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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCTTCTTCCATGAGACTCCCTCATTTTGCTTTTGCTGCTGCTTTGGTCCTTGCAATGGTGTGCTTAGAGATGAAGGTCAATGCCATTGAGGATGAGATAGCTCCAATGCCTGCCATGGCTGCTGGCTCTGCATTTCCTTCTACTGTTGCCTTTGCTTTCAATTCTGTAATCCCTCTTTTGCTCTGTATTTTAGGTGTCTAA mRNA sequence ATGGCTTCTTCCATGAGACTCCCTCATTTTGCTTTTGCTGCTGCTTTGGTCCTTGCAATGGTGTGCTTAGAGATGAAGGTCAATGCCATTGAGGATGAGATAGCTCCAATGCCTGCCATGGCTGCTGGCTCTGCATTTCCTTCTACTGTTGCCTTTGCTTTCAATTCTGTAATCCCTCTTTTGCTCTGTATTTTAGGTGTCTAA Coding sequence (CDS) ATGGCTTCTTCCATGAGACTCCCTCATTTTGCTTTTGCTGCTGCTTTGGTCCTTGCAATGGTGTGCTTAGAGATGAAGGTCAATGCCATTGAGGATGAGATAGCTCCAATGCCTGCCATGGCTGCTGGCTCTGCATTTCCTTCTACTGTTGCCTTTGCTTTCAATTCTGTAATCCCTCTTTTGCTCTGTATTTTAGGTGTCTAA Protein sequence MASSMRLPHFAFAAALVLAMVCLEMKVNAIEDEIAPMPAMAAGSAFPSTVAFAFNSVIPLLLCILGV
Homology
BLAST of Tan0017765 vs. NCBI nr
Match: KGN58599.1 (hypothetical protein Csa_001638 [Cucumis sativus]) HSP 1 Score: 85.5 bits (210), Expect = 1.9e-13 Identity = 49/69 (71.01%), Postives = 56/69 (81.16%), Query Frame = 0
Query: 1 MASSMRLPHF-AFAAALVLAMVCLEM-KVNAIEDEIAPMPAMAAGSAFPSTVAFAFNSVI 60
MASSMR PHF A LVLAMV +EM KV++IEDE+APMPAMAAG AFPS+VA FN V+
Sbjct: 1 MASSMRFPHFVVVAVVLVLAMVSIEMKKVDSIEDELAPMPAMAAGFAFPSSVALGFNFVV 60
Query: 61 PLLLCILGV 68
PLLLC+ GV
Sbjct: 61 PLLLCVFGV 69
BLAST of Tan0017765 vs. NCBI nr
Match: KAG6581583.1 (hypothetical protein SDJN03_21585, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 79.3 bits (194), Expect = 1.4e-11 Identity = 49/68 (72.06%), Postives = 54/68 (79.41%), Query Frame = 0
Query: 1 MASSMRLPH-FAFAAALVLAMVCLEM-KVNAIEDEIAPMPAMAAGSAFPSTVAFAFNSVI 60
MA SMRLPH +A AA L LAMVC EM KV+ IE EI+PMPAMAAGSA PSTVA+AFN+V
Sbjct: 1 MAPSMRLPHYYATAAVLALAMVCFEMKKVHGIEAEISPMPAMAAGSASPSTVAYAFNAVF 60
Query: 61 PLLLCILG 67
P LLC G
Sbjct: 61 P-LLCTFG 67
BLAST of Tan0017765 vs. ExPASy TrEMBL
Match: A0A0A0LCE5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G697920 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 9.2e-14 Identity = 49/69 (71.01%), Postives = 56/69 (81.16%), Query Frame = 0
Query: 1 MASSMRLPHF-AFAAALVLAMVCLEM-KVNAIEDEIAPMPAMAAGSAFPSTVAFAFNSVI 60
MASSMR PHF A LVLAMV +EM KV++IEDE+APMPAMAAG AFPS+VA FN V+
Sbjct: 1 MASSMRFPHFVVVAVVLVLAMVSIEMKKVDSIEDELAPMPAMAAGFAFPSSVALGFNFVV 60
Query: 61 PLLLCILGV 68
PLLLC+ GV
Sbjct: 61 PLLLCVFGV 69
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KGN58599.1 | 1.9e-13 | 71.01 | hypothetical protein Csa_001638 [Cucumis sativus] | [more] |
| KAG6581583.1 | 1.4e-11 | 72.06 | hypothetical protein SDJN03_21585, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LCE5 | 9.2e-14 | 71.01 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G697920 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
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