Tan0017532 (gene) Snake gourd v1

Overview
NameTan0017532
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionEnzymatic polyprotein
LocationLG11: 32675066 .. 32676550 (-)
RNA-Seq ExpressionTan0017532
SyntenyTan0017532
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATACAAACATTTCTCCAAGAGCTTTAAGGTCTTCCCCAAAGGGATCAACAATCCTTATAGAAGCAAATCTTGATAAATCCTCAATTACTGTTCCAAAAAGTTTATCTTGGGAACAAATCACTAGAAATCCAACGTGGAAGCTTACGGAAGCTTTCACTCTACCAAAAAGAAATTCAAATTTAGCCCAAATTATCGAACATACAAATGGAGCTGTTGAAATACAATTCTCAGAAGAAACGGAGGTCACTAAAGTCAAGGAATTCATGTCCTCAAGACCAAGTACCTCTCGAACCTGTGACCTCGGTTTCGACTCAAAATTCTATTTTGATCAATCTAACTCGTTGCGAGTAAAATCAGTCAACATAGAACAAAATGTAGCAAATGTTCATTATGAAGCACAACCACAATCTCCAACCCAAACCGACATGGATAATCGATCTATGTTCTCTAGTCAATTAAATGTTCTTATTGAAGGATTTTCAATTAACAAAGAAGCACTAAAAAAGGATTTCCTTTCAATAAAAAACAAAACAAAGAGGAATGCCTTTTTCCAAAAATATGATGAAAACCAAAGATCTGAAATAAGGTCAAAATGGTATTCATTTATGGAAGAAATAGAGCAAAATATTCCATTTTTTACATGGATGAAACAATCTGAAAACGAAATCAATATGTTGCTAGAAACATGGAAAACAAGTCAAAGGGGAAATATTCACTCAACGCATCCTCCCCTAGAGGAGATAGAATTTGAAACAATTTATGGAGAAAAGGTCAAAGCTAGTCCATTTAAAAATATTAGTGAGAAGGAAGAGAAAAATGTTCCTACCCTCAAAGATATAAAAAATATTCAACTTCAGAATAATTTTTCCAATAAAATTCTTTCCACAATAGCAAATCAAGTAGAAAAGATTGAGGGAAAAATATCAAAACCTTCCATTGCTTCGTCTTCAAATGGGGGAATACTAATACCTCCAATAGATGAATCAATTCCTTTATTTAAACCTACAATCATTGATAGCAAAATTAAAATAAGAACTAAAGAGGAAGAAACTTTAGCTTTAATAGAAGAAAAGCTAAACAGCCTTCATATTTCAAAAACAATTCCCACAATAAACGTTATAAAGGATTCCATTATTGACCAAATTATCCAAAAGACTAAGGATCTTTCCCTAAATGAAGAAAAAATCGAGTCTCCAAATGAAGTCTTAAAAATTGGTACAAAATCAAAAATATCGAAATATTCTACAATGAGAAATTGGTATCCTCAACCATCATTCCCAGATATTCAATTTGAAGAAAAAACACAAATGACTCAAGCCGTTTATGATGGATTAGCCATCCACGAATGGAATGTGGACGGAATATCTGATTATCTAATCATAAACGTAATAAACGAAATGTTAATCGCCTCCAATGCCTATAGACAAAGAGGCAAAAGAGATCATGAAATAGCACAACTTCTCGTTGCCGGATTCACATGA

mRNA sequence

ATGAATACAAACATTTCTCCAAGAGCTTTAAGGTCTTCCCCAAAGGGATCAACAATCCTTATAGAAGCAAATCTTGATAAATCCTCAATTACTGTTCCAAAAAGTTTATCTTGGGAACAAATCACTAGAAATCCAACGTGGAAGCTTACGGAAGCTTTCACTCTACCAAAAAGAAATTCAAATTTAGCCCAAATTATCGAACATACAAATGGAGCTGTTGAAATACAATTCTCAGAAGAAACGGAGGTCACTAAAGTCAAGGAATTCATGTCCTCAAGACCAATAAAATCAGTCAACATAGAACAAAATGTAGCAAATGTTCATTATGAAGCACAACCACAATCTCCAACCCAAACCGACATGGATAATCGATCTATAAATTGGTATCCTCAACCATCATTCCCAGATATTCAATTTGAAGAAAAAACACAAATGACTCAAGCCGTTTATGATGGATTAGCCATCCACGAATGGAATGTGGACGGAATATCTGATTATCTAATCATAAACGTAATAAACGAAATGTTAATCGCCTCCAATGCCTATAGACAAAGAGGCAAAAGAGATCATGAAATAGCACAACTTCTCGTTGCCGGATTCACATGA

Coding sequence (CDS)

ATGAATACAAACATTTCTCCAAGAGCTTTAAGGTCTTCCCCAAAGGGATCAACAATCCTTATAGAAGCAAATCTTGATAAATCCTCAATTACTGTTCCAAAAAGTTTATCTTGGGAACAAATCACTAGAAATCCAACGTGGAAGCTTACGGAAGCTTTCACTCTACCAAAAAGAAATTCAAATTTAGCCCAAATTATCGAACATACAAATGGAGCTGTTGAAATACAATTCTCAGAAGAAACGGAGGTCACTAAAGTCAAGGAATTCATGTCCTCAAGACCAATAAAATCAGTCAACATAGAACAAAATGTAGCAAATGTTCATTATGAAGCACAACCACAATCTCCAACCCAAACCGACATGGATAATCGATCTATAAATTGGTATCCTCAACCATCATTCCCAGATATTCAATTTGAAGAAAAAACACAAATGACTCAAGCCGTTTATGATGGATTAGCCATCCACGAATGGAATGTGGACGGAATATCTGATTATCTAATCATAAACGTAATAAACGAAATGTTAATCGCCTCCAATGCCTATAGACAAAGAGGCAAAAGAGATCATGAAATAGCACAACTTCTCGTTGCCGGATTCACATGA

Protein sequence

MNTNISPRALRSSPKGSTILIEANLDKSSITVPKSLSWEQITRNPTWKLTEAFTLPKRNSNLAQIIEHTNGAVEIQFSEETEVTKVKEFMSSRPIKSVNIEQNVANVHYEAQPQSPTQTDMDNRSINWYPQPSFPDIQFEEKTQMTQAVYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRDHEIAQLLVAGFT
Homology
BLAST of Tan0017532 vs. NCBI nr
Match: XP_023520850.1 (uncharacterized protein LOC111784362 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-24
Identity = 58/86 (67.44%), Postives = 73/86 (84.88%), Query Frame = 0

Query: 117 TQTDMDNRSINWYPQPSFPDIQFEEKTQMTQAVYDGLAIHEWNVDGISDYLIINVINEML 176
           +Q +  N+  NWYPQPSFPDIQFEEKT  TQA YDGLAI+EWN+DG+SDYLI+NV+NEM+
Sbjct: 268 SQNNASNQK-NWYPQPSFPDIQFEEKTLQTQAHYDGLAIYEWNIDGLSDYLIMNVVNEMM 327

Query: 177 IASNAYRQRG-KRDHEIAQLLVAGFT 202
           +A+ AY+ +G K DH+IAQ+LV GFT
Sbjct: 328 MAAGAYKLQGHKSDHQIAQVLVTGFT 352

BLAST of Tan0017532 vs. NCBI nr
Match: CAN75928.1 (hypothetical protein VITISV_021028 [Vitis vinifera])

HSP 1 Score: 115.2 bits (287), Expect = 6.7e-22
Identity = 74/235 (31.49%), Postives = 123/235 (52.34%), Query Frame = 0

Query: 1   MNTNISPRALRSSPKGSTILIEAN-LDKSSITVPKSLSWEQITRNPTWKLTEAF-TLPKR 60
           MNT++   AL +SPKG T    ++ LDKS   +PK + W+ +     W    A   + +R
Sbjct: 153 MNTSVGSGALCTSPKGETTYFHSDMLDKSDFIIPKKILWKDVDFPENWHFANAVPAIAQR 212

Query: 61  NSNLAQIIEHTNGAVEIQFSE---ETEVTKVKEFMSSR------PIKSVNIEQ-----NV 120
           + ++ QI+++ +G  E+ FS+    +   +V  +  SR      P+++   E+     N 
Sbjct: 213 SESIEQIVQYPDGGGELVFSKSFRHSSSPRVSVYEPSRASSSSIPVRTTREEEGSSSGNP 272

Query: 121 ANVHYEAQPQSPTQTD-------------MDN----RSINWYPQPSFPDIQFEEKTQMTQ 180
            NV       S  + D             ++N    ++ N+YP+P+FPD+QFEE+ Q TQ
Sbjct: 273 KNVKLTGDISSEEEADELIKMFEEPHNQIINNLETFKTRNYYPRPTFPDMQFEERNQYTQ 332

Query: 181 AVYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGK-RDHEIAQLLVAGFT 202
           A Y    I+EWN+D +++Y I+  + EM + S AY+   +  DH +AQ +VAGFT
Sbjct: 333 ASYTSGTIYEWNIDXMTEYNILTKLQEMTMVSTAYKLNNRLPDHAVAQTIVAGFT 387

BLAST of Tan0017532 vs. NCBI nr
Match: KAA0057417.1 (Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-19
Identity = 62/148 (41.89%), Postives = 91/148 (61.49%), Query Frame = 0

Query: 1   MNTNISPRALRSSPKGSTILIEANLDKSSITVPKSLSWEQITRNPTWKLTEAFTLPKRNS 60
           M+TN+SP+AL  SPKG T+L+E N++KSS+T+P++L W+++T+NP WKL    T  KR+S
Sbjct: 126 MHTNLSPKALGISPKGYTMLMEVNVEKSSMTIPRNLKWDELTKNPIWKLQGETTPIKRSS 185

Query: 61  NLAQIIEHTNGAVEIQFSEETEVTKVKEFMSSRP----IK-----------------SVN 120
             A IIE  +G VE+QF+      ++ E MSSRP    IK                 SV+
Sbjct: 186 TEASIIEFPDGNVEVQFNTGISYPRISEIMSSRPSTSSIKTETSYRDTLRRSESIRASVD 245

Query: 121 IEQNVANVHYEAQPQ--SPTQTDMDNRS 126
               + +VHYE + +  SPTQ++M+ RS
Sbjct: 246 FSHTIPDVHYEKEDESLSPTQSNMERRS 273

BLAST of Tan0017532 vs. NCBI nr
Match: TYK01213.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 106.3 bits (264), Expect = 3.1e-19
Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 0

Query: 1   MNTNISPRALRSSPKGSTILIEANLDKSSITVPKSLSWEQITRNPTWKLTEAFTLPKRNS 60
           M+TNISP+AL  SPKG T+L+E N++KSS+T+P++L W  +T++P WKL    T  +RNS
Sbjct: 218 MHTNISPKALGVSPKGYTMLMEVNMEKSSMTIPRTLKWADLTKDPIWKLQGETTPVRRNS 277

Query: 61  NLAQIIEHTNGAVEIQFSEETEVTKVKEFMSSRPI----------------------KSV 120
             A I E  N  VE+QF+ ET   ++ E MSSRP                        S+
Sbjct: 278 TEASITEFPNRNVEVQFNSETSYPRISEIMSSRPSTSSIARSESSFPDTLRRSESIRASM 337

Query: 121 NIEQNVANVHYEAQPQ--SPTQTDMDNRSINWYPQ 132
           +  +++  VHY+ + +  SPTQ+DM+ R+   Y Q
Sbjct: 338 DFSRSIPTVHYKKEDESLSPTQSDMERRTEPVYNQ 372

BLAST of Tan0017532 vs. NCBI nr
Match: KAA0066201.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 106.3 bits (264), Expect = 3.1e-19
Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 0

Query: 1   MNTNISPRALRSSPKGSTILIEANLDKSSITVPKSLSWEQITRNPTWKLTEAFTLPKRNS 60
           M+TNISP+AL  SPKG T+L+E N++KSS+T+P++L W  +T++P WKL    T  +RNS
Sbjct: 218 MHTNISPKALGVSPKGYTMLMEVNMEKSSMTIPRTLKWADLTKDPIWKLQGETTPVRRNS 277

Query: 61  NLAQIIEHTNGAVEIQFSEETEVTKVKEFMSSRPI----------------------KSV 120
             A I E  N  VE+QF+ ET   ++ E MSSRP                        S+
Sbjct: 278 TEASITEFPNRNVEVQFNSETSYPRISEIMSSRPSTSSIARSESSFPDTLRRSESIRASM 337

Query: 121 NIEQNVANVHYEAQPQ--SPTQTDMDNRSINWYPQ 132
           +  +++  VHY+ + +  SPTQ+DM+ R+   Y Q
Sbjct: 338 DFSRSIPTVHYKKEDESLSPTQSDMERRTEPVYNQ 372

BLAST of Tan0017532 vs. ExPASy TrEMBL
Match: A5AQL0 (CCHC-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_021028 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.3e-22
Identity = 74/235 (31.49%), Postives = 123/235 (52.34%), Query Frame = 0

Query: 1   MNTNISPRALRSSPKGSTILIEAN-LDKSSITVPKSLSWEQITRNPTWKLTEAF-TLPKR 60
           MNT++   AL +SPKG T    ++ LDKS   +PK + W+ +     W    A   + +R
Sbjct: 153 MNTSVGSGALCTSPKGETTYFHSDMLDKSDFIIPKKILWKDVDFPENWHFANAVPAIAQR 212

Query: 61  NSNLAQIIEHTNGAVEIQFSE---ETEVTKVKEFMSSR------PIKSVNIEQ-----NV 120
           + ++ QI+++ +G  E+ FS+    +   +V  +  SR      P+++   E+     N 
Sbjct: 213 SESIEQIVQYPDGGGELVFSKSFRHSSSPRVSVYEPSRASSSSIPVRTTREEEGSSSGNP 272

Query: 121 ANVHYEAQPQSPTQTD-------------MDN----RSINWYPQPSFPDIQFEEKTQMTQ 180
            NV       S  + D             ++N    ++ N+YP+P+FPD+QFEE+ Q TQ
Sbjct: 273 KNVKLTGDISSEEEADELIKMFEEPHNQIINNLETFKTRNYYPRPTFPDMQFEERNQYTQ 332

Query: 181 AVYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGK-RDHEIAQLLVAGFT 202
           A Y    I+EWN+D +++Y I+  + EM + S AY+   +  DH +AQ +VAGFT
Sbjct: 333 ASYTSGTIYEWNIDXMTEYNILTKLQEMTMVSTAYKLNNRLPDHAVAQTIVAGFT 387

BLAST of Tan0017532 vs. ExPASy TrEMBL
Match: A0A5A7URX9 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00980 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 6.8e-20
Identity = 62/148 (41.89%), Postives = 91/148 (61.49%), Query Frame = 0

Query: 1   MNTNISPRALRSSPKGSTILIEANLDKSSITVPKSLSWEQITRNPTWKLTEAFTLPKRNS 60
           M+TN+SP+AL  SPKG T+L+E N++KSS+T+P++L W+++T+NP WKL    T  KR+S
Sbjct: 126 MHTNLSPKALGISPKGYTMLMEVNVEKSSMTIPRNLKWDELTKNPIWKLQGETTPIKRSS 185

Query: 61  NLAQIIEHTNGAVEIQFSEETEVTKVKEFMSSRP----IK-----------------SVN 120
             A IIE  +G VE+QF+      ++ E MSSRP    IK                 SV+
Sbjct: 186 TEASIIEFPDGNVEVQFNTGISYPRISEIMSSRPSTSSIKTETSYRDTLRRSESIRASVD 245

Query: 121 IEQNVANVHYEAQPQ--SPTQTDMDNRS 126
               + +VHYE + +  SPTQ++M+ RS
Sbjct: 246 FSHTIPDVHYEKEDESLSPTQSNMERRS 273

BLAST of Tan0017532 vs. ExPASy TrEMBL
Match: A0A5A7VKK8 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002180 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.5e-19
Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 0

Query: 1   MNTNISPRALRSSPKGSTILIEANLDKSSITVPKSLSWEQITRNPTWKLTEAFTLPKRNS 60
           M+TNISP+AL  SPKG T+L+E N++KSS+T+P++L W  +T++P WKL    T  +RNS
Sbjct: 218 MHTNISPKALGVSPKGYTMLMEVNMEKSSMTIPRTLKWADLTKDPIWKLQGETTPVRRNS 277

