Tan0017406 (gene) Snake gourd v1

Overview


Name	Tan0017406
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	transcription factor TCP24
Location	LG05: 74920232 .. 74920861 (-)
RNA-Seq Expression	Tan0017406
Synteny	Tan0017406

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTCAAACTTGAAGCAAGAGGGAGTTCAAGTTCAAGCAAAACAAATGGAGGGCAAAAGAAACAGAGCAACTTCAAGGCAAGGGGCAAGTTGTGTAAGAGGCAACCCAAGAATTTTTAAAGTCTCACCTTTATTTGGAGGCAAAGACAGGCACAGCAAAGTTTGTACAATAAAGGGTTTAAGAGACAGAAGAATTAGGCTTTCAGCTCCAACTGCTATTCAAGTTTATGATTTACAAAACAGACTTGGCCTCAGCCAACCCAGCAAAGTCATTGATTGGCTAATTGAAGTCACAAGATTTGAAATTGATAAGCTCCCACCACTCCATTTTCCAAAACATTTTGACCCAAATGTTTCAATTCTTCATCAATCTTCTGTTCTTCTTCCTCAGATTTGCCATTTTGATGTTGCAATGAAGGCCAAAAATCAAGAAACTGACAGGCTTTTCGTTGAAAAGTTGTCTCCTTTAGCTAACCATGATTCTTTTTCTGCTCTTCCAACCATTTCCATGGATGAAAATTCTTCCCATTTTGAGCCTTCAAGCTTTCCATCCCCATTAATGGAAGCTAATCTAGCTTCGTTTTCCTCGCCTTCTTCTGCGCAGTTGCTGTTCTGTCCGCCTCGGTGA

mRNA sequence

ATGATCTCAAACTTGAAGCAAGAGGGAGTTCAAGTTCAAGCAAAACAAATGGAGGGCAAAAGAAACAGAGCAACTTCAAGGCAAGGGGCAAGTTGTGTAAGAGGCAACCCAAGAATTTTTAAAGTCTCACCTTTATTTGGAGGCAAAGACAGGCACAGCAAAGTTTGTACAATAAAGGGTTTAAGAGACAGAAGAATTAGGCTTTCAGCTCCAACTGCTATTCAAGTTTATGATTTACAAAACAGACTTGGCCTCAGCCAACCCAGCAAAGTCATTGATTGGCTAATTGAAGTCACAAGATTTGAAATTGATAAGCTCCCACCACTCCATTTTCCAAAACATTTTGACCCAAATGTTTCAATTCTTCATCAATCTTCTGTTCTTCTTCCTCAGATTTGCCATTTTGATGTTGCAATGAAGGCCAAAAATCAAGAAACTGACAGGCTTTTCGTTGAAAAGTTGTCTCCTTTAGCTAACCATGATTCTTTTTCTGCTCTTCCAACCATTTCCATGGATGAAAATTCTTCCCATTTTGAGCCTTCAAGCTTTCCATCCCCATTAATGGAAGCTAATCTAGCTTCGTTTTCCTCGCCTTCTTCTGCGCAGTTGCTGTTCTGTCCGCCTCGGTGA

Coding sequence (CDS)

ATGATCTCAAACTTGAAGCAAGAGGGAGTTCAAGTTCAAGCAAAACAAATGGAGGGCAAAAGAAACAGAGCAACTTCAAGGCAAGGGGCAAGTTGTGTAAGAGGCAACCCAAGAATTTTTAAAGTCTCACCTTTATTTGGAGGCAAAGACAGGCACAGCAAAGTTTGTACAATAAAGGGTTTAAGAGACAGAAGAATTAGGCTTTCAGCTCCAACTGCTATTCAAGTTTATGATTTACAAAACAGACTTGGCCTCAGCCAACCCAGCAAAGTCATTGATTGGCTAATTGAAGTCACAAGATTTGAAATTGATAAGCTCCCACCACTCCATTTTCCAAAACATTTTGACCCAAATGTTTCAATTCTTCATCAATCTTCTGTTCTTCTTCCTCAGATTTGCCATTTTGATGTTGCAATGAAGGCCAAAAATCAAGAAACTGACAGGCTTTTCGTTGAAAAGTTGTCTCCTTTAGCTAACCATGATTCTTTTTCTGCTCTTCCAACCATTTCCATGGATGAAAATTCTTCCCATTTTGAGCCTTCAAGCTTTCCATCCCCATTAATGGAAGCTAATCTAGCTTCGTTTTCCTCGCCTTCTTCTGCGCAGTTGCTGTTCTGTCCGCCTCGGTGA

Protein sequence

MISNLKQEGVQVQAKQMEGKRNRATSRQGASCVRGNPRIFKVSPLFGGKDRHSKVCTIKGLRDRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHFPKHFDPNVSILHQSSVLLPQICHFDVAMKAKNQETDRLFVEKLSPLANHDSFSALPTISMDENSSHFEPSSFPSPLMEANLASFSSPSSAQLLFCPPR

Homology

[Close]

BLAST of Tan0017406 vs. ExPASy Swiss-Prot
Match: Q9FME3 (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31
Identity = 67/101 (66.34%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 16  QMEGKRNRATSRQGASCVRGNPRIFKVSPLFGGKDRHSKVCTIKGLRDRRIRLSAPTAIQ 75
           Q +   + ++SRQ  S  R NPRI +VS  FGGKDRHSKVCT++GLRDRRIRLS PTAIQ
Sbjct: 32  QQQQPSSVSSSRQWTSAFR-NPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQ 91

Query: 76  VYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHFPKHFD 117
           +YDLQ+RLGLSQPSKVIDWL+E  + ++DKLPPL FP  F+
Sbjct: 92  LYDLQDRLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFN 131

[Close]

BLAST of Tan0017406 vs. ExPASy Swiss-Prot
Match: Q9LEZ9 (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-29
Identity = 81/174 (46.55%), Postives = 103/174 (59.20%), Query Frame = 0


Query: 36  NPRIFKVSPLFGGKDRHSKVCTIKGLRDRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWL 95
           NPRI +VS  FGGKDRHSKVCT++GLRDRRIRLS  TAIQVYDLQ RLGLSQPSKVIDWL
Sbjct: 21  NPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVIDWL 80

Query: 96  IEVTRFEIDKLPPLHFPKHF---DPNVSILHQSSVLLPQICHFDVAM---------KAKN 155
           +EV + ++D LPPL FP  F   +PN++ L +S    P +  FD+           K K 
Sbjct: 81  LEVAKNDVDLLPPLQFPPGFHQLNPNLTGLGES---FPGV--FDLGRTQREALDLEKRKW 140

Query: 156 QETDRLFVEKLSPLANHDSFS--------ALPTISMDENSSHFEPSSFPSPLME 190
              D +F      + +H+ FS          PTI+   +S H+        L++
Sbjct: 141 VNLDHVF----DHIDHHNHFSNSIQSNKLYFPTITSSSSSYHYNLGHLQQSLLD 185

[Close]

BLAST of Tan0017406 vs. ExPASy Swiss-Prot
Match: Q9S7W5 (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.7e-26
Identity = 67/130 (51.54%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 7   QEGVQVQA---KQMEGKRNRATSRQGASCVRG-NPRIFKVSPLFGGKDRHSKVCTIKGLR 66
           QE  +V+A   K +  K+  + S   +S ++  +PRI +VS  FGGKDRHSKVCT++GLR
Sbjct: 29  QEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLR 88

Query: 67  DRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHF-PKHFDPNVSI 126
           DRR+RLS PTAIQ+YDLQ RLG+ QPSK +DWL++  + EID+LPPL   P++F  ++  
Sbjct: 89  DRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENF--SIFN 148

Query: 127 LHQSSVLLPQ 132
            HQS + L Q
Sbjct: 149 HHQSFLNLGQ 156

[Close]

BLAST of Tan0017406 vs. ExPASy Swiss-Prot
Match: Q9C758 (Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.8e-20
Identity = 73/185 (39.46%), Postives = 99/185 (53.51%), Query Frame = 0


Query: 8   EGVQVQAKQ-MEGKRNRATSRQGASCVR--GNP--RIFKVSPLFGGKDRHSKVCTIKGLR 67
           E +++Q  Q  + ++ +  S      +R   NP  RI +VS   GGKDRHSKV T KGLR
Sbjct: 5   EDIELQKHQEQQSRKLQRFSEDNTGLMRNWNNPSSRIIRVSRASGGKDRHSKVLTSKGLR 64

