Tan0017876 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCATCAGTTTCCAATTCCAAAGCTTAAATACAAAACCCCACAAAATTTTTATTTTCAGGGCTGCTCTCAGTTTATGACCTATTTTTCTGAGATACTGGACAAGAGGTTTTCTTTTCCAAGCATTAGGGACTTCTTTTGCTCTCCAAAGCTTTGGAAATGTATGCTGAAACTGAGCATTTGCTTCCTTATTTCCAAAATTACTCTGAATTAGCAAAGGATTTCTGCAAAACCCACAAGCTTGATTCTCCATTGGTAATCTCTCTTTCTCTCTACTCTCTCTTCTTTCTCATTTTTGGCTGTTGGGCTGCATTTTTTTGGATGATTATGAACTGGGTTTGAGTTCAAACTTGCTATTGCTTTAGTTTTTGATCTTGACTCTGTGTTTTGGTAGTTGTTTGTTGTAACTTGGTTATGCTATCCACTGTTTGGTTCCTGAGAAAATGGGAAAGAAAAACTCAGAAAATGCTTGCTCTGTTACCACTGTATCTGAGTTACCTCAAAGTGCAAAGGGAAGTAGTTTGAGTTTGCTTTACATGCTGGATCTGGAAAAGGATGGGTGAAAAAGGCAAAGAAAAGGAGAGTGAAAGAGAGAAGAGTTTCTTTTAAGTTCCCTGCTTCAATCATTCTTCCTTTTTTTCACTCATCTTTTTTGTTGAACTCATTATTCTACTTTTCTTTTGCTTAACCTTCATGGAAAAGAATTTTAAGAAAGCACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTAACCCACTTTTTCTTTTGTTATAAGAATATGTTGGGAAGGAAGAGAGGAAAATGGCCAGAGAAAGCTGGTGGTACTCAGCTTCTTTTGCTTAAAGAGATTTCTAGTGATGGAAGATTGCCTGTTGTATTTGGTAATGTTTGTTAATGAGAGCATGTTTAACATAAGATATCTGCAAACCCTCAGTTTTATAGTGCCAAAAGGCAGTTCTCAGCAGAGCTTTTCCACAACTTTTTTTTAGTATAAATAGTTAGCCCTAGTATCAATATTCTTTGTTTTTCTACTTTACTTTTCTCCAATGATTTCTGTTAATTTGGCTGAATTTTACAGGATCCTCTTAACTTACATCTACCTTTACATTCAAATAATTTTTATTCCTTATCTTTTCCTCATAGAATATGTTCACCTGTTACCCCTTAAATGAGTTGCTCTTTTTGCCTTGGAACCATGAAATTTTGTTTAAAACAACACTTGTATTTGGTATTTTGTAGGTAGCATCATTAGGCATTAGTTTGATTTTTTCTTTTGATTAAAGTCAGCTGCAAAAGAGCTCTTGTTACTTTTTCCACCCTCATATTGGTTGGTTTTCTTCTAATGCAGAGCAACATGGTTCAGACATCAACTGTATGTGAATACAACATGGGCGGTGAAGGCGACCTATTCAAAGCCCCAGAGCCAATCATCGAGGAATCGTTTTCGGGTCTCAATCCTATGATGGCTGCAATTTCAATGATGTCTTGCGGCAACACCAACATCTCCTTGGAGGGACTTAAAGATGCAGATTTTTTTTTTAGTTCAAAAGATGCAGATTTACTTCAAAATGATCAGCTCTTGAGTGAGGTTTACTATGAGTGTGAGAAGGATCTTTTAGAGAAAGGAGCAATGCAAACACCGCTGTCTGAAGTTCTCGATCTTAAGAATCAAACGTTGAAGACGGACGAACTCCAAATTCCAGAAAACAAACCAGTTTCTGATGCAACACTTCAGAAGAGTGTTAGCTCAGGATGCTTAAGGTCAATGGACTGGATGCAAGGCCCTGCAATGAAGTCCAGTCTTATGGATTTTAGCGGAGTGGATATCAGTGAGGTCTACGGGATGCGGCGGGCATTTAGCGAAGGCGATATCAAGGTCAGACTTCATTTCTAATCTAGTTATCAGAAGTTCCTTATATGTTCTTGAGGTATTTAACGTTTTTGAACCAGAGCATTCACAAATTTGATTAAAAAACTGACACGGGAAGAACATTCATGACTCGAGTACATTGACAAATATTCAGAATCTCAGATAAACTCTTGAAAGGCTGAATGATATAGAAATGTATGCTGTCTTTAATCATTTTCACAAGTTGGGGTTTTGTCATTGATTCTAGACTTCTGCTGCAGACTCTTAGTAATGGCAATGGGAGCCAATTCCATTCTCCTCTTGAGCGGCCGCTGCTGGTAAGCAATTGCACTGCTGAAGAACGCAAAGAAAAGCTCTCAAGATACCGAAATAAGAAGACAAAAAGGAACTTTGGCAGAAAGATCAAGGTAATTAATTTATACGAGAATCAATATTCAGTAAGCATGTTGAACAAGTTAACTTACAAAAAAAACTGTCAAAATTTCGAGTTAGTCAAACCTCGAAGGTCTGTTCACTTCTTTCAATGGGTTCTGACTGTTTACACACTGTATTTGTTACAAAAAAATCTTCAAAATACAACAATATCTTGAATTCGTGCATGTTAGATATATTATGATAGGATATTCATGTCATTAAACATCTAGGCGTCGTCTTTAAATCTATAAGCTCGATAGCGTCGTGAAAACTTCCAAGACTTGACAAAGTAGCCTTTGAGATCATAAGATGAAAAGGCTAAAAACAGCAGGGTTTTTGTTGTCAGTATGCTTGCAGAAAGGCTCTGGCTGACAGTCAACCAAGAATCAGAGGAAGGTTTGCCAAGACTGAAGAATCTGAGATTAAGAGGCAATGATAGATATTATGAAGGAAAAGCAGAGGTTAGAAGAAGGATCTGAATCTGCAATTAGTTTGTTTAGAAGGGCTGAAATGAAATGTACTGTAGAAGATAGATTTGTAAATAGTGTTTGCTTAATAAAAACAAAAAGAAGAAGCAGAAGTTGTTTTGTTCATAGTAGTGCTGCTCTGTATTTGTTGATGTTTGTATTTTCTAATTCAAGTGTTATGATCTGTATCAATTACAGTTCTAATTATGCCTACTAATAACATTGTCTCAAACAATGTTCTACTTCATCTTATTTCAAGCTTGTGATTTCAACTCAAAACTAAATCTCACTGTAAAGATGAGTTCTCCAAGGAGACTCTTCTAAGTAAGGCTCACAAGTTTCATTGTAAATATTTGTATTTTATTAACATTTTTGTAAATATTAACTCTCTT CCATCAGTTTCCAATTCCAAAGCTTAAATACAAAACCCCACAAAATTTTTATTTTCAGGGCTGCTCTCAGTTTATGACCTATTTTTCTGAGATACTGGACAAGAGGTTTTCTTTTCCAAGCATTAGGGACTTCTTTTGCTCTCCAAAGCTTTGGAAATGTATGCTGAAACTGAGCATTTGCTTCCTTATTTCCAAAATTACTCTGAATTAGCAAAGGATTTCTGCAAAACCCACAAGCTTGATTCTCCATTGAGCAACATGGTTCAGACATCAACTGTATGTGAATACAACATGGGCGGTGAAGGCGACCTATTCAAAGCCCCAGAGCCAATCATCGAGGAATCGTTTTCGGGTCTCAATCCTATGATGGCTGCAATTTCAATGATGTCTTGCGGCAACACCAACATCTCCTTGGAGGGACTTAAAGATGCAGATTTTTTTTTTAGTTCAAAAGATGCAGATTTACTTCAAAATGATCAGCTCTTGAGTGAGGTTTACTATGAGTGTGAGAAGGATCTTTTAGAGAAAGGAGCAATGCAAACACCGCTGTCTGAAGTTCTCGATCTTAAGAATCAAACGTTGAAGACGGACGAACTCCAAATTCCAGAAAACAAACCAGTTTCTGATGCAACACTTCAGAAGAGTGTTAGCTCAGGATGCTTAAGGTCAATGGACTGGATGCAAGGCCCTGCAATGAAGTCCAGTCTTATGGATTTTAGCGGAGTGGATATCAGTGAGGTCTACGGGATGCGGCGGGCATTTAGCGAAGGCGATATCAAGACTCTTAGTAATGGCAATGGGAGCCAATTCCATTCTCCTCTTGAGCGGCCGCTGCTGGTAAGCAATTGCACTGCTGAAGAACGCAAAGAAAAGCTCTCAAGATACCGAAATAAGAAGACAAAAAGGAACTTTGGCAGAAAGATCAAGTATGCTTGCAGAAAGGCTCTGGCTGACAGTCAACCAAGAATCAGAGGAAGGTTTGCCAAGACTGAAGAATCTGAGATTAAGAGGCAATGATAGATATTATGAAGGAAAAGCAGAGGTTAGAAGAAGGATCTGAATCTGCAATTAGTTTGTTTAGAAGGGCTGAAATGAAATGTACTGTAGAAGATAGATTTGTAAATAGTGTTTGCTTAATAAAAACAAAAAGAAGAAGCAGAAGTTGTTTTGTTCATAGTAGTGCTGCTCTGTATTTGTTGATGTTTGTATTTTCTAATTCAAGTGTTATGATCTGTATCAATTACAGTTCTAATTATGCCTACTAATAACATTGTCTCAAACAATGTTCTACTTCATCTTATTTCAAGCTTGTGATTTCAACTCAAAACTAAATCTCACTGTAAAGATGAGTTCTCCAAGGAGACTCTTCTAAGTAAGGCTCACAAGTTTCATTGTAAATATTTGTATTTTATTAACATTTTTGTAAATATTAACTCTCTT ATGTATGCTGAAACTGAGCATTTGCTTCCTTATTTCCAAAATTACTCTGAATTAGCAAAGGATTTCTGCAAAACCCACAAGCTTGATTCTCCATTGAGCAACATGGTTCAGACATCAACTGTATGTGAATACAACATGGGCGGTGAAGGCGACCTATTCAAAGCCCCAGAGCCAATCATCGAGGAATCGTTTTCGGGTCTCAATCCTATGATGGCTGCAATTTCAATGATGTCTTGCGGCAACACCAACATCTCCTTGGAGGGACTTAAAGATGCAGATTTTTTTTTTAGTTCAAAAGATGCAGATTTACTTCAAAATGATCAGCTCTTGAGTGAGGTTTACTATGAGTGTGAGAAGGATCTTTTAGAGAAAGGAGCAATGCAAACACCGCTGTCTGAAGTTCTCGATCTTAAGAATCAAACGTTGAAGACGGACGAACTCCAAATTCCAGAAAACAAACCAGTTTCTGATGCAACACTTCAGAAGAGTGTTAGCTCAGGATGCTTAAGGTCAATGGACTGGATGCAAGGCCCTGCAATGAAGTCCAGTCTTATGGATTTTAGCGGAGTGGATATCAGTGAGGTCTACGGGATGCGGCGGGCATTTAGCGAAGGCGATATCAAGACTCTTAGTAATGGCAATGGGAGCCAATTCCATTCTCCTCTTGAGCGGCCGCTGCTGGTAAGCAATTGCACTGCTGAAGAACGCAAAGAAAAGCTCTCAAGATACCGAAATAAGAAGACAAAAAGGAACTTTGGCAGAAAGATCAAGTATGCTTGCAGAAAGGCTCTGGCTGACAGTCAACCAAGAATCAGAGGAAGGTTTGCCAAGACTGAAGAATCTGAGATTAAGAGGCAATGA MYAETEHLLPYFQNYSELAKDFCKTHKLDSPLSNMVQTSTVCEYNMGGEGDLFKAPEPIIEESFSGLNPMMAAISMMSCGNTNISLEGLKDADFFFSSKDADLLQNDQLLSEVYYECEKDLLEKGAMQTPLSEVLDLKNQTLKTDELQIPENKPVSDATLQKSVSSGCLRSMDWMQGPAMKSSLMDFSGVDISEVYGMRRAFSEGDIKTLSNGNGSQFHSPLERPLLVSNCTAEERKEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESEIKRQ Homology
BLAST of Tan0017876 vs. ExPASy Swiss-Prot
Match: O82117 (Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.4e-07 Identity = 43/127 (33.86%), Postives = 71/127 (55.91%), Query Frame = 0
BLAST of Tan0017876 vs. ExPASy Swiss-Prot
Match: Q96502 (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05 Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 0
BLAST of Tan0017876 vs. ExPASy Swiss-Prot
Match: E5RQA1 (Transcription factor GHD7 OS=Oryza sativa subsp. japonica OX=39947 GN=GHD7 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.8e-05 Identity = 25/48 (52.08%), Postives = 36/48 (75.00%), Query Frame = 0
BLAST of Tan0017876 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2) HSP 1 Score: 50.1 bits (118), Expect = 5.0e-05 Identity = 25/48 (52.08%), Postives = 36/48 (75.00%), Query Frame = 0
BLAST of Tan0017876 vs. ExPASy Swiss-Prot
Match: O23379 (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN=COL11 PE=1 SV=2) HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04 Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of Tan0017876 vs. NCBI nr
Match: XP_022973053.1 (uncharacterized protein LOC111471557 isoform X1 [Cucurbita maxima]) HSP 1 Score: 488.0 bits (1255), Expect = 5.4e-134 Identity = 250/283 (88.34%), Postives = 265/283 (93.64%), Query Frame = 0
BLAST of Tan0017876 vs. NCBI nr
Match: KAG7035748.1 (Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 486.1 bits (1250), Expect = 2.1e-133 Identity = 252/286 (88.11%), Postives = 266/286 (93.01%), Query Frame = 0
BLAST of Tan0017876 vs. NCBI nr
Match: XP_004145929.1 (two-component response regulator-like APRR7 isoform X1 [Cucumis sativus] >KGN49867.1 hypothetical protein Csa_000185 [Cucumis sativus]) HSP 1 Score: 484.6 bits (1246), Expect = 6.0e-133 Identity = 248/287 (86.41%), Postives = 265/287 (92.33%), Query Frame = 0
BLAST of Tan0017876 vs. NCBI nr
Match: XP_038876024.1 (uncharacterized protein LOC120068360 [Benincasa hispida]) HSP 1 Score: 484.2 bits (1245), Expect = 7.8e-133 Identity = 251/289 (86.85%), Postives = 265/289 (91.70%), Query Frame = 0
BLAST of Tan0017876 vs. NCBI nr
Match: KAG6605780.1 (Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 484.2 bits (1245), Expect = 7.8e-133 Identity = 251/286 (87.76%), Postives = 265/286 (92.66%), Query Frame = 0
BLAST of Tan0017876 vs. ExPASy TrEMBL
Match: A0A6J1IBX4 (uncharacterized protein LOC111471557 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471557 PE=4 SV=1) HSP 1 Score: 488.0 bits (1255), Expect = 2.6e-134 Identity = 250/283 (88.34%), Postives = 265/283 (93.64%), Query Frame = 0
BLAST of Tan0017876 vs. ExPASy TrEMBL
Match: A0A0A0KN81 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139450 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 2.9e-133 Identity = 248/287 (86.41%), Postives = 265/287 (92.33%), Query Frame = 0
BLAST of Tan0017876 vs. ExPASy TrEMBL
Match: A0A1S3AU23 (two-component response regulator-like APRR7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482962 PE=4 SV=1) HSP 1 Score: 484.2 bits (1245), Expect = 3.8e-133 Identity = 249/287 (86.76%), Postives = 265/287 (92.33%), Query Frame = 0
BLAST of Tan0017876 vs. ExPASy TrEMBL
Match: A0A5A7TH31 (Two-component response regulator-like APRR7 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00500 PE=4 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 5.0e-133 Identity = 248/287 (86.41%), Postives = 265/287 (92.33%), Query Frame = 0
BLAST of Tan0017876 vs. ExPASy TrEMBL
Match: A0A6J1K969 (two-component response regulator-like PRR37 OS=Cucurbita maxima OX=3661 GN=LOC111491250 PE=4 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 1.1e-132 Identity = 251/286 (87.76%), Postives = 265/286 (92.66%), Query Frame = 0
BLAST of Tan0017876 vs. TAIR 10
Match: AT5G53420.1 (CCT motif family protein ) HSP 1 Score: 224.6 bits (571), Expect = 1.0e-58 Identity = 136/285 (47.72%), Postives = 187/285 (65.61%), Query Frame = 0
BLAST of Tan0017876 vs. TAIR 10
Match: AT4G27900.1 (CCT motif family protein ) HSP 1 Score: 216.9 bits (551), Expect = 2.2e-56 Identity = 140/290 (48.28%), Postives = 180/290 (62.07%), Query Frame = 0
BLAST of Tan0017876 vs. TAIR 10
Match: AT4G27900.2 (CCT motif family protein ) HSP 1 Score: 216.9 bits (551), Expect = 2.2e-56 Identity = 140/290 (48.28%), Postives = 180/290 (62.07%), Query Frame = 0
BLAST of Tan0017876 vs. TAIR 10
Match: AT5G53420.2 (CCT motif family protein ) HSP 1 Score: 171.8 bits (434), Expect = 8.0e-43 Identity = 107/206 (51.94%), Postives = 136/206 (66.02%), Query Frame = 0
BLAST of Tan0017876 vs. TAIR 10
Match: AT5G53420.3 (CCT motif family protein ) HSP 1 Score: 138.7 bits (348), Expect = 7.5e-33 Identity = 88/217 (40.55%), Postives = 128/217 (58.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|