Tan0017848 (gene) Snake gourd v1

Overview


Name	Tan0017848
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein RETICULATA-RELATED 3, chloroplastic
Location	LG03: 62354365 .. 62356278 (+)
RNA-Seq Expression	Tan0017848
Synteny	Tan0017848

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAAAGCGAAACAGAGATTTAAGTTTTTAACAACTGACGATTAACACCTCTTCTATATATATATAAAATATATATATATTGATTCCTCTGTTAAACAGTGCCGTTTTTGACCCGTTTTGGCCACCTACGCCACCCTCGATGCGCTCTCCATTTTCGGCTGCGCCAATTCACAATCTCTCTGTTTGTTCCTTTTAGTTCCTGTTTCTTTTCTCTCTCAAGGTGGTTCCCATTTCCCATCATTTGTTTTCGTGTATTTTATGTTGATCATGTGATCTCTGTTCTGTTTTGCCACTTTCTCCCCCGTTTTTGATCCATTTTTTCGCTTCAGATCTGGTGGATACTTGTTGAATTGGGTTGTTTTTGTTTTTCTCCATGGTGGGTTTGTGATATTTATCTGAATCTGTGTTTGTTGCTTGTTTTTTCAGATTTGAGGATTTGGGTAGGTTTGTTTTTTAAGGGATTTCTTTTTGTTGAATTATGGCGGCCATGGCTCAGCTGCATTGCTCCATTCGTCCTAGGCAGTACTATAATGTTCCCAATAACCATGCTTATAACAACACTCCGGCTTTCTCTTTTCTATCTAATTCGTCGGCGGTTGATTCGAGGAGTCGATCTCTTTCTCTTTTTAATGCGGATTTAACGAGGCCTAGTTTTTTGGCCAAATCTGAACTTTCTGTTGCTGGTGGCGACGGTGGAAATGGCGTTGGCCATGGCGGAGGCGGCGGCGGCGGCGGTGGTGATAGTGGTGGTTGGAGCGATGATCGGCCTCATGGGGATGATGATTCGTCGAGATTTGGAGTGTTGGGATTGTTTCTTAATGGGTGGAGATCTAGAGTTGCTGCGGATCCACAGTTTCCTTTTAAGGTACTGATGGAAGAGCTGGTTGGTGTGAGTGCTTGTGTTCTTGGAGACATGGCGTCCCGCCCGAATTTCGGCCTCAACGAGCTCGACTTTGTCTTCTCCACCCTTGTCGTTGGATCTATACTGAATTTTACTCTCATGTATCTGTTGGCTCCCACTGCATCAGCTGGTGCAGCAGCCAAGCAGCTTCCTGCAATCTTTGCTAGTTGCCCCACGAGTCACATGTTCGAACCGGGCGCTTTCACGGTCTTGGATCGATTAGGAACCTTTATTTACAAAGGGACCGTCTTCGCCACGGTTGGACTAGCAGCTGGGCTCGCTGGTACCATGCTCTCAAATGGCTTGATCAAGCTGAGGAAGAAGATGGATCCCGAATTCGAGACGCCGAATAAGGCACCTCCCACATTGTTGAACGCCATGACTTGGGCAATTCACATGGGGGTCAGCAGTAACTTGAGATACCAAACTTTGAATGGACTTGAATTTGTGTTGGCCAAGGGGCTTCCTCCTCTGGCATTCAAGAGCTCTGTGGTGGTGTTGAGATGTTTGAACAACATTCTCGGGGGCATGTCGTTCGTCATCCTCGCAAGGATGACAGGATCACAGAGCATCGAGGAGCCGAAGCCAGCAGCAGCGGAGTTGGATTCTGCTGATGAGAAAGAGAAGCTGTTGGAAGGGGATAAAGATGAGGAGTTAAAGTAAGGACTTTCTGCAAGAACTTGGTTGGTATAACTATCATTTTGGCTTTGTCTCCATTGTTAATATATGTTCCATGCTCTGTAACAATAAGAAGCTCAAAAATGTTGTGAGGATTTTCTGAATTGTTAGGATTATTATGAGGCTTTGCTAATAGTTTTCATGGAAACTAAATGAGTTGCTTTATGGGCCACCAAATGTGTCTATTTTTTTTGCTTGAGCTTTCTCTGAGTTTAGAGTTGTTGATGCACATCACAATTCTTCTTCACTGATTTGTCAAAAAGTTTGTCTCTGGATGTGAGTTTTGAAAGCTTACTCTGAATTTTTGTTATAAAGTTTTAAAGCGGACTAAAAC

mRNA sequence

GAGAAAAGCGAAACAGAGATTTAAGTTTTTAACAACTGACGATTAACACCTCTTCTATATATATATAAAATATATATATATTGATTCCTCTGTTAAACAGTGCCGTTTTTGACCCGTTTTGGCCACCTACGCCACCCTCGATGCGCTCTCCATTTTCGGCTGCGCCAATTCACAATCTCTCTGTTTGTTCCTTTTAGTTCCTGTTTCTTTTCTCTCTCAAGATTTGAGGATTTGGGTAGGTTTGTTTTTTAAGGGATTTCTTTTTGTTGAATTATGGCGGCCATGGCTCAGCTGCATTGCTCCATTCGTCCTAGGCAGTACTATAATGTTCCCAATAACCATGCTTATAACAACACTCCGGCTTTCTCTTTTCTATCTAATTCGTCGGCGGTTGATTCGAGGAGTCGATCTCTTTCTCTTTTTAATGCGGATTTAACGAGGCCTAGTTTTTTGGCCAAATCTGAACTTTCTGTTGCTGGTGGCGACGGTGGAAATGGCGTTGGCCATGGCGGAGGCGGCGGCGGCGGCGGTGGTGATAGTGGTGGTTGGAGCGATGATCGGCCTCATGGGGATGATGATTCGTCGAGATTTGGAGTGTTGGGATTGTTTCTTAATGGGTGGAGATCTAGAGTTGCTGCGGATCCACAGTTTCCTTTTAAGGTACTGATGGAAGAGCTGGTTGGTGTGAGTGCTTGTGTTCTTGGAGACATGGCGTCCCGCCCGAATTTCGGCCTCAACGAGCTCGACTTTGTCTTCTCCACCCTTGTCGTTGGATCTATACTGAATTTTACTCTCATGTATCTGTTGGCTCCCACTGCATCAGCTGGTGCAGCAGCCAAGCAGCTTCCTGCAATCTTTGCTAGTTGCCCCACGAGTCACATGTTCGAACCGGGCGCTTTCACGGTCTTGGATCGATTAGGAACCTTTATTTACAAAGGGACCGTCTTCGCCACGGTTGGACTAGCAGCTGGGCTCGCTGGTACCATGCTCTCAAATGGCTTGATCAAGCTGAGGAAGAAGATGGATCCCGAATTCGAGACGCCGAATAAGGCACCTCCCACATTGTTGAACGCCATGACTTGGGCAATTCACATGGGGGTCAGCAGTAACTTGAGATACCAAACTTTGAATGGACTTGAATTTGTGTTGGCCAAGGGGCTTCCTCCTCTGGCATTCAAGAGCTCTGTGGTGGTGTTGAGATGTTTGAACAACATTCTCGGGGGCATGTCGTTCGTCATCCTCGCAAGGATGACAGGATCACAGAGCATCGAGGAGCCGAAGCCAGCAGCAGCGGAGTTGGATTCTGCTGATGAGAAAGAGAAGCTGTTGGAAGGGGATAAAGATGAGGAGTTAAAGTAAGGACTTTCTGCAAGAACTTGGTTGGTATAACTATCATTTTGGCTTTGTCTCCATTGTTAATATATGTTCCATGCTCTGTAACAATAAGAAGCTCAAAAATGTTGTGAGGATTTTCTGAATTGTTAGGATTATTATGAGGCTTTGCTAATAGTTTTCATGGAAACTAAATGAGTTGCTTTATGGGCCACCAAATGTGTCTATTTTTTTTGCTTGAGCTTTCTCTGAGTTTAGAGTTGTTGATGCACATCACAATTCTTCTTCACTGATTTGTCAAAAAGTTTGTCTCTGGATGTGAGTTTTGAAAGCTTACTCTGAATTTTTGTTATAAAGTTTTAAAGCGGACTAAAAC

Coding sequence (CDS)

ATGGCGGCCATGGCTCAGCTGCATTGCTCCATTCGTCCTAGGCAGTACTATAATGTTCCCAATAACCATGCTTATAACAACACTCCGGCTTTCTCTTTTCTATCTAATTCGTCGGCGGTTGATTCGAGGAGTCGATCTCTTTCTCTTTTTAATGCGGATTTAACGAGGCCTAGTTTTTTGGCCAAATCTGAACTTTCTGTTGCTGGTGGCGACGGTGGAAATGGCGTTGGCCATGGCGGAGGCGGCGGCGGCGGCGGTGGTGATAGTGGTGGTTGGAGCGATGATCGGCCTCATGGGGATGATGATTCGTCGAGATTTGGAGTGTTGGGATTGTTTCTTAATGGGTGGAGATCTAGAGTTGCTGCGGATCCACAGTTTCCTTTTAAGGTACTGATGGAAGAGCTGGTTGGTGTGAGTGCTTGTGTTCTTGGAGACATGGCGTCCCGCCCGAATTTCGGCCTCAACGAGCTCGACTTTGTCTTCTCCACCCTTGTCGTTGGATCTATACTGAATTTTACTCTCATGTATCTGTTGGCTCCCACTGCATCAGCTGGTGCAGCAGCCAAGCAGCTTCCTGCAATCTTTGCTAGTTGCCCCACGAGTCACATGTTCGAACCGGGCGCTTTCACGGTCTTGGATCGATTAGGAACCTTTATTTACAAAGGGACCGTCTTCGCCACGGTTGGACTAGCAGCTGGGCTCGCTGGTACCATGCTCTCAAATGGCTTGATCAAGCTGAGGAAGAAGATGGATCCCGAATTCGAGACGCCGAATAAGGCACCTCCCACATTGTTGAACGCCATGACTTGGGCAATTCACATGGGGGTCAGCAGTAACTTGAGATACCAAACTTTGAATGGACTTGAATTTGTGTTGGCCAAGGGGCTTCCTCCTCTGGCATTCAAGAGCTCTGTGGTGGTGTTGAGATGTTTGAACAACATTCTCGGGGGCATGTCGTTCGTCATCCTCGCAAGGATGACAGGATCACAGAGCATCGAGGAGCCGAAGCCAGCAGCAGCGGAGTTGGATTCTGCTGATGAGAAAGAGAAGCTGTTGGAAGGGGATAAAGATGAGGAGTTAAAGTAA

Protein sequence

MAAMAQLHCSIRPRQYYNVPNNHAYNNTPAFSFLSNSSAVDSRSRSLSLFNADLTRPSFLAKSELSVAGGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGDDDSSRFGVLGLFLNGWRSRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFIYKGTVFATVGLAAGLAGTMLSNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILGGMSFVILARMTGSQSIEEPKPAAAELDSADEKEKLLEGDKDEELK

Homology

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BLAST of Tan0017848 vs. ExPASy Swiss-Prot
Match: Q9C9Z2 (Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER3 PE=1 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 7.0e-105
Identity = 192/267 (71.91%), Postives = 225/267 (84.27%), Query Frame = 0


Query: 68  AGGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGDDDSSRFGVLGLFLNGWRSRVAADPQFP 127
           AGG GG   G+ GGG G GG  GG+        ++SS +G +GLF+ GWRSRVAADPQFP
Sbjct: 60  AGGGGGGSTGNNGGGSGSGGGGGGFGGSGGEASEESSPWGPIGLFIQGWRSRVAADPQFP 119

Query: 128 FKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGAA 187
           FKVLMEE+VG+SACVLGDMASRPNFGLNELDFVFSTLVVGSILNF LMY+LAPTA+   +
Sbjct: 120 FKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAATLGS 179

Query: 188 AKQLPAIFASCPTSHMFEPGAFTVLDRLGTFIYKGTVFATVGLAAGLAGTMLSNGLIKLR 247
           ++ LP IF +CP+SHMFE G+FTV++R GT +YKG VFA+VGLAAGL GT +SNGLI LR
Sbjct: 180 SQTLPGIFRNCPSSHMFEQGSFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLR 239

Query: 248 KKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVLAKGLPPLAFKSSVVV 307
           KKMDP FETPNK PPT+LN++TWA HMGVS+N RYQTLNG+EF+LAK LPPL FK+SV+V
Sbjct: 240 KKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIEFLLAKVLPPLVFKTSVIV 299

Query: 308 LRCLNNILGGMSFVILARMTGSQSIEE 335
           LRC NN+ GGMSFV+LARMTGSQS+EE
Sbjct: 300 LRCANNVAGGMSFVLLARMTGSQSVEE 326

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BLAST of Tan0017848 vs. ExPASy Swiss-Prot
Match: Q9C9Z3 (Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER2 PE=2 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 2.5e-102
Identity = 202/308 (65.58%), Postives = 240/308 (77.92%), Query Frame = 0


Query: 43  RSRSLSLFNADLTRPSFLAKSELSVAGGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGDDD 102
           R+ S+S  + + + P+ +    +  AGG GG  +G+ GGG G GG  GG+       +++
Sbjct: 39  RNGSVSSLHTNFSSPNIM----VPCAGGGGGGSIGNHGGGSGSGGGGGGYGGSE---EEE 98