Query: 68  DRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHFP-KHFDPN--- 127
           DRRIRLS  TAIQ YDLQ+RLG  QPSK ++WLI      I  LP L+    H D N   
Sbjct: 65  DRRIRLSVATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPLLNTNFDHLDQNQNQ 124

Query: 128 -----VSILHQSSVLLPQICHFDVAMKAKNQETDRLFVEKLSPLAN-HDSFSALPTISMD 178
                 S   +SS+L   +   ++  KA+ +  +R   ++   L N H SF+ L T   D
Sbjct: 125 TKSACSSGTSESSLL--SLSRTEIRGKARERARERTAKDRDKDLQNAHSSFTQLLTGGFD 184

[Close]

BLAST of Tan0017406 vs. ExPASy Swiss-Prot
Match: Q93V43 (Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.5e-19
Identity = 47/78 (60.26%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 38  RIFKVSPLFGGKDRHSKVCTIKGLRDRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWLIE 97
           RI +VS   GGKDRHSKV T KG RDRR+RLS  TA+Q YDLQ+RLG  QPSK ++WLI+
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 98  VTRFEIDKLPPL---HFP 113
                I +LP L   HFP
Sbjct: 92  AAEDSISELPSLNNTHFP 109

[Close]

BLAST of Tan0017406 vs. NCBI nr
Match: XP_022137286.1 (transcription factor TCP24 [Momordica charantia])

HSP 1 Score: 284.6 bits (727), Expect = 6.7e-73
Identity = 142/192 (73.96%), Postives = 162/192 (84.38%), Query Frame = 0


Query: 17  MEGK-RNRATSRQGASCVRGNPRIFKVSPLFGGKDRHSKVCTIKGLRDRRIRLSAPTAIQ 76
           ME K RNRA+SRQ   C+RGNPRIF+VS LFGGKDRHSKV TIKGLRDRRIRLS PTAIQ
Sbjct: 1   MEAKIRNRASSRQEGPCLRGNPRIFRVSTLFGGKDRHSKVFTIKGLRDRRIRLSTPTAIQ 60

Query: 77  VYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHFPKHFDPNVSILHQSSVLLPQICHF 136
           +YDLQN+LGL QPSKVIDWLI+VTRF+IDKLPPL  PK FDPN S+L+QSS+LLPQ+CHF
Sbjct: 61  LYDLQNKLGLGQPSKVIDWLIDVTRFDIDKLPPLQIPKDFDPNASVLYQSSMLLPQVCHF 120

Query: 137 DVAMKAKNQETDRLFVEKLSPLANHDSFSALPTISMDENSSHFEPSSFPSPLMEANLASF 196
           DVA+KA+N  T+RL  +KLSPL NH S  +L + +MDE+  HFEPSSFP P MEAN  SF
Sbjct: 121 DVAVKARNGGTERLLAQKLSPLVNHASLCSLQSNAMDESFCHFEPSSFPFPSMEANPDSF 180

Query: 197 SSPSSAQLLFCP 208
           SS +SAQLLFCP
Sbjct: 181 SSSASAQLLFCP 192

[Close]

BLAST of Tan0017406 vs. NCBI nr
Match: KAG6584403.1 (Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273.5 bits (698), Expect = 1.5e-69
Identity = 150/210 (71.43%), Postives = 166/210 (79.05%), Query Frame = 0


Query: 1   MISNLKQEGVQVQAKQMEGKRNRATSRQGASCVRGNPRIFKVSPLFGGKDRHSKVCTIKG 60
           MIS LKQEGV V+AKQMEGKR +  SRQG   +RGNPRIF+VSPLFGGKDRHSKVCT+KG
Sbjct: 8   MISKLKQEGVHVEAKQMEGKRKKGPSRQG-PFLRGNPRIFRVSPLFGGKDRHSKVCTMKG 67

Query: 61  LRDRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHFPKHFDPNVS 120
           LRDRRIRLSAPTAIQ+YDLQNRLGLSQPSKVIDWLI+VTRF+IDKLPPLHFPK FDPN S
Sbjct: 68  LRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLIDVTRFDIDKLPPLHFPKDFDPNAS 127

Query: 121 ILHQSSVLLPQICHFDVAMKAKNQETDRLFVEKLSPLANHDSFSALP--TISMDENSSHF 180
            LH   +        D A KAK++ET  L ++KLSP  NH SFSAL   T +M EN  HF
Sbjct: 128 FLHHLDI-------SDAAAKAKHEETGMLLLQKLSPSPNHASFSALQLRTNAMTENCCHF 187

Query: 181 EPSSFPSPLM-EANLASFSSPSSAQLLFCP 208
           +P SFP PLM +AN ASFSSPS  QLLF P
Sbjct: 188 DPPSFPFPLMDQANPASFSSPSE-QLLFRP 208

[Close]

BLAST of Tan0017406 vs. NCBI nr
Match: XP_023519980.1 (transcription factor TCP13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 272.3 bits (695), Expect = 3.4e-69
Identity = 149/210 (70.95%), Postives = 165/210 (78.57%), Query Frame = 0


Query: 1   MISNLKQEGVQVQAKQMEGKRNRATSRQGASCVRGNPRIFKVSPLFGGKDRHSKVCTIKG 60
           MIS LKQEGV V+AKQMEGKR +  SRQG   +RGNPRIF+VSPLFGGKDRHSKVCT+KG
Sbjct: 8   MISKLKQEGVHVEAKQMEGKRKKGPSRQG-PFLRGNPRIFRVSPLFGGKDRHSKVCTMKG 67

Query: 61  LRDRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHFPKHFDPNVS 120
           LRDRRIRLSAPTAIQ+YDLQNRLGLSQPSKVIDWLI+VTRF+IDKLPPLHFPK FDPN S
Sbjct: 68  LRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLIDVTRFDIDKLPPLHFPKDFDPNAS 127

Query: 121 ILHQSSVLLPQICHFDVAMKAKNQETDRLFVEKLSPLANHDSFSA--LPTISMDENSSHF 180
            LH   +        D   KAK++ET  L ++KLSP  NH SFSA  L T +M EN  HF
Sbjct: 128 FLHHLDIA-------DATAKAKHEETGMLLLQKLSPSPNHASFSALQLQTNAMTENCCHF 187

Query: 181 EPSSFPSPLM-EANLASFSSPSSAQLLFCP 208
           +P SFP PLM +AN ASFSSPS  QLLF P
Sbjct: 188 DPPSFPFPLMDQANPASFSSPSE-QLLFRP 208

[Close]

BLAST of Tan0017406 vs. NCBI nr
Match: KAG7019990.1 (Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.9 bits (694), Expect = 4.5e-69
Identity = 149/210 (70.95%), Postives = 166/210 (79.05%), Query Frame = 0


Query: 1   MISNLKQEGVQVQAKQMEGKRNRATSRQGASCVRGNPRIFKVSPLFGGKDRHSKVCTIKG 60
           MIS LKQEGV V+AKQMEGKR +  SRQG   +RGNPRIF+VSPLFGGKDRHSKVCT+KG
Sbjct: 131 MISKLKQEGVHVEAKQMEGKRKKGPSRQG-PFLRGNPRIFRVSPLFGGKDRHSKVCTMKG 190

Query: 61  LRDRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHFPKHFDPNVS 120
           LRDRRIRLSAPTAIQ+YDLQNRLGLS+PSKVIDWLI+VTRF+IDKLPPLHFPK FDPN S
Sbjct: 191 LRDRRIRLSAPTAIQLYDLQNRLGLSRPSKVIDWLIDVTRFDIDKLPPLHFPKDFDPNAS 250

Query: 121 ILHQSSVLLPQICHFDVAMKAKNQETDRLFVEKLSPLANHDSFSALP--TISMDENSSHF 180
            LH   +        D A KAK++ET  L ++KLSP  NH SFSAL   T +M EN  HF
Sbjct: 251 FLHHLDI-------SDAAAKAKHEETGMLLLQKLSPSPNHASFSALQLRTNAMTENCCHF 310

Query: 181 EPSSFPSPLM-EANLASFSSPSSAQLLFCP 208
           +P SFP PLM +AN ASFSSPS  QLLF P
Sbjct: 311 DPPSFPFPLMDQANPASFSSPSE-QLLFRP 331

[Close]

BLAST of Tan0017406 vs. NCBI nr
Match: XP_023001048.1 (transcription factor TCP13-like [Cucurbita maxima])

HSP 1 Score: 270.4 bits (690), Expect = 1.3e-68
Identity = 148/210 (70.48%), Postives = 165/210 (78.57%), Query Frame = 0


