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Tan0017854 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGGGATTTGTTTATCTTTTTGCATTGCAGCATGCACTTTAAATGTGAGGGATGGGAAGTACATTTCACCCATAATTTTATCATGTTTCGAGTTAACTCAGTAATTTTATCATGTTTCCAGTAAAATTATTCACTTGGTATTTGAGAGACTCCAATTACAGTGTGTGAATGCATACCATATTTAGGATGCAAATTTGTTGGTTTTTTTAAACAGTAGCTTTAAGCTTTATATGAAGAGTGAAATTTGAAGTTCGATTCTAGTCTGCAGTTGTGCAGATAATTCATTATATTTAGCCTGTGCTTCAACTTCAATGACCAAATATCAAGAAACGATCTGCATCGGTCATTTGGATCTGTTCTTATTTGCTTTAGTTAGATAAAGTGCGACCAGAATGATTTCTTACTCATTGTGAATTGATAGAGAAATGGTCTTATTGCCCATTTCAAGAGGCTCGATGTGATTCTTCGCCATTATGAACTAGAAAGATATAAACATATTTACTACCATTCTCTAATTAGCCTCTTCCATCCATTTTGTGTGGCTTATTTTGCTTGGCTAACTATTTATTTTATTATAAGATTTCCCTTTGGTGTGGTGCATGAAGTTTATTAAAAAATTTCTAGTTTGAAAATACATCTGCAGGTTACAAATTATACTGGAACTTGAGAGCTTGTTGAAGTTGCAGAAAGCATGGCCAAGCATCATCCCGATTTGATTATGTGCAGAAAGCAGCCAGGAATTGCAATTGGCCGACTGTGTGAAAAGTGTGACGGGAAGTGTGTAATCTGCGATTCTTATGTCCGTCCGTGTACGCTTGTTCGAGTTTGTGATGAATGCAATTACGGGTCTTTCCAAGGTCGATGTGTGATCTGTGGAGGAGTGGAATTTCAGATGCCTACTACTGCAAAGAGTGCACACAGCAGGAGAAAGATAGAGATGGATGTCCAAAGATTGTTAACTTAG ATGGGTGGGATTTGTTTATCTTTTTGCATTGCAGCATGCACTTTAAATCCAGGAATTGCAATTGGCCGACTGTGTGAAAAGTGTGACGGGAAGTGTGTAATCTGCGATTCTTATGTCCGTCCGTGTACGCTTGTTCGAGTTTGTGATGAATGCAATTACGGGTCTTTCCAAGGTCGATGTGTGATCTGTGGAGGAGTGGAATTTCAGATGCCTACTACTGCAAAGAGTGCACACAGCAGGAGAAAGATAGAGATGGATGTCCAAAGATTGTTAACTTAG ATGGGTGGGATTTGTTTATCTTTTTGCATTGCAGCATGCACTTTAAATCCAGGAATTGCAATTGGCCGACTGTGTGAAAAGTGTGACGGGAAGTGTGTAATCTGCGATTCTTATGTCCGTCCGTGTACGCTTGTTCGAGTTTGTGATGAATGCAATTACGGGTCTTTCCAAGGTCGATGTGTGATCTGTGGAGGAGTGGAATTTCAGATGCCTACTACTGCAAAGAGTGCACACAGCAGGAGAAAGATAGAGATGGATGTCCAAAGATTGTTAACTTAG MGGICLSFCIAACTLNPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVEFQMPTTAKSAHSRRKIEMDVQRLLT Homology
BLAST of Tan0017854 vs. ExPASy Swiss-Prot
Match: P0DI19 (PHD finger-like domain-containing protein 5A OS=Arabidopsis thaliana OX=3702 GN=At2g30000 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 3.7e-26 Identity = 50/54 (92.59%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of Tan0017854 vs. ExPASy Swiss-Prot
Match: Q0WMV8 (PHD finger-like domain-containing protein 5B OS=Arabidopsis thaliana OX=3702 GN=At1g07170 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 3.7e-26 Identity = 50/54 (92.59%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of Tan0017854 vs. ExPASy Swiss-Prot
Match: Q7RTV0 (PHD finger-like domain-containing protein 5A OS=Homo sapiens OX=9606 GN=PHF5A PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 3.4e-24 Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0
BLAST of Tan0017854 vs. ExPASy Swiss-Prot
Match: P83870 (PHD finger-like domain-containing protein 5A OS=Mus musculus OX=10090 GN=Phf5a PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 3.4e-24 Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0
BLAST of Tan0017854 vs. ExPASy Swiss-Prot
Match: P83871 (PHD finger-like domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Phf5a PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 3.4e-24 Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0
BLAST of Tan0017854 vs. NCBI nr
Match: RXH81854.1 (hypothetical protein DVH24_036195 [Malus domestica]) HSP 1 Score: 119.8 bits (299), Expect = 1.3e-23 Identity = 53/70 (75.71%), Postives = 54/70 (77.14%), Query Frame = 0
BLAST of Tan0017854 vs. NCBI nr
Match: KAF4106639.1 (hypothetical protein G5714_012629 [Onychostoma macrolepis]) HSP 1 Score: 119.4 bits (298), Expect = 1.6e-23 Identity = 55/78 (70.51%), Postives = 60/78 (76.92%), Query Frame = 0
BLAST of Tan0017854 vs. NCBI nr
Match: PPD86829.1 (hypothetical protein GOBAR_DD16226 [Gossypium barbadense]) HSP 1 Score: 119.0 bits (297), Expect = 2.1e-23 Identity = 51/54 (94.44%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of Tan0017854 vs. NCBI nr
Match: MBA0658370.1 (hypothetical protein [Gossypium klotzschianum]) HSP 1 Score: 119.0 bits (297), Expect = 2.1e-23 Identity = 51/54 (94.44%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of Tan0017854 vs. NCBI nr
Match: THU49754.1 (hypothetical protein C4D60_Mb06t12860 [Musa balbisiana]) HSP 1 Score: 119.0 bits (297), Expect = 2.1e-23 Identity = 51/54 (94.44%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of Tan0017854 vs. ExPASy TrEMBL
Match: A0A498II63 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_036195 PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 6.1e-24 Identity = 53/70 (75.71%), Postives = 54/70 (77.14%), Query Frame = 0
BLAST of Tan0017854 vs. ExPASy TrEMBL
Match: A0A7J6CH43 (Uncharacterized protein OS=Onychostoma macrolepis OX=369639 GN=G5714_012629 PE=3 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 7.9e-24 Identity = 55/78 (70.51%), Postives = 60/78 (76.92%), Query Frame = 0
BLAST of Tan0017854 vs. ExPASy TrEMBL
Match: A0A6J1I5N2 (PHD finger-like domain-containing protein 5B OS=Cucurbita maxima OX=3661 GN=LOC111469455 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.0e-23 Identity = 51/54 (94.44%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of Tan0017854 vs. ExPASy TrEMBL
Match: A0A1U8I119 (PHD finger-like domain-containing protein 5B OS=Gossypium hirsutum OX=3635 GN=LOC107891610 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.0e-23 Identity = 51/54 (94.44%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of Tan0017854 vs. ExPASy TrEMBL
Match: A0A1S3VFD8 (PHD finger-like domain-containing protein 5B OS=Vigna radiata var. radiata OX=3916 GN=LOC106774489 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.0e-23 Identity = 51/54 (94.44%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of Tan0017854 vs. TAIR 10
Match: AT1G07170.1 (PHF5-like protein ) HSP 1 Score: 118.6 bits (296), Expect = 2.6e-27 Identity = 50/54 (92.59%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of Tan0017854 vs. TAIR 10
Match: AT1G07170.2 (PHF5-like protein ) HSP 1 Score: 118.6 bits (296), Expect = 2.6e-27 Identity = 50/54 (92.59%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of Tan0017854 vs. TAIR 10
Match: AT1G07170.3 (PHF5-like protein ) HSP 1 Score: 118.6 bits (296), Expect = 2.6e-27 Identity = 50/54 (92.59%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of Tan0017854 vs. TAIR 10
Match: AT2G30000.1 (PHF5-like protein ) HSP 1 Score: 118.6 bits (296), Expect = 2.6e-27 Identity = 50/54 (92.59%), Postives = 51/54 (94.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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