Tan0017807 (gene) Snake gourd v1

Overview
NameTan0017807
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTranslation initiation factor IF-2
LocationLG02: 94211089 .. 94215054 (-)
RNA-Seq ExpressionTan0017807
SyntenyTan0017807
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGAGTCCTGACAAAAAAAAAAAAGAAGAAAGAAGAAGAAGAAAAAAAAAGGTGATTTTTTGCTCTTCATCTGTTAAATAACCCTCAAATTGCTGTTGAAACGAAAAACAACCAAATTAATTGGCGAAATTTTGATACTTTTTCGCCCACATTTCATTTTATTATCCTATTCTCAAGCAATTAGAATAAATATATCTTCAGCTGGAAAAGGAAAAAAAACGACTGTGAGAAGAAGAAGAACGAAGAAGACGAGAGGAAGAAGATCGTTTCTTCTGATAGAAATAGTCTAAATTAATATGCAAAAACAGAAACCCATTATGGTTTCAGACACCAAACCCACTGTTTCGAAGGTCAAACCAGGTAATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAATAAGAAGAAGATTATCGAAAGTTCCATCAAGAACTCAATTCCCTCTTCCAAACACAAATCCGTCTCCCTTCTCACCAAATCCGAGGTACTCATTTTGGAAATTTCAGGTTTATTGCTTTATTCAGATTTAGCTGTCACGAATTGGGGATTTTATGTTTTTTAACTGTTTTTTCTCCTCTGTCTGAATTGTTTTGTGCTTTGAAACGCATCTAATTTCTCAATTGGTAACCGTAACGGATTTGGGGTTATTCAAATTTGGAGTTTGTGGGGTTTCTAATTCGTAATTAATTGCGGGTTTTCTGAAATTTGGATTGTCCCAATTGGGCTGTTGTTCCTTTGCTTTCTCTAAAATCATTTGGGTTTAGATTCTGAATGGTTTCGTTGGTTTTCTTTTTGGAAGGTGAAGTCAAAAACAATAACGAGTTCTTCAAAGACAACAACAAAAACTACTACTACAACTACTACTGCTGCTAAAGTGAGAGAGAAGAAAGTGTTCAATTTGACTGGTCAGAAATATGATCCACCTGAAGAGGTTTGTGCTTTCTTCCTTCATAGTTTGGTTTTAGTTTATGTGATTGATGGACTCATCATTCTTGCTGTTTTGTGCACAGAGAGAGCCGCTTCGGATATTTTATGAGTCCTTGTCGAAACAGATACCAACAAGTGAAATGGCAGAGTTTTGGTGCGGTTTGTTTTCTGATATTCTTTTGAGCATTCTCTGTCTGTTTAATCCTTTGAGTAATTCGTAAACTGTGCGTATAGAATTGGGGCAGCCTTGGAATTATGTTGTTCTTTTATTTCGTTTCGTGCACGATCCTTAGGCTGATGATAATCTGTGATACTCTCTGATATGATGCTTCATCAATCATGATGTTCTGAGTGCTTCTTTCAATGGCAGTTGGTTTCGTTTAGTTAGACGAAAAAGCTACTGGTACTAGTGAAGTCATGTTTATCTACTACTACTGTAGTTGCTAAATTTGAATTATAGAGACAACTGGTATAATTCTTTTAGATTGTAGTCCGTTCTTCTAGTTGGTTGAAGATTCCTTTGTGGACTTGTTTTTTGTATTCCCTTGTAAATTCTTTCATTTTTCTCAATTAAAGCTCAATTTTTTAACAAAAAAGTTATAGAGGGACTAAATGCAACTGAAGTCATACATGAGAGACTGCATTTTAGGGGCAGGTAACTTCTGTCAAACAACTTTCCAACTAAGTGGTTTCTTTGTGTGAGGGTTATTCCAATTTTTTTTGTGACACTTGCTCAATATTTTTGTTACTTAGACAAGATGAACTATTGGGTTAAGACTGAAACTTTTCATGTCTGATCCAGCATTGATGGTAGAAATGATAGATTGGACAAGTTGCTAATGTTTCTTTGCTTATAGAAATGGTAGATCCAGCATTGGAAGCTAATGTTTCTTTGCTTATATTCATGATGGAATATATCAGAATTGAATATAATAGTCTGCACCTGATCCTATGTTCTTTCTACTGTCTGAATTTGTTCATTTTGTAACCTAAGTTTATGGATGCGGTATGAAGTGTGGAATGTGAATTAGTTGCGTATGGGATTGATGTTTAGAGAGCATGTTGTACTATCTGTACAGGTTTGTTCTTGAAGTTAAAAGTTAAATTTAGAGTTGCAATCATATTGTCATATATTGACCTCAAGGGAAGGTCTTGGCGGTAAGGGCTTGGGATGTTTGAGGAAGTTTCTCAATGAAGGCCTTGGATTCAAGCATCCAAGTGGAAAACCTAATGAACGAAAACCCTTGAAGTCTCCATGAGCTGGTGTTTGGGCGCATGGGATCTCTCTACAGAGTAGTAGAGTGGGACAAAATTCAACAGATATCCCAAAATAAATAAAAACCATAGTTTGTATCGCCTGTTACTGGTTCAATGGATATATCGGAGGGCACCTGTAGCGTGCTCAAGGAACGATGTCTAAGTAGAAGGGTTTCTTTTTTCGGCCCCCAACAAGATTGCAGTTCAAATACAATTATCTTGTTTCAAGGGTTGCTTAGTTTGCACGTGAGAAATGGCTGGAGCATGGAGCGAGTCATTTGTTCGCCAGAATGAGAGTACTTCATTCACTGGCTGATTGTTGGCTGTTGGGAATGGTGCACCAAAATTGGAGTCTCCTGATGGGTTATTGGTTGAGATTAAGGAGCTTTAACATTAAAATCGAGGTTGTACGAAGTTGATCTTCAAGGACAGTTGAGAAAAAGATTTTATTGAGTTTAAAGTTCACATGTTGTCTTGGCGGTTCTTTGTGCGAAAAGACTTCTAATTTATGATGTATCAGGAGAGTTCTTAAAGTTTTCCATTGAAGTGGAGAAAACTACAATCATTAAGTTCTTTGATTATATTCTCAGGGCTCAACATAAATATCCAACCACTTCAAGTTGAAGCAAGTTTCAGGAACTCCAGAACAATCCTGTAGGTTGATATAGTAGGACTTAACTAGATAGAGATTGGAGTCTTCTTGTGCCTGCTGTTATAATCTCCCGAAAAGTTAAAACGATTGTAAAATATACTAAATGTTAAAGGCTTGATTGCAGATGGAGCCTTTGGAATACATTTTAAGTGTTCATACTTTTTCTAGTAAAAGTTGCATCATTAGAGATCCAATCAGAATTGTTTCTTAAATGTTGGTAAATGATTGTAGGATTTTAAAAGATTTAAGTATTCAGATCTGTTAATATGAACTACTGATGCGGTTTTCCATAGGCCTTCAAGTCTAGATCATGCCTTCCTGCTACTCTGGCTTCCCTGAAAAATATCTCCATATTACTTGTCTTGTGGAAACAAAATTGACCTGAGATTATAAATTTTGTTAGTTCAACAACATACGCAGGTTGCAAATTCGAACTTCTAATCTTTTGGTTGAGGACATATGTCTTAACTAATCGAATTATGCTTGATTGTGCTTTTGGAATTACGTTATTATGTTTATAGATGGATTCATTGTTAACATGAGATTACTAGGCCCTTGTTATCTCAGGTCTAAGATTCGAATCTCTTAAACATTATTATGGTTTCTGTAAAACCTTGCATTACTCTTTATTGAGAAGCCAGAAGGGATAACCAGTTTAAATTTCCAGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCTAAAAGGGCATACGAGAAGAAATTGAGAAGACAAAAGGAACAGAGGACCGGGACTCCGATTAAATCACCAAAACCGCTGAGCAGACCAGAGAGTTCACAGAAGCCACAGCAGCTATCAAAGAATGGTGATCTAAAAGCAAAGAAAAAGATCATGAATGATAGCGATGACGACGATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAGGAAAAACGCCGCCTGCCCCTGTCTCTTACTAGCATACTTTTCGAGGAATTACTTGATTAAAATTTGCTTAAGAGTTTAACTGCAAAACTACAGAGATGATTATAACCCAACAGTATTTACCAGGACATTCTTTTATGCTCTACAACCAACCTGTGTAAGGACAATAATTTAAGGAGAGACAAGTTTTATGGTTCAAATCCTTTTCATA

mRNA sequence

CTTGAGTCCTGACAAAAAAAAAAAAGAAGAAAGAAGAAGAAGAAAAAAAAAGGTGATTTTTTGCTCTTCATCTGTTAAATAACCCTCAAATTGCTGTTGAAACGAAAAACAACCAAATTAATTGGCGAAATTTTGATACTTTTTCGCCCACATTTCATTTTATTATCCTATTCTCAAGCAATTAGAATAAATATATCTTCAGCTGGAAAAGGAAAAAAAACGACTGTGAGAAGAAGAAGAACGAAGAAGACGAGAGGAAGAAGATCGTTTCTTCTGATAGAAATAGTCTAAATTAATATGCAAAAACAGAAACCCATTATGGTTTCAGACACCAAACCCACTGTTTCGAAGGTCAAACCAGGTAATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAATAAGAAGAAGATTATCGAAAGTTCCATCAAGAACTCAATTCCCTCTTCCAAACACAAATCCGTCTCCCTTCTCACCAAATCCGAGGTGAAGTCAAAAACAATAACGAGTTCTTCAAAGACAACAACAAAAACTACTACTACAACTACTACTGCTGCTAAAGTGAGAGAGAAGAAAGTGTTCAATTTGACTGGTCAGAAATATGATCCACCTGAAGAGAGAGAGCCGCTTCGGATATTTTATGAGTCCTTGTCGAAACAGATACCAACAAGTGAAATGGCAGAGTTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCTAAAAGGGCATACGAGAAGAAATTGAGAAGACAAAAGGAACAGAGGACCGGGACTCCGATTAAATCACCAAAACCGCTGAGCAGACCAGAGAGTTCACAGAAGCCACAGCAGCTATCAAAGAATGGTGATCTAAAAGCAAAGAAAAAGATCATGAATGATAGCGATGACGACGATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAGGAAAAACGCCGCCTGCCCCTGTCTCTTACTAGCATACTTTTCGAGGAATTACTTGATTAAAATTTGCTTAAGAGTTTAACTGCAAAACTACAGAGATGATTATAACCCAACAGTATTTACCAGGACATTCTTTTATGCTCTACAACCAACCTGTGTAAGGACAATAATTTAAGGAGAGACAAGTTTTATGGTTCAAATCCTTTTCATA

Coding sequence (CDS)

ATGCAAAAACAGAAACCCATTATGGTTTCAGACACCAAACCCACTGTTTCGAAGGTCAAACCAGGTAATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAATAAGAAGAAGATTATCGAAAGTTCCATCAAGAACTCAATTCCCTCTTCCAAACACAAATCCGTCTCCCTTCTCACCAAATCCGAGGTGAAGTCAAAAACAATAACGAGTTCTTCAAAGACAACAACAAAAACTACTACTACAACTACTACTGCTGCTAAAGTGAGAGAGAAGAAAGTGTTCAATTTGACTGGTCAGAAATATGATCCACCTGAAGAGAGAGAGCCGCTTCGGATATTTTATGAGTCCTTGTCGAAACAGATACCAACAAGTGAAATGGCAGAGTTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCTAAAAGGGCATACGAGAAGAAATTGAGAAGACAAAAGGAACAGAGGACCGGGACTCCGATTAAATCACCAAAACCGCTGAGCAGACCAGAGAGTTCACAGAAGCCACAGCAGCTATCAAAGAATGGTGATCTAAAAGCAAAGAAAAAGATCATGAATGATAGCGATGACGACGATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAG

Protein sequence

MQKQKPIMVSDTKPTVSKVKPGNQDGGSRLKLESSDNKKKIIESSIKNSIPSSKHKSVSLLTKSEVKSKTITSSSKTTTKTTTTTTTAAKVREKKVFNLTGQKYDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPIKSPKPLSRPESSQKPQQLSKNGDLKAKKKIMNDSDDDDDFILSPKRRKM
Homology
BLAST of Tan0017807 vs. NCBI nr
Match: XP_004150287.1 (uncharacterized protein LOC101205851 isoform X2 [Cucumis sativus])

HSP 1 Score: 320.9 bits (821), Expect = 8.6e-84
Identity = 186/215 (86.51%), Postives = 199/215 (92.56%), Query Frame = 0

Query: 2   QKQKPIMVSDTKPTVSKVKPGNQDGGSRLKLESSDNKKKIIESSIKNSIPSSKHKSVSLL 61
           +K+K IMVSD K T+SK+KP   DGGSRLKLESSD+KKK I+SSIKNSIPSSKHKSVSL+
Sbjct: 61  EKKKTIMVSDPKSTLSKLKP---DGGSRLKLESSDHKKK-IDSSIKNSIPSSKHKSVSLV 120

Query: 62  TKSEVKSKTITSSSKTTTKTTTTTTTAAKVREKKVFNLTGQKYDPPEEREPLRIFYESLS 121
           TK+EVKSKTI+SSSKTTTKTTTTTT  AKVREKKVFNL GQKYDPPEEREPLRIFYESLS
Sbjct: 121 TKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEEREPLRIFYESLS 180

Query: 122 KQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPIK--SPKPLSRPESSQK 181
           KQIP SEMAEFWMMEHGMLSPEKAK+AYEKKLRRQKEQRTGTPIK  S KPLSRPESSQ+
Sbjct: 181 KQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQR 240

Query: 182 PQQLSKNGDLKAKKKIMNDSDDDDDFILSPKRRKM 215
           PQ  SKNGD+KAKKKI+NDSDDDDDFILSPKRRKM
Sbjct: 241 PQPPSKNGDIKAKKKIVNDSDDDDDFILSPKRRKM 271

BLAST of Tan0017807 vs. NCBI nr
Match: XP_038885128.1 (uncharacterized protein LOC120075630 isoform X1 [Benincasa hispida])

HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83
Identity = 185/207 (89.37%), Postives = 196/207 (94.69%), Query Frame = 0

Query: 8   MVSDTKPTVSKVKPGNQDGGSRLKLESSDNKKKIIESSIKNSIPSSKHKSVSLLTKSEVK 67
           MVSD+KPT+SK+KP   DGGSRLKLESSD+KKK I+SSIKNSI SSKHKS+SL+TKSEVK
Sbjct: 1   MVSDSKPTLSKLKP---DGGSRLKLESSDHKKK-IDSSIKNSISSSKHKSISLVTKSEVK 60

Query: 68  SKTITSSSKTTTKTTTTTTTAAKVREKKVFNLTGQKYDPPEEREPLRIFYESLSKQIPTS 127
           SKTI+SSSKTTTKTTTTTTT AKVREKKVFNL GQKYDPPEEREPLRIFYESLSKQIP S
Sbjct: 61  SKTISSSSKTTTKTTTTTTT-AKVREKKVFNLPGQKYDPPEEREPLRIFYESLSKQIPAS 120

Query: 128 EMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPIKSPKPLSRPESSQKPQQLSKNG 187
           EMAEFWMMEHGMLSPEKAK+AY+KKLRRQKEQRTGTPIKS KP SRPESSQKPQQ SKNG
Sbjct: 121 EMAEFWMMEHGMLSPEKAKKAYDKKLRRQKEQRTGTPIKSAKPPSRPESSQKPQQPSKNG 180

Query: 188 DLKAKKKIMNDSDDDDDFILSPKRRKM 215
           D+KAKKKIMNDSDDDDDFILSPKRRKM
Sbjct: 181 DMKAKKKIMNDSDDDDDFILSPKRRKM 202

BLAST of Tan0017807 vs. NCBI nr
Match: XP_008445018.1 (PREDICTED: uncharacterized protein LOC103488185 isoform X1 [Cucumis melo])

HSP 1 Score: 317.8 bits (813), Expect = 7.3e-83
Identity = 184/209 (88.04%), Postives = 194/209 (92.82%), Query Frame = 0

Query: 8   MVSDTKPTVSKVKPGNQDGGSRLKLESSDNKKKIIESSIKNSIPSSKHKSVSLLTKSEVK 67
           MVSD K T+SK+KP   DGGSRLKLESSD+KKK I+SSIKNSIPSSKHKSVSL+TKSEVK
Sbjct: 1   MVSDPKSTLSKLKP---DGGSRLKLESSDHKKK-IDSSIKNSIPSSKHKSVSLVTKSEVK 60

Query: 68  SKTITSSSKTTTKTTTTTTTAAKVREKKVFNLTGQKYDPPEEREPLRIFYESLSKQIPTS 127
           SKTI+SSSKTTTKTTTTTT  AKVREKK+FNL GQKYDPPEEREPLRIFYESLSKQIP S
Sbjct: 61  SKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPAS 120

