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Tan0017840 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCCACACTATATTTTTTTCTGCCCCGCGAAAGCCAATTTTTATTACCAGTTCCATAGGAACGAATTACCGGCCATCTATGGAATCACTACGAGCTTCAGCTGATTGCAAACCCTCGTTTCAAAGTCGCCATTGTGAGATATGATTTACGATCGATGCATAATATGAAGAAAAAGGAGAAGAAAAGCGCATACGAGTACTGCCTCGTCTGCAAATTAAACCACGATCAAGGGCAGCGCCATAAGTATTTTCCCAACCACAAAAAATCTCTTTCTACTTTCCTATCTCGGTTCGAGACCAAGCTCTCCGATGTTCGCTTCTTTCTCAATACCCCTTTTCGCCTCTTGTCCGAGTATGCCTCTCGCAATCGGTTTTGGTGCATCTTCTGCGATTCTGAAGTCCATGAGAATGACAGTTCCTTCGCATGGTATTAATCCGCTGGCTTTTTTGTATATTTCTTTGTTTCTTGAAGTAATTATGATGTATATTTATTGTTGCTGGGAAATTTGATAATCAATTCTGCTAGGTCATATACTAATTACGGTTGAACTCCTGTGAGGGCTTTTCTTTTTAGACTGAATTTCATTAATATAATGAAATATACAAAAAGGGAAGGAAAGTCATAACCGAAGCTAATGGGGTTTAAATAAAAATGCCCTCCACCTAGTTCTTTGGAAGTGTAATTACAAAATACATTGTGAAGCTTACACTAAGAGGCAATTGTAATAAAGATATGAAAGTAGAGCCACACTACAATTGTAATTACAAAATACATTGTTAAGCTTACATGTAGTTTCTTCCCAATCCCTAAAATTTGTGTGGTTCCTCTCCCCATCCAAGCATTCCATAAGAAGCTTCTGATGATGTTGAGCCAAAAGGAATTTAGTTCTTAATGAGCAAAGTATGCAGTACGATTTTCACAAGGACCATTAGGCATTATGTTGGGGCAAGGCCATTGGTCTAGTAACTGTAATTTTTCTTTAAGGGTATAGTTAGAGAGCTTCAGGATTTTGTGTATTTTATTCGTTTTCTCGATGGCTTTTTTTAGATCGAAATTTTTGCAGTCACTCTCTGTTTAAAATTAATGTTACATTACATGGAGGGTTGTTGAAGTTCCGTTGGCTGACTGCTAGATTTGGTAGGTGCCATGTCTTCTTTTCCTCCCTCAGTGCAGTAGCAGTTATTCTTCATGAATATGTATTTCTGTTTCTAATTTCAAGAAACGTATGCAGGCAATTATCGTGTTTTACATTCTTTATCTCATGTTTTAAGATATTGTAACAGTAGCAATGCAATTAAACACCTGGCCAGTTCGGATCATCTGAAGAATTTGAAGCATTTCTTATGGAAGTATGGTGGTGATATGGACCGTCTGGATAATTATAGGATTTTGGAAGTTGATGTAGCAAAGGTAATCACGAGTCTTCACTTTTTATTAGGTTCAAATTAATTGGAACCATAGTATCCAGGTGTATCATGCAATCCACATTTAGTTCTCTAATATTTAATTGAATTAACAAAGAGAAACAAGCCTAGTATCCTATCTGCATTTTTCTGTGTCGTGTTTGAAAAGCAATGAGATGCAGAAGTTCATTTTTACTGTGATTACTGATTAGTCTATTGATTTGAATTGATGTTCGTTGATGACAGTGGGAGAAGAAGTGCAAAGTGCAAAGCGTAGCTGCTTCATCCAGTCTTGGACCTACAAATGATATCCACAATCAAGTCCAATATGGAAATTTTGATAGTTTTGGGAAAAAAATTATCCACTCTGTTGAATCTAGTTCATCAATTAGTGTTTTGCCTTTACACAATTATACAAATGAGTATCAGGTATCCAATTCATCCTATTCAGGATCCTCTGGTGTTTCGAATTTCGTTTCGTTTCCACATGATTCCACTGTACCAATGCATGCTGGTTCATGTTCTGGTGCGAATGTATGGAGCTCAAAGAATTTAACATGTAAGCTTCCCCTTTATATTAAACCTGTTTTCTTTGATTTCTTATCATAAAGTCCTAAAATAGTGTTCAAACCTGTAAAATACTCCTGCTACATTGACTGTGATTCAGCTAATGAGGACAACAAGCATTGCAATCTGAATAGTGGTAGAACGTGCACTCCTAATGGTCATTTCAGTGGTCAGGAGGTAAGTTTGGTTATCCACTGGTGGGGCTTGCCTTAACTGTAATCTTTTTTGCAACTTCCCTTCTGGGTCCTTTATTCTGTAAATTTCATACATAAACGAAATCGTTGTTTATCTCAAAAGGAGAAATAGCCAACTAACTGTCAGATTTACAAGTTCGTTAATATATTTATAGAGGCTCAAAGGTTCCATTCGAAGCTGGATGGGATGGCACGACATACTGTTATTTTTCTATCAATGAGTCTCTGACAATCAACTCTTTATTCTTGGATAGCATCTTCATAGTCCATTTGATGTTATGTCTTGTCTTTCTTCATGAGTTTGATTCTTTTTCATACTACACATAAATTGTTTACTATCGACATTTCTAGTAAATGTATGACCTATTTGATATAGATGTACGAGATGCATCAGAATGGAAGAACTGTGAATGACGAAAACGATTCTCAGGGTATGAAATTTTATGAAATCTTATTCTCATTGTAATACTGATTCTTGTAGTCTTAGTGATACTTTTGCAAAAAAGGCAAACTGGAACTATACCATTAAAGTTATGCACATTTCATACTCTGAATATATCTTCATCTAAACTGTATGGTGGTGGTATGGCTTGCATCTATTTGCTATCTTTACTCAGGTTTGCAGACCCTCACTCGGATTTCTAATATTGTTTCTGGAGATTCTGGAGATTCTGGAGGAAATATTCATTCTCGGATGCTGCCTCCTTGGCTTGAAAACTCTGAAGATATTGGGTTTAAGGTTCAAATAAGACCAATGGTTGGGAGTGGTGTTTCTTCTTTTAATGAATCTGCAAAGTCCAAGAAACTGAACCCCAAACGGGTAGGAGCTGCATGGGCAGAAAAAAGAAAGATGGAGCTGGAAATGGAGAAGAGAGGAGAAATTGTCCAAAGTTACGGTGATGAGAATTGGCTTCCTAATTTTGGTAGAGTGTGGCAATCTGGTAGCCGTAAAGCATCTAGAAAGGAATTTGAGAAGGAGAAATCAAAACTCCTGATGGTTGAAAATCCACCTGAAACAAATGTCGATATTCAACCATACATAAGCAAACGGATGGTGAGCTCCATTTTCAGCATATTTATTGCAGTTCTGATGTTTCAATTTATATCATTTTGACACATTTTTTGTTCTATATCTACTGTTCAAAATTCCTCCACGCCTGTGTGTGTGTATTAATTTTTATAAAATGTTATTTTACCATGTGTTTCCAACCGGGCCTAGTTTTTATGATGCAATGACGAAGTGGGAAGTTCCAATATGTGACAATATTTTTAAGGTGATGTTTTGGGCGCTCTATTTTCTAGATAAATAAACCATCAAGTTGTTGCAAAATTTGAAATTCAAAGAAAAAAAAGTTTAATACATTGGAAGGTTATATAGGATACCTAGAAAGTGATTATTTTTCCACATATATCTATGGATCAATACATTTCTACACGAGAAGGAAAAAGAAACAAAGAGAGAGGAAAAGGAAAGAAAAACGAGATTGAATGAACGGAAACTGAGCACAAGTTGTCAAGTACTCTCTAGTCTCTTCTTGCATCTTGAATATTTCTTGTTTTTTTTTGTTTATGCGAGTTTTTGATTGCTGCCGCAGTATTGTACCATGTAGGGACTTTTTGTTTATATTTGGATTGCTTTCTAGACTGATTTACATGTTATGTCCCTATTCTTTGTTCTTGCAGCGAAAAGATCGGGAGAATGAGGATGATACTGCCAATCACACAAGCATATAAAACAACGATGTTCAAAAGCTTCTCATCTAGAGAATCACTGTATATGCACATTCCTTGCCAAGCTTGGTTTGGAGATAGAATTAGGCTGGAGGCTGATAGGAAACTTCAGAGGCAGACTGAGATTCCACCTCGTCATTAGTTTATTGACAATTCGCTCAAATCTTTTGTAGTAAACATGACTTAAATTTTCTCAAGAAATCCGATGAAAAGGATTTCTCAAGATATCAGTGGTATTTGAGAACAGGATTCTTTTAACCTATACTGCATCATCAACGCTGTTCAAAGGATGAAATTGTGTTGGATCACTCTGGACATCACTATTGAATTTAATTGCGAGATAGTGTTTGACCACACTGTTAAAGGCATTGCTTTATGTTTTTATCTCCTATTGCACTTGCACCCACTCCTTATATCTTCTGCTATCGAAGTTGTAAACTGAAACAAGTATATATTTCGTAAATATGTAGCTTGACAGCCTTTTGGTTTTCTTCTGCAATGCTGGTTGGGCAAGGTGCGGATGCAAATCTTGATCTTATGTATGCAAGTCAGAATATATAATTACTATTTAAAAATATTTGTTTCCCCCAAACACCTGCTAACTCGTGTTTG GATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCCACACTATATTTTTTTCTGCCCCGCGAAAGCCAATTTTTATTACCAGTTCCATAGGAACGAATTACCGGCCATCTATGGAATCACTACGAGCTTCAGCTGATTGCAAACCCTCGTTTCAAAGTCGCCATTGTGAGATATGATTTACGATCGATGCATAATATGAAGAAAAAGGAGAAGAAAAGCGCATACGAGTACTGCCTCGTCTGCAAATTAAACCACGATCAAGGGCAGCGCCATAAGTATTTTCCCAACCACAAAAAATCTCTTTCTACTTTCCTATCTCGGTTCGAGACCAAGCTCTCCGATGTTCGCTTCTTTCTCAATACCCCTTTTCGCCTCTTGTCCGAGTATGCCTCTCGCAATCGGTTTTGGTGCATCTTCTGCGATTCTGAAGTCCATGAGAATGACAGTTCCTTCGCATGTAGCAATGCAATTAAACACCTGGCCAGTTCGGATCATCTGAAGAATTTGAAGCATTTCTTATGGAAGTATGGTGGTGATATGGACCGTCTGGATAATTATAGGATTTTGGAAGTTGATGTAGCAAAGTGGGAGAAGAAGTGCAAAGTGCAAAGCGTAGCTGCTTCATCCAGTCTTGGACCTACAAATGATATCCACAATCAAGTCCAATATGGAAATTTTGATAGTTTTGGGAAAAAAATTATCCACTCTGTTGAATCTAGTTCATCAATTAGTGTTTTGCCTTTACACAATTATACAAATGAGTATCAGGTATCCAATTCATCCTATTCAGGATCCTCTGGTGTTTCGAATTTCGTTTCGTTTCCACATGATTCCACTGTACCAATGCATGCTGGTTCATGTTCTGGTGCGAATGTATGGAGCTCAAAGAATTTAACATCTAATGAGGACAACAAGCATTGCAATCTGAATAGTGGTAGAACGTGCACTCCTAATGGTCATTTCAGTGGTCAGGAGATGTACGAGATGCATCAGAATGGAAGAACTGTGAATGACGAAAACGATTCTCAGGGTTTGCAGACCCTCACTCGGATTTCTAATATTGTTTCTGGAGATTCTGGAGATTCTGGAGGAAATATTCATTCTCGGATGCTGCCTCCTTGGCTTGAAAACTCTGAAGATATTGGGTTTAAGGTTCAAATAAGACCAATGGTTGGGAGTGGTGTTTCTTCTTTTAATGAATCTGCAAAGTCCAAGAAACTGAACCCCAAACGGGTAGGAGCTGCATGGGCAGAAAAAAGAAAGATGGAGCTGGAAATGGAGAAGAGAGGAGAAATTGTCCAAAGTTACGGTGATGAGAATTGGCTTCCTAATTTTGGTAGAGTGTGGCAATCTGGTAGCCGTAAAGCATCTAGAAAGGAATTTGAGAAGGAGAAATCAAAACTCCTGATGGTTGAAAATCCACCTGAAACAAATGTCGATATTCAACCATACATAAGCAAACGGATGCGAAAAGATCGGGAGAATGAGGATGATACTGCCAATCACACAAGCATATAAAACAACGATGTTCAAAAGCTTCTCATCTAGAGAATCACTGTATATGCACATTCCTTGCCAAGCTTGGTTTGGAGATAGAATTAGGCTGGAGGCTGATAGGAAACTTCAGAGGCAGACTGAGATTCCACCTCGTCATTAGTTTATTGACAATTCGCTCAAATCTTTTGTAGTAAACATGACTTAAATTTTCTCAAGAAATCCGATGAAAAGGATTTCTCAAGATATCAGTGGTATTTGAGAACAGGATTCTTTTAACCTATACTGCATCATCAACGCTGTTCAAAGGATGAAATTGTGTTGGATCACTCTGGACATCACTATTGAATTTAATTGCGAGATAGTGTTTGACCACACTGTTAAAGGCATTGCTTTATGTTTTTATCTCCTATTGCACTTGCACCCACTCCTTATATCTTCTGCTATCGAAGTTGTAAACTGAAACAAGTATATATTTCGTAAATATGTAGCTTGACAGCCTTTTGGTTTTCTTCTGCAATGCTGGTTGGGCAAGGTGCGGATGCAAATCTTGATCTTATGTATGCAAGTCAGAATATATAATTACTATTTAAAAATATTTGTTTCCCCCAAACACCTGCTAACTCGTGTTTG ATGCATAATATGAAGAAAAAGGAGAAGAAAAGCGCATACGAGTACTGCCTCGTCTGCAAATTAAACCACGATCAAGGGCAGCGCCATAAGTATTTTCCCAACCACAAAAAATCTCTTTCTACTTTCCTATCTCGGTTCGAGACCAAGCTCTCCGATGTTCGCTTCTTTCTCAATACCCCTTTTCGCCTCTTGTCCGAGTATGCCTCTCGCAATCGGTTTTGGTGCATCTTCTGCGATTCTGAAGTCCATGAGAATGACAGTTCCTTCGCATGTAGCAATGCAATTAAACACCTGGCCAGTTCGGATCATCTGAAGAATTTGAAGCATTTCTTATGGAAGTATGGTGGTGATATGGACCGTCTGGATAATTATAGGATTTTGGAAGTTGATGTAGCAAAGTGGGAGAAGAAGTGCAAAGTGCAAAGCGTAGCTGCTTCATCCAGTCTTGGACCTACAAATGATATCCACAATCAAGTCCAATATGGAAATTTTGATAGTTTTGGGAAAAAAATTATCCACTCTGTTGAATCTAGTTCATCAATTAGTGTTTTGCCTTTACACAATTATACAAATGAGTATCAGGTATCCAATTCATCCTATTCAGGATCCTCTGGTGTTTCGAATTTCGTTTCGTTTCCACATGATTCCACTGTACCAATGCATGCTGGTTCATGTTCTGGTGCGAATGTATGGAGCTCAAAGAATTTAACATCTAATGAGGACAACAAGCATTGCAATCTGAATAGTGGTAGAACGTGCACTCCTAATGGTCATTTCAGTGGTCAGGAGATGTACGAGATGCATCAGAATGGAAGAACTGTGAATGACGAAAACGATTCTCAGGGTTTGCAGACCCTCACTCGGATTTCTAATATTGTTTCTGGAGATTCTGGAGATTCTGGAGGAAATATTCATTCTCGGATGCTGCCTCCTTGGCTTGAAAACTCTGAAGATATTGGGTTTAAGGTTCAAATAAGACCAATGGTTGGGAGTGGTGTTTCTTCTTTTAATGAATCTGCAAAGTCCAAGAAACTGAACCCCAAACGGGTAGGAGCTGCATGGGCAGAAAAAAGAAAGATGGAGCTGGAAATGGAGAAGAGAGGAGAAATTGTCCAAAGTTACGGTGATGAGAATTGGCTTCCTAATTTTGGTAGAGTGTGGCAATCTGGTAGCCGTAAAGCATCTAGAAAGGAATTTGAGAAGGAGAAATCAAAACTCCTGATGGTTGAAAATCCACCTGAAACAAATGTCGATATTCAACCATACATAAGCAAACGGATGCGAAAAGATCGGGAGAATGAGGATGATACTGCCAATCACACAAGCATATAA MHNMKKKEKKSAYEYCLVCKLNHDQGQRHKYFPNHKKSLSTFLSRFETKLSDVRFFLNTPFRLLSEYASRNRFWCIFCDSEVHENDSSFACSNAIKHLASSDHLKNLKHFLWKYGGDMDRLDNYRILEVDVAKWEKKCKVQSVAASSSLGPTNDIHNQVQYGNFDSFGKKIIHSVESSSSISVLPLHNYTNEYQVSNSSYSGSSGVSNFVSFPHDSTVPMHAGSCSGANVWSSKNLTSNEDNKHCNLNSGRTCTPNGHFSGQEMYEMHQNGRTVNDENDSQGLQTLTRISNIVSGDSGDSGGNIHSRMLPPWLENSEDIGFKVQIRPMVGSGVSSFNESAKSKKLNPKRVGAAWAEKRKMELEMEKRGEIVQSYGDENWLPNFGRVWQSGSRKASRKEFEKEKSKLLMVENPPETNVDIQPYISKRMRKDRENEDDTANHTSI Homology
BLAST of Tan0017840 vs. ExPASy Swiss-Prot
Match: F4JRR5 (TITAN-like protein OS=Arabidopsis thaliana OX=3702 GN=TTL PE=2 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 2.0e-90 Identity = 197/438 (44.98%), Postives = 262/438 (59.82%), Query Frame = 0
BLAST of Tan0017840 vs. ExPASy Swiss-Prot
Match: Q86UT8 (Centrosomal AT-AC splicing factor OS=Homo sapiens OX=9606 GN=CENATAC PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 5.3e-06 Identity = 37/106 (34.91%), Postives = 49/106 (46.23%), Query Frame = 0
BLAST of Tan0017840 vs. ExPASy Swiss-Prot
Match: Q4VA36 (Centrosomal AT-AC splicing factor OS=Mus musculus OX=10090 GN=Cenatac PE=2 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 1.0e-04 Identity = 47/149 (31.54%), Postives = 61/149 (40.94%), Query Frame = 0
BLAST of Tan0017840 vs. NCBI nr
Match: XP_023519525.1 (TITAN-like protein isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 745.3 bits (1923), Expect = 2.9e-211 Identity = 373/443 (84.20%), Postives = 395/443 (89.16%), Query Frame = 0
BLAST of Tan0017840 vs. NCBI nr
Match: XP_038894287.1 (TITAN-like protein isoform X1 [Benincasa hispida] >XP_038894288.1 TITAN-like protein isoform X1 [Benincasa hispida] >XP_038894289.1 TITAN-like protein isoform X1 [Benincasa hispida] >XP_038894290.1 TITAN-like protein isoform X1 [Benincasa hispida] >XP_038894291.1 TITAN-like protein isoform X1 [Benincasa hispida]) HSP 1 Score: 740.3 bits (1910), Expect = 9.4e-210 Identity = 370/443 (83.52%), Postives = 396/443 (89.39%), Query Frame = 0
BLAST of Tan0017840 vs. NCBI nr
Match: XP_022924143.1 (TITAN-like protein isoform X4 [Cucurbita moschata]) HSP 1 Score: 734.6 bits (1895), Expect = 5.2e-208 Identity = 368/443 (83.07%), Postives = 392/443 (88.49%), Query Frame = 0
BLAST of Tan0017840 vs. NCBI nr
Match: XP_038894293.1 (TITAN-like protein isoform X2 [Benincasa hispida]) HSP 1 Score: 734.2 bits (1894), Expect = 6.7e-208 Identity = 369/443 (83.30%), Postives = 395/443 (89.16%), Query Frame = 0
BLAST of Tan0017840 vs. NCBI nr
Match: XP_023000902.1 (TITAN-like protein [Cucurbita maxima]) HSP 1 Score: 732.6 bits (1890), Expect = 2.0e-207 Identity = 368/451 (81.60%), Postives = 395/451 (87.58%), Query Frame = 0
BLAST of Tan0017840 vs. ExPASy TrEMBL
Match: A0A6J1EBJ7 (TITAN-like protein isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111431668 PE=4 SV=1) HSP 1 Score: 734.6 bits (1895), Expect = 2.5e-208 Identity = 368/443 (83.07%), Postives = 392/443 (88.49%), Query Frame = 0
BLAST of Tan0017840 vs. ExPASy TrEMBL
Match: A0A6J1KEY9 (TITAN-like protein OS=Cucurbita maxima OX=3661 GN=LOC111495202 PE=4 SV=1) HSP 1 Score: 732.6 bits (1890), Expect = 9.5e-208 Identity = 368/451 (81.60%), Postives = 395/451 (87.58%), Query Frame = 0
BLAST of Tan0017840 vs. ExPASy TrEMBL
Match: A0A0A0LUE2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050510 PE=4 SV=1) HSP 1 Score: 727.2 bits (1876), Expect = 4.0e-206 Identity = 366/444 (82.43%), Postives = 392/444 (88.29%), Query Frame = 0
BLAST of Tan0017840 vs. ExPASy TrEMBL
Match: A0A6J1EDY9 (TITAN-like protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431668 PE=4 SV=1) HSP 1 Score: 711.8 bits (1836), Expect = 1.7e-201 Identity = 356/427 (83.37%), Postives = 378/427 (88.52%), Query Frame = 0
BLAST of Tan0017840 vs. ExPASy TrEMBL
Match: A0A6J1E853 (TITAN-like protein isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111431668 PE=4 SV=1) HSP 1 Score: 711.8 bits (1836), Expect = 1.7e-201 Identity = 356/427 (83.37%), Postives = 378/427 (88.52%), Query Frame = 0
BLAST of Tan0017840 vs. TAIR 10
Match: AT4G24900.1 (unknown protein; Has 119 Blast hits to 96 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 334.3 bits (856), Expect = 1.4e-91 Identity = 197/438 (44.98%), Postives = 262/438 (59.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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