Query: 1   MISNLKQEGVQVQAKQMEGKRNRATSRQGASCVRGNPRIFKVSPLFGGKDRHSKVCTIKG 60
           MIS LKQEGV V+AKQMEGKR +  SRQG   +RGNPRIF+VSPLFGGKDRHSKVCT+KG
Sbjct: 8   MISKLKQEGVHVEAKQMEGKRKKGPSRQG-PFLRGNPRIFRVSPLFGGKDRHSKVCTMKG 67

Query: 61  LRDRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHFPKHFDPNVS 120
           LRDRRIRLSAPTAIQ+YDLQNRLGLSQPSKVIDWL++VTRF+IDKLPPLHFPK FDPN S
Sbjct: 68  LRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHFPKDFDPNAS 127

Query: 121 ILHQSSVLLPQICHFDVAMKAKNQETDRLFVEKLSPLANHDSFSA--LPTISMDENSSHF 180
            LH   +        D A KAK++ET  L ++K SP  NH SFSA  L T +M EN  HF
Sbjct: 128 FLHHFDIA-------DAAAKAKHEETGMLLLQKSSPSPNHASFSALQLQTNAMTENCCHF 187

Query: 181 EPSSFPSPLM-EANLASFSSPSSAQLLFCP 208
           +P SFP PLM +AN ASFSSPS  QLLF P
Sbjct: 188 DPPSFPFPLMDQANPASFSSPSE-QLLFRP 208

[Close]

BLAST of Tan0017406 vs. ExPASy TrEMBL
Match: A0A6J1C656 (transcription factor TCP24 OS=Momordica charantia OX=3673 GN=LOC111008784 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 3.2e-73
Identity = 142/192 (73.96%), Postives = 162/192 (84.38%), Query Frame = 0


Query: 17  MEGK-RNRATSRQGASCVRGNPRIFKVSPLFGGKDRHSKVCTIKGLRDRRIRLSAPTAIQ 76
           ME K RNRA+SRQ   C+RGNPRIF+VS LFGGKDRHSKV TIKGLRDRRIRLS PTAIQ
Sbjct: 1   MEAKIRNRASSRQEGPCLRGNPRIFRVSTLFGGKDRHSKVFTIKGLRDRRIRLSTPTAIQ 60

Query: 77  VYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHFPKHFDPNVSILHQSSVLLPQICHF 136
           +YDLQN+LGL QPSKVIDWLI+VTRF+IDKLPPL  PK FDPN S+L+QSS+LLPQ+CHF
Sbjct: 61  LYDLQNKLGLGQPSKVIDWLIDVTRFDIDKLPPLQIPKDFDPNASVLYQSSMLLPQVCHF 120

Query: 137 DVAMKAKNQETDRLFVEKLSPLANHDSFSALPTISMDENSSHFEPSSFPSPLMEANLASF 196
           DVA+KA+N  T+RL  +KLSPL NH S  +L + +MDE+  HFEPSSFP P MEAN  SF
Sbjct: 121 DVAVKARNGGTERLLAQKLSPLVNHASLCSLQSNAMDESFCHFEPSSFPFPSMEANPDSF 180

Query: 197 SSPSSAQLLFCP 208
           SS +SAQLLFCP
Sbjct: 181 SSSASAQLLFCP 192

[Close]

BLAST of Tan0017406 vs. ExPASy TrEMBL
Match: A0A6J1KPD9 (transcription factor TCP13-like OS=Cucurbita maxima OX=3661 GN=LOC111495302 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 6.3e-69
Identity = 148/210 (70.48%), Postives = 165/210 (78.57%), Query Frame = 0


Query: 1   MISNLKQEGVQVQAKQMEGKRNRATSRQGASCVRGNPRIFKVSPLFGGKDRHSKVCTIKG 60
           MIS LKQEGV V+AKQMEGKR +  SRQG   +RGNPRIF+VSPLFGGKDRHSKVCT+KG
Sbjct: 8   MISKLKQEGVHVEAKQMEGKRKKGPSRQG-PFLRGNPRIFRVSPLFGGKDRHSKVCTMKG 67

Query: 61  LRDRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHFPKHFDPNVS 120
           LRDRRIRLSAPTAIQ+YDLQNRLGLSQPSKVIDWL++VTRF+IDKLPPLHFPK FDPN S
Sbjct: 68  LRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHFPKDFDPNAS 127

