Tan0017535 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATGAGCTGAGGCTCCCATGTCCCGCCGACCCTTCGAAAAAGTCAGGTCGTCAAACGGCTCATAGGGAGTCAGAAGCAAGCGGAGTCAAAGGCGGGTCAAACTCACATAAGCGGAGGGGGAGACACATTCATGAAAAGCGAGAAGCCGTGGGGGACTGGCCAACTATGAATAGATATCTGACTTTCGGGTAAGAGTATGAACATCTATTAGTCCGTATCATGGGTCTACTTGTTACAAAAGGCGAACATCCCTATTCCAAAACATACACATAAGTCCTCAGGCAGGCGGGGACGAAAAGAGTCTATTTCTTTACAATATTCCGGAATGTATCATGGCCCTATCTATTCATCTTTTTATTAAAAAAAAAAAAGAGTTCCGCATCTCTCCGAGGCCGGGAGAACAAATAGGCGTGAGGAAGCCCTCGCTCCAACGAGCCCTCTCCCGTTGCTGTTCCCGGATCACCCATCCCTTCCTTCCCCTTCGCCCGGCCTGGTGAGATCCGATGAGATCAGATCTCTCGAACGAAGTTCAGTGATAGGAAGAGAAGACAGCTGGCGGGAGATCTCTATTCATTACACCCCCTTGTATAGGTTGGGGAAAACGGAAGTGCGCTCCTGCGCACCAGCTGAAGGAAGGATCTTTGGCATAAAGATACCTTCTTATTAGAGAAAGGGGCAAGCCAAAACCAACTCCTAAAAAGTGGCTGGATCGAAGTATCTCGAACATTCTCCATCCGCCCGCCAGCTGCAGAGGGGGTTCGATTCCCGTTATACGCGATGTGGCGAAAAAGACGGATTCAACAAGATATGCCTTGCCTGCATTAAGATTTCAAACTTGTCGTCTACTTTTAGGAAATGTTCGGAACAGAGAACTTACAATAATACAACGCCGCATTCTCCGAAAATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCCGAGAGAAAATCTTAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCCTTTTTCATGGGGATTTACCCATCACAGAGATGCACAGAGGAACAGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTGAAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTAAGCATTACTCATTTTAAAGTGTCCCACGGTGATCTAATATCTTTTCAAGAAAATGACGCGAGAATCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATAGGAAAATTCCTGGATCACCCGGTAAGAATGTGGAGAAGAACTAAAACGGAATGGTTCCACCTACTCAAAACTCAGAGGGGATGCCGCCTACTACTAAAATCCCGGTTTTTGCAACAGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAACAGAATGAAGAGGAATTTGTATCATTTTAAATCCCTATTCTTATCGAATAGAAGGAACGAGAAAAACCGAAATCTTCCTACTCGAACAATCAGTCCTATAGTTTACAACTCTTCTTTATATAGTAATTCGACCTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGCAAAATCAAAAGGATCGAACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGCTGTGGTATCTTATGGACCTAACATAGGTCACATCCCTCACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCGGAGCGGAAACGGACGTGGCCAAAACATCTAAAGATCGGCGTAGTCGCTCATAGGGACATATCTATCCGTCTCGAGTCTCGTCTAGATCGATTCATAGATCGATTTCTATCCATATGTATCGGTATCTCCGTGGATAGAGATAAAGATAGGCCTGCTTTAGTAGGTGATTCACTATTTCCATTTTTTTGATTGATTGCCTTCCCCTCGTTGACTCGGTCAAGTGGCTTCGCTCCTTTTTTTTGACAACAAGTTTGAAATCTTAATGCAGGCAAGGAAAGAGAGTTTTTCTATTATTACTTGCAGGATCGGAGCGTAGACGAGCGAGCAGAGCCCAGGGAACGGGGAAGCCCGTCATAGAGCAGTCGACTAGAAGTAGAAGACTGCTGGCCTGAGAGAAGACGGCCTCTCTCGGGAAACATGGCCTAATTTCTCTTCTTTCTTTTTGATTTCGGGTTTCTTTCTTTTTTCAGGGGCCCAGAACGCTTAAAGGTGGGGGAGAAGCAAGCCGAACCTCTGATCGACCTGGAAACATCACAAATTCTCGGCGTCGAGAGAGATTTGAGATTCCGTAAGTAACTCAGCGAGTGCTTTCTAAGAGGGGCTTGACTTGGAAGAAGAAAATGAAATACGAACAACCGCGCTGGTCGTAATAGATCGACTTTCATGCTAGTTCTTGCTCCAGCATGAAAGTTCCATTTCAGGGAAGGACGACGTACCATGATACTTTCTGTTTTGTCGAGCCCAGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCTAAAAATCCGGTACATTCCGTTTTGTTTCCCATCCCAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTCATATAGGAGCTATAGCCGTTTCATTCCTATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAGATTCACGAAGAAGTCTTGCGCTATTTACCAGTGAGTGGTATTATTGGACTGATCTTTTGGTGGGAAATGTTCTTCATTTTAGATAATGAAACCATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTTAGATATACGGTTTATGCCGGAAAGGTACGAAGTTGGACTAATTTGGAAACATTGGGCAATTTACTTTATACCTACTATTCCGTCTGGTTTTTGGTTTCTAGTCTGATTTTATTAGTAGCCATGATTGGGGCTATAGTACTGACTATGCATAGGACTACTAAGGTGAAAAGACAGGATGTATTCCGACGAAATGCTATTGATTTTAGGAGGACTATAATGAGGAGGACGACAGACCCACTCACGATCTACTAAAGGGCAAGTAGCTTGATTGGTTCGAATCCAAGTCGTGAGATGGCAGTGACGGTGAGGAAAAGGCGTAGGTTGGCCTGGCTTTGGCTTGCTCTGGTCATTATGGCGATTGATGATCCCTGTGCAAACAATAAGTCAGAGTCCCTTAAAAAACTCCCAGTGTATAAAGGAACGTTCGGGCCCCCCAGTCGTCGCAGGGGTCCCTCACTCGGGTATCAGGACGAGAAAGGATATAACGGTGCATTGAAAGATCCAACAGTAAAAAGGGAAACAGAAGGGGGGTTCTAA ATGCATGAGCTGAGGCTCCCATGTCCCGCCGACCCTTCGAAAAAGTCAGGTCGTCAAACGGCTCATAGGGAGTCAGAAGCAAGCGGAGTCAAAGGCGGGTCAAACTCACATAAGCGGAGGGGGAGACACATTCATGAAAAGCGAGAAGCCGTGGGGGACTGGCCAACTATGAATAGATATCTGACTTTCGGATACCTTCTTATTAGAGAAAGGGGCAAGCCAAAACCAACTCCTAAAAAGTGGCTGGATCGAAGTATCTCGAACATTCTCCATCCGCCCGCCAGCTGCAGAGGGGGTTCGATTCCCGTTATACGCGATGTGGCGAAAAAGACGGATTCAACAAGATATGCCTTGCCTGCATTAAGATTTCAAACTTGTCGTCTACTTTTAGGAAATGTTCGGAACAGAGAACTTACAATAATACAACGCCGCATTCTCCGAAAATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCCGAGAGAAAATCTTAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCCTTTTTCATGGGGATTTACCCATCACAGAGATGCACAGAGGAACAGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTGAAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGGGCCCAGAACGCTTAAAGGTGGGGGAGAAGCAAGCCGAACCTCTGATCGACCTGGAAACATCACAAATTCTCGGCGTCGAGAGAGATTTGAGATTCCCCCAGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCTAAAAATCCGGTACATTCCGTTTTGTTTCCCATCCCAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTCATATAGGAGCTATAGCCGTTTCATTCCTATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAGATTCACGAAGAAGTCTTGCGCTATTTACCAGTGAGTGGTATTATTGGACTGATCTTTTGGTGGGAAATGTTCTTCATTTTAGATAATGAAACCATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTTAGATATACGGTTTATGCCGGAAAGATGGCAGTGACGGTGAGGAAAAGGCGTAGGTTGGCCTGGCTTTGGCTTGCTCTGGTCATTATGGCGATTGATGATCCCTGTGCAAACAATAAGTCAGAGTCCCTTAAAAAACTCCCAGTGTATAAAGGAACGTTCGGGCCCCCCAGTCGTCGCAGGGGTCCCTCACTCGGGTATCAGGACGAGAAAGGATATAACGGTGCATTGAAAGATCCAACAGTAAAAAGGGAAACAGAAGGGGGGTTCTAA ATGCATGAGCTGAGGCTCCCATGTCCCGCCGACCCTTCGAAAAAGTCAGGTCGTCAAACGGCTCATAGGGAGTCAGAAGCAAGCGGAGTCAAAGGCGGGTCAAACTCACATAAGCGGAGGGGGAGACACATTCATGAAAAGCGAGAAGCCGTGGGGGACTGGCCAACTATGAATAGATATCTGACTTTCGGATACCTTCTTATTAGAGAAAGGGGCAAGCCAAAACCAACTCCTAAAAAGTGGCTGGATCGAAGTATCTCGAACATTCTCCATCCGCCCGCCAGCTGCAGAGGGGGTTCGATTCCCGTTATACGCGATGTGGCGAAAAAGACGGATTCAACAAGATATGCCTTGCCTGCATTAAGATTTCAAACTTGTCGTCTACTTTTAGGAAATGTTCGGAACAGAGAACTTACAATAATACAACGCCGCATTCTCCGAAAATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCCGAGAGAAAATCTTAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCCTTTTTCATGGGGATTTACCCATCACAGAGATGCACAGAGGAACAGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTGAAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGGGCCCAGAACGCTTAAAGGTGGGGGAGAAGCAAGCCGAACCTCTGATCGACCTGGAAACATCACAAATTCTCGGCGTCGAGAGAGATTTGAGATTCCCCCAGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCTAAAAATCCGGTACATTCCGTTTTGTTTCCCATCCCAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTCATATAGGAGCTATAGCCGTTTCATTCCTATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAGATTCACGAAGAAGTCTTGCGCTATTTACCAGTGAGTGGTATTATTGGACTGATCTTTTGGTGGGAAATGTTCTTCATTTTAGATAATGAAACCATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTTAGATATACGGTTTATGCCGGAAAGATGGCAGTGACGGTGAGGAAAAGGCGTAGGTTGGCCTGGCTTTGGCTTGCTCTGGTCATTATGGCGATTGATGATCCCTGTGCAAACAATAAGTCAGAGTCCCTTAAAAAACTCCCAGTGTATAAAGGAACGTTCGGGCCCCCCAGTCGTCGCAGGGGTCCCTCACTCGGGTATCAGGACGAGAAAGGATATAACGGTGCATTGAAAGATCCAACAGTAAAAAGGGAAACAGAAGGGGGGTTCTAA MHELRLPCPADPSKKSGRQTAHRESEASGVKGGSNSHKRRGRHIHEKREAVGDWPTMNRYLTFGYLLIRERGKPKPTPKKWLDRSISNILHPPASCRGGSIPVIRDVAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMGPRTLKGGGEASRTSDRPGNITNSRRRERFEIPPALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVSFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKMAVTVRKRRRLAWLWLALVIMAIDDPCANNKSESLKKLPVYKGTFGPPSRRRGPSLGYQDEKGYNGALKDPTVKRETEGGF Homology
BLAST of Tan0017535 vs. ExPASy Swiss-Prot
Match: P60498 (NADH-ubiquinone oxidoreductase chain 6 OS=Brassica campestris OX=3711 GN=ND6 PE=2 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 6.9e-60 Identity = 119/123 (96.75%), Postives = 122/123 (99.19%), Query Frame = 0
BLAST of Tan0017535 vs. ExPASy Swiss-Prot
Match: Q02500 (NADH-ubiquinone oxidoreductase chain 6 OS=Triticum aestivum OX=4565 GN=ND6 PE=3 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 3.0e-55 Identity = 114/123 (92.68%), Postives = 118/123 (95.93%), Query Frame = 0
BLAST of Tan0017535 vs. ExPASy Swiss-Prot
Match: P60497 (NADH-ubiquinone oxidoreductase chain 6 OS=Arabidopsis thaliana OX=3702 GN=ND6 PE=1 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 9.6e-54 Identity = 113/122 (92.62%), Postives = 117/122 (95.90%), Query Frame = 0
BLAST of Tan0017535 vs. ExPASy Swiss-Prot
Match: Q31708 (Ribosomal protein S4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS4 PE=1 SV=2) HSP 1 Score: 194.1 bits (492), Expect = 3.5e-48 Identity = 103/125 (82.40%), Postives = 111/125 (88.80%), Query Frame = 0
BLAST of Tan0017535 vs. ExPASy Swiss-Prot
Match: P26850 (NADH-ubiquinone oxidoreductase chain 6 OS=Marchantia polymorpha OX=3197 GN=ND6 PE=2 SV=2) HSP 1 Score: 169.9 bits (429), Expect = 7.2e-41 Identity = 91/122 (74.59%), Postives = 104/122 (85.25%), Query Frame = 0
BLAST of Tan0017535 vs. NCBI nr
Match: TXG46253.1 (hypothetical protein EZV62_028284 [Acer yangbiense]) HSP 1 Score: 516.5 bits (1329), Expect = 2.4e-142 Identity = 280/341 (82.11%), Postives = 292/341 (85.63%), Query Frame = 0
BLAST of Tan0017535 vs. NCBI nr
Match: XP_038876762.1 (LOW QUALITY PROTEIN: ribosomal protein S4, mitochondrial [Benincasa hispida]) HSP 1 Score: 296.2 bits (757), Expect = 5.1e-76 Identity = 151/172 (87.79%), Postives = 158/172 (91.86%), Query Frame = 0
BLAST of Tan0017535 vs. NCBI nr
Match: TMW87924.1 (hypothetical protein EJD97_019266 [Solanum chilense]) HSP 1 Score: 287.3 bits (734), Expect = 2.3e-73 Identity = 161/241 (66.80%), Postives = 171/241 (70.95%), Query Frame = 0
BLAST of Tan0017535 vs. NCBI nr
Match: KAF3954221.1 (hypothetical protein CMV_020407 [Castanea mollissima]) HSP 1 Score: 283.9 bits (725), Expect = 2.6e-72 Identity = 143/155 (92.26%), Postives = 148/155 (95.48%), Query Frame = 0
BLAST of Tan0017535 vs. NCBI nr
Match: XP_023520731.1 (uncharacterized protein LOC111784180, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 278.5 bits (711), Expect = 1.1e-70 Identity = 146/180 (81.11%), Postives = 155/180 (86.11%), Query Frame = 0
BLAST of Tan0017535 vs. ExPASy TrEMBL
Match: A0A5C7GNW2 (S4 RNA-binding domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_028284 PE=3 SV=1) HSP 1 Score: 516.5 bits (1329), Expect = 1.2e-142 Identity = 280/341 (82.11%), Postives = 292/341 (85.63%), Query Frame = 0
BLAST of Tan0017535 vs. ExPASy TrEMBL
Match: A0A5C7GQ79 (S4 RNA-binding domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027769 PE=3 SV=1) HSP 1 Score: 431.4 bits (1108), Expect = 4.9e-117 Identity = 241/306 (78.76%), Postives = 254/306 (83.01%), Query Frame = 0
BLAST of Tan0017535 vs. ExPASy TrEMBL
Match: A0A6N2B216 (S4 RNA-binding domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_019266 PE=3 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 1.1e-73 Identity = 161/241 (66.80%), Postives = 171/241 (70.95%), Query Frame = 0
BLAST of Tan0017535 vs. ExPASy TrEMBL
Match: A0A494G916 (S4 RNA-binding domain-containing protein OS=Solanum lycopersicum OX=4081 PE=3 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 1.8e-71 Identity = 144/173 (83.24%), Postives = 153/173 (88.44%), Query Frame = 0
BLAST of Tan0017535 vs. ExPASy TrEMBL
Match: A0A7J8YXW2 (S4 RNA-binding domain-containing protein OS=Gossypium laxum OX=34288 GN=Golax_016669 PE=3 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.3e-69 Identity = 142/180 (78.89%), Postives = 149/180 (82.78%), Query Frame = 0
BLAST of Tan0017535 vs. TAIR 10
Match: ATMG00270.1 (NADH dehydrogenase 6 ) HSP 1 Score: 233.0 bits (593), Expect = 4.9e-61 Identity = 119/123 (96.75%), Postives = 122/123 (99.19%), Query Frame = 0
BLAST of Tan0017535 vs. TAIR 10
Match: AT2G07734.1 (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein ) HSP 1 Score: 214.9 bits (546), Expect = 1.4e-55 Identity = 110/125 (88.00%), Postives = 116/125 (92.80%), Query Frame = 0
BLAST of Tan0017535 vs. TAIR 10
Match: ATMG00290.1 (mitochondrial ribosomal protein S4 ) HSP 1 Score: 214.9 bits (546), Expect = 1.4e-55 Identity = 110/125 (88.00%), Postives = 116/125 (92.80%), Query Frame = 0
BLAST of Tan0017535 vs. TAIR 10
Match: AT2G07718.1 (Cytochrome b/b6 protein ) HSP 1 Score: 47.0 bits (110), Expect = 5.0e-05 Identity = 29/64 (45.31%), Postives = 38/64 (59.38%), Query Frame = 0
BLAST of Tan0017535 vs. TAIR 10
Match: ATMG00590.1 (Cytochrome b/b6 protein ) HSP 1 Score: 47.0 bits (110), Expect = 5.0e-05 Identity = 29/64 (45.31%), Postives = 38/64 (59.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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