Query: 103 SSRFGVLGLFLNGWRSRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFS 162
           SS +G LGLF+ GWRSRVAAD QFPFKVLME LVGVSA VLGDMASRPNFGLNELDFVFS
Sbjct: 99  SSPWGPLGLFIQGWRSRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFS 158

Query: 163 TLVVGSILNFTLMYLLAPTASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFIYKG 222
           TLVVGSILNFTLMYLLAP+A +  ++  LP IF SCP+SHMFE G FT+++R GT +YKG
Sbjct: 159 TLVVGSILNFTLMYLLAPSAISHGSSNLLPGIFRSCPSSHMFEQGNFTLMNRFGTLVYKG 218

Query: 223 TVFATVGLAAGLAGTMLSNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRY 282
            VFATVGLAAGL GT +SNGLI LRKK+DP FETPNK PPTLLN++TWA HMGVS+N+RY
Sbjct: 219 MVFATVGLAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRY 278

Query: 283 QTLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILGGMSFVILARMTGSQSIEEPKPAAAEL 342
           QTLNG EF+L K LPPL FK+SV+ LR +NN+LGGMSFV LARMTGSQS+EE K    E+
Sbjct: 279 QTLNGAEFLLEKSLPPLVFKTSVIALRVVNNVLGGMSFVTLARMTGSQSVEEEK--KIEM 337

Query: 343 DSADEKEK 351
               EKEK
Sbjct: 339 SEISEKEK 337

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BLAST of Tan0017848 vs. ExPASy Swiss-Prot
Match: B9DFK5 (Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 9.6e-22
Identity = 104/325 (32.00%), Postives = 151/325 (46.46%), Query Frame = 0


Query: 70  GDGGNGV-GHGGGGGGG-GGDSGGWSDDRPHGD--------------------------- 129
           GDG NG  G+GGGGGGG GG+  G  +D    +                           
Sbjct: 112 GDGFNGSDGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLE 171

Query: 130 ----------------DDSSRFGVLGLFLNGW---RSRVAADPQFPFKVLMEELVGVSAC 189
                           D  S  G+LG  +  W   R+R+ ADP F FK+  E ++     
Sbjct: 172 AAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCA 231

Query: 190 VLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA-------PTASAGAAAKQLPAI 249
            + ++  R      E +   + L+VG+++N  L+ +LA       P+AS G   + + A 
Sbjct: 232 TVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFA- 291

Query: 250 FASCPTSHMFE---PGA-FTVLDRLGTFIYKGTVFATVGLAAGLAGTMLSNGLIKLRKKM 309
           + + P+S +FE   PG  F+   RL T+ YKG ++  VG   G+ G  ++N LI   K+ 
Sbjct: 292 YNALPSS-VFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIAN-LIMTAKRN 351

Query: 310 DPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVL-----AKGLPPLAFKSSV 331
             + E     PP + +A  W + + VSSN RYQ +NGLE V+     AK  PP A   +V
Sbjct: 352 INKSEENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLERVVEASPFAKKFPPAAMAFTV 411

[Close]

BLAST of Tan0017848 vs. ExPASy Swiss-Prot
Match: Q9FGP9 (Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER1 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.4e-20
Identity = 103/324 (31.79%), Postives = 148/324 (45.68%), Query Frame = 0


Query: 69  GGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGD--------------------------DD 128
           GG+GGNG G GGGG G G D    +D     +                          + 
Sbjct: 113 GGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPEDMLEA 172

Query: 129 SSRFGVLGLFL--------NGW------------RSRVAADPQFPFKVLMEELVGVSACV 188
           +   G+  LFL        + W            R+R+ ADP F FKV  E  +      
Sbjct: 173 AKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSFLFKVGTEVAIDSCCAT 232

Query: 189 LGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGAAA-------KQLPAIF 248
             ++  R     +E +   + L+VG +++  L+ LLAP A  G  +       K L    
Sbjct: 233 FAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLFKDLKRAC 292

Query: 249 ASCPTSHMFE---PGA-FTVLDRLGTFIYKGTVFATVGLAAGLAGTMLSNGLIKLRKKMD 308
           AS P+S +FE   PG  F+V  R+ TF YKG ++ +VG   GL G  ++N LI   K+  
Sbjct: 293 ASLPSS-VFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIAN-LIMTAKRSV 352

Query: 309 PEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVL-----AKGLPPLAFKSSVV 331
            + E     PP   +A  W + +G+SSN RYQ +NGLE V+     AK +P +A   +V 
Sbjct: 353 KKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLERVVEGSTAAKRIPVVAMAFTVG 412

[Close]

BLAST of Tan0017848 vs. ExPASy Swiss-Prot
Match: Q94CJ5 (Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER4 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.3e-18
Identity = 95/326 (29.14%), Postives = 138/326 (42.33%), Query Frame = 0


Query: 65  LSVAGGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGDDDSSR------------------- 124
           LS + G+GG+    GG  GGGGG  GG +D   HGD+D  R                   
Sbjct: 60  LSASSGNGGSDNNGGGLSGGGGGGDGGKNDGDGHGDEDRDRNRNEAMLLLKESGIELESL 119

Query: 125 --------------FGVLGLFL--------------NGWRSRVAADPQFPFKVLMEELVG 184
                           V+  FL               G+R R+ AD  F  K+ ME  VG
Sbjct: 120 PKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGFRERLLADDLFMAKLAMECGVG 179

Query: 185 VSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAS----AGAAAKQLPA 244
           +      +   R     NEL+ VF+ + +  I +F L+YL APT S        A  +  
Sbjct: 180 IFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGISK 239

Query: 245 IFASCPTSHM---FEPGAFTVLDRLGTFIYKGTVFATVGLAAGLAGTMLSNGLIKLRKKM 304
            F +CP +         ++T+L RLG     G     VG  + L GT ++N  IK RK +
Sbjct: 240 FFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIKARKAV 299

Query: 305 DPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVLAKGLPP------LAFKSS 331
           D   E   +  P +  ++ + ++M VSSNLRYQ + G+  +  + L P      LA  + 
Sbjct: 300 DQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGV--IEQRLLEPMLHQHKLALSAL 359

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BLAST of Tan0017848 vs. NCBI nr
Match: XP_022156248.1 (protein RETICULATA-RELATED 3, chloroplastic [Momordica charantia])

HSP 1 Score: 627.9 bits (1618), Expect = 5.5e-176
Identity = 329/362 (90.88%), Postives = 344/362 (95.03%), Query Frame = 0


Query: 1   MAAMAQLHCSIRPRQYYNVPNNHAYNNTPAFSFLSNSSAVDSRSRSLSLFNADLTRPSFL 60
           MAAMAQLHCS+RPR YYNVP NHAYNNTPAFSFLS+SS + SR+RSLSLF+ DLTRPSFL
Sbjct: 1   MAAMAQLHCSLRPRNYYNVPCNHAYNNTPAFSFLSDSSVIQSRTRSLSLFHTDLTRPSFL 60

Query: 61  AKSELSVA-GGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGDDDSSRFGVLGLFLNGWRSR 120
           AKSELS+A GGDGG+GVG  GGGGGGGGDSGGWSDDR HGDDDSS FGVLGLFL GWRSR
Sbjct: 61  AKSELSLAGGGDGGDGVGR-GGGGGGGGDSGGWSDDRAHGDDDSSSFGVLGLFLKGWRSR 120

Query: 121 VAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180
           VAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA
Sbjct: 121 VAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180

Query: 181 PTASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFIYKGTVFATVGLAAGLAGTML 240
           PTA+AG AAKQLPAIF+SCPTSHMFEPGAFTVLDRLGTF+YKGTVFA VGLAAGL GT L
Sbjct: 181 PTAAAGVAAKQLPAIFSSCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTAL 240

Query: 241 SNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVLAKGLPPL 300
           SNGLIKLRKKMDPEFETPNKAPPTLLNA+TWAIHMGVSSNLRYQTLNG+EFVLAKGLPPL
Sbjct: 241 SNGLIKLRKKMDPEFETPNKAPPTLLNALTWAIHMGVSSNLRYQTLNGVEFVLAKGLPPL 300

Query: 301 AFKSSVVVLRCLNNILGGMSFVILARMTGSQSIEEPKPAAAELDSADEKEKLLEGDKDEE 360
           AFKSSVVVLRCLNN+LGG+SFVILAR TGSQSIE+PK AA ELDSADEKEKLLEGDKDEE
Sbjct: 301 AFKSSVVVLRCLNNVLGGVSFVILARATGSQSIEQPKAAAVELDSADEKEKLLEGDKDEE 360

Query: 361 LK 362
           LK
Sbjct: 361 LK 361

[Close]

BLAST of Tan0017848 vs. NCBI nr
Match: XP_038883563.1 (protein RETICULATA-RELATED 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 626.7 bits (1615), Expect = 1.2e-175
Identity = 327/362 (90.33%), Postives = 344/362 (95.03%), Query Frame = 0


Query: 1   MAAMAQLHCSIRPRQYYNVPNNHAYNNTPAFSFLSNSSAVDSRSRSLSLFNADLTRPSFL 60
           MAAMAQLHCS+RPR +YNVPNN AYN+TPAFSFLSNSS V+SRSRSLS FNADLTRPSFL
Sbjct: 1   MAAMAQLHCSVRPRHHYNVPNNPAYNSTPAFSFLSNSSVVESRSRSLSFFNADLTRPSFL 60

Query: 61  AKSELSVAGGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGDD-DSSRFGVLGLFLNGWRSR 120
           AKSELS+AGGDGGNGVGHGG GGGGGGD GGWSDDR HGDD DSS FGVLGLFL GWRSR
Sbjct: 61  AKSELSLAGGDGGNGVGHGGRGGGGGGD-GGWSDDRTHGDDNDSSSFGVLGLFLKGWRSR 120

Query: 121 VAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180
           VAADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA
Sbjct: 121 VAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180

Query: 181 PTASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFIYKGTVFATVGLAAGLAGTML 240
           PTA+AGAAAKQLPAIFASCPTSHMFEPGAFT+LDRLGTF+YKGTVFA VGLAAGL GT L
Sbjct: 181 PTAAAGAAAKQLPAIFASCPTSHMFEPGAFTLLDRLGTFVYKGTVFAAVGLAAGLVGTAL 240

Query: 241 SNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVLAKGLPPL 300
           SNGLIKLRKKMDP FETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNG+EF+LAKGLPPL
Sbjct: 241 SNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEFLLAKGLPPL 300

Query: 301 AFKSSVVVLRCLNNILGGMSFVILARMTGSQSIEEPKPAAAELDSADEKEKLLEGDKDEE 360
           AFKSSVVVLRCLNN+LGGMSFV+LAR+TGSQS+E PKPA  ELDS DEKEKLLEGDK+EE
Sbjct: 301 AFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAVMELDSGDEKEKLLEGDKEEE 360

Query: 361 LK 362
           L+
Sbjct: 361 LR 361

[Close]

BLAST of Tan0017848 vs. NCBI nr
Match: XP_023517477.1 (protein RETICULATA-RELATED 3, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023517478.1 protein RETICULATA-RELATED 3, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 624.0 bits (1608), Expect = 8.0e-175
Identity = 327/361 (90.58%), Postives = 340/361 (94.18%), Query Frame = 0


Query: 1   MAAMAQLHCSIRPRQYYNVPNNHAYNNTPAFSFLSNSSAVDSRSRSLSLFNADLTRPSFL 60
           MA+MAQLHCS+RPR YYNVP +HAYN+ PAFSFLSNSSAV+SRSRSLSLFNADLTR  FL
Sbjct: 1   MASMAQLHCSVRPRDYYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFL 60

Query: 61  AKSELSVAGGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGDDDSSRFGVLGLFLNGWRSRV 120
            KSELS+AGGDGGNGVG GGGGGGGGGDSGGWSDDR  GDD SS FGV GLFL GWR+RV
Sbjct: 61  VKSELSLAGGDGGNGVGRGGGGGGGGGDSGGWSDDRADGDDSSS-FGVFGLFLQGWRTRV 120

Query: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180
           AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP
Sbjct: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180

Query: 181 TASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFIYKGTVFATVGLAAGLAGTMLS 240
           TASAG AAKQLPAIF SCPTSHMFEPGAFTVL+RLGT +YKGTVFATVGLAAGL GT LS
Sbjct: 181 TASAGVAAKQLPAIFGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALS 240

Query: 241 NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVLAKGLPPLA 300
           NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQ+LNGLEFVLAKGLPPLA
Sbjct: 241 NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLA 300

Query: 301 FKSSVVVLRCLNNILGGMSFVILARMTGSQSIEEPKPAAAELDSADEKEKLLEGDKDEEL 360
           FKSSVVVLRCLNNILGGMSFVILARMTGSQS+EE KPAA +LD+AD KEKLLEGDKDEEL
Sbjct: 301 FKSSVVVLRCLNNILGGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEEL 360

Query: 361 K 362
           K
Sbjct: 361 K 360

[Close]

BLAST of Tan0017848 vs. NCBI nr
Match: KAG7027520.1 (Protein RETICULATA-RELATED 3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 623.2 bits (1606), Expect = 1.4e-174
Identity = 327/361 (90.58%), Postives = 340/361 (94.18%), Query Frame = 0


