (57.23%), Query Frame = 0


Query: 41  VCACISILLLIIGVVALTLWLVYRPSDPQFTVVGAAIYDLNMSSVPLLSTTMQFTIVTRN 100
           +C  I   ++I+ +    +W++ +P+ P+F +  A +Y  N+S   LL++  Q TI +RN
Sbjct: 21  ICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRN 80

Query: 101 PNRRVSIYYDRLTAFVSYRNQQITSQVRLPPLFHEKRSTVAMSPVLGGGGGAVPVSLEVA 160
            N R+ IYYDRL  + +YRNQQIT +  +PP +   +     SP +   G +VP++   A
Sbjct: 81  RNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFV--YGNSVPIAPFNA 140

Query: 161 NGLVTDQAIGVLGLRVVLLGRLRWKAGPVKTGRYAVYVKCDVLVGV 207
             L  +Q  G + L +   GR+RWK G + TG+Y ++V+C   + +
Sbjct: 141 VALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINL 184

[Close]

BLAST of Tan0017892 vs. TAIR 10
Match: AT4G09590.1 (NDR1/HIN1-like 22 )

HSP 1 Score: 108.6 bits (270), Expect = 6.6e-24
Identity = 56/164 (34.15%), Postives = 90/164 (54.88%), Query Frame = 0


Query: 41  VCACISILLLIIGVVALTLWLVYRPSDPQFTVVGAAIYDLNMSSVPLLSTTMQFTIVTRN 100
           +C  I   ++I+ +    +W++ +P +P+F +    +Y  N+S   LL++  Q TI +RN
Sbjct: 22  ICGAIIGFIIIVLMTIFLVWIILQPKNPEFILQDTTVYAFNLSQPNLLTSKFQITIASRN 81

Query: 101 PNRRVSIYYDRLTAFVSYRNQQITSQVRLPPLFHEKRSTVAMSPVLGGGGGAVPVSLEVA 160
            N  + IYYD L A+ SYRNQQIT    LPP +   +     SP+L   G  VP++   A
Sbjct: 82  RNSNIGIYYDHLHAYASYRNQQITLASDLPPTYQRHKEDSVWSPLL--YGNQVPIAPFNA 141

Query: 161 NGLVTDQAIGVLGLRVVLLGRLRWKAGPVKTGRYAVYVKCDVLV 205
             L  +Q  GV  L + + G++RWK G +  G Y ++V+C   +
Sbjct: 142 VALGDEQNSGVFTLTICVDGQVRWKVGTLTIGNYHLHVRCQAFI 183

The following BLAST results are available for this feature:

BLAST of Tan0017892 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ54	4.2e-23	33.73	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9SRN0	1.6e-22	35.23	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
Q9FI03	2.8e-19	32.99	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9SJ52	5.1e-13	29.12	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9ZVD2	1.1e-10	24.04	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]

BLAST of Tan0017892 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437747.1	2.5e-97	86.28	PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0048793.1 NDR1/HIN1-like...	[more]
XP_038899063.1	4.2e-97	86.78	NDR1/HIN1-like protein 12 [Benincasa hispida]	[more]
XP_004133755.1	7.2e-97	85.84	NDR1/HIN1-like protein 12 [Cucumis sativus]	[more]
XP_022146145.1	7.9e-88	77.97	NDR1/HIN1-like protein 12 [Momordica charantia]	[more]
XP_022941246.1	1.8e-87	79.39	NDR1/HIN1-like protein 12 [Cucurbita moschata]	[more]

BLAST of Tan0017892 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DAX9	1.2e-97	86.28	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3AVC7	1.2e-97	86.28	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103483090 PE=4 SV=1	[more]
A0A0A0L882	3.5e-97	85.84	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116630 PE=4 ...	[more]
A0A6J1CWG5	3.8e-88	77.97	NDR1/HIN1-like protein 12 OS=Momordica charantia OX=3673 GN=LOC111015429 PE=4 SV...	[more]
A0A6J1FKL2	8.6e-88	79.39	NDR1/HIN1-like protein 12 OS=Cucurbita moschata OX=3662 GN=LOC111446584 PE=4 SV=...	[more]

BLAST of Tan0017892 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01410.1	2.9e-56	55.56	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06330.1	1.7e-27	36.36	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G52470.1	2.1e-25	32.95	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35960.1	3.0e-24	33.73	NDR1/HIN1-like 12	[more]
AT4G09590.1	6.6e-24	34.15	NDR1/HIN1-like 22	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 3..23
None	No IPR available	PANTHER	PTHR31415:SF62	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 29..225
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 99..200 e-value: 2.3E-8 score: 34.5
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 29..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0017892.1	Tan0017892.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma