Tan0017564 (gene) Snake gourd v1

Overview


Name	Tan0017564
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gibberellin regulated protein
Location	LG11: 863623 .. 865822 (-)
RNA-Seq Expression	Tan0017564
Synteny	Tan0017564

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACATATCTTCTTCAGAAATGAAGCCACTCATTCTTCTTTGCATTTTCATTCTCCTTCTCCTTCTCATGGAGGTGTTATTTATATTATATATATAGGGTTTTCCATTTTATTTTTTTTCTAGCTAGTAAAACTAATTAACAAAGTTCGTATAATTAATGTTTTTTATTTCTATATTTTGTTGCAGGGTTTTTCAGACGCTTCCTCATCTTTTACTACTGTGAGAGTTCTTCATCTCTCTCTAGTTTTCTTTACCCATCCCATATATATAGCCTTCAAGTTTTGAAATTCAATGTTATGATAATAAATTTGGATGGAAATTTTGAGATAGGAAGGAATATTAGCTAATATTGTTGAAAATAACCGTCTTAACAACTATGACTTATTCTAGTCTCTAATAGCTAAAGTGATTTTGATCTAGTAATAATGTAACACGGTATCATGAGTATCGAAATACGAGATAGTGAGTTACATATAAGAGAAGTGTTGAGCATATGTTGAAGAGATTGTTTTGACGATCGTAGTGTCAACAAACTAAGAGTTAAAGAAAGTTTGAGTTTGTGTAGCCTCTATTTACACGGTGTAAAGTTATGAATTCTAAGTAATATTTGTGGAATGAATTTGTATTTTATAAAAGGAAATATAATACCTAGATTATAGAATTTTGGGTTTATATATAGTATATATAATCAACAAATGTCTCCACAATCCAGACTTTAGAAAGGAATCAAACATCATCCTAAATTATTTGAAAAACTTGAAAGACCAAAAAAATTGGTGTAAATATTTATAACAAATCTACATACATTGGGGTTGGATTCAGGTGAATGAAGGGACCATCACGGTATCTCTCAGCAAAAAACATCACTATCTTCCAAAAATCAGTAAGTTGCCATGTAATCTAATAACATAGCTTAAATTACAAGTTTAGTCTCTAAAGTATCATTTGATAATTATTTATTTTTTGGAAATTTTACTTGTTTTCCTACCATTTTTTTATTTTGGTTGTCATCTTCTCTACAATAATTGTCGTCTTTTTTATGAAATTATTTTAAGTTATTAGACAAACTCCAAAAACAAACACACAAGTTTTTTAAAACTATTTTTTTTTTTTAGTTTTCAAAACTTGACTTAGTTTTTAAAAACATGCATTGAGAGTAAATAACAAAACAAAGAAAGTCATATATAGAAGTAGTATTGTTTATAAATTTAATTTTCAAAAACAAAAAATCAAATGATTATCAAATGAGACCTGAATTTTCATATTTGTATTTAATAAGTTATTAAACTTGAAAAACATCAAATAAGTTACTAAACTTTCAATTTTGTGTCTAATAAGTGTTGACATTCAATATTCTTTAAAATAAACGAATCTATTAGACATAAAATTGAATTTTGTATGTAATGTAATAGAGCATTAAACTTTCAATCATATGTCAAATAAGTTAATGAATTTCAAACAATATCAAATAGGTCAATAACTTATTAGACATAAAATTGAAAGTTTATGGATTTGTCAGAGACAAATTTATTAGTGACTTTTTAAAGTTTAACCTAAAATTACACCAACTAAACTTGTAATTTAATTTTTTTAACATGAAATTGAAGAAATAAAGTAAAAAGGAAAAAAAAAAGTGAGTAATGGTTGAATTGGATTAGATTGCAAATATGCATGCTCAAGGCGATGCAGCAGAGTGTCAAGAAAGAAGATATGCATGCGCGCTTGTGGAACTTGCTGCAGCCGATGCCACTGCGTCCCGCCCGGCACTTACGGCAACCACCAAGTTTGCCCTTGCTATGCTCGCCTCAAGACCCACGGCAATAAGCCTAAGTGCCCCTAAATTCAGAGACACTGTCCATAATTAACGTTTTACTCTTGTTTTATACCATTTTCATTTATATTTGGAGGTGGTTTTATAGTATTTTCATTCATATCTAGACACTTTAAATACTAATAATCTGGTTAAATATAAAAATCAGTGGCTTGTGTTCCTTATTATTTGAATAAAAATCACTGCTTTGTTTTTTATAAATGCATGTCATATCCCCTTTTTTTTTTTCGTATTTCATATTATAAGTTTGTGTATGTTCATAATGGTGGTGAATGATTTGTCGCATATAATAAGTTTATGTTGGCGGTCATGCTACATGTAATAAGTATAAACTTTTCTTTGTTGAGATATCAATAGCAATAGTTAATTC