Query: 128 EMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPIK--SPKPLSRPESSQKPQQLSK 187
           EMAEFWMMEHGMLSPEKAK+AYEKKLRRQKEQRTGTPIK  S KPLSRPESSQ+PQ  SK
Sbjct: 121 EMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSK 180

Query: 188 NGDLKAKKKIMNDSDDDDDFILSPKRRKM 215
           NGD+KAKKKIMNDSDDDDDFILSPKRRKM
Sbjct: 181 NGDIKAKKKIMNDSDDDDDFILSPKRRKM 205

BLAST of Tan0017807 vs. NCBI nr
Match: KGN62818.1 (hypothetical protein Csa_022087 [Cucumis sativus])

HSP 1 Score: 315.5 bits (807), Expect = 3.6e-82
Identity = 183/209 (87.56%), Postives = 194/209 (92.82%), Query Frame = 0

Query: 8   MVSDTKPTVSKVKPGNQDGGSRLKLESSDNKKKIIESSIKNSIPSSKHKSVSLLTKSEVK 67
           MVSD K T+SK+KP   DGGSRLKLESSD+KKK I+SSIKNSIPSSKHKSVSL+TK+EVK
Sbjct: 1   MVSDPKSTLSKLKP---DGGSRLKLESSDHKKK-IDSSIKNSIPSSKHKSVSLVTKAEVK 60

Query: 68  SKTITSSSKTTTKTTTTTTTAAKVREKKVFNLTGQKYDPPEEREPLRIFYESLSKQIPTS 127
           SKTI+SSSKTTTKTTTTTT  AKVREKKVFNL GQKYDPPEEREPLRIFYESLSKQIP S
Sbjct: 61  SKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEEREPLRIFYESLSKQIPAS 120

Query: 128 EMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPIK--SPKPLSRPESSQKPQQLSK 187
           EMAEFWMMEHGMLSPEKAK+AYEKKLRRQKEQRTGTPIK  S KPLSRPESSQ+PQ  SK
Sbjct: 121 EMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSK 180

Query: 188 NGDLKAKKKIMNDSDDDDDFILSPKRRKM 215
           NGD+KAKKKI+NDSDDDDDFILSPKRRKM
Sbjct: 181 NGDIKAKKKIVNDSDDDDDFILSPKRRKM 205

BLAST of Tan0017807 vs. NCBI nr
Match: XP_031736856.1 (uncharacterized protein LOC101205851 isoform X1 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 2.3e-81
Identity = 186/225 (82.67%), Postives = 199/225 (88.44%), Query Frame = 0

Query: 2   QKQKPIMVSDTKPTVSKVKPGNQDGGSRLKLESSDNKKKIIESSIKNSIPSSKHKSVSLL 61
           +K+K IMVSD K T+SK+KP   DGGSRLKLESSD+KKK I+SSIKNSIPSSKHKSVSL+
Sbjct: 61  EKKKTIMVSDPKSTLSKLKP---DGGSRLKLESSDHKKK-IDSSIKNSIPSSKHKSVSLV 120

Query: 62  TKSEVKSKTITSSSKTTTKTTTTTTTAAKVREKKVFNLTGQKYDPPEEREPLRIFYESLS 121
           TK+EVKSKTI+SSSKTTTKTTTTTT  AKVREKKVFNL GQKYDPPEEREPLRIFYESLS
Sbjct: 121 TKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEEREPLRIFYESLS 180

Query: 122 KQIPTSEMAEF----------WMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPIK--SPK 181
           KQIP SEMAEF          WMMEHGMLSPEKAK+AYEKKLRRQKEQRTGTPIK  S K
Sbjct: 181 KQIPASEMAEFWPTRLDRAFQWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAK 240

Query: 182 PLSRPESSQKPQQLSKNGDLKAKKKIMNDSDDDDDFILSPKRRKM 215
           PLSRPESSQ+PQ  SKNGD+KAKKKI+NDSDDDDDFILSPKRRKM
Sbjct: 241 PLSRPESSQRPQPPSKNGDIKAKKKIVNDSDDDDDFILSPKRRKM 281

BLAST of Tan0017807 vs. ExPASy TrEMBL
Match: A0A1S3BCG5 (uncharacterized protein LOC103488185 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488185 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.5e-83
Identity = 184/209 (88.04%), Postives = 194/209 (92.82%), Query Frame = 0

Query: 8   MVSDTKPTVSKVKPGNQDGGSRLKLESSDNKKKIIESSIKNSIPSSKHKSVSLLTKSEVK 67
           MVSD K T+SK+KP   DGGSRLKLESSD+KKK I+SSIKNSIPSSKHKSVSL+TKSEVK
Sbjct: 1   MVSDPKSTLSKLKP---DGGSRLKLESSDHKKK-IDSSIKNSIPSSKHKSVSLVTKSEVK 60

Query: 68  SKTITSSSKTTTKTTTTTTTAAKVREKKVFNLTGQKYDPPEEREPLRIFYESLSKQIPTS 127
           SKTI+SSSKTTTKTTTTTT  AKVREKK+FNL GQKYDPPEEREPLRIFYESLSKQIP S
Sbjct: 61  SKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPAS 120

Query: 128 EMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPIK--SPKPLSRPESSQKPQQLSK 187
           EMAEFWMMEHGMLSPEKAK+AYEKKLRRQKEQRTGTPIK  S KPLSRPESSQ+PQ  SK
Sbjct: 121 EMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSK 180

Query: 188 NGDLKAKKKIMNDSDDDDDFILSPKRRKM 215
           NGD+KAKKKIMNDSDDDDDFILSPKRRKM
Sbjct: 181 NGDIKAKKKIMNDSDDDDDFILSPKRRKM 205

BLAST of Tan0017807 vs. ExPASy TrEMBL
Match: A0A0A0LLY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374600 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.7e-82
Identity = 183/209 (87.56%), Postives = 194/209 (92.82%), Query Frame = 0

Query: 8   MVSDTKPTVSKVKPGNQDGGSRLKLESSDNKKKIIESSIKNSIPSSKHKSVSLLTKSEVK 67
           MVSD K T+SK+KP   DGGSRLKLESSD+KKK I+SSIKNSIPSSKHKSVSL+TK+EVK
Sbjct: 1   MVSDPKSTLSKLKP---DGGSRLKLESSDHKKK-IDSSIKNSIPSSKHKSVSLVTKAEVK 60

Query: 68  SKTITSSSKTTTKTTTTTTTAAKVREKKVFNLTGQKYDPPEEREPLRIFYESLSKQIPTS 127
           SKTI+SSSKTTTKTTTTTT  AKVREKKVFNL GQKYDPPEEREPLRIFYESLSKQIP S
Sbjct: 61  SKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEEREPLRIFYESLSKQIPAS 120

Query: 128 EMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPIK--SPKPLSRPESSQKPQQLSK 187
           EMAEFWMMEHGMLSPEKAK+AYEKKLRRQKEQRTGTPIK  S KPLSRPESSQ+PQ  SK
Sbjct: 121 EMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSK 180

Query: 188 NGDLKAKKKIMNDSDDDDDFILSPKRRKM 215
           NGD+KAKKKI+NDSDDDDDFILSPKRRKM
Sbjct: 181 NGDIKAKKKIVNDSDDDDDFILSPKRRKM 205

BLAST of Tan0017807 vs. ExPASy TrEMBL
Match: A0A6J1BR23 (uncharacterized protein LOC111004987 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004987 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.4e-79
Identity = 176/207 (85.02%), Postives = 188/207 (90.82%), Query Frame = 0

Query: 8   MVSDTKPTVSKVKPGNQDGGSRLKLESSDNKKKIIESSIKNSIPSSKHKSVSLLTKSEVK 67
           MV++TKPTVSK+KPGNQDGGSRLKLESSDNK+K IESS K+SI  SK KS S+L KSEVK
Sbjct: 1   MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRK-IESSTKSSI-GSKPKSASVLIKSEVK 60

Query: 68  SKTITSSSKTTTKTTTTTTTAAKVREKKVFNLTGQKYDPPEEREPLRIFYESLSKQIPTS 127
           SK  +SSSKTT+KTTTTTTT  KVREKKV+NL GQKYDPPEEREPLRIFYESLSKQIPTS
Sbjct: 61  SKITSSSSKTTSKTTTTTTTTTKVREKKVYNLAGQKYDPPEEREPLRIFYESLSKQIPTS 120

Query: 128 EMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPIKSPKPLSRPESSQKPQQLSKNG 187
           EMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTP+KSPK  S+PESSQK Q  SKNG
Sbjct: 121 EMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNG 180

Query: 188 DLKAKKKIMNDSDDDDDFILSPKRRKM 215
           DLKAKKKI NDS +DDDFILSPKRRKM
Sbjct: 181 DLKAKKKITNDSSEDDDFILSPKRRKM 205

BLAST of Tan0017807 vs. ExPASy TrEMBL
Match: A0A6J1GJC9 (uncharacterized protein LOC111454380 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454380 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.2e-77
Identity = 177/208 (85.10%), Postives = 185/208 (88.94%), Query Frame = 0

Query: 8   MVSDTKPTVSKVKPGNQDGGSRLKLESSDNKKKIIESSIKNSIPSSKHKSVSLLTKSEVK 67
           MVSD KPTVSKVK G+QDGGSRLKLESSDNKK        +S+ SSKHKSVS+L KSEVK
Sbjct: 1   MVSDPKPTVSKVKLGHQDGGSRLKLESSDNKKN------NSSVSSSKHKSVSVLPKSEVK 60

Query: 68  SKTITSSSKTTTKTTTTTTTAAKVREKKVFNLTGQKYDPPEEREPLRIFYESLSKQIPTS 127
           SKTITSSSKTTTK TT+T   AKVREKKVFNL GQKYDPPEEREPLRIFYESLSKQI TS
Sbjct: 61  SKTITSSSKTTTKATTST---AKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTS 120

Query: 128 EMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPIKSPKPLSRPESSQKPQQLSKNG 187
           EMAEFWMMEHGMLSPEKAK+AYEKKLRRQKEQRTGTPIKS KP SRPESSQ+PQQ SKNG
Sbjct: 121 EMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNG 180

Query: 188 DLKAKKKIMNDSDDDD-DFILSPKRRKM 215
           DLKAKKKI N+SDDDD DFILSPKRRKM
Sbjct: 181 DLKAKKKITNNSDDDDNDFILSPKRRKM 199

BLAST of Tan0017807 vs. ExPASy TrEMBL
Match: A0A6J1BSP0 (uncharacterized protein LOC111004987 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111004987 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.8e-77
Identity = 174/207 (84.06%), Postives = 186/207 (89.86%), Query Frame = 0

Query: 8   MVSDTKPTVSKVKPGNQDGGSRLKLESSDNKKKIIESSIKNSIPSSKHKSVSLLTKSEVK 67
           MV++TKPTVSK+KPGNQDGGSRLKLESSDNK+K IESS K+SI  SK KS S+L KSE  
Sbjct: 1   MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRK-IESSTKSSI-GSKPKSASVLIKSE-- 60

Query: 68  SKTITSSSKTTTKTTTTTTTAAKVREKKVFNLTGQKYDPPEEREPLRIFYESLSKQIPTS 127
           SK  +SSSKTT+KTTTTTTT  KVREKKV+NL GQKYDPPEEREPLRIFYESLSKQIPTS
Sbjct: 61  SKITSSSSKTTSKTTTTTTTTTKVREKKVYNLAGQKYDPPEEREPLRIFYESLSKQIPTS 120

Query: 128 EMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPIKSPKPLSRPESSQKPQQLSKNG 187
           EMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTP+KSPK  S+PESSQK Q  SKNG
Sbjct: 121 EMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNG 180

Query: 188 DLKAKKKIMNDSDDDDDFILSPKRRKM 215
           DLKAKKKI NDS +DDDFILSPKRRKM
Sbjct: 181 DLKAKKKITNDSSEDDDFILSPKRRKM 203

BLAST of Tan0017807 vs. TAIR 10
Match: AT5G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 154.5 bits (389), Expect = 9.9e-38
Identity = 123/242 (50.83%), Postives = 151/242 (62.40%), Query Frame = 0

Query: 8   MVSDTKPTVSKVKPGNQDG--GSRLKLESS-DNKKKIIESSIKNSIPSSKHKSVSLLT-K 67
           M +  +P+ +K +P +      SR+K++ S  +KKKI  SS      S    SVS +T K
Sbjct: 1   MATQERPSSAKSEPRDASSSLSSRVKIDPSIKDKKKIATSSRPIMSDSKPRSSVSTVTAK 60

Query: 68  SEVKSKTITSSSKTTTKT------------TTTT--------TTAAKV--------REKK 127
           SE K K   +S KT   T            TT+T        TT+A V        REKK
Sbjct: 61  SEAKPKVPINSVKTIATTSAAASLVKGKAQTTSTVVSLVKAKTTSATVSLVKGKAKREKK 120

Query: 128 VFNLTGQKYDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRR 187
           V++L GQK+DPPEEREPLRIFYESLSKQIP SEMAEFW+MEHGMLSPEKAKRA+EKK R+
Sbjct: 121 VYSLAGQKFDPPEEREPLRIFYESLSKQIPGSEMAEFWLMEHGMLSPEKAKRAFEKKQRK 180

Query: 188 QKEQRTGTPIKS-PKPLSRPESSQKPQQLSKNG-DLKAKKKIM-NDSDDDDDFILSPKRR 215
            K+ R GTP KS P   S+ ESSQ+      NG D + KKK++ +D DDDDDFILS KRR
Sbjct: 181 MKQIRMGTPSKSAPTFSSKAESSQRTSASKNNGLDARKKKKVVDDDDDDDDDFILSHKRR 240

BLAST of Tan0017807 vs. TAIR 10
Match: AT1G19990.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11600.1); Has 11256 Blast hits to 7192 proteins in 541 species: Archae - 6; Bacteria - 629; Metazoa - 4714; Fungi - 936; Plants - 545; Viruses - 34; Other Eukaryotes - 4392 (source: NCBI BLink). )

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-17
Identity = 83/223 (37.22%), Postives = 113/223 (50.67%), Query Frame = 0

Query: 17  SKVKP--GNQDGGSRLKLESS---DNKKKIIESSIKNSIPSSKHKSVSLLTKSEVKSKTI 76
           +K KP  GN  G  +LK E +   D+  K I+SS+  S      K   +    E K  + 
Sbjct: 27  AKKKPTNGNNAGSKKLKKEENDDDDDDNKPIKSSVSGSRAKPVKKKEEIDKDDEKKPVSK 86

Query: 77  TSSSKTTTKTTTTTTTAAKV---REKKVFNLTGQKYDPPEEREPLRIFYESLSKQIPTSE 136
            +SS   +K         +V   RE+KV++L GQK + P+ER+PLRIFYESL KQIPTS+
Sbjct: 87  RNSSVGVSKENKKPEKEEEVKKKRERKVYDLPGQKREQPDERDPLRIFYESLYKQIPTSD 146

Query: 137 MAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPIKSPKPLSRPES------------ 196
           MA+ W+ME G+L  EKAK+  EKKL  QK  +  +P+KS     R  S            
Sbjct: 147 MAQIWLMESGLLPAEKAKKVLEKKL--QKGGKLSSPVKSAASTPRSNSKSVTVKKKEVQK 206

Query: 197 ------SQKPQQLSKNGDLKAKKKIMNDSDDDDDFILSPKRRK 214
                 S K +        K +KK  +D D DDDF+ S   +K
Sbjct: 207 SPSEALSNKKKGNDSKPTTKKRKKNSDDDDSDDDFLASRVSKK 247

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_004150287.18.6e-8486.51uncharacterized protein LOC101205851 isoform X2 [Cucumis sativus][more]
XP_038885128.11.1e-8389.37uncharacterized protein LOC120075630 isoform X1 [Benincasa hispida][more]
XP_008445018.17.3e-8388.04PREDICTED: uncharacterized protein LOC103488185 isoform X1 [Cucumis melo][more]
KGN62818.13.6e-8287.56hypothetical protein Csa_022087 [Cucumis sativus][more]
XP_031736856.12.3e-8182.67uncharacterized protein LOC101205851 isoform X1 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A1S3BCG53.5e-8388.04uncharacterized protein LOC103488185 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0LLY41.7e-8287.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374600 PE=4 SV=1[more]
A0A6J1BR231.4e-7985.02uncharacterized protein LOC111004987 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1GJC92.2e-7785.10uncharacterized protein LOC111454380 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1BSP03.8e-7784.06uncharacterized protein LOC111004987 isoform X2 OS=Momordica charantia OX=3673 G... [more]
Match NameE-valueIdentityDescription
AT5G11600.19.9e-3850.83unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G19990.11.1e-1737.22unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR33828:SF1OS05G0596200 PROTEINcoord: 13..213
NoneNo IPR availablePANTHERPTHR33828OS05G0596200 PROTEINcoord: 13..213

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0017807.1Tan0017807.1mRNA