Tan0017807 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTGAGTCCTGACAAAAAAAAAAAAGAAGAAAGAAGAAGAAGAAAAAAAAAGGTGATTTTTTGCTCTTCATCTGTTAAATAACCCTCAAATTGCTGTTGAAACGAAAAACAACCAAATTAATTGGCGAAATTTTGATACTTTTTCGCCCACATTTCATTTTATTATCCTATTCTCAAGCAATTAGAATAAATATATCTTCAGCTGGAAAAGGAAAAAAAACGACTGTGAGAAGAAGAAGAACGAAGAAGACGAGAGGAAGAAGATCGTTTCTTCTGATAGAAATAGTCTAAATTAATATGCAAAAACAGAAACCCATTATGGTTTCAGACACCAAACCCACTGTTTCGAAGGTCAAACCAGGTAATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAATAAGAAGAAGATTATCGAAAGTTCCATCAAGAACTCAATTCCCTCTTCCAAACACAAATCCGTCTCCCTTCTCACCAAATCCGAGGTACTCATTTTGGAAATTTCAGGTTTATTGCTTTATTCAGATTTAGCTGTCACGAATTGGGGATTTTATGTTTTTTAACTGTTTTTTCTCCTCTGTCTGAATTGTTTTGTGCTTTGAAACGCATCTAATTTCTCAATTGGTAACCGTAACGGATTTGGGGTTATTCAAATTTGGAGTTTGTGGGGTTTCTAATTCGTAATTAATTGCGGGTTTTCTGAAATTTGGATTGTCCCAATTGGGCTGTTGTTCCTTTGCTTTCTCTAAAATCATTTGGGTTTAGATTCTGAATGGTTTCGTTGGTTTTCTTTTTGGAAGGTGAAGTCAAAAACAATAACGAGTTCTTCAAAGACAACAACAAAAACTACTACTACAACTACTACTGCTGCTAAAGTGAGAGAGAAGAAAGTGTTCAATTTGACTGGTCAGAAATATGATCCACCTGAAGAGGTTTGTGCTTTCTTCCTTCATAGTTTGGTTTTAGTTTATGTGATTGATGGACTCATCATTCTTGCTGTTTTGTGCACAGAGAGAGCCGCTTCGGATATTTTATGAGTCCTTGTCGAAACAGATACCAACAAGTGAAATGGCAGAGTTTTGGTGCGGTTTGTTTTCTGATATTCTTTTGAGCATTCTCTGTCTGTTTAATCCTTTGAGTAATTCGTAAACTGTGCGTATAGAATTGGGGCAGCCTTGGAATTATGTTGTTCTTTTATTTCGTTTCGTGCACGATCCTTAGGCTGATGATAATCTGTGATACTCTCTGATATGATGCTTCATCAATCATGATGTTCTGAGTGCTTCTTTCAATGGCAGTTGGTTTCGTTTAGTTAGACGAAAAAGCTACTGGTACTAGTGAAGTCATGTTTATCTACTACTACTGTAGTTGCTAAATTTGAATTATAGAGACAACTGGTATAATTCTTTTAGATTGTAGTCCGTTCTTCTAGTTGGTTGAAGATTCCTTTGTGGACTTGTTTTTTGTATTCCCTTGTAAATTCTTTCATTTTTCTCAATTAAAGCTCAATTTTTTAACAAAAAAGTTATAGAGGGACTAAATGCAACTGAAGTCATACATGAGAGACTGCATTTTAGGGGCAGGTAACTTCTGTCAAACAACTTTCCAACTAAGTGGTTTCTTTGTGTGAGGGTTATTCCAATTTTTTTTGTGACACTTGCTCAATATTTTTGTTACTTAGACAAGATGAACTATTGGGTTAAGACTGAAACTTTTCATGTCTGATCCAGCATTGATGGTAGAAATGATAGATTGGACAAGTTGCTAATGTTTCTTTGCTTATAGAAATGGTAGATCCAGCATTGGAAGCTAATGTTTCTTTGCTTATATTCATGATGGAATATATCAGAATTGAATATAATAGTCTGCACCTGATCCTATGTTCTTTCTACTGTCTGAATTTGTTCATTTTGTAACCTAAGTTTATGGATGCGGTATGAAGTGTGGAATGTGAATTAGTTGCGTATGGGATTGATGTTTAGAGAGCATGTTGTACTATCTGTACAGGTTTGTTCTTGAAGTTAAAAGTTAAATTTAGAGTTGCAATCATATTGTCATATATTGACCTCAAGGGAAGGTCTTGGCGGTAAGGGCTTGGGATGTTTGAGGAAGTTTCTCAATGAAGGCCTTGGATTCAAGCATCCAAGTGGAAAACCTAATGAACGAAAACCCTTGAAGTCTCCATGAGCTGGTGTTTGGGCGCATGGGATCTCTCTACAGAGTAGTAGAGTGGGACAAAATTCAACAGATATCCCAAAATAAATAAAAACCATAGTTTGTATCGCCTGTTACTGGTTCAATGGATATATCGGAGGGCACCTGTAGCGTGCTCAAGGAACGATGTCTAAGTAGAAGGGTTTCTTTTTTCGGCCCCCAACAAGATTGCAGTTCAAATACAATTATCTTGTTTCAAGGGTTGCTTAGTTTGCACGTGAGAAATGGCTGGAGCATGGAGCGAGTCATTTGTTCGCCAGAATGAGAGTACTTCATTCACTGGCTGATTGTTGGCTGTTGGGAATGGTGCACCAAAATTGGAGTCTCCTGATGGGTTATTGGTTGAGATTAAGGAGCTTTAACATTAAAATCGAGGTTGTACGAAGTTGATCTTCAAGGACAGTTGAGAAAAAGATTTTATTGAGTTTAAAGTTCACATGTTGTCTTGGCGGTTCTTTGTGCGAAAAGACTTCTAATTTATGATGTATCAGGAGAGTTCTTAAAGTTTTCCATTGAAGTGGAGAAAACTACAATCATTAAGTTCTTTGATTATATTCTCAGGGCTCAACATAAATATCCAACCACTTCAAGTTGAAGCAAGTTTCAGGAACTCCAGAACAATCCTGTAGGTTGATATAGTAGGACTTAACTAGATAGAGATTGGAGTCTTCTTGTGCCTGCTGTTATAATCTCCCGAAAAGTTAAAACGATTGTAAAATATACTAAATGTTAAAGGCTTGATTGCAGATGGAGCCTTTGGAATACATTTTAAGTGTTCATACTTTTTCTAGTAAAAGTTGCATCATTAGAGATCCAATCAGAATTGTTTCTTAAATGTTGGTAAATGATTGTAGGATTTTAAAAGATTTAAGTATTCAGATCTGTTAATATGAACTACTGATGCGGTTTTCCATAGGCCTTCAAGTCTAGATCATGCCTTCCTGCTACTCTGGCTTCCCTGAAAAATATCTCCATATTACTTGTCTTGTGGAAACAAAATTGACCTGAGATTATAAATTTTGTTAGTTCAACAACATACGCAGGTTGCAAATTCGAACTTCTAATCTTTTGGTTGAGGACATATGTCTTAACTAATCGAATTATGCTTGATTGTGCTTTTGGAATTACGTTATTATGTTTATAGATGGATTCATTGTTAACATGAGATTACTAGGCCCTTGTTATCTCAGGTCTAAGATTCGAATCTCTTAAACATTATTATGGTTTCTGTAAAACCTTGCATTACTCTTTATTGAGAAGCCAGAAGGGATAACCAGTTTAAATTTCCAGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCTAAAAGGGCATACGAGAAGAAATTGAGAAGACAAAAGGAACAGAGGACCGGGACTCCGATTAAATCACCAAAACCGCTGAGCAGACCAGAGAGTTCACAGAAGCCACAGCAGCTATCAAAGAATGGTGATCTAAAAGCAAAGAAAAAGATCATGAATGATAGCGATGACGACGATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAGGAAAAACGCCGCCTGCCCCTGTCTCTTACTAGCATACTTTTCGAGGAATTACTTGATTAAAATTTGCTTAAGAGTTTAACTGCAAAACTACAGAGATGATTATAACCCAACAGTATTTACCAGGACATTCTTTTATGCTCTACAACCAACCTGTGTAAGGACAATAATTTAAGGAGAGACAAGTTTTATGGTTCAAATCCTTTTCATA CTTGAGTCCTGACAAAAAAAAAAAAGAAGAAAGAAGAAGAAGAAAAAAAAAGGTGATTTTTTGCTCTTCATCTGTTAAATAACCCTCAAATTGCTGTTGAAACGAAAAACAACCAAATTAATTGGCGAAATTTTGATACTTTTTCGCCCACATTTCATTTTATTATCCTATTCTCAAGCAATTAGAATAAATATATCTTCAGCTGGAAAAGGAAAAAAAACGACTGTGAGAAGAAGAAGAACGAAGAAGACGAGAGGAAGAAGATCGTTTCTTCTGATAGAAATAGTCTAAATTAATATGCAAAAACAGAAACCCATTATGGTTTCAGACACCAAACCCACTGTTTCGAAGGTCAAACCAGGTAATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAATAAGAAGAAGATTATCGAAAGTTCCATCAAGAACTCAATTCCCTCTTCCAAACACAAATCCGTCTCCCTTCTCACCAAATCCGAGGTGAAGTCAAAAACAATAACGAGTTCTTCAAAGACAACAACAAAAACTACTACTACAACTACTACTGCTGCTAAAGTGAGAGAGAAGAAAGTGTTCAATTTGACTGGTCAGAAATATGATCCACCTGAAGAGAGAGAGCCGCTTCGGATATTTTATGAGTCCTTGTCGAAACAGATACCAACAAGTGAAATGGCAGAGTTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCTAAAAGGGCATACGAGAAGAAATTGAGAAGACAAAAGGAACAGAGGACCGGGACTCCGATTAAATCACCAAAACCGCTGAGCAGACCAGAGAGTTCACAGAAGCCACAGCAGCTATCAAAGAATGGTGATCTAAAAGCAAAGAAAAAGATCATGAATGATAGCGATGACGACGATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAGGAAAAACGCCGCCTGCCCCTGTCTCTTACTAGCATACTTTTCGAGGAATTACTTGATTAAAATTTGCTTAAGAGTTTAACTGCAAAACTACAGAGATGATTATAACCCAACAGTATTTACCAGGACATTCTTTTATGCTCTACAACCAACCTGTGTAAGGACAATAATTTAAGGAGAGACAAGTTTTATGGTTCAAATCCTTTTCATA ATGCAAAAACAGAAACCCATTATGGTTTCAGACACCAAACCCACTGTTTCGAAGGTCAAACCAGGTAATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAATAAGAAGAAGATTATCGAAAGTTCCATCAAGAACTCAATTCCCTCTTCCAAACACAAATCCGTCTCCCTTCTCACCAAATCCGAGGTGAAGTCAAAAACAATAACGAGTTCTTCAAAGACAACAACAAAAACTACTACTACAACTACTACTGCTGCTAAAGTGAGAGAGAAGAAAGTGTTCAATTTGACTGGTCAGAAATATGATCCACCTGAAGAGAGAGAGCCGCTTCGGATATTTTATGAGTCCTTGTCGAAACAGATACCAACAAGTGAAATGGCAGAGTTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCTAAAAGGGCATACGAGAAGAAATTGAGAAGACAAAAGGAACAGAGGACCGGGACTCCGATTAAATCACCAAAACCGCTGAGCAGACCAGAGAGTTCACAGAAGCCACAGCAGCTATCAAAGAATGGTGATCTAAAAGCAAAGAAAAAGATCATGAATGATAGCGATGACGACGATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAG MQKQKPIMVSDTKPTVSKVKPGNQDGGSRLKLESSDNKKKIIESSIKNSIPSSKHKSVSLLTKSEVKSKTITSSSKTTTKTTTTTTTAAKVREKKVFNLTGQKYDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPIKSPKPLSRPESSQKPQQLSKNGDLKAKKKIMNDSDDDDDFILSPKRRKM Homology
BLAST of Tan0017807 vs. NCBI nr
Match: XP_004150287.1 (uncharacterized protein LOC101205851 isoform X2 [Cucumis sativus]) HSP 1 Score: 320.9 bits (821), Expect = 8.6e-84 Identity = 186/215 (86.51%), Postives = 199/215 (92.56%), Query Frame = 0
BLAST of Tan0017807 vs. NCBI nr
Match: XP_038885128.1 (uncharacterized protein LOC120075630 isoform X1 [Benincasa hispida]) HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83 Identity = 185/207 (89.37%), Postives = 196/207 (94.69%), Query Frame = 0
BLAST of Tan0017807 vs. NCBI nr
Match: XP_008445018.1 (PREDICTED: uncharacterized protein LOC103488185 isoform X1 [Cucumis melo]) HSP 1 Score: 317.8 bits (813), Expect = 7.3e-83 Identity = 184/209 (88.04%), Postives = 194/209 (92.82%), Query Frame = 0
BLAST of Tan0017807 vs. NCBI nr
Match: KGN62818.1 (hypothetical protein Csa_022087 [Cucumis sativus]) HSP 1 Score: 315.5 bits (807), Expect = 3.6e-82 Identity = 183/209 (87.56%), Postives = 194/209 (92.82%), Query Frame = 0
BLAST of Tan0017807 vs. NCBI nr
Match: XP_031736856.1 (uncharacterized protein LOC101205851 isoform X1 [Cucumis sativus]) HSP 1 Score: 312.8 bits (800), Expect = 2.3e-81 Identity = 186/225 (82.67%), Postives = 199/225 (88.44%), Query Frame = 0
BLAST of Tan0017807 vs. ExPASy TrEMBL
Match: A0A1S3BCG5 (uncharacterized protein LOC103488185 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488185 PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 3.5e-83 Identity = 184/209 (88.04%), Postives = 194/209 (92.82%), Query Frame = 0
BLAST of Tan0017807 vs. ExPASy TrEMBL
Match: A0A0A0LLY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374600 PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 1.7e-82 Identity = 183/209 (87.56%), Postives = 194/209 (92.82%), Query Frame = 0
BLAST of Tan0017807 vs. ExPASy TrEMBL
Match: A0A6J1BR23 (uncharacterized protein LOC111004987 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004987 PE=4 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 1.4e-79 Identity = 176/207 (85.02%), Postives = 188/207 (90.82%), Query Frame = 0
BLAST of Tan0017807 vs. ExPASy TrEMBL
Match: A0A6J1GJC9 (uncharacterized protein LOC111454380 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454380 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 2.2e-77 Identity = 177/208 (85.10%), Postives = 185/208 (88.94%), Query Frame = 0
BLAST of Tan0017807 vs. ExPASy TrEMBL
Match: A0A6J1BSP0 (uncharacterized protein LOC111004987 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111004987 PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 3.8e-77 Identity = 174/207 (84.06%), Postives = 186/207 (89.86%), Query Frame = 0
BLAST of Tan0017807 vs. TAIR 10
Match: AT5G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 154.5 bits (389), Expect = 9.9e-38 Identity = 123/242 (50.83%), Postives = 151/242 (62.40%), Query Frame = 0
BLAST of Tan0017807 vs. TAIR 10
Match: AT1G19990.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11600.1); Has 11256 Blast hits to 7192 proteins in 541 species: Archae - 6; Bacteria - 629; Metazoa - 4714; Fungi - 936; Plants - 545; Viruses - 34; Other Eukaryotes - 4392 (source: NCBI BLink). ) HSP 1 Score: 87.8 bits (216), Expect = 1.1e-17 Identity = 83/223 (37.22%), Postives = 113/223 (50.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|