mRNA sequence

GACATATCTTCTTCAGAAATGAAGCCACTCATTCTTCTTTGCATTTTCATTCTCCTTCTCCTTCTCATGGAGGGTTTTTCAGACGCTTCCTCATCTTTTACTACTGTGAATGAAGGGACCATCACGGTATCTCTCAGCAAAAAACATCACTATCTTCCAAAAATCAATTGCAAATATGCATGCTCAAGGCGATGCAGCAGAGTGTCAAGAAAGAAGATATGCATGCGCGCTTGTGGAACTTGCTGCAGCCGATGCCACTGCGTCCCGCCCGGCACTTACGGCAACCACCAAGTTTGCCCTTGCTATGCTCGCCTCAAGACCCACGGCAATAAGCCTAAGTGCCCCTAAATTCAGAGACACTGTCCATAATTAACGTTTTACTCTTGTTTTATACCATTTTCATTTATATTTGGAGGTGGTTTTATAGTATTTTCATTCATATCTAGACACTTTAAATACTAATAATCTGGTTAAATATAAAAATCAGTGGCTTGTGTTCCTTATTATTTGAATAAAAATCACTGCTTTGTTTTTTATAAATGCATGTCATATCCCCTTTTTTTTTTTCGTATTTCATATTATAAGTTTGTGTATGTTCATAATGGTGGTGAATGATTTGTCGCATATAATAAGTTTATGTTGGCGGTCATGCTACATGTAATAAGTATAAACTTTTCTTTGTTGAGATATCAATAGCAATAGTTAATTC

Coding sequence (CDS)

ATGAAGCCACTCATTCTTCTTTGCATTTTCATTCTCCTTCTCCTTCTCATGGAGGGTTTTTCAGACGCTTCCTCATCTTTTACTACTGTGAATGAAGGGACCATCACGGTATCTCTCAGCAAAAAACATCACTATCTTCCAAAAATCAATTGCAAATATGCATGCTCAAGGCGATGCAGCAGAGTGTCAAGAAAGAAGATATGCATGCGCGCTTGTGGAACTTGCTGCAGCCGATGCCACTGCGTCCCGCCCGGCACTTACGGCAACCACCAAGTTTGCCCTTGCTATGCTCGCCTCAAGACCCACGGCAATAAGCCTAAGTGCCCCTAA

Protein sequence

MKPLILLCIFILLLLLMEGFSDASSSFTTVNEGTITVSLSKKHHYLPKINCKYACSRRCSRVSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPKCP

Homology

[Close]

BLAST of Tan0017564 vs. ExPASy Swiss-Prot
Match: Q8GWK5 (Gibberellin-regulated protein 9 OS=Arabidopsis thaliana OX=3702 GN=GASA9 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-25
Identity = 54/108 (50.00%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 6   LLCIFILLLLLMEGFSDAS----SSFTTVNEGTITVSLSKKHHYLPKINCKYACSRRCSR 65
           L+  F+LL  ++   S +S    SS +  N+   T +  + +H+ P+INC +AC+RRCS+
Sbjct: 12  LIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRCSK 71

Query: 66  VSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPKCP 110
            SRKK+C RACG+CC++C CVPPGT GN   CPCYA ++THGNK KCP
Sbjct: 72  TSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Tan0017564 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.0e-19
Identity = 50/104 (48.08%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 6   LLCIFILLLLLMEGFSDASSSFTTVNEGTITVSLSKKHHYLPKINCKYACSRRCSRVSRK 65
           L    +L LLL+E      +   T N      ++S+  +   KI+C  AC+ RC   SR 
Sbjct: 7   LFASLLLSLLLLEQVQSIQTDQVTSN------AISEAAYSYKKIDCGGACAARCRLSSRP 66

Query: 66  KICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPKCP 110
           ++C RACGTCC+RC+CVPPGT GN + CPCYA L THGNK KCP
Sbjct: 67  RLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104

[Close]

BLAST of Tan0017564 vs. ExPASy Swiss-Prot
Match: P46689 (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 5.1e-19
Identity = 41/69 (59.42%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 41  KKHHYLPKINCKYACSRRCSRVSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLK 100
           KK+ Y  KI+C  AC  RC    R ++C RACGTCC RC+CVPPGTYGN+  C CYA L 
Sbjct: 30  KKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLT 89

Query: 101 THGNKPKCP 110
           THG + KCP
Sbjct: 90  THGGRRKCP 98

[Close]

BLAST of Tan0017564 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.3e-18
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 48  KINCKYACSRRCSRVSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPK 107
           KI+C   C  RCS+ SR K+C+RAC +CCSRC+CVPPGT GN  +CPCYA + THG + K
Sbjct: 38  KIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLK 97

Query: 108 CP 110
           CP
Sbjct: 98  CP 99

[Close]

BLAST of Tan0017564 vs. ExPASy Swiss-Prot
Match: F4IQJ4 (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.7e-18
Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 47  PKINCKYACSRRCSRVSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKP 106
           PKI+C   C  RCS  SR  +C RACGTCC+RC+CV PGT GN+  CPCY  L THG + 
Sbjct: 32  PKIDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRR 91

Query: 107 KCP 110
           KCP
Sbjct: 92  KCP 94

[Close]

BLAST of Tan0017564 vs. NCBI nr
Match: XP_038885058.1 (gibberellin-regulated protein 9-like [Benincasa hispida])

HSP 1 Score: 187.2 bits (474), Expect = 7.6e-44
Identity = 88/109 (80.73%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 1   MKPLILLCIFILLLLLMEGFSDASSSFTTVNEGTITVSLSKKHHYLPKINCKYACSRRCS 60
           MKPL LLCIFI+L +L++GFS+A   FTTV+EGT TV+L+KK+HY PKINCK  CSRRCS
Sbjct: 1   MKPLSLLCIFIILSILLQGFSEA---FTTVDEGTNTVALTKKYHYHPKINCKRECSRRCS 60

Query: 61  RVSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPKCP 110
           +V RKKICMRACGTCCSRCHCVPPGTYGNHQ CPCYARLKTHGNKPKCP
Sbjct: 61  KVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLKTHGNKPKCP 106

[Close]

BLAST of Tan0017564 vs. NCBI nr
Match: XP_008441216.1 (PREDICTED: gibberellin-regulated protein 9 [Cucumis melo])

HSP 1 Score: 182.2 bits (461), Expect = 2.4e-42
Identity = 86/109 (78.90%), Postives = 95/109 (87.16%), Query Frame = 0


Query: 1   MKPLILLCIFILLLLLMEGFSDASSSFTTVNEGTITVSLSKKHHYLPKINCKYACSRRCS 60
           MKPL LLCIFI+L  L++GFS+A    TTV+ GT TV+LSKK+HY PKINCK  CSRRCS
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEA---ITTVDAGTNTVALSKKYHYQPKINCKSECSRRCS 60

Query: 61  RVSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPKCP 110
           +V RKKICMRACGTCCSRCHCVPPGTYGNHQ CPCYARL+THGNKPKCP
Sbjct: 61  KVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Tan0017564 vs. NCBI nr
Match: XP_004138815.1 (gibberellin-regulated protein 9 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 4.1e-42
Identity = 85/109 (77.98%), Postives = 95/109 (87.16%), Query Frame = 0


Query: 1   MKPLILLCIFILLLLLMEGFSDASSSFTTVNEGTITVSLSKKHHYLPKINCKYACSRRCS 60
           MKPL LLCIFI+L  L++GFS+A     TV+EGT TV+L+KK+HY PKINCK  CSRRCS
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEA---IATVDEGTNTVALTKKYHYQPKINCKSECSRRCS 60

Query: 61  RVSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPKCP 110
           +V RKKICMRACGTCCSRCHCVPPGTYGNHQ CPCYARL+THGNKPKCP
Sbjct: 61  KVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Tan0017564 vs. NCBI nr
Match: XP_022993114.1 (gibberellin-regulated protein 9-like [Cucurbita maxima])

HSP 1 Score: 177.2 bits (448), Expect = 7.8e-41
Identity = 83/109 (76.15%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 1   MKPLILLCIFILLLLLMEGFSDASSSFTTVNEGTITVSLSKKHHYLPKINCKYACSRRCS 60
           MKPL +LC F+LLLL ++G S+AS   T VNEGT T +L KKH Y PKINCKYACSRRC 
Sbjct: 21  MKPLSVLCTFVLLLLFLQGLSEAS---TNVNEGTNTAALDKKHIYSPKINCKYACSRRCM 80

Query: 61  RVSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPKCP 110
           +V RKKICMRACG+CCSRCHCVPPGTYGNHQ CPCYARL+THGNK KCP
Sbjct: 81  KVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNKLKCP 126

[Close]

BLAST of Tan0017564 vs. NCBI nr
Match: XP_023550961.1 (gibberellin-regulated protein 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.8 bits (447), Expect = 1.0e-40
Identity = 82/109 (75.23%), Postives = 93/109 (85.32%), Query Frame = 0


Query: 1   MKPLILLCIFILLLLLMEGFSDASSSFTTVNEGTITVSLSKKHHYLPKINCKYACSRRCS 60
           MKPL +LC F+LLLL ++G S+A   FT VNEGT T +L+KKH Y PKINCKYACSRRC 
Sbjct: 21  MKPLSVLCTFVLLLLFLQGLSEA---FTNVNEGTNTTALNKKHIYSPKINCKYACSRRCM 80

Query: 61  RVSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPKCP 110
           +V RKKICMRACG+CCSRCHCVPPGTYGNHQ CPCYARL+THGN+ KCP
Sbjct: 81  KVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 126

[Close]

BLAST of Tan0017564 vs. ExPASy TrEMBL
Match: A0A1S3B2G6 (gibberellin-regulated protein 9 OS=Cucumis melo OX=3656 GN=LOC103485417 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.2e-42
Identity = 86/109 (78.90%), Postives = 95/109 (87.16%), Query Frame = 0


Query: 1   MKPLILLCIFILLLLLMEGFSDASSSFTTVNEGTITVSLSKKHHYLPKINCKYACSRRCS 60
           MKPL LLCIFI+L  L++GFS+A    TTV+ GT TV+LSKK+HY PKINCK  CSRRCS
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEA---ITTVDAGTNTVALSKKYHYQPKINCKSECSRRCS 60

Query: 61  RVSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPKCP 110
           +V RKKICMRACGTCCSRCHCVPPGTYGNHQ CPCYARL+THGNKPKCP
Sbjct: 61  KVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Tan0017564 vs. ExPASy TrEMBL
Match: A0A0A0LMS4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402110 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.0e-42
Identity = 85/109 (77.98%), Postives = 95/109 (87.16%), Query Frame = 0


Query: 1   MKPLILLCIFILLLLLMEGFSDASSSFTTVNEGTITVSLSKKHHYLPKINCKYACSRRCS 60
           MKPL LLCIFI+L  L++GFS+A     TV+EGT TV+L+KK+HY PKINCK  CSRRCS
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEA---IATVDEGTNTVALTKKYHYQPKINCKSECSRRCS 60

Query: 61  RVSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPKCP 110
           +V RKKICMRACGTCCSRCHCVPPGTYGNHQ CPCYARL+THGNKPKCP
Sbjct: 61  KVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Tan0017564 vs. ExPASy TrEMBL
Match: A0A6J1JZB3 (gibberellin-regulated protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111489231 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.8e-41
Identity = 83/109 (76.15%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 1   MKPLILLCIFILLLLLMEGFSDASSSFTTVNEGTITVSLSKKHHYLPKINCKYACSRRCS 60
           MKPL +LC F+LLLL ++G S+AS   T VNEGT T +L KKH Y PKINCKYACSRRC 
Sbjct: 21  MKPLSVLCTFVLLLLFLQGLSEAS---TNVNEGTNTAALDKKHIYSPKINCKYACSRRCM 80

Query: 61  RVSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPKCP 110
           +V RKKICMRACG+CCSRCHCVPPGTYGNHQ CPCYARL+THGNK KCP
Sbjct: 81  KVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNKLKCP 126

[Close]

BLAST of Tan0017564 vs. ExPASy TrEMBL
Match: A0A6J1FFC2 (gibberellin-regulated protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111444936 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.5e-41
Identity = 82/109 (75.23%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 1   MKPLILLCIFILLLLLMEGFSDASSSFTTVNEGTITVSLSKKHHYLPKINCKYACSRRCS 60
           MKPL +LC F+LLLL ++G S+A   FT VNEGT T +L KKH Y PKINCKYACSRRC 
Sbjct: 1   MKPLSVLCTFVLLLLFLQGLSEA---FTNVNEGTNTAALDKKHIYSPKINCKYACSRRCM 60

Query: 61  RVSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPKCP 110
           +V RKKICMRACG+CCSRCHCVPPGTYGNHQ CPCYARL+THGN+ KCP
Sbjct: 61  KVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106

[Close]

BLAST of Tan0017564 vs. ExPASy TrEMBL
Match: A0A6J1DG94 (gibberellin-regulated protein 9 OS=Momordica charantia OX=3673 GN=LOC111020228 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 5.5e-40
Identity = 78/109 (71.56%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 1   MKPLILLCIFILLLLLMEGFSDASSSFTTVNEGTITVSLSKKHHYLPKINCKYACSRRCS 60
           MKP+  L I +LLL L++  S+AS S++TVN+G+  V++ KKH   PKINCKYACSRRC 
Sbjct: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60

Query: 61  RVSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPKCP 110
           + SRKKICMRACG+CCSRCHCVPPGTYGNHQ+CPCYARLKTH NKPKCP
Sbjct: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 109

[Close]

BLAST of Tan0017564 vs. TAIR 10
Match: AT1G22690.1 (Gibberellin-regulated family protein )

HSP 1 Score: 117.1 bits (292), Expect = 8.9e-27
Identity = 54/108 (50.00%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 6   LLCIFILLLLLMEGFSDAS----SSFTTVNEGTITVSLSKKHHYLPKINCKYACSRRCSR 65
           L+  F+LL  ++   S +S    SS +  N+   T +  + +H+ P+INC +AC+RRCS+
Sbjct: 12  LIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRCSK 71

Query: 66  VSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPKCP 110
            SRKK+C RACG+CC++C CVPPGT GN   CPCYA ++THGNK KCP
Sbjct: 72  TSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Tan0017564 vs. TAIR 10
Match: AT1G22690.2 (Gibberellin-regulated family protein )

HSP 1 Score: 117.1 bits (292), Expect = 8.9e-27
Identity = 54/108 (50.00%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 6   LLCIFILLLLLMEGFSDAS----SSFTTVNEGTITVSLSKKHHYLPKINCKYACSRRCSR 65
           L+  F+LL  ++   S +S    SS +  N+   T +  + +H+ P+INC +AC+RRCS+
Sbjct: 12  LIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRCSK 71

Query: 66  VSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPKCP 110
            SRKK+C RACG+CC++C CVPPGT GN   CPCYA ++THGNK KCP
Sbjct: 72  TSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Tan0017564 vs. TAIR 10
Match: AT1G22690.3 (Gibberellin-regulated family protein )

HSP 1 Score: 117.1 bits (292), Expect = 8.9e-27
Identity = 54/108 (50.00%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 6   LLCIFILLLLLMEGFSDAS----SSFTTVNEGTITVSLSKKHHYLPKINCKYACSRRCSR 65
           L+  F+LL  ++   S +S    SS +  N+   T +  + +H+ P+INC +AC+RRCS+
Sbjct: 12  LIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRCSK 71

Query: 66  VSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLKTHGNKPKCP 110
            SRKK+C RACG+CC++C CVPPGT GN   CPCYA ++THGNK KCP
Sbjct: 72  TSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Tan0017564 vs. TAIR 10
Match: AT1G75750.1 (GAST1 protein homolog 1 )

HSP 1 Score: 95.1 bits (235), Expect = 3.6e-20
Identity = 41/69 (59.42%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 41  KKHHYLPKINCKYACSRRCSRVSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLK 100
           KK+ Y  KI+C  AC  RC    R ++C RACGTCC RC+CVPPGTYGN+  C CYA L 
Sbjct: 30  KKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLT 89

Query: 101 THGNKPKCP 110
           THG + KCP
Sbjct: 90  THGGRRKCP 98

[Close]

BLAST of Tan0017564 vs. TAIR 10
Match: AT1G75750.2 (GAST1 protein homolog 1 )

HSP 1 Score: 95.1 bits (235), Expect = 3.6e-20
Identity = 41/69 (59.42%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 41  KKHHYLPKINCKYACSRRCSRVSRKKICMRACGTCCSRCHCVPPGTYGNHQVCPCYARLK 100
           KK+ Y  KI+C  AC  RC    R ++C RACGTCC RC+CVPPGTYGN+  C CYA L 
Sbjct: 29  KKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLT 88

Query: 101 THGNKPKCP 110
           THG + KCP
Sbjct: 89  THGGRRKCP 97

The following BLAST results are available for this feature:

BLAST of Tan0017564 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWK5	1.3e-25	50.00	Gibberellin-regulated protein 9 OS=Arabidopsis thaliana OX=3702 GN=GASA9 PE=3 SV...	[more]
Q93X17	1.0e-19	48.08	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
P46689	5.1e-19	59.42	Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV...	[more]
P46688	3.3e-18	61.29	Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV...	[more]
F4IQJ4	5.7e-18	60.32	Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 ...	[more]

BLAST of Tan0017564 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885058.1	7.6e-44	80.73	gibberellin-regulated protein 9-like [Benincasa hispida]	[more]
XP_008441216.1	2.4e-42	78.90	PREDICTED: gibberellin-regulated protein 9 [Cucumis melo]	[more]
XP_004138815.1	4.1e-42	77.98	gibberellin-regulated protein 9 [Cucumis sativus]	[more]
XP_022993114.1	7.8e-41	76.15	gibberellin-regulated protein 9-like [Cucurbita maxima]	[more]
XP_023550961.1	1.0e-40	75.23	gibberellin-regulated protein 9-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0017564 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B2G6	1.2e-42	78.90	gibberellin-regulated protein 9 OS=Cucumis melo OX=3656 GN=LOC103485417 PE=3 SV=...	[more]
A0A0A0LMS4	2.0e-42	77.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402110 PE=3 SV=1	[more]
A0A6J1JZB3	3.8e-41	76.15	gibberellin-regulated protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111489231...	[more]
A0A6J1FFC2	6.5e-41	75.23	gibberellin-regulated protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111444936 PE...	[more]
A0A6J1DG94	5.5e-40	71.56	gibberellin-regulated protein 9 OS=Momordica charantia OX=3673 GN=LOC111020228 P...	[more]

BLAST of Tan0017564 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22690.1	8.9e-27	50.00	Gibberellin-regulated family protein	[more]
AT1G22690.2	8.9e-27	50.00	Gibberellin-regulated family protein	[more]
AT1G22690.3	8.9e-27	50.00	Gibberellin-regulated family protein	[more]
AT1G75750.1	3.6e-20	59.42	GAST1 protein homolog 1	[more]
AT1G75750.2	3.6e-20	59.42	GAST1 protein homolog 1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 50..109 e-value: 4.9E-22 score: 77.8
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 21..109
None	No IPR available	PANTHER	PTHR23201:SF20	GIBBERELLIN-REGULATED PROTEIN 9	coord: 21..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0017564.1	Tan0017564.1	mRNA