Query: 121 ILHQSSVLLPQICHFDVAMKAKNQETDRLFVEKLSPLANHDSFSA--LPTISMDENSSHF 180
            LH   +        D A KAK++ET  L ++K SP  NH SFSA  L T +M EN  HF
Sbjct: 128 FLHHFDIA-------DAAAKAKHEETGMLLLQKSSPSPNHASFSALQLQTNAMTENCCHF 187

Query: 181 EPSSFPSPLM-EANLASFSSPSSAQLLFCP 208
           +P SFP PLM +AN ASFSSPS  QLLF P
Sbjct: 188 DPPSFPFPLMDQANPASFSSPSE-QLLFRP 208

[Close]

BLAST of Tan0017406 vs. ExPASy TrEMBL
Match: A0A6J1E7C6 (transcription factor PCF8-like OS=Cucurbita moschata OX=3662 GN=LOC111431389 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 4.5e-67
Identity = 147/210 (70.00%), Postives = 163/210 (77.62%), Query Frame = 0


Query: 1   MISNLKQEGVQVQAKQMEGKRNRATSRQGASCVRGNPRIFKVSPLFGGKDRHSKVCTIKG 60
           MIS LK EGV V+AKQMEGKR +  SRQG   +RGNPRIF+VSPLFGGKDRHSKVCT+KG
Sbjct: 8   MISRLKPEGVHVEAKQMEGKRKKGPSRQG-PFLRGNPRIFRVSPLFGGKDRHSKVCTMKG 67

Query: 61  LRDRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHFPKHFDPNVS 120
           LRDRRIRLSAPTAIQ+YDLQNRLGLSQPSKVIDWLI+VTR +IDKLPPLHFPK FDPN S
Sbjct: 68  LRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLIDVTRVDIDKLPPLHFPKDFDPNAS 127

Query: 121 ILHQSSVLLPQICHFDVAMKAKNQETDRLFVEKLSPLANHDSFSA--LPTISMDENSSHF 180
            LH            D A KAK++ET  L ++KLSP  N+ SFSA  L T +M EN  HF
Sbjct: 128 FLHLDIA--------DAAAKAKHEETGMLLLQKLSPSPNNASFSALQLQTNAMTENCCHF 187

Query: 181 EPSSFPSPLM-EANLASFSSPSSAQLLFCP 208
           +P SFP PLM +AN ASFSSPS  QLLF P
Sbjct: 188 DPPSFPFPLMDQANPASFSSPSE-QLLFRP 207

[Close]

BLAST of Tan0017406 vs. ExPASy TrEMBL
Match: A0A5D3BIQ9 (Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001450 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.4e-55
Identity = 127/200 (63.50%), Postives = 146/200 (73.00%), Query Frame = 0


Query: 1   MISNLKQEGVQVQAKQMEGKRNRA--TSRQGASCVRGNPRIFKVSPLFGGKDRHSKVCTI 60
           MIS LK++G   +AKQMEGKR +A   SRQG   +RGNPRIF+VSP FGGKDRHSKVCTI
Sbjct: 1   MISKLKEDGAHDEAKQMEGKRKKARTCSRQG-QFLRGNPRIFRVSPFFGGKDRHSKVCTI 60

Query: 61  KGLRDRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHFPKHFDPN 120
           KGLRDRRIRLS PTAIQ+YDLQN+LGLSQPSKVIDWLI+VTRFEIDKLPPLHFPK FDPN
Sbjct: 61  KGLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPN 120

Query: 121 VSILHQSSVLLPQICHFDVA-MKAKNQETDRLFVEKLSPLANHDSFSALPTISMDENSSH 180
            SILH S +        D A MKAKN+ETD+  +              + T  ++ +SSH
Sbjct: 121 ASILHHSDI------GGDAALMKAKNEETDQTLL--------------VQTNDINGDSSH 179

Query: 181 FEPSSFPSPLM-EANLASFS 197
           FEP SFP P M + N + FS
Sbjct: 181 FEPPSFPFPFMYQTNSSPFS 179

[Close]

BLAST of Tan0017406 vs. ExPASy TrEMBL
Match: A0A1S3BEN2 (transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103488791 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.4e-55
Identity = 127/200 (63.50%), Postives = 146/200 (73.00%), Query Frame = 0