Query: 1   MAAMAQLHCSIRPRQYYNVPNNHAYNNTPAFSFLSNSSAVDSRSRSLSLFNADLTRPSFL 60
           MA+MAQLHCS+RPR YYNVP +HAYN+ PAFSFLSNSSAV+SRSRSLSLFNADLTR  FL
Sbjct: 1   MASMAQLHCSVRPRGYYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFL 60

Query: 61  AKSELSVAGGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGDDDSSRFGVLGLFLNGWRSRV 120
            KSELS+AGGDGGNGVG GGGGGGGGGDSGGWSDDR  GDD SS FGV GLFL GWR+RV
Sbjct: 61  VKSELSLAGGDGGNGVGRGGGGGGGGGDSGGWSDDRADGDDSSS-FGVFGLFLQGWRTRV 120

Query: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180
           AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP
Sbjct: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180

Query: 181 TASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFIYKGTVFATVGLAAGLAGTMLS 240
           TASAG AAKQLPAIF SCPTSHMFEPGAFTVL+RLGT +YKGTVFATVGLAAGL GT LS
Sbjct: 181 TASAGVAAKQLPAIFGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALS 240

Query: 241 NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVLAKGLPPLA 300
           NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQ+LNGLEFVLAKGLPPLA
Sbjct: 241 NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLA 300

Query: 301 FKSSVVVLRCLNNILGGMSFVILARMTGSQSIEEPKPAAAELDSADEKEKLLEGDKDEEL 360
           FKSSVVVLRCLNNILGGMSFVILARMTGSQS+EE KPAA +LD+AD KEKLLEGDKDEEL
Sbjct: 301 FKSSVVVLRCLNNILGGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEEL 360

Query: 361 K 362
           K
Sbjct: 361 K 360

[Close]

BLAST of Tan0017848 vs. NCBI nr
Match: XP_022966374.1 (protein RETICULATA-RELATED 3, chloroplastic [Cucurbita maxima])

HSP 1 Score: 622.5 bits (1604), Expect = 2.3e-174
Identity = 325/361 (90.03%), Postives = 340/361 (94.18%), Query Frame = 0


Query: 1   MAAMAQLHCSIRPRQYYNVPNNHAYNNTPAFSFLSNSSAVDSRSRSLSLFNADLTRPSFL 60
           MA+MAQLHCS+RPR YYNVP++HAYNN PAFSFLSNSSAV+SRSRSLSLFNADLTR  FL
Sbjct: 1   MASMAQLHCSVRPRNYYNVPSSHAYNNPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFL 60

Query: 61  AKSELSVAGGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGDDDSSRFGVLGLFLNGWRSRV 120
            KSELS+AGGDGGNGVG GGGGGGGGGD+GGWSDDR  GDD SS FGV GLFL GWR+RV
Sbjct: 61  VKSELSLAGGDGGNGVGRGGGGGGGGGDNGGWSDDRADGDDSSS-FGVFGLFLQGWRTRV 120

Query: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180
           AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP
Sbjct: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180

Query: 181 TASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFIYKGTVFATVGLAAGLAGTMLS 240
           TASAG AAKQLPAIF SCPTSHMFEPGAFTVL+RLGT +YKGTVFATVGLAAGL GT LS
Sbjct: 181 TASAGVAAKQLPAIFGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALS 240

Query: 241 NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVLAKGLPPLA 300
           NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQ+LNGLEFVLAKGLPPLA
Sbjct: 241 NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLA 300

Query: 301 FKSSVVVLRCLNNILGGMSFVILARMTGSQSIEEPKPAAAELDSADEKEKLLEGDKDEEL 360
           FKSSVVVLRCLNNILGGMSFVILARMTGSQS+E+ KPAA +LD+ D KEKLLEGDKDEEL
Sbjct: 301 FKSSVVVLRCLNNILGGMSFVILARMTGSQSVEDAKPAALDLDATDTKEKLLEGDKDEEL 360

Query: 361 K 362
           K
Sbjct: 361 K 360

[Close]

BLAST of Tan0017848 vs. ExPASy TrEMBL
Match: A0A6J1DQ40 (protein RETICULATA-RELATED 3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023180 PE=3 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 2.7e-176
Identity = 329/362 (90.88%), Postives = 344/362 (95.03%), Query Frame = 0


Query: 1   MAAMAQLHCSIRPRQYYNVPNNHAYNNTPAFSFLSNSSAVDSRSRSLSLFNADLTRPSFL 60
           MAAMAQLHCS+RPR YYNVP NHAYNNTPAFSFLS+SS + SR+RSLSLF+ DLTRPSFL
Sbjct: 1   MAAMAQLHCSLRPRNYYNVPCNHAYNNTPAFSFLSDSSVIQSRTRSLSLFHTDLTRPSFL 60

Query: 61  AKSELSVA-GGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGDDDSSRFGVLGLFLNGWRSR 120
           AKSELS+A GGDGG+GVG  GGGGGGGGDSGGWSDDR HGDDDSS FGVLGLFL GWRSR
Sbjct: 61  AKSELSLAGGGDGGDGVGR-GGGGGGGGDSGGWSDDRAHGDDDSSSFGVLGLFLKGWRSR 120

Query: 121 VAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180
           VAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA
Sbjct: 121 VAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180

Query: 181 PTASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFIYKGTVFATVGLAAGLAGTML 240
           PTA+AG AAKQLPAIF+SCPTSHMFEPGAFTVLDRLGTF+YKGTVFA VGLAAGL GT L
Sbjct: 181 PTAAAGVAAKQLPAIFSSCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTAL 240

Query: 241 SNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVLAKGLPPL 300
           SNGLIKLRKKMDPEFETPNKAPPTLLNA+TWAIHMGVSSNLRYQTLNG+EFVLAKGLPPL
Sbjct: 241 SNGLIKLRKKMDPEFETPNKAPPTLLNALTWAIHMGVSSNLRYQTLNGVEFVLAKGLPPL 300

Query: 301 AFKSSVVVLRCLNNILGGMSFVILARMTGSQSIEEPKPAAAELDSADEKEKLLEGDKDEE 360
           AFKSSVVVLRCLNN+LGG+SFVILAR TGSQSIE+PK AA ELDSADEKEKLLEGDKDEE
Sbjct: 301 AFKSSVVVLRCLNNVLGGVSFVILARATGSQSIEQPKAAAVELDSADEKEKLLEGDKDEE 360

Query: 361 LK 362
           LK
Sbjct: 361 LK 361

[Close]

BLAST of Tan0017848 vs. ExPASy TrEMBL
Match: A0A6J1HTL4 (protein RETICULATA-RELATED 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466041 PE=3 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 1.1e-174
Identity = 325/361 (90.03%), Postives = 340/361 (94.18%), Query Frame = 0


