Tan0017855 (gene) Snake gourd v1

Overview


Name	Tan0017855
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Protein of unknown function (DUF3511)
Location	LG04: 80635840 .. 80636304 (+)
RNA-Seq Expression	Tan0017855
Synteny	Tan0017855

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGTTCAGAGACCACCATTTGAATATTCCTTTTTCCCCTTTTCCAATTTTACCCCTCTCCGCTCCGCCATGTGCAAATAAAATCATCTCTTCGCTCTTCCTTTCGCCTCCCTCTCCCACTCTCCCATTTCAATGGCCGCTTTCGAATCGGCCCACGGCGGCGCCCGGAGGATCGAGATCGTCAGCGGCAAACGCTACAGTGGAGGCGGCGGCCAGATCTACGGGTCGCCGAATTTTGCTACGAGTGCTAACCGGGTCGGGTCGGCAACGGCGGCGGCGAAGCCCTGGGGGTTCGGCGACCCGGAGGCGAAGCGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTTGAAGGGAAGGTGAAGGATTCGCTGCGGAAGGGACTACGGTGGATTAAGAATAAGTGCTCTCGGATTGTCCATGGTTATTGATCACAAATAATCAACGGTTCTGATTTTCTCCCT

mRNA sequence

CGAGTTCAGAGACCACCATTTGAATATTCCTTTTTCCCCTTTTCCAATTTTACCCCTCTCCGCTCCGCCATGTGCAAATAAAATCATCTCTTCGCTCTTCCTTTCGCCTCCCTCTCCCACTCTCCCATTTCAATGGCCGCTTTCGAATCGGCCCACGGCGGCGCCCGGAGGATCGAGATCGTCAGCGGCAAACGCTACAGTGGAGGCGGCGGCCAGATCTACGGGTCGCCGAATTTTGCTACGAGTGCTAACCGGGTCGGGTCGGCAACGGCGGCGGCGAAGCCCTGGGGGTTCGGCGACCCGGAGGCGAAGCGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTTGAAGGGAAGGTGAAGGATTCGCTGCGGAAGGGACTACGGTGGATTAAGAATAAGTGCTCTCGGATTGTCCATGGTTATTGATCACAAATAATCAACGGTTCTGATTTTCTCCCT

Coding sequence (CDS)

ATGGCCGCTTTCGAATCGGCCCACGGCGGCGCCCGGAGGATCGAGATCGTCAGCGGCAAACGCTACAGTGGAGGCGGCGGCCAGATCTACGGGTCGCCGAATTTTGCTACGAGTGCTAACCGGGTCGGGTCGGCAACGGCGGCGGCGAAGCCCTGGGGGTTCGGCGACCCGGAGGCGAAGCGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTTGAAGGGAAGGTGAAGGATTCGCTGCGGAAGGGACTACGGTGGATTAAGAATAAGTGCTCTCGGATTGTCCATGGTTATTGA

Protein sequence

MAAFESAHGGARRIEIVSGKRYSGGGGQIYGSPNFATSANRVGSATAAAKPWGFGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVHGY

Homology

[Close]

BLAST of Tan0017855 vs. NCBI nr
Match: XP_022998630.1 (uncharacterized protein LOC111493216 [Cucurbita maxima])

HSP 1 Score: 170.6 bits (431), Expect = 6.6e-39
Identity = 85/100 (85.00%), Postives = 90/100 (90.00%), Query Frame = 0


Query: 1   MAAFESAHGGARRIEIVSGKRYSGGGG-QIYGSPNFATSANRVGSATAAAKPWGFGDPEA 60
           MA F+SAHGG RR+EIVSGKRY G G  QIYGSPN AT+ANRVGSA+AAAKPW FGDPE 
Sbjct: 1   MAHFQSAHGGGRRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEG 60

Query: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVHGY 100
           KRRKRIAKYKVYTVEGKVKDSLRKGL+WIK KCSRIVHGY
Sbjct: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100

[Close]

BLAST of Tan0017855 vs. NCBI nr
Match: XP_023524599.1 (uncharacterized protein LOC111788494 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.8 bits (421), Expect = 9.6e-38
Identity = 84/100 (84.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 1   MAAFESAHGGARRIEIVSGKRYSGGGG-QIYGSPNFATSANRVGSATAAAKPWGFGDPEA 60
           MA F+SAHGG R +EIVSGKRY G G  QIYGSPN ATS NRVGSA AAAKPW FGDPE 
Sbjct: 1   MAHFQSAHGGGRCVEIVSGKRYGGDGSCQIYGSPNLATSTNRVGSAAAAAKPWRFGDPEG 60

Query: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVHGY 100
           KRRKRIAKYKVYTVEGKVKDSLRKGL+WIK KCSRIVHGY
Sbjct: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100

[Close]

BLAST of Tan0017855 vs. NCBI nr
Match: XP_022949041.1 (uncharacterized protein LOC111452504 [Cucurbita moschata] >KAG6606946.1 hypothetical protein SDJN03_00288, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164.5 bits (415), Expect = 4.8e-37
Identity = 82/100 (82.00%), Postives = 86/100 (86.00%), Query Frame = 0


Query: 1   MAAFESAHGGARRIEIVSGKRYSGGGG-QIYGSPNFATSANRVGSATAAAKPWGFGDPEA 60
           MA F+SAHGG R +EIVSGKRY G G  QIYGSPN AT+ NRVG A AAAKPW FGDPE 
Sbjct: 1   MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEG 60

Query: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVHGY 100
           KRRKRIAKYKVYTVEGKVKDSLRKGL+WIK KCSRIVHGY
Sbjct: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100

[Close]

BLAST of Tan0017855 vs. NCBI nr
Match: KAA0044404.1 (hypothetical protein E6C27_scaffold46G001330 [Cucumis melo var. makuwa] >TYK29531.1 hypothetical protein E5676_scaffold655G001340 [Cucumis melo var. makuwa])

HSP 1 Score: 137.1 bits (344), Expect = 8.1e-29
Identity = 75/100 (75.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 1   MAAFESAHGGARRIEIVSGKRYSG-GGGQIYGSPNFATSANRVGSATAAAKPWGFGDPEA 60
           M+AF+S    ARRIEIVSGK        QIY SPN  T+ NRVGSA AA KPWGF DPEA
Sbjct: 1   MSAFDS----ARRIEIVSGKHNGARPAPQIYRSPNLDTNGNRVGSA-AAGKPWGFADPEA 60

Query: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVHGY 100
           KRRKRIAKYKVYTVEG+VKDSLRKGLRWIKN+CSRIVHG+
Sbjct: 61  KRRKRIAKYKVYTVEGRVKDSLRKGLRWIKNRCSRIVHGF 95

[Close]

BLAST of Tan0017855 vs. NCBI nr
Match: KGN52839.1 (hypothetical protein Csa_014389 [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 4.0e-28
Identity = 71/90 (78.89%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 11  ARRIEIVSGKRYSG-GGGQIYGSPNFATSANRVGSATAAAKPWGFGDPEAKRRKRIAKYK 70
           ARRIEIVSGK        QIY SPN  T+ NRVGSA A  KPWGF DPEAKRRKRIAKYK
Sbjct: 3   ARRIEIVSGKHNGARAAPQIYRSPNLDTNGNRVGSA-ATGKPWGFADPEAKRRKRIAKYK 62

Query: 71  VYTVEGKVKDSLRKGLRWIKNKCSRIVHGY 100
           VYTVEG+VKDSLRKGLRWIKNKCSRIVHG+
Sbjct: 63  VYTVEGRVKDSLRKGLRWIKNKCSRIVHGF 91

[Close]

BLAST of Tan0017855 vs. ExPASy TrEMBL
Match: A0A6J1KD11 (uncharacterized protein LOC111493216 OS=Cucurbita maxima OX=3661 GN=LOC111493216 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.2e-39
Identity = 85/100 (85.00%), Postives = 90/100 (90.00%), Query Frame = 0


Query: 1   MAAFESAHGGARRIEIVSGKRYSGGGG-QIYGSPNFATSANRVGSATAAAKPWGFGDPEA 60
           MA F+SAHGG RR+EIVSGKRY G G  QIYGSPN AT+ANRVGSA+AAAKPW FGDPE 
Sbjct: 1   MAHFQSAHGGGRRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEG 60

Query: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVHGY 100
           KRRKRIAKYKVYTVEGKVKDSLRKGL+WIK KCSRIVHGY
Sbjct: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100

[Close]

BLAST of Tan0017855 vs. ExPASy TrEMBL
Match: A0A6J1GAV9 (uncharacterized protein LOC111452504 OS=Cucurbita moschata OX=3662 GN=LOC111452504 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.3e-37
Identity = 82/100 (82.00%), Postives = 86/100 (86.00%), Query Frame = 0


Query: 1   MAAFESAHGGARRIEIVSGKRYSGGGG-QIYGSPNFATSANRVGSATAAAKPWGFGDPEA 60
           MA F+SAHGG R +EIVSGKRY G G  QIYGSPN AT+ NRVG A AAAKPW FGDPE 
Sbjct: 1   MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEG 60

Query: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVHGY 100
           KRRKRIAKYKVYTVEGKVKDSLRKGL+WIK KCSRIVHGY
Sbjct: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100

[Close]

BLAST of Tan0017855 vs. ExPASy TrEMBL
Match: A0A5A7TMP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001340 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.9e-29
Identity = 75/100 (75.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 1   MAAFESAHGGARRIEIVSGKRYSG-GGGQIYGSPNFATSANRVGSATAAAKPWGFGDPEA 60
           M+AF+S    ARRIEIVSGK        QIY SPN  T+ NRVGSA AA KPWGF DPEA
Sbjct: 1   MSAFDS----ARRIEIVSGKHNGARPAPQIYRSPNLDTNGNRVGSA-AAGKPWGFADPEA 60

Query: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVHGY 100
           KRRKRIAKYKVYTVEG+VKDSLRKGLRWIKN+CSRIVHG+
Sbjct: 61  KRRKRIAKYKVYTVEGRVKDSLRKGLRWIKNRCSRIVHGF 95

[Close]

BLAST of Tan0017855 vs. ExPASy TrEMBL
Match: A0A0A0KV97 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002560 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.0e-28
Identity = 71/90 (78.89%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 11  ARRIEIVSGKRYSG-GGGQIYGSPNFATSANRVGSATAAAKPWGFGDPEAKRRKRIAKYK 70
           ARRIEIVSGK        QIY SPN  T+ NRVGSA A  KPWGF DPEAKRRKRIAKYK
Sbjct: 3   ARRIEIVSGKHNGARAAPQIYRSPNLDTNGNRVGSA-ATGKPWGFADPEAKRRKRIAKYK 62

Query: 71  VYTVEGKVKDSLRKGLRWIKNKCSRIVHGY 100
           VYTVEG+VKDSLRKGLRWIKNKCSRIVHG+
Sbjct: 63  VYTVEGRVKDSLRKGLRWIKNKCSRIVHGF 91

[Close]

BLAST of Tan0017855 vs. ExPASy TrEMBL
Match: A0A1R3H0Q6 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_22163 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.1e-23
Identity = 63/93 (67.74%), Postives = 71/93 (76.34%), Query Frame = 0


Query: 12  RRIEIVSGKRYSGGGGQIYG----SPNFATSANRVGSAT-AAAKPWGFGDPEAKRRKRIA 71
           RR+EIVSGK  S GG QI+     SP+   + NR   A+   +KPWGF DPE KR+KRIA
Sbjct: 15  RRMEIVSGKSSSIGGNQIFSGRSRSPDLQQAQNRTTRASQGTSKPWGFTDPEMKRKKRIA 74

Query: 72  KYKVYTVEGKVKDSLRKGLRWIKNKCSRIVHGY 100
           KYKVYTVEGKVK SLRKGLRWIKNKCS+IVHGY
Sbjct: 75  KYKVYTVEGKVKSSLRKGLRWIKNKCSQIVHGY 107

[Close]

BLAST of Tan0017855 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 83.2 bits (204), Expect = 1.3e-16
Identity = 48/103 (46.60%), Postives = 64/103 (62.14%), Query Frame = 0


Query: 5   ESAHGGARRIEIVSGKRYSGGGGQIYGSPNFATS--------ANRVGSATAAAKPWGFGD 64
           +  +G  RR EIVSGKR      QIYG+ ++  S        A    +A+++ +  G  D
Sbjct: 13  QRTYGVDRRKEIVSGKR-----NQIYGTRDYPPSLPPPPGKVAAGRSNASSSLRIGGLSD 72

Query: 65  PEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVHGY 100
            E KR+KRIA+YK YTVEGKVK +L+ G RWIKNKC +IVH +
Sbjct: 73  AEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

[Close]

BLAST of Tan0017855 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 72.8 bits (177), Expect = 1.8e-13
Identity = 42/94 (44.68%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 14  IEIVSGKRYS-GGGGQIYG----SPNFATSANRVGSATA----AAKPWGFGDPEAKRRKR 73
           ++IV+GK Y  GG  Q+Y     SP F  S      +T+     A PW   D E KR+KR
Sbjct: 17  MDIVNGKGYGVGGTTQVYSTRPDSPKFQPSIPPPPGSTSKTRTTATPWRLIDAETKRKKR 76

Query: 74  IAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVHG 99
           IA YK Y +EGKVK +++KG  WIK++ S I+HG
Sbjct: 77  IATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

[Close]

BLAST of Tan0017855 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 66.2 bits (160), Expect = 1.6e-11
Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 41  RVGSATAAAKPWGFGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVHG 99
           R  S +   K W + DPE KR++R+AKYK+Y+ EGK+K +LRK  +WIK +CS+I+HG
Sbjct: 67  RSSSHSTLFKGW-WNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

[Close]

BLAST of Tan0017855 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 65.9 bits (159), Expect = 2.1e-11
Identity = 24/52 (46.15%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 46  TAAAKPWGFGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVH 98
           ++++  WGF DP+ +R+KR+  Y+ YTVEGK+K S RK  +WIK+KC+++++
Sbjct: 65  SSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLLN 116

[Close]

BLAST of Tan0017855 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 65.1 bits (157), Expect = 3.7e-11
Identity = 36/95 (37.89%), Postives = 56/95 (58.95%), Query Frame = 0


Query: 10  GARRIEIVSGKRYSGGGGQIYGSPNFATSANRV-----GSATAAAKPWGFGDPEAKRRKR 69
           G  +I+   G +  GG  + Y S ++ T  N +       + A +K WG  DPE +R+KR
Sbjct: 13  GGMQIQPYHGNQ--GGDFRSY-SASYGTRENNIYDVKKEKSIARSKSWGITDPELQRKKR 72

Query: 70  IAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVHGY 100
           +A YK+Y VEGKVK S R   RW+K + +++V+G+
Sbjct: 73  VASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGW 104

The following BLAST results are available for this feature:

BLAST of Tan0017855 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0017855 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998630.1	6.6e-39	85.00	uncharacterized protein LOC111493216 [Cucurbita maxima]	[more]
XP_023524599.1	9.6e-38	84.00	uncharacterized protein LOC111788494 [Cucurbita pepo subsp. pepo]	[more]
XP_022949041.1	4.8e-37	82.00	uncharacterized protein LOC111452504 [Cucurbita moschata] >KAG6606946.1 hypothet...	[more]
KAA0044404.1	8.1e-29	75.00	hypothetical protein E6C27_scaffold46G001330 [Cucumis melo var. makuwa] >TYK2953...	[more]
KGN52839.1	4.0e-28	78.89	hypothetical protein Csa_014389 [Cucumis sativus]	[more]

BLAST of Tan0017855 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KD11	3.2e-39	85.00	uncharacterized protein LOC111493216 OS=Cucurbita maxima OX=3661 GN=LOC111493216...	[more]
A0A6J1GAV9	2.3e-37	82.00	uncharacterized protein LOC111452504 OS=Cucurbita moschata OX=3662 GN=LOC1114525...	[more]
A0A5A7TMP6	3.9e-29	75.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KV97	2.0e-28	78.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002560 PE=4 SV=1	[more]
A0A1R3H0Q6	1.1e-23	67.74	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_22163 PE=4 ...	[more]

BLAST of Tan0017855 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47480.1	1.3e-16	46.60	Protein of unknown function (DUF3511)	[more]
AT3G62640.1	1.8e-13	44.68	Protein of unknown function (DUF3511)	[more]
AT3G05725.1	1.6e-11	51.72	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	2.1e-11	46.15	Protein of unknown function (DUF3511)	[more]
AT5G11970.1	3.7e-11	37.89	Protein of unknown function (DUF3511)	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 54..98 e-value: 4.7E-27 score: 93.6
None	No IPR available	PANTHER	PTHR33193	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 6..99
None	No IPR available	PANTHER	PTHR33193:SF13	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 6..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0017855.1	Tan0017855.1	mRNA