Query: 61  NLAQIIEHTNGAVEIQFSEETEVTKVKEFMSSRPI----------------------KSV 120
             A I E  N  VE+QF+ ET   ++ E MSSRP                        S+
Sbjct: 278 TEASITEFPNRNVEVQFNSETSYPRISEIMSSRPSTSSIARSESSFPDTLRRSESIRASM 337

Query: 121 NIEQNVANVHYEAQPQ--SPTQTDMDNRSINWYPQ 132
           +  +++  VHY+ + +  SPTQ+DM+ R+   Y Q
Sbjct: 338 DFSRSIPTVHYKKEDESLSPTQSDMERRTEPVYNQ 372

BLAST of Tan0017532 vs. ExPASy TrEMBL
Match: A0A5D3BN76 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75441G00050 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.5e-19
Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 0

Query: 1   MNTNISPRALRSSPKGSTILIEANLDKSSITVPKSLSWEQITRNPTWKLTEAFTLPKRNS 60
           M+TNISP+AL  SPKG T+L+E N++KSS+T+P++L W  +T++P WKL    T  +RNS
Sbjct: 218 MHTNISPKALGVSPKGYTMLMEVNMEKSSMTIPRTLKWADLTKDPIWKLQGETTPVRRNS 277

Query: 61  NLAQIIEHTNGAVEIQFSEETEVTKVKEFMSSRPI----------------------KSV 120
             A I E  N  VE+QF+ ET   ++ E MSSRP                        S+
Sbjct: 278 TEASITEFPNRNVEVQFNSETSYPRISEIMSSRPSTSSIARSESSFPDTLRRSESIRASM 337

Query: 121 NIEQNVANVHYEAQPQ--SPTQTDMDNRSINWYPQ 132
           +  +++  VHY+ + +  SPTQ+DM+ R+   Y Q
Sbjct: 338 DFSRSIPTVHYKKEDESLSPTQSDMERRTEPVYNQ 372

BLAST of Tan0017532 vs. ExPASy TrEMBL
Match: A0A5D3C4I7 (Movement protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold594G00050 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.0e-19
Identity = 64/154 (41.56%), Postives = 91/154 (59.09%), Query Frame = 0

Query: 1   MNTNISPRALRSSPKGSTILIEANLDKSSITVPKSLSWEQITRNPTWKLTEAFTLPKRNS 60
           M+TN+SP+AL  SPKG T+L+E N++KSS+T+P++L W+++T+NP WKL    T  KR+S
Sbjct: 220 MHTNLSPKALGISPKGYTMLMEVNVEKSSMTIPRNLKWDELTKNPIWKLQGETTPIKRSS 279

Query: 61  NLAQIIEHTNGAVEIQFSEETEVTKVKEFMSSRP----IK-----------------SVN 120
             A I E  +G VE+QF+      ++ E MSSRP    IK                 SV+
Sbjct: 280 TEASITEFPDGNVEVQFNTGISYPRISEIMSSRPSTSSIKTETSYKDTLRRSESIRASVD 339

Query: 121 IEQNVANVHYEAQPQS--PTQTDMDNRSINWYPQ 132
               + +VHYE +  S  PTQ+DM+ RS   Y Q
Sbjct: 340 FSHTIPDVHYEKKDGSLYPTQSDMEKRSEPVYNQ 373

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023520850.11.1e-2467.44uncharacterized protein LOC111784362 [Cucurbita pepo subsp. pepo][more]
CAN75928.16.7e-2231.49hypothetical protein VITISV_021028 [Vitis vinifera][more]
KAA0057417.11.4e-1941.89Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprote... [more]
TYK01213.13.1e-1939.35Enzymatic polyprotein [Cucumis melo var. makuwa][more]
KAA0066201.13.1e-1939.35Enzymatic polyprotein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A5AQL03.3e-2231.49CCHC-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_021028 ... [more]
A0A5A7URX96.8e-2041.89Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21... [more]
A0A5A7VKK81.5e-1939.35Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21... [more]
A0A5D3BN761.5e-1939.35Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75... [more]
A0A5D3C4I72.0e-1941.56Movement protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold594G000... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0017532.1Tan0017532.1mRNA