Query: 1   MAAMAQLHCSIRPRQYYNVPNNHAYNNTPAFSFLSNSSAVDSRSRSLSLFNADLTRPSFL 60
           MA+MAQLHCS+RPR YYNVP++HAYNN PAFSFLSNSSAV+SRSRSLSLFNADLTR  FL
Sbjct: 1   MASMAQLHCSVRPRNYYNVPSSHAYNNPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFL 60

Query: 61  AKSELSVAGGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGDDDSSRFGVLGLFLNGWRSRV 120
            KSELS+AGGDGGNGVG GGGGGGGGGD+GGWSDDR  GDD SS FGV GLFL GWR+RV
Sbjct: 61  VKSELSLAGGDGGNGVGRGGGGGGGGGDNGGWSDDRADGDDSSS-FGVFGLFLQGWRTRV 120

Query: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180
           AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP
Sbjct: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180

Query: 181 TASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFIYKGTVFATVGLAAGLAGTMLS 240
           TASAG AAKQLPAIF SCPTSHMFEPGAFTVL+RLGT +YKGTVFATVGLAAGL GT LS
Sbjct: 181 TASAGVAAKQLPAIFGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALS 240

Query: 241 NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVLAKGLPPLA 300
           NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQ+LNGLEFVLAKGLPPLA
Sbjct: 241 NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLA 300

Query: 301 FKSSVVVLRCLNNILGGMSFVILARMTGSQSIEEPKPAAAELDSADEKEKLLEGDKDEEL 360
           FKSSVVVLRCLNNILGGMSFVILARMTGSQS+E+ KPAA +LD+ D KEKLLEGDKDEEL
Sbjct: 301 FKSSVVVLRCLNNILGGMSFVILARMTGSQSVEDAKPAALDLDATDTKEKLLEGDKDEEL 360

Query: 361 K 362
           K
Sbjct: 361 K 360

[Close]

BLAST of Tan0017848 vs. ExPASy TrEMBL
Match: A0A6J1EBN9 (protein RETICULATA-RELATED 3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111432542 PE=3 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 7.3e-174
Identity = 326/361 (90.30%), Postives = 339/361 (93.91%), Query Frame = 0


Query: 1   MAAMAQLHCSIRPRQYYNVPNNHAYNNTPAFSFLSNSSAVDSRSRSLSLFNADLTRPSFL 60
           MA+MAQLHCS+RPR YYNVP +HAYN+ PAFSFLSNSSAV+SRSRSLSLF ADLTR  FL
Sbjct: 1   MASMAQLHCSVRPRGYYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFIADLTRSRFL 60

Query: 61  AKSELSVAGGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGDDDSSRFGVLGLFLNGWRSRV 120
            KSELS+AGGDGGNGVG GGGGGGGGGDSGGWSDDR  GDD SS FGV GLFL GWR+RV
Sbjct: 61  VKSELSLAGGDGGNGVGRGGGGGGGGGDSGGWSDDRADGDDSSS-FGVFGLFLQGWRTRV 120

Query: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180
           AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP
Sbjct: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180

Query: 181 TASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFIYKGTVFATVGLAAGLAGTMLS 240
           TASAG AAKQLPAIF SCPTSHMFEPGAFTVL+RLGT +YKGTVFATVGLAAGL GT LS
Sbjct: 181 TASAGVAAKQLPAIFGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALS 240

Query: 241 NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVLAKGLPPLA 300
           NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQ+LNGLEFVLAKGLPPLA
Sbjct: 241 NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLA 300

Query: 301 FKSSVVVLRCLNNILGGMSFVILARMTGSQSIEEPKPAAAELDSADEKEKLLEGDKDEEL 360
           FKSSVVVLRCLNNILGGMSFVILARMTGSQS+EE KPAA +LD+AD KEKLLEGDKDEEL
Sbjct: 301 FKSSVVVLRCLNNILGGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEEL 360

Query: 361 K 362
           K
Sbjct: 361 K 360

[Close]

BLAST of Tan0017848 vs. ExPASy TrEMBL
Match: A0A0A0L080 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337260 PE=3 SV=1)

HSP 1 Score: 618.6 bits (1594), Expect = 1.6e-173
Identity = 324/364 (89.01%), Postives = 344/364 (94.51%), Query Frame = 0


Query: 1   MAAMAQLHCSIRPRQYYNVPNNHAYNNTPAFSFLSNSSAVDSRSR--SLSLFNADLTRPS 60
           MAAMAQLHCS+RPRQYY+VPNNH +NNTPAFSFLSNSSAV+SRSR  SLSLFNADLTRPS
Sbjct: 1   MAAMAQLHCSVRPRQYYSVPNNHGFNNTPAFSFLSNSSAVESRSRSLSLSLFNADLTRPS 60

Query: 61  FLAKSELSVAGGDGGNGVGHGGGGGGGGGDSGGWSDDRPHG-DDDSSRFGVLGLFLNGWR 120
           FLAKSELS+AGGDGGNGVGHGG GGGGGGD GGWSDDR HG DDDSS FGVLGLFL GWR
Sbjct: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGD-GGWSDDRTHGDDDDSSSFGVLGLFLKGWR 120

Query: 121 SRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL 180
           SRVAADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL
Sbjct: 121 SRVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL 180

Query: 181 LAPTASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFIYKGTVFATVGLAAGLAGT 240
           LAPTA+AG AA++LP+IFASCPTSHMFEPGAFT+LDR+GTF+YKGTVFA VGLAAGL GT
Sbjct: 181 LAPTAAAGVAAQRLPSIFASCPTSHMFEPGAFTLLDRVGTFVYKGTVFAAVGLAAGLVGT 240

Query: 241 MLSNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVLAKGLP 300
            LSNGLI LRKKMDP FETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNG+E+VLAKGLP
Sbjct: 241 ALSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLP 300

Query: 301 PLAFKSSVVVLRCLNNILGGMSFVILARMTGSQSIEEPKPAAAELDSADEKEKLLEGDKD 360
           PLAFKSSVVVLRCLNN+LGGMSFV+LARMTGSQS+E PK A  ELDS DEKEKLLEGDK+
Sbjct: 301 PLAFKSSVVVLRCLNNVLGGMSFVVLARMTGSQSVEGPKTAGVELDSGDEKEKLLEGDKE 360

Query: 361 EELK 362
           EEL+
Sbjct: 361 EELR 363

[Close]

BLAST of Tan0017848 vs. ExPASy TrEMBL
Match: A0A1S3CIX7 (protein RETICULATA-RELATED 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501484 PE=3 SV=1)

HSP 1 Score: 617.5 bits (1591), Expect = 3.6e-173
Identity = 324/364 (89.01%), Postives = 342/364 (93.96%), Query Frame = 0


Query: 1   MAAMAQLHCSIRPRQYYNVPNNHAYNNTPAFSFLSNSSAVDSRSR--SLSLFNADLTRPS 60
           MAAMAQLHCS+RPRQYYNVPNNH +NNTPAFSFLSNSS V+SRSR  SLSLFNADLTR S
Sbjct: 1   MAAMAQLHCSVRPRQYYNVPNNHGFNNTPAFSFLSNSSVVESRSRSLSLSLFNADLTRRS 60

Query: 61  FLAKSELSVAGGDGGNGVGHGGGGGGGGGDSGGWSDDRPHG-DDDSSRFGVLGLFLNGWR 120
           +LAKSELS+AGGDGGNGVGHGG GGGGGGD GGWSDDR HG DDDSS FGVLGLFL GWR
Sbjct: 61  YLAKSELSLAGGDGGNGVGHGGKGGGGGGD-GGWSDDRTHGDDDDSSSFGVLGLFLKGWR 120

Query: 121 SRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL 180
           SRVAADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL
Sbjct: 121 SRVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL 180

Query: 181 LAPTASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFIYKGTVFATVGLAAGLAGT 240
           LAPTA+AGA AKQLP+IFASCPTSHMFEPGAFT+LDRLGTF+YKGTVFA VGLAAGL GT
Sbjct: 181 LAPTAAAGAVAKQLPSIFASCPTSHMFEPGAFTLLDRLGTFVYKGTVFAAVGLAAGLVGT 240

Query: 241 MLSNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVLAKGLP 300
            LSNGLI LRKKMDP FETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNG+E+VLAKGLP
Sbjct: 241 ALSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLP 300

Query: 301 PLAFKSSVVVLRCLNNILGGMSFVILARMTGSQSIEEPKPAAAELDSADEKEKLLEGDKD 360
           PLAFKSSVVVLRCLNN+LGGMSFV+LAR+TGSQS+E PK A  ELDS DEKEKLLEGDK+
Sbjct: 301 PLAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKTAGVELDSGDEKEKLLEGDKE 360

Query: 361 EELK 362
           EEL+
Sbjct: 361 EELR 363

[Close]

BLAST of Tan0017848 vs. TAIR 10
Match: AT3G08640.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 382.1 bits (980), Expect = 4.9e-106
Identity = 192/267 (71.91%), Postives = 225/267 (84.27%), Query Frame = 0


Query: 68  AGGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGDDDSSRFGVLGLFLNGWRSRVAADPQFP 127
           AGG GG   G+ GGG G GG  GG+        ++SS +G +GLF+ GWRSRVAADPQFP
Sbjct: 60  AGGGGGGSTGNNGGGSGSGGGGGGFGGSGGEASEESSPWGPIGLFIQGWRSRVAADPQFP 119

Query: 128 FKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGAA 187
           FKVLMEE+VG+SACVLGDMASRPNFGLNELDFVFSTLVVGSILNF LMY+LAPTA+   +
Sbjct: 120 FKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAATLGS 179

Query: 188 AKQLPAIFASCPTSHMFEPGAFTVLDRLGTFIYKGTVFATVGLAAGLAGTMLSNGLIKLR 247
           ++ LP IF +CP+SHMFE G+FTV++R GT +YKG VFA+VGLAAGL GT +SNGLI LR
Sbjct: 180 SQTLPGIFRNCPSSHMFEQGSFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLR 239

Query: 248 KKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVLAKGLPPLAFKSSVVV 307
           KKMDP FETPNK PPT+LN++TWA HMGVS+N RYQTLNG+EF+LAK LPPL FK+SV+V
Sbjct: 240 KKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIEFLLAKVLPPLVFKTSVIV 299

Query: 308 LRCLNNILGGMSFVILARMTGSQSIEE 335
           LRC NN+ GGMSFV+LARMTGSQS+EE
Sbjct: 300 LRCANNVAGGMSFVLLARMTGSQSVEE 326

[Close]

BLAST of Tan0017848 vs. TAIR 10
Match: AT3G08630.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 373.6 bits (958), Expect = 1.8e-103
Identity = 202/308 (65.58%), Postives = 240/308 (77.92%), Query Frame = 0


Query: 43  RSRSLSLFNADLTRPSFLAKSELSVAGGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGDDD 102
           R+ S+S  + + + P+ +    +  AGG GG  +G+ GGG G GG  GG+       +++
Sbjct: 39  RNGSVSSLHTNFSSPNIM----VPCAGGGGGGSIGNHGGGSGSGGGGGGYGGSE---EEE 98

Query: 103 SSRFGVLGLFLNGWRSRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFS 162
           SS +G LGLF+ GWRSRVAAD QFPFKVLME LVGVSA VLGDMASRPNFGLNELDFVFS
Sbjct: 99  SSPWGPLGLFIQGWRSRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFS 158

Query: 163 TLVVGSILNFTLMYLLAPTASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFIYKG 222
           TLVVGSILNFTLMYLLAP+A +  ++  LP IF SCP+SHMFE G FT+++R GT +YKG
Sbjct: 159 TLVVGSILNFTLMYLLAPSAISHGSSNLLPGIFRSCPSSHMFEQGNFTLMNRFGTLVYKG 218

Query: 223 TVFATVGLAAGLAGTMLSNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRY 282
            VFATVGLAAGL GT +SNGLI LRKK+DP FETPNK PPTLLN++TWA HMGVS+N+RY
Sbjct: 219 MVFATVGLAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRY 278

Query: 283 QTLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILGGMSFVILARMTGSQSIEEPKPAAAEL 342
           QTLNG EF+L K LPPL FK+SV+ LR +NN+LGGMSFV LARMTGSQS+EE K    E+
Sbjct: 279 QTLNGAEFLLEKSLPPLVFKTSVIALRVVNNVLGGMSFVTLARMTGSQSVEEEK--KIEM 337

Query: 343 DSADEKEK 351
               EKEK
Sbjct: 339 SEISEKEK 337

[Close]

BLAST of Tan0017848 vs. TAIR 10
Match: AT2G37860.3 (Protein of unknown function (DUF3411) )

HSP 1 Score: 105.9 bits (263), Expect = 6.8e-23
Identity = 104/325 (32.00%), Postives = 151/325 (46.46%), Query Frame = 0


Query: 70  GDGGNGV-GHGGGGGGG-GGDSGGWSDDRPHGD--------------------------- 129
           GDG NG  G+GGGGGGG GG+  G  +D    +                           
Sbjct: 112 GDGFNGSDGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLE 171

Query: 130 ----------------DDSSRFGVLGLFLNGW---RSRVAADPQFPFKVLMEELVGVSAC 189
                           D  S  G+LG  +  W   R+R+ ADP F FK+  E ++     
Sbjct: 172 AAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCA 231

Query: 190 VLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA-------PTASAGAAAKQLPAI 249
            + ++  R      E +   + L+VG+++N  L+ +LA       P+AS G   + + A 
Sbjct: 232 TVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFA- 291

Query: 250 FASCPTSHMFE---PGA-FTVLDRLGTFIYKGTVFATVGLAAGLAGTMLSNGLIKLRKKM 309
           + + P+S +FE   PG  F+   RL T+ YKG ++  VG   G+ G  ++N LI   K+ 
Sbjct: 292 YNALPSS-VFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIAN-LIMTAKRN 351

Query: 310 DPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVL-----AKGLPPLAFKSSV 331
             + E     PP + +A  W + + VSSN RYQ +NGLE V+     AK  PP A   +V
Sbjct: 352 INKSEENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLERVVEASPFAKKFPPAAMAFTV 411

[Close]

BLAST of Tan0017848 vs. TAIR 10
Match: AT5G22790.1 (reticulata-related 1 )

HSP 1 Score: 102.1 bits (253), Expect = 9.9e-22
Identity = 103/324 (31.79%), Postives = 148/324 (45.68%), Query Frame = 0


Query: 69  GGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGD--------------------------DD 128
           GG+GGNG G GGGG G G D    +D     +                          + 
Sbjct: 113 GGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPEDMLEA 172

Query: 129 SSRFGVLGLFL--------NGW------------RSRVAADPQFPFKVLMEELVGVSACV 188
           +   G+  LFL        + W            R+R+ ADP F FKV  E  +      
Sbjct: 173 AKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSFLFKVGTEVAIDSCCAT 232

Query: 189 LGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGAAA-------KQLPAIF 248
             ++  R     +E +   + L+VG +++  L+ LLAP A  G  +       K L    
Sbjct: 233 FAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLFKDLKRAC 292

Query: 249 ASCPTSHMFE---PGA-FTVLDRLGTFIYKGTVFATVGLAAGLAGTMLSNGLIKLRKKMD 308
           AS P+S +FE   PG  F+V  R+ TF YKG ++ +VG   GL G  ++N LI   K+  
Sbjct: 293 ASLPSS-VFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIAN-LIMTAKRSV 352

Query: 309 PEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVL-----AKGLPPLAFKSSVV 331
            + E     PP   +A  W + +G+SSN RYQ +NGLE V+     AK +P +A   +V 
Sbjct: 353 KKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLERVVEGSTAAKRIPVVAMAFTVG 412

[Close]

BLAST of Tan0017848 vs. TAIR 10
Match: AT5G12470.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 95.5 bits (236), Expect = 9.2e-20
Identity = 95/326 (29.14%), Postives = 138/326 (42.33%), Query Frame = 0


Query: 65  LSVAGGDGGNGVGHGGGGGGGGGDSGGWSDDRPHGDDDSSR------------------- 124
           LS + G+GG+    GG  GGGGG  GG +D   HGD+D  R                   
Sbjct: 60  LSASSGNGGSDNNGGGLSGGGGGGDGGKNDGDGHGDEDRDRNRNEAMLLLKESGIELESL 119

Query: 125 --------------FGVLGLFL--------------NGWRSRVAADPQFPFKVLMEELVG 184
                           V+  FL               G+R R+ AD  F  K+ ME  VG
Sbjct: 120 PKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGFRERLLADDLFMAKLAMECGVG 179

Query: 185 VSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAS----AGAAAKQLPA 244
           +      +   R     NEL+ VF+ + +  I +F L+YL APT S        A  +  
Sbjct: 180 IFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGISK 239

Query: 245 IFASCPTSHM---FEPGAFTVLDRLGTFIYKGTVFATVGLAAGLAGTMLSNGLIKLRKKM 304
            F +CP +         ++T+L RLG     G     VG  + L GT ++N  IK RK +
Sbjct: 240 FFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIKARKAV 299

Query: 305 DPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGLEFVLAKGLPP------LAFKSS 331
           D   E   +  P +  ++ + ++M VSSNLRYQ + G+  +  + L P      LA  + 
Sbjct: 300 DQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGV--IEQRLLEPMLHQHKLALSAL 359

The following BLAST results are available for this feature:

BLAST of Tan0017848 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9Z2	7.0e-105	71.91	Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9C9Z3	2.5e-102	65.58	Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
B9DFK5	9.6e-22	32.00	Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=...	[more]
Q9FGP9	1.4e-20	31.79	Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q94CJ5	1.3e-18	29.14	Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]

BLAST of Tan0017848 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156248.1	5.5e-176	90.88	protein RETICULATA-RELATED 3, chloroplastic [Momordica charantia]	[more]
XP_038883563.1	1.2e-175	90.33	protein RETICULATA-RELATED 3, chloroplastic [Benincasa hispida]	[more]
XP_023517477.1	8.0e-175	90.58	protein RETICULATA-RELATED 3, chloroplastic-like [Cucurbita pepo subsp. pepo] >X...	[more]
KAG7027520.1	1.4e-174	90.58	Protein RETICULATA-RELATED 3, chloroplastic, partial [Cucurbita argyrosperma sub...	[more]
XP_022966374.1	2.3e-174	90.03	protein RETICULATA-RELATED 3, chloroplastic [Cucurbita maxima]	[more]

BLAST of Tan0017848 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQ40	2.7e-176	90.88	protein RETICULATA-RELATED 3, chloroplastic OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1HTL4	1.1e-174	90.03	protein RETICULATA-RELATED 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EBN9	7.3e-174	90.30	protein RETICULATA-RELATED 3, chloroplastic-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A0A0L080	1.6e-173	89.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337260 PE=3 SV=1	[more]
A0A1S3CIX7	3.6e-173	89.01	protein RETICULATA-RELATED 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501...	[more]

BLAST of Tan0017848 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08640.1	4.9e-106	71.91	Protein of unknown function (DUF3411)	[more]
AT3G08630.1	1.8e-103	65.58	Protein of unknown function (DUF3411)	[more]
AT2G37860.3	6.8e-23	32.00	Protein of unknown function (DUF3411)	[more]
AT5G22790.1	9.9e-22	31.79	reticulata-related 1	[more]
AT5G12470.1	9.2e-20	29.14	Protein of unknown function (DUF3411)	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021825	Protein RETICULATA-related	PFAM	PF11891	RETICULATA-like	coord: 119..288 e-value: 6.4E-66 score: 221.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..361
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 339..361
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..99
None	No IPR available	PANTHER	PTHR31620:SF17	PROTEIN RETICULATA-RELATED 3, CHLOROPLASTIC-LIKE	coord: 1..344
None	No IPR available	PANTHER	PTHR31620	PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED	coord: 1..344

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0017848.1	Tan0017848.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane