Tan0017781 (gene) Snake gourd v1

Overview


Name	Tan0017781
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	WD40 repeat-containing protein HOS15
Location	LG11: 2395107 .. 2397926 (-)
RNA-Seq Expression	Tan0017781
Synteny	Tan0017781

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCTGTGGTTACGTTGATATTGTTTGTTGTTAGATAATTTTTTTTTTCAGTTACTTCCAAATGCATATGCCAAGAAATTTCATGATCGAAAGAAAACTTTTTTCCCTAAATTGTTTTTTACTTTCTTTTTGGCTTTTTAAGAGGAATGTAATTGATAGGAAGATCAATGTAAGACTTTTGATTTTTATATAATGATTTTAGGACAAAACTATATGAAATATATTACTTTGAGATGATCCATCTATTTTCCAAATTTGCAGCAGTAAGGTGAGGTTGCTTCTGTTCCAAAGCATATAATCCATTTTGCTTAGTTCCCATTGCCAATGTTTCTCCCTGCTTAGTCTTTACAACAAATTCATTAGCATGAAAGGTTATAAGGCAATCATTGTCGTTTGTCAATTTACTAACTGAGAGTAAGTTCTTTTTAATGTTTGGTACTATCAAAACATCCTTTAATTTTAACATGTCATATAGCTAGACCTTCACCATTACCTACAAATAGCTTATCTTTTCCTTTATAAGGATGTAGGTATGAGATTGTACCTGTATCATTCCTTACATGTGAAGTTGTACATGTATCATAACTTATCTTTTCCTTGATTTCTTCATTTAATGTCATAGCTGATAGGGTCGTAGGAACTTCATCACTCTGATATGAATGATCAAACCTATTCCAACACTTGAAGGTTGTATGGTTAGCTTTTCCACAAATTTGACAAGTTATTTGATTACCTTGACTTGAAACTGGATTTGATTTTTGTTATGGTAAGTTGGAGACAATAAACTTGTTGTAAGGCGTAGGTTAATTAAGGTGACTTGTTGCTTCTTGTGGGTTGGAAACCTCTACCATGTGAGTTGAATGACCGGTTTGGTCCTCTCCCTCTGTGGCTATAGAAAGCAGGGTTAACATCGGGTGGTTTTAGTTTAGGAACTCTTTAAGTTTCTTTAAGCGTGAAAATGAGACTTAAACTCTGAAAATGAGACTTAAACTCTTTCTAGGTCGTCTTGAGTTATTTTTAGCCTCAAAGTATGCTTAAGCTCCTTTAATGAAGCTTCATTCTTTGGTATACTAACAACCAGTTTAATCAAACTCAAAAGTTCACTTGTTAGACACTTTTATTCAACCAAGATGCAAGAGCTTACCGTTTGAGCCAAGAATTACAGCATCCTTATGAACTTGTCACTTGTCAGCAAAAGAGTTGAGATAGAAAATAGCATTTTGGAATGCTTTTGTGTGGTCGTATTTCTCTTGTAGTAGTCAACTTGGTTAGTTTTGGTTGAATCCATTTCTTATTGTTTGTTCTGATTTGCTTATTTGAATCATGGAAGTAGTTGAAGTATTGAGAATAATTATGTTTGCATCTGGTCTTAAACTGAAGTAGTTGAAGTATAGATTAAAAAGCGTTTAGCTTTTGTAGTTATGAGATTTTTCTCTTAAGTTTGTACATGACATGTTCTTATGGGGGGTGTTACCTATGTAGTTGCAAATTTTGACTTGGAGATTAGATTTTGAAGGTGTTGAATTTGATTAGATAACTTTCTACTTATACTTATGATCGAGATAACTTCAAAGAAAAAGGTAGTATCAGTATTGAGTTGAATAAAAGTCCAATAGTCTTGGTAGTTGGTACTGGCCAAAGGACCCATATTTTCTCTGAAGTGGAACAAGAAAGGTGATTATCTTCTCACTGGAAGCTGTGACAAAACTGCTATTGTTTGGGATGTGAAAGCAAAGGGAAGCAACAGTTTGAATTTCATACAGGTTGTATACAATATATTGAATGTTCTTGAAGGAAAAAGGATGTTTGCAAAAAGTTTGCAATAATGATGCTATTTTTACGTTTAGGTCCAACACTTGATGTTGATTGGCGCAACAATGTATCATTTGCAACAAGTTCCACAGATAACATGATATTTGTCTGCAAAATTGGAGAGACTCATCCTATTAAAACTTTTGCAGGACATCAGGTTCCTTTTTTCCCTCTTCCCTGTTTTGAATCTGATTGACTTTGATCTAAATTCATTATTGAGGTCAGTGTTATTTTCTAATTTTGTTTCAAGTTTTGGAAGTATGCAAGTTGTATGTTCTTTGAGGGAAGACTAGATTTTCTCGTTCTAGCTAATTATTGTTTTGCAACTTTGCAGGGTGAAGTGAATTGTGTCAAGTGGAATCCCACAGGATCATTGTTGGCTTCGTGTTCTGATGATATCACAACTAAGGTTATATATATTGTCCAATGTTGTGGCTCATTTGCAACTAATTTCTGAGTTGAATTTGATTTTGTCTTTACTTTTATTTTTTAAACGAAGACTAAAGCAAGGAAGGTATTCGATGTTGTGCTTGAATATTGATGCACATTCATGTAGTTAGTTACTTAGTGAATAGATTCAATCAATATCTATTAAAAATGTCAAAATGGTTGTGTTAAGAAGAGAATCTCAAGATCATTTCTTGTTTTCATTGAACTCTTTCTTTCAGTTGAGGGCCTTCTTTCGAGCTCTAGGAAGTAACTTCTTGCTTGCACAATCATAGTTTGAAAATGTGGTATGTTATCTTTCTCCCTACACTTAGGTAAACTTCAATGTGAATGTTCCTCATTTTTCACCAATGACTATGAAAACAACAATCCATGAGATAGATAAGAACAATCTTCACTTCAAGTTGGGTCTACTTTAACTTATTCTTAACTAAAATTACCGGTATAAATTGAGTTTATGAAAATCTTCTTTTTTAATATGTTTTTACTGGTTACGGCGATGGAGTTTGGTTTGGTTATCTAGTTATTGAATTTTTATAAGTGTGTTTTTACTTAAAT

