Tan0017608 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCCCCACCCAACTTCCATCTTCCCTCCCATCTTACGTCTCATACTCGTATTCTCTCTTTCTCTCTCTATCGCCATCGCCGTTTCTCTCTCTAGATTCGGTATTATATAAGCCATCGCCAGGTAGTGACAGGGTCCAGGTATAGATTATTCGGAACGCCTCTTCGATTTAGGGTTTTGTTTTTGTTCTTCTGAGATGGAGGATTGGAAGCAGAGCAATCGCGAGAACAGAGTGACGATGGAGAAGATCGGAACTCCGTTTCCCGTTCATAGCCAGGTCAGGAAGATCAAGGAGGAATCGGAGACGATCATCGATTGGCGACCGGGACAGCCGGAGATCAGACCGCCCGCCGTCACCTTCCGAGACCTTAATCGGCCGATCTCTCGCTCGCCGCTTGGAATCTCCTGCCGGCCGATTTCAGTGGGGGAATCGTAGAGATATACTCTTGGTTTAGGGCTTATTTCTGTGAGCAGATGGAGATGGAGATTGATTGACTGTTCTCTGTTTTCGTTTCTCTTCCCTTTTCCGATACTACGGATTGAGATAGCCCTAGCCTTGCCTAGTTATTTTCTTTTTCTTTTTCTTTTTCTTCTATTGTAAATATTTTGTTTTGTTTAATAGAGAAATTTTTGGATTTTGT ATTTCCCCACCCAACTTCCATCTTCCCTCCCATCTTACGTCTCATACTCGTATTCTCTCTTTCTCTCTCTATCGCCATCGCCGTTTCTCTCTCTAGATTCGGTATTATATAAGCCATCGCCAGGTAGTGACAGGGTCCAGGTATAGATTATTCGGAACGCCTCTTCGATTTAGGGTTTTGTTTTTGTTCTTCTGAGATGGAGGATTGGAAGCAGAGCAATCGCGAGAACAGAGTGACGATGGAGAAGATCGGAACTCCGTTTCCCGTTCATAGCCAGGTCAGGAAGATCAAGGAGGAATCGGAGACGATCATCGATTGGCGACCGGGACAGCCGGAGATCAGACCGCCCGCCGTCACCTTCCGAGACCTTAATCGGCCGATCTCTCGCTCGCCGCTTGGAATCTCCTGCCGGCCGATTTCAGTGGGGGAATCGTAGAGATATACTCTTGGTTTAGGGCTTATTTCTGTGAGCAGATGGAGATGGAGATTGATTGACTGTTCTCTGTTTTCGTTTCTCTTCCCTTTTCCGATACTACGGATTGAGATAGCCCTAGCCTTGCCTAGTTATTTTCTTTTTCTTTTTCTTTTTCTTCTATTGTAAATATTTTGTTTTGTTTAATAGAGAAATTTTTGGATTTTGT ATGGAGGATTGGAAGCAGAGCAATCGCGAGAACAGAGTGACGATGGAGAAGATCGGAACTCCGTTTCCCGTTCATAGCCAGGTCAGGAAGATCAAGGAGGAATCGGAGACGATCATCGATTGGCGACCGGGACAGCCGGAGATCAGACCGCCCGCCGTCACCTTCCGAGACCTTAATCGGCCGATCTCTCGCTCGCCGCTTGGAATCTCCTGCCGGCCGATTTCAGTGGGGGAATCGTAG MEDWKQSNRENRVTMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES Homology
BLAST of Tan0017608 vs. NCBI nr
Match: KAG7012158.1 (hypothetical protein SDJN02_24910, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 137.9 bits (346), Expect = 3.8e-29 Identity = 67/79 (84.81%), Postives = 70/79 (88.61%), Query Frame = 0
BLAST of Tan0017608 vs. NCBI nr
Match: KAG6572977.1 (NF-X1-type zinc finger protein NFXL1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 131.7 bits (330), Expect = 2.7e-27 Identity = 64/75 (85.33%), Postives = 66/75 (88.00%), Query Frame = 0
BLAST of Tan0017608 vs. NCBI nr
Match: KAG6584306.1 (DEAD-box ATP-dependent RNA helicase 27, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 126.3 bits (316), Expect = 1.1e-25 Identity = 61/79 (77.22%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of Tan0017608 vs. NCBI nr
Match: TYJ99047.1 (hypothetical protein E5676_scaffold248G002510 [Cucumis melo var. makuwa]) HSP 1 Score: 104.0 bits (258), Expect = 6.1e-19 Identity = 53/73 (72.60%), Postives = 57/73 (78.08%), Query Frame = 0
BLAST of Tan0017608 vs. NCBI nr
Match: KGN64190.1 (hypothetical protein Csa_013611, partial [Cucumis sativus]) HSP 1 Score: 102.8 bits (255), Expect = 1.4e-18 Identity = 51/66 (77.27%), Postives = 55/66 (83.33%), Query Frame = 0
BLAST of Tan0017608 vs. ExPASy TrEMBL
Match: A0A5D3BIV4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002510 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.0e-19 Identity = 53/73 (72.60%), Postives = 57/73 (78.08%), Query Frame = 0
BLAST of Tan0017608 vs. ExPASy TrEMBL
Match: A0A0A0LQJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042955 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 6.6e-19 Identity = 51/66 (77.27%), Postives = 55/66 (83.33%), Query Frame = 0
BLAST of Tan0017608 vs. ExPASy TrEMBL
Match: A0A498I238 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_023484 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 9.8e-15 Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 0
BLAST of Tan0017608 vs. ExPASy TrEMBL
Match: A0A540KEP9 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_041834 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 9.8e-15 Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 0
BLAST of Tan0017608 vs. ExPASy TrEMBL
Match: A0A540NFV0 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_004486 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.2e-14 Identity = 43/77 (55.84%), Postives = 58/77 (75.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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