Tan0017597 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATGACACTTAAGCTCCTTTTAGACATTTTTTTGCTACTTTGGAATTATTGCATGATATGCTCCCGGTAAACAATGTTATCCCAAGATCTCTTTATGATGTTAGGAAAATATTTAAAACATTTGATTTAGGATATCAAAAAATTCATGCATGTGTGAATGACTGTTGTTTATTTCGAAAGGAATATGAGAAGTTAGAAACATGCCCACACTGTGATTCGTCTAGATGGTTGATGGATGCTCGCACTAAACGAATTAGACAAGGTGTTCCTACTAAAGTCTTAAGATACTTTCCTATCATATCAAGGTTGAAACGAATGTTTAATACTTACGAAGTTGCTGAAAACTTACTATGGCATTCAAACCCTAAGAGCAACGATGGCAAAATGCATCATCTTGTTGATTCAGTAGCATGGAAATTAATCAACATGAAATGGCCTGATTTTTCTATGGACCCGCGTAATTTAAAGTTTGGGTTGCTACAGATTGTTTTAACCCATTTTCTAACTTAAGTAGTAGTTACAACTGTTGGCCAGTAATGCTTGTTACATAATGTTGTCGTTGCTAATTCCAGGTCCCAAGCAACCTGGTAATGATATTGATATTTTTTTGCAACCTCTTATTGAAGATTTTCAAGAATTGTGGAAAGGAGTATCATGTTATGATATAGTTTCCAGAACGTCTTTTAATTTAAGAGCAATTCTCATGTGGACTATAAATGATTTTCCAGCATATGGAAACCTTGTTGGGTGCACCACGAAAGGAAAGACTGCATGTCCTATATGTGGAGATGAAACCCATGCAATTTGGTTAAAAAATAGTAGAAAATTTTCATACATGGGTCATCGACGATTTCTACCATCTTCTCATTCACTTAGACGAAAGAAGACATGGTTTGATGGAAAAGTAGAAGAGGGATTATAACCTAAGTTGATGAGTGGACATAAGCTTTATCTTCATCTTACAAAGTTTGAAAATCGTTGGGGAAAATGTAATAAAAGGAAGAGGCAAGTAAAAGTGAAAGATATGTGGAAGAAGCCATCAATCTTCTTTGACTTGCCATATTGGAAGGTAACTTCTTTGTGCTCTATTTTGTCTTTAGGGTTATGGAGCAAATAAACTTTTATTTGACTAACTATTTATCCTTTTTTTTTTATCTTGACCTAGGATCTAGTGTTACGCCACAATATTGATGTCATGCATGTTGAAAAGAACGTCTGTGAGAGCATTGTGGGAACTTTATTGAGCATTGAAAAGAAATCTAAAGATGGAGTTAATGCACGAAAAGATTTAGAGTTAATGGGTATAAGAGCCGATTTACATCCAGAACAGAGAGAGAATCAAATATACCTTCTTGCAGCCCCGTGTACACTATCTAGATCAGAGAAAAATGTTTTTTTGTAAAAGATTGTACAACTTAAAGTTACCTGATGGTTATAGTTCTAATATTTCAAAGTGCATATCTCTTGACGACTCAAAAATCATAGGG AAATGACACTTAAGCTCCTTTTAGACATTTTTTTGCTACTTTGGAATTATTGCATGATATGCTCCCGGTAAACAATGTTATCCCAAGATCTCTTTATGATGTTAGGAAAATATTTAAAACATTTGATTTAGGATATCAAAAAATTCATGCATGTGTGAATGACTGTTGTTTATTTCGAAAGGAATATGAGAAGTTAGAAACATGCCCACACTGTGATTCGTCTAGATGGTTGATGGATGCTCGCACTAAACGAATTAGACAAGGTGTTCCTACTAAAGTCTTAAGATACTTTCCTATCATATCAAGGTTGAAACGAATGTTTAATACTTACGAAGTTGCTGAAAACTTACTATGGCATTCAAACCCTAAGAGCAACGATGGCAAAATGCATCATCTTGTTGATTCAGTAGCATGGAAATTAATCAACATGAAATGGCCTGATTTTTCTATGGACCCGCGTAATTTAAAGTTTGGGTTGCTACAGATTGTTTTAACCCATTTTCTAACTTAAGTAGTAGTTACAACTGTTGGCCAGTAATGCTTGTTACATAATGTTGTCGTTGCTAATTCCAGGTCCCAAGCAACCTGGTAATGATATTGATATTTTTTTGCAACCTCTTATTGAAGATTTTCAAGAATTGTGGAAAGGAGTATCATGTTATGATATAGTTTCCAGAACGTCTTTTAATTTAAGAGCAATTCTCATGTGGACTATAAATGATTTTCCAGCATATGGAAACCTTGTTGGGTGCACCACGAAAGGAAAGACTGCATGTCCTATATGTGGAGATGAAACCCATGCAATTTGGTTAAAAAATAGTAGAAAATTTTCATACATGGGTCATCGACGATTTCTACCATCTTCTCATTCACTTAGACGAAAGAAGACATGGTTTGATGGAAAAGTAGAAGAGGGATTATAACCTAAGTTGATGAGTGGACATAAGCTTTATCTTCATCTTACAAAGTTTGAAAATCGTTGGGGAAAATGTAATAAAAGGAAGAGGCAAGTAAAAGTGAAAGATATGTGGAAGAAGCCATCAATCTTCTTTGACTTGCCATATTGGAAGGATCTAGTGTTACGCCACAATATTGATGTCATGCATGTTGAAAAGAACGTCTGTGAGAGCATTGTGGGAACTTTATTGAGCATTGAAAAGAAATCTAAAGATGGAGTTAATGCACGAAAAGATTTAGAGTTAATGGGTATAAGAGCCGATTTACATCCAGAACAGAGAGAGAATCAAATATACCTTCTTGCAGCCCCGTGTACACTATCTAGATCAGAGAAAAATGTTTTTTTGTAAAAGATTGTACAACTTAAAGTTACCTGATGGTTATAGTTCTAATATTTCAAAGTGCATATCTCTTGACGACTCAAAAATCATAGGG ATGCTCCCGGTAAACAATGTTATCCCAAGATCTCTTTATGATGTTAGGAAAATATTTAAAACATTTGATTTAGGATATCAAAAAATTCATGCATGTGTGAATGACTGTTGTTTATTTCGAAAGGAATATGAGAAGTTAGAAACATGCCCACACTGTGATTCGTCTAGATGGTTGATGGATGCTCGCACTAAACGAATTAGACAAGGTGTTCCTACTAAAGTCTTAAGATACTTTCCTATCATATCAAGGTTGAAACGAATGTTTAATACTTACGAAGTTGCTGAAAACTTACTATGGCATTCAAACCCTAAGAGCAACGATGGCAAAATGCATCATCTTGTTGATTCAGTAGCATGGAAATTAATCAACATGAAATGGCCTGATTTTTCTATGGACCCGCGTAATTTAAAGTTTGGGTTGCTACAGATTGTTTTAACCCATTTTCTAACTTAA MLPVNNVIPRSLYDVRKIFKTFDLGYQKIHACVNDCCLFRKEYEKLETCPHCDSSRWLMDARTKRIRQGVPTKVLRYFPIISRLKRMFNTYEVAENLLWHSNPKSNDGKMHHLVDSVAWKLINMKWPDFSMDPRNLKFGLLQIVLTHFLT Homology
BLAST of Tan0017597 vs. NCBI nr
Match: TYK08453.1 (uncharacterized protein E5676_scaffold654G00690 [Cucumis melo var. makuwa]) HSP 1 Score: 224.2 bits (570), Expect = 7.7e-55 Identity = 100/140 (71.43%), Postives = 117/140 (83.57%), Query Frame = 0
BLAST of Tan0017597 vs. NCBI nr
Match: TYK24342.1 (uncharacterized protein E5676_scaffold205G001200 [Cucumis melo var. makuwa]) HSP 1 Score: 224.2 bits (570), Expect = 7.7e-55 Identity = 100/140 (71.43%), Postives = 117/140 (83.57%), Query Frame = 0
BLAST of Tan0017597 vs. NCBI nr
Match: KAA0041270.1 (putative TNP2-like transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 222.2 bits (565), Expect = 2.9e-54 Identity = 98/140 (70.00%), Postives = 115/140 (82.14%), Query Frame = 0
BLAST of Tan0017597 vs. NCBI nr
Match: KAA0032202.1 (uncharacterized protein E6C27_scaffold219G00130 [Cucumis melo var. makuwa]) HSP 1 Score: 215.3 bits (547), Expect = 3.6e-52 Identity = 95/140 (67.86%), Postives = 113/140 (80.71%), Query Frame = 0
BLAST of Tan0017597 vs. NCBI nr
Match: XP_040371989.1 (uncharacterized protein LOC112192328 isoform X1 [Rosa chinensis] >XP_040371990.1 uncharacterized protein LOC112192328 isoform X1 [Rosa chinensis] >XP_040371991.1 uncharacterized protein LOC112192328 isoform X1 [Rosa chinensis]) HSP 1 Score: 204.5 bits (519), Expect = 6.3e-49 Identity = 88/140 (62.86%), Postives = 110/140 (78.57%), Query Frame = 0
BLAST of Tan0017597 vs. ExPASy TrEMBL
Match: A0A5D3DLF1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001200 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 3.7e-55 Identity = 100/140 (71.43%), Postives = 117/140 (83.57%), Query Frame = 0
BLAST of Tan0017597 vs. ExPASy TrEMBL
Match: A0A5D3C984 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00690 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 3.7e-55 Identity = 100/140 (71.43%), Postives = 117/140 (83.57%), Query Frame = 0
BLAST of Tan0017597 vs. ExPASy TrEMBL
Match: A0A5A7TD89 (Putative TNP2-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002560 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.4e-54 Identity = 98/140 (70.00%), Postives = 115/140 (82.14%), Query Frame = 0
BLAST of Tan0017597 vs. ExPASy TrEMBL
Match: A0A5A7SME3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00130 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.7e-52 Identity = 95/140 (67.86%), Postives = 113/140 (80.71%), Query Frame = 0
BLAST of Tan0017597 vs. ExPASy TrEMBL
Match: A0A2N9FV28 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22368 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 5.2e-49 Identity = 90/140 (64.29%), Postives = 106/140 (75.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|