mRNA sequence

ATGCCTCTCAAAGGGAAGCAACAGTTTGAATTTCATACAGGTCCAACACTTGATGTTGATTGGCGCAACAATGTATCATTTGCAACAAGTTCCACAGATAACATGATATTTGTCTGCAAAATTGGAGAGACTCATCCTATTAAAACTTTTGCAGGACATCAGGGTGAAGTGAATTGTGTCAAGTGGAATCCCACAGGATCATTGTTGGCTTCGTGTTCTGATGATATCACAACTAAGTTGAGGGCCTTCTTTCGAGCTCTAGGAAGTAACTTCTTGCTTGCACAATCATAGTTTGAAAATGTGGTATGTTATCTTTCTCCCTACACTTAGGTAAACTTCAATGTGAATGTTCCTCATTTTTCACCAATGACTATGAAAACAACAATCCATGAGATAGATAAGAACAATCTTCACTTCAAGTTGGGTCTACTTTAACTTATTCTTAACTAAAATTACCGGTATAAATTGAGTTTATGAAAATCTTCTTTTTTAATATGTTTTTACTGGTTACGGCGATGGAGTTTGGTTTGGTTATCTAGTTATTGAATTTTTATAAGTGTGTTTTTACTTAAAT

Coding sequence (CDS)

ATGCCTCTCAAAGGGAAGCAACAGTTTGAATTTCATACAGGTCCAACACTTGATGTTGATTGGCGCAACAATGTATCATTTGCAACAAGTTCCACAGATAACATGATATTTGTCTGCAAAATTGGAGAGACTCATCCTATTAAAACTTTTGCAGGACATCAGGGTGAAGTGAATTGTGTCAAGTGGAATCCCACAGGATCATTGTTGGCTTCGTGTTCTGATGATATCACAACTAAGTTGAGGGCCTTCTTTCGAGCTCTAGGAAGTAACTTCTTGCTTGCACAATCATAG

Protein sequence

MPLKGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKLRAFFRALGSNFLLAQS

Homology

[Close]

BLAST of Tan0017781 vs. ExPASy Swiss-Prot
Match: Q9FN19 (WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana OX=3702 GN=HOS15 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.7e-34
Identity = 64/75 (85.33%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 6   KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPT 65
           KQQFEFH+GPTLDVDWRNNVSFATSSTD+MI++CKIGET P KTF GHQGEVNCVKW+PT
Sbjct: 400 KQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPT 459

Query: 66  GSLLASCSDDITTKL 81
           GSLLASCSDD T K+
Sbjct: 460 GSLLASCSDDSTAKI 474

[Close]

BLAST of Tan0017781 vs. ExPASy Swiss-Prot
Match: Q9BQ87 (F-box-like/WD repeat-containing protein TBL1Y OS=Homo sapiens OX=9606 GN=TBL1Y PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 5.5e-25
Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 4   KGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWN 63
           + KQQF FH+ P LDVDW+NN++FA+ STD  I VC++G  HP+KTF GH  EVN +KW+
Sbjct: 309 EAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWD 368

Query: 64  PTGSLLASCSDDITTKL 81
           P+G LLASCSDD+T K+
Sbjct: 369 PSGMLLASCSDDMTLKI 385

[Close]

BLAST of Tan0017781 vs. ExPASy Swiss-Prot
Match: Q7SZM9 (F-box-like/WD repeat-containing protein TBL1XR1-A OS=Xenopus laevis OX=8355 GN=tbl1xr1-a PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.2e-25
Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 4   KGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWN 63
           + KQQF FH+ P LDVDW++N +FA+ STD  I VCK+G+  PIKTF GH  EVN +KW+
Sbjct: 304 EAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWD 363

Query: 64  PTGSLLASCSDDITTKL 81
           PTG+LLASCSDD+T K+
Sbjct: 364 PTGNLLASCSDDMTLKI 380

[Close]

BLAST of Tan0017781 vs. ExPASy Swiss-Prot
Match: Q6GPC6 (F-box-like/WD repeat-containing protein TBL1XR1-B OS=Xenopus laevis OX=8355 GN=tbl1xr1-b PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.2e-25
Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 4   KGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWN 63
           + KQQF FH+ P LDVDW++N +FA+ STD  I VCK+G+  PIKTF GH  EVN +KW+
Sbjct: 307 EAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWD 366

Query: 64  PTGSLLASCSDDITTKL 81
           PTG+LLASCSDD+T K+
Sbjct: 367 PTGNLLASCSDDMTLKI 383

[Close]

BLAST of Tan0017781 vs. ExPASy Swiss-Prot
Match: Q9BZK7 (F-box-like/WD repeat-containing protein TBL1XR1 OS=Homo sapiens OX=9606 GN=TBL1XR1 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.2e-25
Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 4   KGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWN 63
           + KQQF FH+ P LDVDW++N +FA+ STD  I VCK+G+  PIKTF GH  EVN +KW+
Sbjct: 299 EAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWD 358

Query: 64  PTGSLLASCSDDITTKL 81
           PTG+LLASCSDD+T K+
Sbjct: 359 PTGNLLASCSDDMTLKI 375

[Close]

BLAST of Tan0017781 vs. NCBI nr
Match: KAG7027035.1 (WD40 repeat-containing protein HOS15 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 158.3 bits (399), Expect = 3.3e-35
Identity = 75/91 (82.42%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 6   KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPT 65
           KQQFEFH+GPTLDVDWRNNVSFATSSTDNMIFVCKIGET PIKTFAGHQGEVNCVKW+PT
Sbjct: 362 KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIFVCKIGETRPIKTFAGHQGEVNCVKWDPT 421

Query: 66  GSLLASCSDDITTKLRAFFRALGS---NFLL 94
           GSLLASCSDDIT K+    +  GS   NFL+
Sbjct: 422 GSLLASCSDDITAKVICIAQFCGSFAPNFLV 452

[Close]

BLAST of Tan0017781 vs. NCBI nr
Match: XP_030455779.1 (WD40 repeat-containing protein HOS15 [Syzygium oleosum])

HSP 1 Score: 157.9 bits (398), Expect = 4.3e-35
Identity = 70/77 (90.91%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 4   KGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWN 63
           +GKQQFEFHTGPTLDVDWRNNVSFATSSTDNMI+VCKIGE  PIKTFAGHQGEVNCVKW+
Sbjct: 345 EGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWD 404

Query: 64  PTGSLLASCSDDITTKL 81
           PTGSLLASCSDDIT K+
Sbjct: 405 PTGSLLASCSDDITAKI 421

[Close]

BLAST of Tan0017781 vs. NCBI nr
Match: XP_039012509.1 (WD40 repeat-containing protein HOS15-like [Hibiscus syriacus])

HSP 1 Score: 156.8 bits (395), Expect = 9.6e-35
Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 6   KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPT 65
           KQQFEFHTGPTLDVDWRNNVSFATSSTDNMI+VCKIGET PIKTFAGHQGEVNCVKW+PT
Sbjct: 354 KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPT 413

Query: 66  GSLLASCSDDITTKL 81
           GSLLASCSDDIT K+
Sbjct: 414 GSLLASCSDDITAKI 428

[Close]

BLAST of Tan0017781 vs. NCBI nr
Match: XP_039069758.1 (WD40 repeat-containing protein HOS15-like [Hibiscus syriacus])

HSP 1 Score: 156.8 bits (395), Expect = 9.6e-35
Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 6   KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPT 65
           KQQFEFHTGPTLDVDWRNNVSFATSSTDNMI+VCKIGET PIKTFAGHQGEVNCVKW+PT
Sbjct: 354 KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPT 413

Query: 66  GSLLASCSDDITTKL 81
           GSLLASCSDDIT K+
Sbjct: 414 GSLLASCSDDITAKI 428

[Close]

BLAST of Tan0017781 vs. NCBI nr
Match: PKI41252.1 (hypothetical protein CRG98_038364 [Punica granatum])

HSP 1 Score: 156.4 bits (394), Expect = 1.3e-34
Identity = 69/75 (92.00%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 6   KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPT 65
           KQQFEFHTGPTLDVDWRNNVSFATSSTDNMI+VCKIGET P+KTFAGHQGEVNCVKW+PT
Sbjct: 161 KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIYVCKIGETRPVKTFAGHQGEVNCVKWDPT 220

Query: 66  GSLLASCSDDITTKL 81
           GSLLASCSDDIT K+
Sbjct: 221 GSLLASCSDDITAKI 235

[Close]

BLAST of Tan0017781 vs. ExPASy TrEMBL
Match: A0A218XCN9 (WD40 repeat-containing protein HOS15 OS=Punica granatum OX=22663 GN=LOC116207790 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.1e-35
Identity = 69/75 (92.00%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 6   KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPT 65
           KQQFEFHTGPTLDVDWRNNVSFATSSTDNMI+VCKIGET P+KTFAGHQGEVNCVKW+PT
Sbjct: 349 KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIYVCKIGETRPVKTFAGHQGEVNCVKWDPT 408

Query: 66  GSLLASCSDDITTKL 81
           GSLLASCSDDIT K+
Sbjct: 409 GSLLASCSDDITAKI 423

[Close]

BLAST of Tan0017781 vs. ExPASy TrEMBL
Match: A0A151QZK0 (F-box-like/WD repeat-containing protein TBL1XR1-B OS=Cajanus cajan OX=3821 GN=KK1_043160 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.1e-35
Identity = 68/75 (90.67%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 6   KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPT 65
           KQQFEFH+GPTLDVDWRNNVSFATSSTDNMI+VCK+GE+HPIKTFAGHQGEVNCVKW+PT
Sbjct: 391 KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKVGESHPIKTFAGHQGEVNCVKWDPT 450

Query: 66  GSLLASCSDDITTKL 81
           GSLLASCSDDIT K+
Sbjct: 451 GSLLASCSDDITAKI 465

[Close]

BLAST of Tan0017781 vs. ExPASy TrEMBL
Match: A0A6J1KRB1 (WD40 repeat-containing protein HOS15-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496930 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.1e-35
Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 6   KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPT 65
           KQQFEFH+GPTLDVDWRNNVSFATSSTDNMIFVCKIGET PIKTFAGHQGEVNCVKW+PT
Sbjct: 369 KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIFVCKIGETRPIKTFAGHQGEVNCVKWDPT 428

Query: 66  GSLLASCSDDITTKL 81
           GSLLASCSDDIT K+
Sbjct: 429 GSLLASCSDDITAKI 443

[Close]

BLAST of Tan0017781 vs. ExPASy TrEMBL
Match: A0A6J1KNQ2 (WD40 repeat-containing protein HOS15-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496930 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.1e-35
Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 6   KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPT 65
           KQQFEFH+GPTLDVDWRNNVSFATSSTDNMIFVCKIGET PIKTFAGHQGEVNCVKW+PT
Sbjct: 354 KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIFVCKIGETRPIKTFAGHQGEVNCVKWDPT 413

Query: 66  GSLLASCSDDITTKL 81
           GSLLASCSDDIT K+
Sbjct: 414 GSLLASCSDDITAKI 428

[Close]

BLAST of Tan0017781 vs. ExPASy TrEMBL
Match: A0A2I0IB79 (WD_REPEATS_REGION domain-containing protein OS=Punica granatum OX=22663 GN=CRG98_038364 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.1e-35
Identity = 69/75 (92.00%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 6   KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPT 65
           KQQFEFHTGPTLDVDWRNNVSFATSSTDNMI+VCKIGET P+KTFAGHQGEVNCVKW+PT
Sbjct: 161 KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIYVCKIGETRPVKTFAGHQGEVNCVKWDPT 220

Query: 66  GSLLASCSDDITTKL 81
           GSLLASCSDDIT K+
Sbjct: 221 GSLLASCSDDITAKI 235

[Close]

BLAST of Tan0017781 vs. TAIR 10
Match: AT5G67320.1 (WD-40 repeat family protein )

HSP 1 Score: 146.4 bits (368), Expect = 1.2e-35
Identity = 64/75 (85.33%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 6   KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPT 65
           KQQFEFH+GPTLDVDWRNNVSFATSSTD+MI++CKIGET P KTF GHQGEVNCVKW+PT
Sbjct: 400 KQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPT 459

Query: 66  GSLLASCSDDITTKL 81
           GSLLASCSDD T K+
Sbjct: 460 GSLLASCSDDSTAKI 474

[Close]

BLAST of Tan0017781 vs. TAIR 10
Match: AT5G25150.1 (TBP-associated factor 5 )

HSP 1 Score: 44.3 bits (103), Expect = 6.5e-05
Identity = 18/54 (33.33%), Postives = 31/54 (57.41%), Query Frame = 0


Query: 27  FATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL 81
           FA+ S D    +  +    P++  AGH  +V+CV+W+P  + +A+ S D T +L
Sbjct: 475 FASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRL 528

[Close]

BLAST of Tan0017781 vs. TAIR 10
Match: AT2G26060.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 1.4e-04
Identity = 26/69 (37.68%), Postives = 32/69 (46.38%), Query Frame = 0


Query: 10  EFHTGPTLDVDWR-NNVSFATSSTDNMIFVCKI--GETHPIKTFAGHQGEVNCVKWNPTG 69
           E HT       W  +    AT+S D    + K    E   I T  GH+ EV  V WN +G
Sbjct: 71  ETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASG 130

Query: 70  SLLASCSDD 76
           S LA+CS D
Sbjct: 131 SCLATCSRD 139

[Close]

BLAST of Tan0017781 vs. TAIR 10
Match: AT2G26060.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 1.4e-04
Identity = 26/69 (37.68%), Postives = 32/69 (46.38%), Query Frame = 0