Query: 1   MISNLKQEGVQVQAKQMEGKRNRA--TSRQGASCVRGNPRIFKVSPLFGGKDRHSKVCTI 60
           MIS LK++G   +AKQMEGKR +A   SRQG   +RGNPRIF+VSP FGGKDRHSKVCTI
Sbjct: 1   MISKLKEDGAHDEAKQMEGKRKKARTCSRQG-QFLRGNPRIFRVSPFFGGKDRHSKVCTI 60

Query: 61  KGLRDRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHFPKHFDPN 120
           KGLRDRRIRLS PTAIQ+YDLQN+LGLSQPSKVIDWLI+VTRFEIDKLPPLHFPK FDPN
Sbjct: 61  KGLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPN 120

Query: 121 VSILHQSSVLLPQICHFDVA-MKAKNQETDRLFVEKLSPLANHDSFSALPTISMDENSSH 180
            SILH S +        D A MKAKN+ETD+  +              + T  ++ +SSH
Sbjct: 121 ASILHHSDI------GGDAALMKAKNEETDQTLL--------------VQTNDINGDSSH 179

Query: 181 FEPSSFPSPLM-EANLASFS 197
           FEP SFP P M + N + FS
Sbjct: 181 FEPPSFPFPFMYQTNSSPFS 179

[Close]

BLAST of Tan0017406 vs. TAIR 10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 )

HSP 1 Score: 137.9 bits (346), Expect = 9.4e-33
Identity = 67/101 (66.34%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 16  QMEGKRNRATSRQGASCVRGNPRIFKVSPLFGGKDRHSKVCTIKGLRDRRIRLSAPTAIQ 75
           Q +   + ++SRQ  S  R NPRI +VS  FGGKDRHSKVCT++GLRDRRIRLS PTAIQ
Sbjct: 32  QQQQPSSVSSSRQWTSAFR-NPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQ 91

Query: 76  VYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHFPKHFD 117
           +YDLQ+RLGLSQPSKVIDWL+E  + ++DKLPPL FP  F+
Sbjct: 92  LYDLQDRLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFN 131

[Close]

BLAST of Tan0017406 vs. TAIR 10
Match: AT5G08070.1 (TCP domain protein 17 )

HSP 1 Score: 131.3 bits (329), Expect = 8.8e-31
Identity = 81/174 (46.55%), Postives = 103/174 (59.20%), Query Frame = 0


Query: 36  NPRIFKVSPLFGGKDRHSKVCTIKGLRDRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWL 95
           NPRI +VS  FGGKDRHSKVCT++GLRDRRIRLS  TAIQVYDLQ RLGLSQPSKVIDWL
Sbjct: 21  NPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVIDWL 80

Query: 96  IEVTRFEIDKLPPLHFPKHF---DPNVSILHQSSVLLPQICHFDVAM---------KAKN 155
           +EV + ++D LPPL FP  F   +PN++ L +S    P +  FD+           K K 
Sbjct: 81  LEVAKNDVDLLPPLQFPPGFHQLNPNLTGLGES---FPGV--FDLGRTQREALDLEKRKW 140

Query: 156 QETDRLFVEKLSPLANHDSFS--------ALPTISMDENSSHFEPSSFPSPLME 190
              D +F      + +H+ FS          PTI+   +S H+        L++
Sbjct: 141 VNLDHVF----DHIDHHNHFSNSIQSNKLYFPTITSSSSSYHYNLGHLQQSLLD 185

[Close]

BLAST of Tan0017406 vs. TAIR 10
Match: AT3G02150.1 (plastid transcription factor 1 )

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27
Identity = 67/130 (51.54%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 7   QEGVQVQA---KQMEGKRNRATSRQGASCVRG-NPRIFKVSPLFGGKDRHSKVCTIKGLR 66
           QE  +V+A   K +  K+  + S   +S ++  +PRI +VS  FGGKDRHSKVCT++GLR
Sbjct: 29  QEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLR 88

Query: 67  DRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHF-PKHFDPNVSI 126
           DRR+RLS PTAIQ+YDLQ RLG+ QPSK +DWL++  + EID+LPPL   P++F  ++  
Sbjct: 89  DRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENF--SIFN 148

Query: 127 LHQSSVLLPQ 132
            HQS + L Q
Sbjct: 149 HHQSFLNLGQ 156

[Close]

BLAST of Tan0017406 vs. TAIR 10
Match: AT3G02150.2 (plastid transcription factor 1 )

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27
Identity = 67/130 (51.54%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 7   QEGVQVQA---KQMEGKRNRATSRQGASCVRG-NPRIFKVSPLFGGKDRHSKVCTIKGLR 66
           QE  +V+A   K +  K+  + S   +S ++  +PRI +VS  FGGKDRHSKVCT++GLR
Sbjct: 29  QEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLR 88

Query: 67  DRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHF-PKHFDPNVSI 126
           DRR+RLS PTAIQ+YDLQ RLG+ QPSK +DWL++  + EID+LPPL   P++F  ++  
Sbjct: 89  DRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENF--SIFN 148

Query: 127 LHQSSVLLPQ 132
            HQS + L Q
Sbjct: 149 HHQSFLNLGQ 156

[Close]

BLAST of Tan0017406 vs. TAIR 10
Match: AT1G30210.1 (TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 )

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-21
Identity = 73/185 (39.46%), Postives = 99/185 (53.51%), Query Frame = 0


Query: 8   EGVQVQAKQ-MEGKRNRATSRQGASCVR--GNP--RIFKVSPLFGGKDRHSKVCTIKGLR 67
           E +++Q  Q  + ++ +  S      +R   NP  RI +VS   GGKDRHSKV T KGLR
Sbjct: 5   EDIELQKHQEQQSRKLQRFSEDNTGLMRNWNNPSSRIIRVSRASGGKDRHSKVLTSKGLR 64

Query: 68  DRRIRLSAPTAIQVYDLQNRLGLSQPSKVIDWLIEVTRFEIDKLPPLHFP-KHFDPN--- 127
           DRRIRLS  TAIQ YDLQ+RLG  QPSK ++WLI      I  LP L+    H D N   
Sbjct: 65  DRRIRLSVATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPLLNTNFDHLDQNQNQ 124

Query: 128 -----VSILHQSSVLLPQICHFDVAMKAKNQETDRLFVEKLSPLAN-HDSFSALPTISMD 178
                 S   +SS+L   +   ++  KA+ +  +R   ++   L N H SF+ L T   D
Sbjct: 125 TKSACSSGTSESSLL--SLSRTEIRGKARERARERTAKDRDKDLQNAHSSFTQLLTGGFD 184

The following BLAST results are available for this feature:

BLAST of Tan0017406 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FME3	1.3e-31	66.34	Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1	[more]
Q9LEZ9	1.2e-29	46.55	Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1	[more]
Q9S7W5	1.7e-26	51.54	Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1	[more]
Q9C758	1.8e-20	39.46	Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1	[more]
Q93V43	7.5e-19	60.26	Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1	[more]

BLAST of Tan0017406 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137286.1	6.7e-73	73.96	transcription factor TCP24 [Momordica charantia]	[more]
KAG6584403.1	1.5e-69	71.43	Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023519980.1	3.4e-69	70.95	transcription factor TCP13-like [Cucurbita pepo subsp. pepo]	[more]
KAG7019990.1	4.5e-69	70.95	Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023001048.1	1.3e-68	70.48	transcription factor TCP13-like [Cucurbita maxima]	[more]

BLAST of Tan0017406 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C656	3.2e-73	73.96	transcription factor TCP24 OS=Momordica charantia OX=3673 GN=LOC111008784 PE=4 S...	[more]
A0A6J1KPD9	6.3e-69	70.48	transcription factor TCP13-like OS=Cucurbita maxima OX=3661 GN=LOC111495302 PE=4...	[more]
A0A6J1E7C6	4.5e-67	70.00	transcription factor PCF8-like OS=Cucurbita moschata OX=3662 GN=LOC111431389 PE=...	[more]
A0A5D3BIQ9	1.4e-55	63.50	Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BEN2	1.4e-55	63.50	transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103488791 PE=4 SV=1	[more]

BLAST of Tan0017406 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60970.1	9.4e-33	66.34	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT5G08070.1	8.8e-31	46.55	TCP domain protein 17	[more]
AT3G02150.1	1.2e-27	51.54	plastid transcription factor 1	[more]
AT3G02150.2	1.2e-27	51.54	plastid transcription factor 1	[more]
AT1G30210.1	1.3e-21	39.46	TEOSINTE BRANCHED 1, cycloidea, and PCF family 24	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 48..125 e-value: 3.0E-24 score: 86.4
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 48..106 score: 26.560032
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR31072:SF119	TRANSCRIPTION FACTOR TCP17	coord: 5..130
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 5..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0017406.1	Tan0017406.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding