Tan0017599 (gene) Snake gourd v1

Overview
NameTan0017599
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionthylakoid lumenal 17.9 kDa protein, chloroplastic
LocationLG05: 81750247 .. 81752426 (-)
RNA-Seq ExpressionTan0017599
SyntenyTan0017599
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACAGAATCAAGCATGAGCTCACTCCAATTTCGCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAACCAGTACCACTCTCTCCCTTCCATGGCTGCTCTTCAAAATTCAAACCACAAACCCATTTTCCTCTCTCATCTCCTTTCTTTAGCCCTCTCCATAACACTAAGCTCGCCATTTCCTTCTCTCGCAATCCCTTCTCTTAACTCCCTCTCCTCTCCACTTTCTCCCACCACTCCATTTTCTCAATCCAAGGACTTACCAATCGGACTTGAAAACGGGTACGCTCTGAACTTTCCTCGTTAATCCCTCGATTCCTTTTGTAATTTCTCTTAATTGTCTCGCTCACTGCTTGAACTGTTGTAATTTCTACTGCTTCTGTTCAATTTTGTTGCCAGTTTCTGTCTGCCCTAATTTTACATTGGTTTCTGAACTGAATCATTGACAATGTAGCTAAATGTTATTATCTTGATGTTGCAGGAAAATTAGGCCCTGCCCATCAACCAATCCGTCTTGTGTTTCTACAAACCCTAAATCGTCATCCTTTGCCTTCCCTTTAAGCATTCCTGAGAGTTTTACTGGGAATCCAATTCAGGTTTTAGTTCTCTGAAAACCGAGCATGATTTGCTTGAATGTTGTTCTAGATGTTTGGTTTCTCTTGGTGTTGTTTTTCATGTTTCTGCTGCTTAATTTATTTGCAGAAGCTACAGGAAGTGATTCTTGAAACGCAGAGGAATGCAAAAATTCAGATGGTGGAAGATACCCCATATGGTAATCAAACTAAAGTTATCAATAGGAGATTTGAACTTTATATTACAAATTGATATGCCTCACCATGTTCTAATTAAACTGCTGAGATAGAGATGAGAATGAACTTAAAAAAAATAAAAATAAAGATAGAGATGAGAAAGACTCCTATTTACCTAATGAGCCGCAGAGCCAACCCATTTGGCTTATTCTTTTGAATTCTTTTTTCTTTTTGTGACCTCAATAAGATATGGGGTGGGGGAGGTTTGAACCGTACCGTCGAGAGTATATCCCTTAACTAGTTGACCTAGGTCTAGGTTGAAGTTGAGCTTATTCTTTTAAATTTAATAATGCTTTTAACAAAGAGAAAGGATGTGAATCTTTAGTTGAATTACAAGTTTTATTTTTGAAATTTAAAATGTATCTAAACAAGCCTCTAAATTTTCAATCTTATATCTAACATGTTTTGAAACTCTAAAAAGTGTCTAATAAACATTTTTGTATTTAATAGGTTTCTGAATTTTAAAAACTCTCATAAGCCAATAAGAAAAAAAAAATCTCATAAGTCAAGGAATAAGGATCTATTACGCACAAAATTGTAAGTTCGTAGAGCTCTTTTTAGATTCAAAATCGGAAGATCAAGAACTTGTTTTGTTTAATGCTTTCAAAATTCAAAGACCAATTAGATAGAATATAGAAAGTTTAGGACGTAGTAGATACTTTAAGTCCTTATTTGATGTAACTCTCAAAGTTCAAAAACCAAACTTAATAACATAACATAAATCCTTAGTTCAAATCCTTATAATGTCATTTCCATTCCTCTCATCTTAATACTGTTCGGCTAACGTGTTAGATTAGATCTCATGTTAATATCTCGAGCCAACACATAAGAGAGAGTATACTTATGCCTTATAGAACAACATGCATTGATGATTATCACAGGTCAGTATTTAGAAGCTGAGGTTGATGGGAACTTTGGGCGAGATGTGATTGAGTTTTTGGTGAAAGGAGATGTGGCTGCTTATAGAATTATGGCAACAAAAGTGACTTATGTGTATCCATTCACAACTGCTTTAGGGGACTCCAAAGGACAGGAAGAACGAATGAAGAAGATCATAGACCAGTTGGATTGGTATTCTCCAACCTTCGATTCTATGGATGACTAATACAAATCCCGTTTCTTCTATTTTCTTTATTTTTTACCCACTCTCATTAAACTCTTTTTCAGCTGCAAATTATTTTGCCCTCATATTAAAAAAAAAAGTTATTTCAATGACATGTCGTCTATGATTAGTCTTCTTAATGTTTGTTGAGTTATTTATATCACTAATTTTGTGAATTATTTTGCAGGGCTTTGGCCCTAGCTCGATTGATTGAGGCACTCTTCATTATTGAAAACTATATAATAATAATAATAATAATAATAATTTTT

mRNA sequence

GACAGAATCAAGCATGAGCTCACTCCAATTTCGCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAACCAGTACCACTCTCTCCCTTCCATGGCTGCTCTTCAAAATTCAAACCACAAACCCATTTTCCTCTCTCATCTCCTTTCTTTAGCCCTCTCCATAACACTAAGCTCGCCATTTCCTTCTCTCGCAATCCCTTCTCTTAACTCCCTCTCCTCTCCACTTTCTCCCACCACTCCATTTTCTCAATCCAAGGACTTACCAATCGGACTTGAAAACGGGAAAATTAGGCCCTGCCCATCAACCAATCCGTCTTGTGTTTCTACAAACCCTAAATCGTCATCCTTTGCCTTCCCTTTAAGCATTCCTGAGAGTTTTACTGGGAATCCAATTCAGAAGCTACAGGAAGTGATTCTTGAAACGCAGAGGAATGCAAAAATTCAGATGGTGGAAGATACCCCATATGGTCAGTATTTAGAAGCTGAGGTTGATGGGAACTTTGGGCGAGATGTGATTGAGTTTTTGGTGAAAGGAGATGTGGCTGCTTATAGAATTATGGCAACAAAAGTGACTTATGTGTATCCATTCACAACTGCTTTAGGGGACTCCAAAGGACAGGAAGAACGAATGAAGAAGATCATAGACCAGTTGGATTGGTATTCTCCAACCTTCGATTCTATGGATGACTAATACAAATCCCGTTTCTTCTATTTTCTTTATTTTTTACCCACTCTCATTAAACTCTTTTTCAGCTGCAAATTATTTTGCCCTCATATTAAAAAAAAAAGTTATTTCAATGACATGTCGTCTATGATTAGTCTTCTTAATGTTTGTTGAGTTATTTATATCACTAATTTTGTGAATTATTTTGCAGGGCTTTGGCCCTAGCTCGATTGATTGAGGCACTCTTCATTATTGAAAACTATATAATAATAATAATAATAATAATAATTTTT

Coding sequence (CDS)

ATGAGCTCACTCCAATTTCGCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAACCAGTACCACTCTCTCCCTTCCATGGCTGCTCTTCAAAATTCAAACCACAAACCCATTTTCCTCTCTCATCTCCTTTCTTTAGCCCTCTCCATAACACTAAGCTCGCCATTTCCTTCTCTCGCAATCCCTTCTCTTAACTCCCTCTCCTCTCCACTTTCTCCCACCACTCCATTTTCTCAATCCAAGGACTTACCAATCGGACTTGAAAACGGGAAAATTAGGCCCTGCCCATCAACCAATCCGTCTTGTGTTTCTACAAACCCTAAATCGTCATCCTTTGCCTTCCCTTTAAGCATTCCTGAGAGTTTTACTGGGAATCCAATTCAGAAGCTACAGGAAGTGATTCTTGAAACGCAGAGGAATGCAAAAATTCAGATGGTGGAAGATACCCCATATGGTCAGTATTTAGAAGCTGAGGTTGATGGGAACTTTGGGCGAGATGTGATTGAGTTTTTGGTGAAAGGAGATGTGGCTGCTTATAGAATTATGGCAACAAAAGTGACTTATGTGTATCCATTCACAACTGCTTTAGGGGACTCCAAAGGACAGGAAGAACGAATGAAGAAGATCATAGACCAGTTGGATTGGTATTCTCCAACCTTCGATTCTATGGATGACTAA

Protein sequence

MSSLQFRPPLVSPWKKKKNQYHSLPSMAALQNSNHKPIFLSHLLSLALSITLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSSFAFPLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMKKIIDQLDWYSPTFDSMDD
Homology
BLAST of Tan0017599 vs. ExPASy Swiss-Prot
Match: Q9SW33 (Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g24930 PE=1 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 4.8e-64
Identity = 131/195 (67.18%), Postives = 160/195 (82.05%), Query Frame = 0

Query: 32  NSNHKPI-FLSHLLSLALSITLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKDLPIGLENG 91
           +S   PI  L  L+S AL+I+L+S  P+LAIPSL+S S PL  TTPF+QSK +  GL NG
Sbjct: 34  SSTSPPISLLPKLISFALAISLTSFSPALAIPSLSS-SQPL--TTPFTQSKFVQTGLLNG 93

Query: 92  KIRPCPSTNPSCVSTNPKSSSFAFPLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTP 151
           KIRPCPSTNP CVSTNP SSSF+FPL+IPE+ T +PI+KL+E I+ TQ+N K  ++EDTP
Sbjct: 94  KIRPCPSTNPGCVSTNPTSSSFSFPLTIPETDTQDPIEKLKEAIMSTQKNPKFVVLEDTP 153

Query: 152 YGQYLEAEVD-GNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMKKI 211
           YG+Y+EAEV+ G F RDV+EFLVK DV AYR MATKVT+VYPFTTA GDSKGQEER+KK+
Sbjct: 154 YGRYVEAEVEGGGFSRDVMEFLVKQDVVAYRCMATKVTFVYPFTTAFGDSKGQEERLKKL 213

Query: 212 IDQLDWYSPTFDSMD 225
           IDQL WY+PTF+SM+
Sbjct: 214 IDQLGWYAPTFESME 225

BLAST of Tan0017599 vs. NCBI nr
Match: XP_038893869.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 411.8 bits (1057), Expect = 3.9e-111
Identity = 211/230 (91.74%), Postives = 219/230 (95.22%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPW--KKKKNQYH---SLPSMAALQNSNHKPIFLSHLLSLALSITLSSP 60
           MSSLQFRPPLVSPW  KKKKNQYH   S PSMAALQNSNHKPIFLSH+LS ALSITLSSP
Sbjct: 1   MSSLQFRPPLVSPWKKKKKKNQYHSPNSFPSMAALQNSNHKPIFLSHILSFALSITLSSP 60

Query: 61  FPSLAIPSLNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSSFAFP 120
           FPSLAIPSLNSLSSPLSPTTPFSQSK+LP GLENGKI PCPSTNPSCVSTNPKSSSFAFP
Sbjct: 61  FPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFAFP 120

Query: 121 LSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLVKGD 180
           L+IPE+F+GNPIQKLQE ILETQRN KIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLVKGD
Sbjct: 121 LNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGD 180

Query: 181 VAAYRIMATKVTYVYPFTTALGDSKGQEERMKKIIDQLDWYSPTFDSMDD 226
           VAAYRIMATKVTYVYPFTTALGDSKGQEERM+KIIDQL+WYSPTFDSMDD
Sbjct: 181 VAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLNWYSPTFDSMDD 230

BLAST of Tan0017599 vs. NCBI nr
Match: XP_004154123.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis sativus] >KGN64418.1 hypothetical protein Csa_013578 [Cucumis sativus])

HSP 1 Score: 402.5 bits (1033), Expect = 2.4e-108
Identity = 205/232 (88.36%), Postives = 217/232 (93.53%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKK----KNQYH---SLPSMAALQNSNHKPIFLSHLLSLALSITLS 60
           MSSLQFRPPLVSPWKKK    KNQYH   S+PSM+ LQN+NHKPIFLSHLLS ALSITLS
Sbjct: 1   MSSLQFRPPLVSPWKKKDNNNKNQYHSPVSVPSMSTLQNANHKPIFLSHLLSFALSITLS 60

Query: 61  SPFPSLAIPSLNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSSFA 120
           SPFPS+AIPSLNSLSSPLSPTTPFSQSK+LP GLENGKI PCPS NPSCVSTNPKSSSFA
Sbjct: 61  SPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSANPSCVSTNPKSSSFA 120

Query: 121 FPLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLVK 180
           FPL+IP++F+GNPIQKLQE ILETQRN KIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV+
Sbjct: 121 FPLNIPDNFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVR 180

Query: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMKKIIDQLDWYSPTFDSMDD 226
           GDVAAYRIMATKVTYVYPFTTALGDSKGQEERM+KIIDQL WYSPTFDSMDD
Sbjct: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 232

BLAST of Tan0017599 vs. NCBI nr
Match: XP_008439847.1 (PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis melo] >KAA0055338.1 thylakoid lumenal 17.9 kDa protein [Cucumis melo var. makuwa] >TYJ99264.1 thylakoid lumenal 17.9 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 401.7 bits (1031), Expect = 4.0e-108
Identity = 207/233 (88.84%), Postives = 217/233 (93.13%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKK-----KNQYH---SLPSMAALQNSNHKPIFLSHLLSLALSITL 60
           MSSLQFRP LVSPWKKK     KNQYH   S+PSM+ALQN NHKPIFLSHLLS ALSITL
Sbjct: 1   MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60

Query: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSSF 120
           +SPFPS+AIPSLNSLSSPLSPTTPFSQSK+LP GLENGKI PCPSTNPSCVSTNPKSSSF
Sbjct: 61  TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120

Query: 121 AFPLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
           AFPL+IP++F+GNPIQKLQE ILETQRN KIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180

Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMKKIIDQLDWYSPTFDSMDD 226
           KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERM+KIIDQL WYSPTFDSMDD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 233

BLAST of Tan0017599 vs. NCBI nr
Match: KAG7012320.1 (Thylakoid lumenal 17.9 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 398.7 bits (1023), Expect = 3.4e-107
Identity = 205/234 (87.61%), Postives = 213/234 (91.03%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKKKNQYHSL---------PSMAALQNSNHKPIFLSHLLSLALSIT 60
           MSSL FRP LVSPWKKKKN    L         PSMAAL N NHKPIF+SHLLS ALSIT
Sbjct: 1   MSSLHFRPALVSPWKKKKNNNQFLSAVLNRTSPPSMAALPNPNHKPIFISHLLSFALSIT 60

Query: 61  LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS 120
           L+SPFPSLAIPS NSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS
Sbjct: 61  LTSPFPSLAIPSFNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS 120

Query: 121 FAFPLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYLEAEVDGNFGRDVIEFL 180
           FAFPLSIPES+TGNPIQKLQEVILETQRNAKIQMVEDTPYGQY+EAEVDGNFGRDVIEFL
Sbjct: 121 FAFPLSIPESYTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYMEAEVDGNFGRDVIEFL 180

Query: 181 VKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMKKIIDQLDWYSPTFDSMDD 226
           V+GDVAAYRIMA KVTYVYPFTTALGDSKGQEERMKKII++LDWYSPTF+SM D
Sbjct: 181 VRGDVAAYRIMAAKVTYVYPFTTALGDSKGQEERMKKIIEELDWYSPTFESMVD 234

BLAST of Tan0017599 vs. NCBI nr
Match: XP_023542750.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 397.5 bits (1020), Expect = 7.6e-107
Identity = 205/234 (87.61%), Postives = 212/234 (90.60%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKKKNQYHSL---------PSMAALQNSNHKPIFLSHLLSLALSIT 60
           MSSL FRP LVSPWKKK N    L         PSMAAL NSNHKPIF+SHLLS ALSIT
Sbjct: 1   MSSLHFRPALVSPWKKKSNNNQFLSAVLNRTSPPSMAALPNSNHKPIFISHLLSFALSIT 60

Query: 61  LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS 120
           L+SPFPSLAIPS NSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPS NPSCVSTNPKSSS
Sbjct: 61  LTSPFPSLAIPSFNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSINPSCVSTNPKSSS 120

Query: 121 FAFPLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYLEAEVDGNFGRDVIEFL 180
           FAFPLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQY+EAEVDGNFGRDVIEFL
Sbjct: 121 FAFPLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYMEAEVDGNFGRDVIEFL 180

Query: 181 VKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMKKIIDQLDWYSPTFDSMDD 226
           V+GDVAAYRIMA KVTYVYPFTTALGDSKGQEERMKKII++LDWYSPTF+SM D
Sbjct: 181 VRGDVAAYRIMAAKVTYVYPFTTALGDSKGQEERMKKIIEELDWYSPTFESMVD 234

BLAST of Tan0017599 vs. ExPASy TrEMBL
Match: A0A0A0LRK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050570 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.1e-108
Identity = 205/232 (88.36%), Postives = 217/232 (93.53%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKK----KNQYH---SLPSMAALQNSNHKPIFLSHLLSLALSITLS 60
           MSSLQFRPPLVSPWKKK    KNQYH   S+PSM+ LQN+NHKPIFLSHLLS ALSITLS
Sbjct: 1   MSSLQFRPPLVSPWKKKDNNNKNQYHSPVSVPSMSTLQNANHKPIFLSHLLSFALSITLS 60

Query: 61  SPFPSLAIPSLNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSSFA 120
           SPFPS+AIPSLNSLSSPLSPTTPFSQSK+LP GLENGKI PCPS NPSCVSTNPKSSSFA
Sbjct: 61  SPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSANPSCVSTNPKSSSFA 120

Query: 121 FPLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLVK 180
           FPL+IP++F+GNPIQKLQE ILETQRN KIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV+
Sbjct: 121 FPLNIPDNFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVR 180

Query: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMKKIIDQLDWYSPTFDSMDD 226
           GDVAAYRIMATKVTYVYPFTTALGDSKGQEERM+KIIDQL WYSPTFDSMDD
Sbjct: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 232

BLAST of Tan0017599 vs. ExPASy TrEMBL
Match: A0A5A7UK02 (Thylakoid lumenal 17.9 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004760 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.0e-108
Identity = 207/233 (88.84%), Postives = 217/233 (93.13%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKK-----KNQYH---SLPSMAALQNSNHKPIFLSHLLSLALSITL 60
           MSSLQFRP LVSPWKKK     KNQYH   S+PSM+ALQN NHKPIFLSHLLS ALSITL
Sbjct: 1   MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60

Query: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSSF 120
           +SPFPS+AIPSLNSLSSPLSPTTPFSQSK+LP GLENGKI PCPSTNPSCVSTNPKSSSF
Sbjct: 61  TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120

Query: 121 AFPLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
           AFPL+IP++F+GNPIQKLQE ILETQRN KIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180

Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMKKIIDQLDWYSPTFDSMDD 226
           KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERM+KIIDQL WYSPTFDSMDD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 233

BLAST of Tan0017599 vs. ExPASy TrEMBL
Match: A0A1S3AZP3 (thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484512 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.0e-108
Identity = 207/233 (88.84%), Postives = 217/233 (93.13%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKK-----KNQYH---SLPSMAALQNSNHKPIFLSHLLSLALSITL 60
           MSSLQFRP LVSPWKKK     KNQYH   S+PSM+ALQN NHKPIFLSHLLS ALSITL
Sbjct: 1   MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60

Query: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSSF 120
           +SPFPS+AIPSLNSLSSPLSPTTPFSQSK+LP GLENGKI PCPSTNPSCVSTNPKSSSF
Sbjct: 61  TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120

Query: 121 AFPLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
           AFPL+IP++F+GNPIQKLQE ILETQRN KIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180

Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMKKIIDQLDWYSPTFDSMDD 226
           KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERM+KIIDQL WYSPTFDSMDD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 233

BLAST of Tan0017599 vs. ExPASy TrEMBL
Match: A0A6J1GT70 (thylakoid lumenal 17.9 kDa protein, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457250 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.4e-106
Identity = 206/234 (88.03%), Postives = 214/234 (91.45%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKKK--NQYHSL-------PSMAALQNSNHKPIFLSHLLSLALSIT 60
           MSSL FRP LVSPWKKKK  NQ+ S        PSMAAL N NHKPIF+SHLLS ALSIT
Sbjct: 1   MSSLHFRPALVSPWKKKKKNNQFLSAVLNRTSPPSMAALPNPNHKPIFISHLLSFALSIT 60

Query: 61  LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS 120
           L+SPFPSLAIPS NSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS
Sbjct: 61  LTSPFPSLAIPSFNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS 120

Query: 121 FAFPLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYLEAEVDGNFGRDVIEFL 180
           FAF LSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQY+EAEVDGNFGRDVIEFL
Sbjct: 121 FAFSLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYMEAEVDGNFGRDVIEFL 180

Query: 181 VKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMKKIIDQLDWYSPTFDSMDD 226
           V+GDVAAYRIMA KVTYVYPFTTALGDSKGQEERMKKII++LDWYSPTF+SM D
Sbjct: 181 VRGDVAAYRIMAAKVTYVYPFTTALGDSKGQEERMKKIIEELDWYSPTFESMVD 234

BLAST of Tan0017599 vs. ExPASy TrEMBL
Match: A0A6J1K581 (thylakoid lumenal 17.9 kDa protein, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490170 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.5e-105
Identity = 202/234 (86.32%), Postives = 209/234 (89.32%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKKKNQYHSL---------PSMAALQNSNHKPIFLSHLLSLALSIT 60
           MSSL FRP LVSPWKK  N    L         PSMAAL N NHKPIF+SHLLS ALSIT
Sbjct: 1   MSSLHFRPALVSPWKKNNNNNQFLSAVLNRTSPPSMAALPNPNHKPIFISHLLSFALSIT 60

Query: 61  LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS 120
           L+SPFPSLAIPS NSLSSPLSPTTPFSQSKD PIGLENGKIRPCPS NPSCVSTNPKSSS
Sbjct: 61  LTSPFPSLAIPSFNSLSSPLSPTTPFSQSKDFPIGLENGKIRPCPSINPSCVSTNPKSSS 120

Query: 121 FAFPLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYLEAEVDGNFGRDVIEFL 180
           FAFPLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQY+EAEVDGNFGRDVIEFL
Sbjct: 121 FAFPLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYMEAEVDGNFGRDVIEFL 180

Query: 181 VKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMKKIIDQLDWYSPTFDSMDD 226
           V+GDVAAYRIMA KVTYVYPFTTALGDSKGQEERMKKII++LDWYSPTF+SM D
Sbjct: 181 VRGDVAAYRIMAAKVTYVYPFTTALGDSKGQEERMKKIIEELDWYSPTFESMVD 234

BLAST of Tan0017599 vs. TAIR 10
Match: AT4G24930.1 (thylakoid lumenal 17.9 kDa protein, chloroplast )

HSP 1 Score: 245.7 bits (626), Expect = 3.4e-65
Identity = 131/195 (67.18%), Postives = 160/195 (82.05%), Query Frame = 0

Query: 32  NSNHKPI-FLSHLLSLALSITLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKDLPIGLENG 91
           +S   PI  L  L+S AL+I+L+S  P+LAIPSL+S S PL  TTPF+QSK +  GL NG
Sbjct: 34  SSTSPPISLLPKLISFALAISLTSFSPALAIPSLSS-SQPL--TTPFTQSKFVQTGLLNG 93

Query: 92  KIRPCPSTNPSCVSTNPKSSSFAFPLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTP 151
           KIRPCPSTNP CVSTNP SSSF+FPL+IPE+ T +PI+KL+E I+ TQ+N K  ++EDTP
Sbjct: 94  KIRPCPSTNPGCVSTNPTSSSFSFPLTIPETDTQDPIEKLKEAIMSTQKNPKFVVLEDTP 153

Query: 152 YGQYLEAEVD-GNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMKKI 211
           YG+Y+EAEV+ G F RDV+EFLVK DV AYR MATKVT+VYPFTTA GDSKGQEER+KK+
Sbjct: 154 YGRYVEAEVEGGGFSRDVMEFLVKQDVVAYRCMATKVTFVYPFTTAFGDSKGQEERLKKL 213

Query: 212 IDQLDWYSPTFDSMD 225
           IDQL WY+PTF+SM+
Sbjct: 214 IDQLGWYAPTFESME 225

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SW334.8e-6467.18Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370... [more]
Match NameE-valueIdentityDescription
XP_038893869.13.9e-11191.74thylakoid lumenal 17.9 kDa protein, chloroplastic [Benincasa hispida][more]
XP_004154123.12.4e-10888.36thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis sativus] >KGN64418.1 ... [more]
XP_008439847.14.0e-10888.84PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis melo] >KAA... [more]
KAG7012320.13.4e-10787.61Thylakoid lumenal 17.9 kDa protein, chloroplastic, partial [Cucurbita argyrosper... [more]
XP_023542750.17.6e-10787.61thylakoid lumenal 17.9 kDa protein, chloroplastic isoform X2 [Cucurbita pepo sub... [more]
Match NameE-valueIdentityDescription
A0A0A0LRK91.1e-10888.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050570 PE=4 SV=1[more]
A0A5A7UK022.0e-10888.84Thylakoid lumenal 17.9 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3AZP32.0e-10888.84thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC... [more]
A0A6J1GT701.4e-10688.03thylakoid lumenal 17.9 kDa protein, chloroplastic isoform X2 OS=Cucurbita moscha... [more]
A0A6J1K5811.5e-10586.32thylakoid lumenal 17.9 kDa protein, chloroplastic isoform X2 OS=Cucurbita maxima... [more]
Match NameE-valueIdentityDescription
AT4G24930.13.4e-6567.18thylakoid lumenal 17.9 kDa protein, chloroplast [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037734Thylakoid lumenal 17.9kDa proteinPANTHERPTHR36783THYLAKOID LUMENAL 17.9 KDA PROTEIN, CHLOROPLASTICcoord: 9..224

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0017599.1Tan0017599.1mRNA