Query: 10  EFHTGPTLDVDWR-NNVSFATSSTDNMIFVCKI--GETHPIKTFAGHQGEVNCVKWNPTG 69
           E HT       W  +    AT+S D    + K    E   I T  GH+ EV  V WN +G
Sbjct: 71  ETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASG 130

Query: 70  SLLASCSDD 76
           S LA+CS D
Sbjct: 131 SCLATCSRD 139

[Close]

BLAST of Tan0017781 vs. TAIR 10
Match: AT5G64730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 41.6 bits (96), Expect = 4.2e-04
Identity = 17/53 (32.08%), Postives = 27/53 (50.94%), Query Frame = 0


Query: 23  NNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDD 76
           +N  F +   D  ++   +     I+ F GH GEVN VK+N + S++ S   D
Sbjct: 71  DNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFD 123

The following BLAST results are available for this feature:

BLAST of Tan0017781 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN19	1.7e-34	85.33	WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana OX=3702 GN=HOS15 PE...	[more]
Q9BQ87	5.5e-25	61.04	F-box-like/WD repeat-containing protein TBL1Y OS=Homo sapiens OX=9606 GN=TBL1Y P...	[more]
Q7SZM9	7.2e-25	62.34	F-box-like/WD repeat-containing protein TBL1XR1-A OS=Xenopus laevis OX=8355 GN=t...	[more]
Q6GPC6	7.2e-25	62.34	F-box-like/WD repeat-containing protein TBL1XR1-B OS=Xenopus laevis OX=8355 GN=t...	[more]
Q9BZK7	7.2e-25	62.34	F-box-like/WD repeat-containing protein TBL1XR1 OS=Homo sapiens OX=9606 GN=TBL1X...	[more]

BLAST of Tan0017781 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027035.1	3.3e-35	82.42	WD40 repeat-containing protein HOS15 [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_030455779.1	4.3e-35	90.91	WD40 repeat-containing protein HOS15 [Syzygium oleosum]	[more]
XP_039012509.1	9.6e-35	93.33	WD40 repeat-containing protein HOS15-like [Hibiscus syriacus]	[more]
XP_039069758.1	9.6e-35	93.33	WD40 repeat-containing protein HOS15-like [Hibiscus syriacus]	[more]
PKI41252.1	1.3e-34	92.00	hypothetical protein CRG98_038364 [Punica granatum]	[more]

BLAST of Tan0017781 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A218XCN9	6.1e-35	92.00	WD40 repeat-containing protein HOS15 OS=Punica granatum OX=22663 GN=LOC116207790...	[more]
A0A151QZK0	6.1e-35	90.67	F-box-like/WD repeat-containing protein TBL1XR1-B OS=Cajanus cajan OX=3821 GN=KK...	[more]
A0A6J1KRB1	6.1e-35	93.33	WD40 repeat-containing protein HOS15-like isoform X1 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1KNQ2	6.1e-35	93.33	WD40 repeat-containing protein HOS15-like isoform X2 OS=Cucurbita maxima OX=3661...	[more]
A0A2I0IB79	6.1e-35	92.00	WD_REPEATS_REGION domain-containing protein OS=Punica granatum OX=22663 GN=CRG98...	[more]

BLAST of Tan0017781 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67320.1	1.2e-35	85.33	WD-40 repeat family protein	[more]
AT5G25150.1	6.5e-05	33.33	TBP-associated factor 5	[more]
AT2G26060.1	1.4e-04	37.68	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G26060.2	1.4e-04	37.68	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G64730.1	4.2e-04	32.08	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 2..40 e-value: 3.6 score: 13.5 coord: 43..82 e-value: 1.2E-6 score: 38.1
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 46..75 e-value: 6.3E-7 score: 30.0
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 50..80 score: 9.840087
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 3..83 e-value: 6.1E-28 score: 99.5
None	No IPR available	PANTHER	PTHR22846:SF61	F-BOX-LIKE/WD REPEAT TBL1XR1-LIKE PROTEIN	coord: 6..81
None	No IPR available	PANTHER	PTHR22846	WD40 REPEAT PROTEIN	coord: 6..81
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 7..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0017781.1	Tan0017781.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding