Tan0017388 (gene) Snake gourd v1

Overview


Name	Tan0017388
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	nucleolin 1-like isoform X1
Location	LG04: 83128395 .. 83138379 (-)
RNA-Seq Expression	Tan0017388
Synteny	Tan0017388

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTCATTTTTAATTTTTTTCTTCTGTTCATCTCAAATCGCTCTCCCTCAGCCATGTGCTCTGATGAAATCCGCGCTCTGTTGATTTTCTGCGTTTAATTTCCAGCCTCTTCCCTGTTAATCGGTTTCTCTGTCCAGTTCACAGGATTCGGTGGAACCGGCTAGGGTTCATGGAAGCTGCAATTCGAGAGCTCAATATTTGAGGGTTTGAATATATCAATTTAACTCCGGTGTTAAGTCTTAAGAGTGAGCGTTCGGCGTTCTGGATTGTGGAGCTTTTTGGAAAAAGAAAAGACGCGTCGGAGATGGGGAGTGAGGATCGTGTCGATGATCGGACGTTCAAGGTTGATTTCAGTGGCGAGGGAATGGCCAAACTCAGAGAGAGGATAAAGCTGAAAATGAAGGAATTCATGGGCGATTATACGGACGACACTCTTGTGGTACGGACTTGCCTAGCCTTTTAACATTCATGTGCCTGAGAGGTTTCTGCGAAGCAATGAGATTATCGTGTTTTGTAACGAGTCTGCCTGGGAGTCTTAGAAATTTTTTTAGGTTAATCGTTATTCACGTGGTGACCATTTTGTTATTCTTAATTGGCTGTTGAGGAATATGTTTGGTTCAAGAAATGGAAATGTAGCAATCGCCGGTTGTTTATATGTTTCGCTAATGCGGAGTGAAAAAAAAAATTGTTCTGATTCTTTATCTTTAAATTATTAAGTGCCTGAGGCGATTTTTCTCTTATTGACTAAGAAATTCGTGAAACGTCGAGATGGTTGATATCTAATAAGATGTATTCCAACTCAATGCCATAAATTATCCTTCATCCAAAGCAGACTCCATCTTTTAATGTGATATCTAATAGCCTGTTTAAGATTTTGGTTAGCCGTCATCCTCTTTATCTGTCCGCCCCTCTTTGTAAGAATCTCCCTGAGCTAGGTGAACTTGCAACCTGAACCGAGTTTATTCGTTTGGTTTTTGATGGTTTGCTGTTTCCATTTTTCCTCGATAGGAAATAAGTACATTGATTTAATGAAATGTACTAAAAGGTAGAATCTAATTAGCATAAAAAGAAATACTTGAAGTTGCAGAATAGCCTATTACTCCCAAATGTGATGATTAGAAGAACGTTGTCCTAAGATTACTAAGAAGAGTTGGCAATAATCTTGTAGAGGCAAAAGATTGAGATCGAGCTAATTGGATGATAATCTTTCATAGTCTTTGCATTAGGTTTCTTTGTTGAGGGATGTTAATATCATTCTGAAAAAAGATCTTGGAATACTCGTAATATCTTCCTTGAGAACGTTTCAAGAGTTCTAAAAGAATTTAGTTGTTTGAGCTTTTTTACTTCCCAAATCTGAGATAGCTTGAATAATTTTGTCTAACCCTAAAGTTAGCCTTTATCTAAAGCAATCATTGGGGCCTCTAAGCTTGGGACCCAATCTGGACTGGTTGGCATAAATTTTACGTCTTCTTTCTCTGTGGATCTTGGAGAAAGCAAGAATGAAGAAATTCCTTTTCAACGTGTGGAAAGAGCTACTGTTATATTCTTCTCCTTTTCTTGATACGTCTCCTCATGTGAGCTGTGTGATTTGTATCTTCACATCCAAAAGTTTCTCTTTCCAAATTAGATCTTTGAGTTGGGATTTGAGATTAATTTTAGAAGACCGTTTGGTTGCATCAAGGAGGGAAAAGCATTGCAACTGGTCTAGAGCTTTGGGATCAACACGAATTTCAGCTATTCTGAAGGTTCTGTCATTTCAACAAGCTTTTTCGTCTTCTTTAATCTGCAAATAAAACCATACCACAGCCAACCCTCAAGATTAGAGTAGAGTTCCACCAACTTTTGGAAGTTTTTGAGGAATTGTTGTGCTCGAGCCACACTTATATGAATTTTAAAAAGGCAGGATCTCGTTTGATACCAGAAGATTTTAGAAGTCATTTAGCTTTTGGAGGTAGGCCTTTCAATGTGTTTAACTTCGGAATTGGAGATTTAGAGGAGCCAATCATGGGATCAAGTTAACTTGGCACTGTTTTGAGGGATATAAATGGAGGAGAGGTTTTCAATAGCCTTGTCAAATAGCTTCATGCTTTTGGTGGGGCTTTTGGAGGTGCATTTCTCCCAACTCCTTTAAGAGATATTGAAGCCTCTTCTTACTCCATTAGCCATGGCAATGGCACCCAAGATTTTCCAATTTCCTAAAAAAGAAACCTGTATATGGACATCTTGAGAGGGGCCATAAGTGTTGAACAACCTGAAAAGAAGAAAAAATTAGCAGAAAAAAACCTGATGCTTTAAGAGAAAGGTGGCAGCCATAACAAAGGCACCCAAGATTTCCCAATTCTCTCCATTTTTTTTTTTTGATATGGACATCTTGAGAGGGTCCATAAATATTGGAAAGCCAAAGAAGAAGAAGGAGGAGAAGATGAAGTTGAGTCAATATCTATCTATAGAGGTCCAATTAGATTTGATAATCTTTTGATTTGTACAAGGAAGCTATCATAGGATCATGGTTCCAACTTTTAAGCTTCTTACGTTCCTGCAAAGTACATTCCTGGGTAAGCAACATGAGGCTTTTCATTTTCTAAGTGTTCTTTTTTAGAATAAATGAGCTTTTATTGAGAAGAAATAAAAGAATACAAGGGCATACAAAAAAGAGAACCCAAAAAAAAAAGGGAGAGGCGACCTACAAGAAAGGCCTCCGGTCAAGTAAAATAAGACCTAAAGTATAATGACAAAAAGGTTTTGCCACTGAAGTCCATAAAGAATACAAGGGTGTCAACTAAGTGCTTTTCTTAGTTGATAGAAGACATAAGGTTTGAAATCCATCTGATTCTTTTCTCTTCTTCCCCACTCCTTGGATTTTCTTATGTGGGAGGGAATAGGAAAATGCAAGAATTTAGAGTTTTCATCAACCCTTCAGCCAAATTGTTATCGTGAAGAAAGCCATGGGTATTAGAACATAATGGGAAGGCCGAGAAGAAACTGCTTGGGGGGGGGGGTCGATAAAAGGTTGTCCCCACTCCCCACCAGTCTGGAGGGGTTGCAACATCTCCTCTTTCAAATAAGGGTAGAAAAATAGTTTTAAGAGGGAGAAAGAACAAGTTGAGTGGGGGAGGTAGGCAATTGCTAAATGGTGAAGGGAGTTTTTTTCTAAAAAAAAAAAAGTTGAGAGGATTGGATCTTTCAAAGAGAGGGCTGGTTGCTTTCTAATCCAAAAGACTTCTCAAAATTCGAGGGATGTATAGTCTCATCAATTAAGGTACCATTTTCATGTTTTTCTTCCGTTAGTTTGTGATAAGATGGTACTTAGAAGGGTAAAAATGTTGAGTATGAATTGCACGTTAGGAATGTAGAGCAAGGACGAATGCTTGAGAGGATTCGATATCAATGGTTGCAACTCGAGATATAACCATGGTCTTTAGCAACTTTTCTTGACCCTAGACTTAGTATCATAGAAAGGGGCAACTTGAACAACATTTGGATCACAGATAGAGTTGTGATTCAACTTTTATGAAATCTTCCATGAGATCCAATATCTGAAGTTCTAGTGGCAGAATTGAGAAATTCTCCACACAATGAAAATGCCTACAGAAGAATAAAAACTTCATTGGTTTAGGGGCACATTTATAATTTTTATCCGTCCCTTTCAATTCTTGGAATTGCAGAGAAAGTTGTTTGGTCCACCCTTTTGCATCTGAGCTTGGATCTATTAACTTGGCCATAGCGGGGCCGCAGTATTTTAAAAAGCCCTCCGAGCGCAACTTCAGCGCCTCGCCTCAAAGAGGCGAGGCGCATCTAAGAAGGCGCGCGCGAGGCGCGCGCCTTCCATGAAGCCCTCAAGGCGCGCGCCTCGGGGGCTTCTTCAACTTTTTTTTTTTTTTTTTCGTTTTAGAGCCTTGAGACGTTTAAAACATAATAGAGCCTAAATGATTTGGTGTTCATAAAATATAATAGAGCCTTGAGACGTCGATATAGCATTCGAGATGTCATTGACCCCATTTCTTTAAAAGATATTGATGATAGTAATGAGTGGTTGATTGGAAGAATGAATGATGATTCTGAAGAAGATAATGATCTTGTCTTCGATAATGATTCTTTAACACGGGGTGATGTTTCAAGAGTTGCTGGAGCAAAAGAACCTGCACCTGCCTACTATTCTAGAGCTAAATCAAGAACCAAGAATAATGCTTCATGTTCATCCTCCACGTCCACACAACCATTGCCACGAGATCCACAACCTATGCCCCCACCTGTTAACTTGGATGACTATAAGAATGAGACTGATGGAGAAGATACAGATGGCTATATGTCCAATGATGAAGAGAATGCGGTTGAAGAAGAAGATCTATTTTGTAATTGAAGAGGCTTTTGATCTTGTAGTTTTTATAATTTATTAGTGTTGTATTGTAATTGTTTCATGTTTTTTAATAGAGTATCTATTGTCTCTATGTTCAAACATTAATACTTGAAAGTTGAACCTTATTTATTTTACTTATTTTTCTTGGTTAAAACTTAATTTCATCCCATGAAGGGTTTTTTTCTTATTGTGTATGTATACATATATATTTTATATTTTTTTTATATATAGTGCGCCTTAGATAAAAAAGCCCGCGCCTTTTGGTGCGCCTTGCGCCTAGGCTCCAGAGGGCTATTGCGCCTTAGTGCGCCTTGAGCCTTTAAAAACACTGTGGGGGCTAGTTAACTCTTGGCGAGTGGTGAGGGTTTCACACCAGTTTAAGAGTTTTCTTCAAACCACACAAGAGATATTCGTCTTGATAAAGAGAATTCCATCTTTGAAAGAGCATTAACCATGTTTTAGTAACCTTGCTATTTTCTTTTGACCTTTCTATCATCTCAATACTCTTCTTTCTTTACATTCTTTTGAAGATTACATTTCCATTGATCTTCACTTTTCCAATTTCCATGGTTTTAAACTATAAGAAGCATGGACACTTTAGTTTGACTAACATGCTCGTGTCTGACACTTACTGAGACTTGGTAGCACATAGATATTTCAAATCCTTTAGACCCTAGTTGTATAAAGTTAATATGGGTCCAATATTTATTGGACACTTATTGAGCAAAATACCAAGAAATTTTTCAATATTCTATTCTTTTTTTTTGGAATCTAGAGGCTTTTACTTGCAGTGTAGTGCACGTTTGAGTCACCTTAAATAGAGGGCGTTTTAAAAATAATTGGTATTGATGGGCTCCAGTAGGAGTTAGATATAATTTACTTCAGGTATCTTTGAGGGCTTCATGGGTTTTCGTATGCTGTGAATACTAGGTCGTTCATCTTACTGTCTTGGTGCTAGAGAGAGAAAGGCAATTGGGAAACTAGTTTATAAATCAGAATGCTTGAAAATTTATTGTGAGATGTTGGCATTTATTTAAGTGATGTGAAATTGTTTAGCCTTTGAATATCACCCTTTTTCCTCAAGTGGTGCTGCATGAGATTGTGAAAACTTTCTTTAATGCATCTTTTGTTTTAATTCGGCGTTATACTTGTGTATTTTTCATATGCATTTTTGCCTGTGTTTAAATTGTTTCCATGTTTCATTTTTTATATTAATCATAATGTGGTTTCTAATTTACTTCAATAACTGGGATTTAGAGCTTCTGTTTGAAGAGATCAAGTTTTATTGAATTTAATTAATGTTCTTTTGGGTAGGAATACGTGATTGTCTTGTTGAGGAACGGAAGGCGCAAAGAAGAAGCACAGAATGAACTAAACGTATTTTTGGCGGACGATAGCCATTCTTTTGTATCTTGGTAAGTTTACTCTCGTTCTTCCTCTTGCTTGTATTTGTAATTTGGGTAGTAACTCGTGTTGAGTCATTCTTGCAGCACGTTTGACTAATTGTTTTATAAGCTTCATTTCAACAGGCTTTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGAACCGCCTACTAAACCTTCTGCCAATGAAGTGCCCAGACCGAAGTCTCCAACAGCAGAACCAGATAGAATAAATGGTTCTCACAATCTTGAGTCTGATTTAGAAAGAGGGAAGTCTGAAAAAGTATCTATCAGGCGGCGTAATAGGGAATGGAAAGGAATTGCTAATGATGAAACCCGTGTTACTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGCTCCTAGTCATAGGAAAAGAAGCCGTGCTGATGAGCATCAAGGCACTGAGGTCCGTGATCTGACCTTCCTCTTCTAATTTAGTACCTAGCAGCAGTTAACTGGGTTTTAGAATGTGAAAGTTGAATTAGTGAAATGGGTGGAGGTTTCGTTGAACAATATCCTGTTATTTCTCAGTTTGCAATTTTAGGAACCCCACAATTTTATTTTTGTTTAAAACTGCATGTTTTATGAGCGTGTCTTGTTTTTCTGACCATGTGTGAACTCTAATTTCTTCTCCTTGCCATGTCAATATGGCTATGTTTAAATTCAGTTTTTTTTTTTTTGGTAATTGGATTTTGATAATTGTATGATGGGAAGATAATGATCAGTGCTGCAGTTTCATCTTATTCATATAAATGGATAAACCAGAAACAGGAAGTATTGCTACATTTCTCGCTCACTGTACTTTCTAAAATGAATTTTGTGACAATGAAGGATGCTTGATTAATTTTTGTGTCTTTTTTGTGCAATAATTTGAATGCTCTACTAAACTACCTAAGTTTTGATAGTTTTAGTCATTGAAAATAACTCGGTCCAGAATATTGGATGGTTTATTAATGCATTATCCAATGGAAAACAAATTCTCATGTTTCGTGTTTTGCAGAGGGAGGCAGCCTTTCAGGTAAGCATCGCTGCCCCTCGGCGGCTGCTCCAGTTTGCGATGCGAGATGCTGTGGCCACCACAAGGCCCTCTAGTGCAGCTAAGGAACCCCTTTCGAAGCGTCTCCGTTCGGTAGTTTCTACATCCAATAGTGACACAACTAATCGTCCTAGGCGGCTTCAATCTGTTGCAAAAGTGCCAAATCCTATGGCAACTGTTATTAAGGCTGTTTCGGAGGCAGCTGAAGATGCGATAAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCTCGTGATATGGATTTAACAGAGGCCAGTGGCCAACATGCAGAATATGGAGTAACTGCCGTAGAGGACCATAAATATGGGGATATGAATCATACACAGGATCGACCTTACTCAGCCACTTATCTCAGAAACAATTATAGTGGGAAATATGCTCCCAATGAGGCCTTGTTTGAAGCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAGTGAAGATGTTACTATTCAGGGTCATAGAGTATTTGACGATTCTTGGACTGCAGAATCAGGAGTAAGAAAGGGAGGCAATTTGCGGACTGCGCCATTCAGGGTAGTTGAGAATGCTGATGATGAACGCATGACACAATATAATAAGCAGAAGGATCAACCTTCCTTAGTTGCAAATTCCTCACGCGACATTGTAAATATCTCTGTGAATGTTAATACTTGGAAACCACCTCACTATCAGGACCCAGGGCAGATTGCTGAACTTGGTGGTAAAAAGTTTTTGCAGGAGAGTGAGTTACGAGGTACCAGATCTGCTGTGCATGTAACAGAGAATGGCGAGCCAGTCACTATTGTTAACCAACAGAAAAAGCCTGCAGCAAACCTTCAAAAAGAGTTCCAGAAACCTACTTTATCTGCTAATGGTGGGCTTTCTTTTCTGGTGTCTGGCTCTACTATTTAAATGATAATTAGTTTGTACATGCTTTTGTTTATTTCTTCTTCTTTCTAAGTGTGAGGTTTCTCCTCCTATTTTTTTCCCGTATTTGATTATTGACAATCCGTTATCATCCTGGGCTCTTACTTTATTATTCTACCGTGGTTTTTTCATTCTAAATAATTTTCTCATGTTACCCTGTGCAGGCCTTGCTGCCACTCGTCCCTTAGAGGACGCTGATGCTCGAACCATTTTTGTTAGCAATGTAATAAGTCTCTCTTTTGTGGCTTCTATGACCTTACGTTAGCAATGTAAAACTGGTGGCTGTTCATCACCTTACGTTAATTTTCACGTACAGGTTCATTTTGCTGCTACAAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAGATTGTAAAAGTCATCATTGTAACCGATGCAACCACCGGCCAACCCAAAGGGTAAGGCATCACAATTGTTTATTATACCTCAGCTATCTCTTTTTGTTATCTCTACTGCAGACAACAAATTTTCCTACATTACTTTTTAATAAATCAAGGGATGCGATTGGAGCAGGTCGGCCTATGTGGAGTTCATGAGAAAAGAAGCTGCAGAGAGTGCATTGTCTCTTGATGGGACCTCGTTTATGTCTAGGATTCTGAAGGTACCTGTCTTATTTCTGACATTTTGCTTGTAGTATGAATCATCACCCAAAGAAAAAAATGTTTGCAAACTTAACCCTTTTAGTTTTTTTAGTTTTTTTTCCTTCAAGTCCTGTAGTTAGCATTGGCATCTTAAATGTGTCCTTTTTGTTTTTTTGGGTTCGGAAGATGTGTGGGCCAGTTCACAATCTCAAATATATACTTTGTGGGCCTTGTTTAATGACATTTTTTATCTTTTCTTTTTTAACTGGATTGTTTTTCAAGTTTATGGTTTCTTTTCACATAATCAGTGAATTTTTACTGGTGTTTCCATGCTTAACTATGCAGAGAGCGAAAGTTAACGTAATGAAATGGTTTGTTATAAAGGAAAAAAAAAGAAACGACAGTGGACATCTAGAAGCAAACAGAGAAAATGTACAGGCTCCTTTCAGTTTTGGGCTGCCGTATGTTTAGCCCACTTTTGTTCTTTCATTTATCTTAATGAAAGTTTGGTTTCTCATCAAGAAAAATGTTCAGGAATCTTGGCTGTATTTGGTTTTAACTTGCTCTTCCACTGGTATTATAATTGTAACATTTTTATCTTGATGCCAAAACCATACCCCACAAGACACTACTAGCACCATATGTTTTAGTCAAGTAACGCACTGTGTCAGATTGATTAGAACCCAGAGTTTGTTGAGGTGTCTGCTGCATAATGTAGTCAAAGAATAAAGCTGCATGTTTGATTAATTTGTCTATGCAGGTCGTAAGGAAAAATGCGTCACAATCAGAAGGTGTTTCAATTGTCGCCTGGCCTCGTGCTGTGCGTGGCTCACCATATCCTACTCCCAGATTTACCAGAGTTCCTTTCCCGAGGGGCGTTCCCGGTGGATTTAGGCCTCGTCCCCCCATCAAACTTGGTGCCAGGAGCATGCAGTGGAAGCGGGATAGTCAGACCACAAATGCTGACAATGGTGCTTCTGTCTCTGGTAATTCTGTACCCTCATCTGGTGCTCGTAGTCTCACCTATGTTCGAACAGAATCTAAGCCGGCGGACAAGTAGGAACCACTTGATTGAGAGAGTTGTTCTCTCCTCAAGGATTTGCTCAAAATTATTATGCGAAAAGAGAATCACGCAGATCAAGTATGACCTCCACAAATTGTTTGTTTGATTTTTTTGGTGGTTCATGATTCTTCGTGCATCATGGTGGAGGAAACTGAGAAAGAAGACCACGGGAAGTTTTAGCAGTTTCTAGGAGAAATATAATTTTTGTTTCCATCGGGGAATGGAAATTGGTGAGTTTATAGCTAGGAAACTCATAATGGCGGTTCGGATGATTTCATATTTTTGAGCTCCCCCTCCCATTCAGAATTCTTATTCAGTTACTAGATTAAAATTTGTGAATAGAGTAAGAGTAGACGTTTTGTTTTTTGTTTAACGGATATTATGATATTTTGTAATTTTTATTACTGATGTGACAGAAGAGAATGAAAAAAAAGAAAAATAGAGTTACATGAAAAGAAAATGAATAAATTTTACCTAGTTTGTATATCAGCAGGTCTTTGTACCAGTTTATAAGCATGTTTTTACCTAGTTTGA

mRNA sequence

ATTTTTCATTTTTAATTTTTTTCTTCTGTTCATCTCAAATCGCTCTCCCTCAGCCATGTGCTCTGATGAAATCCGCGCTCTGTTGATTTTCTGCGTTTAATTTCCAGCCTCTTCCCTGTTAATCGGTTTCTCTGTCCAGTTCACAGGATTCGGTGGAACCGGCTAGGGTTCATGGAAGCTGCAATTCGAGAGCTCAATATTTGAGGGTTTGAATATATCAATTTAACTCCGGTGTTAAGTCTTAAGAGTGAGCGTTCGGCGTTCTGGATTGTGGAGCTTTTTGGAAAAAGAAAAGACGCGTCGGAGATGGGGAGTGAGGATCGTGTCGATGATCGGACGTTCAAGGTTGATTTCAGTGGCGAGGGAATGGCCAAACTCAGAGAGAGGATAAAGCTGAAAATGAAGGAATTCATGGGCGATTATACGGACGACACTCTTGTGGAATACGTGATTGTCTTGTTGAGGAACGGAAGGCGCAAAGAAGAAGCACAGAATGAACTAAACGTATTTTTGGCGGACGATAGCCATTCTTTTGTATCTTGGCTTTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGAACCGCCTACTAAACCTTCTGCCAATGAAGTGCCCAGACCGAAGTCTCCAACAGCAGAACCAGATAGAATAAATGGTTCTCACAATCTTGAGTCTGATTTAGAAAGAGGGAAGTCTGAAAAAGTATCTATCAGGCGGCGTAATAGGGAATGGAAAGGAATTGCTAATGATGAAACCCGTGTTACTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGCTCCTAGTCATAGGAAAAGAAGCCGTGCTGATGAGCATCAAGGCACTGAGAGGGAGGCAGCCTTTCAGGTAAGCATCGCTGCCCCTCGGCGGCTGCTCCAGTTTGCGATGCGAGATGCTGTGGCCACCACAAGGCCCTCTAGTGCAGCTAAGGAACCCCTTTCGAAGCGTCTCCGTTCGGTAGTTTCTACATCCAATAGTGACACAACTAATCGTCCTAGGCGGCTTCAATCTGTTGCAAAAGTGCCAAATCCTATGGCAACTGTTATTAAGGCTGTTTCGGAGGCAGCTGAAGATGCGATAAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCTCGTGATATGGATTTAACAGAGGCCAGTGGCCAACATGCAGAATATGGAGTAACTGCCGTAGAGGACCATAAATATGGGGATATGAATCATACACAGGATCGACCTTACTCAGCCACTTATCTCAGAAACAATTATAGTGGGAAATATGCTCCCAATGAGGCCTTGTTTGAAGCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAGTGAAGATGTTACTATTCAGGGTCATAGAGTATTTGACGATTCTTGGACTGCAGAATCAGGAGTAAGAAAGGGAGGCAATTTGCGGACTGCGCCATTCAGGGTAGTTGAGAATGCTGATGATGAACGCATGACACAATATAATAAGCAGAAGGATCAACCTTCCTTAGTTGCAAATTCCTCACGCGACATTGAGAGTGAGTTACGAGGTACCAGATCTGCTGTGCATGTAACAGAGAATGGCGAGCCAGTCACTATTGTTAACCAACAGAAAAAGCCTGCAGCAAACCTTCAAAAAGAGTTCCAGAAACCTACTTTATCTGCTAATGGCCTTGCTGCCACTCGTCCCTTAGAGGACGCTGATGCTCGAACCATTTTTGTTAGCAATGTTCATTTTGCTGCTACAAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAGATTGTAAAAGTCATCATTGTAACCGATGCAACCACCGGCCAACCCAAAGGGTCGGCCTATGTGGAGTTCATGAGAAAAGAAGCTGCAGAGAGTGCATTGTCTCTTGATGGGACCTCGTTTATGTCTAGGATTCTGAAGGTCGTAAGGAAAAATGCGTCACAATCAGAAGGTGTTTCAATTGTCGCCTGGCCTCGTGCTGTGCGTGGCTCACCATATCCTACTCCCAGATTTACCAGAGTTCCTTTCCCGAGGGGCGTTCCCGGTGGATTTAGGCCTCGTCCCCCCATCAAACTTGGTGCCAGGAGCATGCAGTGGAAGCGGGATAGTCAGACCACAAATGCTGACAATGGTGCTTCTGTCTCTGGTAATTCTGTACCCTCATCTGGTGCTCGTAGTCTCACCTATGTTCGAACAGAATCTAAGCCGGCGGACAAGTAGGAACCACTTGATTGAGAGAGTTGTTCTCTCCTCAAGGATTTGCTCAAAATTATTATGCGAAAAGAGAATCACGCAGATCAAGTATGACCTCCACAAATTGTTTGTTTGATTTTTTTGGTGGTTCATGATTCTTCGTGCATCATGGTGGAGGAAACTGAGAAAGAAGACCACGGGAAGTTTTAGCAGTTTCTAGGAGAAATATAATTTTTGTTTCCATCGGGGAATGGAAATTGGTGAGTTTATAGCTAGGAAACTCATAATGGCGGTTCGGATGATTTCATATTTTTGAGCTCCCCCTCCCATTCAGAATTCTTATTCAGTTACTAGATTAAAATTTGTGAATAGAGTAAGAGTAGACGTTTTGTTTTTTGTTTAACGGATATTATGATATTTTGTAATTTTTATTACTGATGTGACAGAAGAGAATGAAAAAAAAGAAAAATAGAGTTACATGAAAAGAAAATGAATAAATTTTACCTAGTTTGTATATCAGCAGGTCTTTGTACCAGTTTATAAGCATGTTTTTACCTAGTTTGA

Coding sequence (CDS)

ATGGGGAGTGAGGATCGTGTCGATGATCGGACGTTCAAGGTTGATTTCAGTGGCGAGGGAATGGCCAAACTCAGAGAGAGGATAAAGCTGAAAATGAAGGAATTCATGGGCGATTATACGGACGACACTCTTGTGGAATACGTGATTGTCTTGTTGAGGAACGGAAGGCGCAAAGAAGAAGCACAGAATGAACTAAACGTATTTTTGGCGGACGATAGCCATTCTTTTGTATCTTGGCTTTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGAACCGCCTACTAAACCTTCTGCCAATGAAGTGCCCAGACCGAAGTCTCCAACAGCAGAACCAGATAGAATAAATGGTTCTCACAATCTTGAGTCTGATTTAGAAAGAGGGAAGTCTGAAAAAGTATCTATCAGGCGGCGTAATAGGGAATGGAAAGGAATTGCTAATGATGAAACCCGTGTTACTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGCTCCTAGTCATAGGAAAAGAAGCCGTGCTGATGAGCATCAAGGCACTGAGAGGGAGGCAGCCTTTCAGGTAAGCATCGCTGCCCCTCGGCGGCTGCTCCAGTTTGCGATGCGAGATGCTGTGGCCACCACAAGGCCCTCTAGTGCAGCTAAGGAACCCCTTTCGAAGCGTCTCCGTTCGGTAGTTTCTACATCCAATAGTGACACAACTAATCGTCCTAGGCGGCTTCAATCTGTTGCAAAAGTGCCAAATCCTATGGCAACTGTTATTAAGGCTGTTTCGGAGGCAGCTGAAGATGCGATAAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCTCGTGATATGGATTTAACAGAGGCCAGTGGCCAACATGCAGAATATGGAGTAACTGCCGTAGAGGACCATAAATATGGGGATATGAATCATACACAGGATCGACCTTACTCAGCCACTTATCTCAGAAACAATTATAGTGGGAAATATGCTCCCAATGAGGCCTTGTTTGAAGCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAGTGAAGATGTTACTATTCAGGGTCATAGAGTATTTGACGATTCTTGGACTGCAGAATCAGGAGTAAGAAAGGGAGGCAATTTGCGGACTGCGCCATTCAGGGTAGTTGAGAATGCTGATGATGAACGCATGACACAATATAATAAGCAGAAGGATCAACCTTCCTTAGTTGCAAATTCCTCACGCGACATTGAGAGTGAGTTACGAGGTACCAGATCTGCTGTGCATGTAACAGAGAATGGCGAGCCAGTCACTATTGTTAACCAACAGAAAAAGCCTGCAGCAAACCTTCAAAAAGAGTTCCAGAAACCTACTTTATCTGCTAATGGCCTTGCTGCCACTCGTCCCTTAGAGGACGCTGATGCTCGAACCATTTTTGTTAGCAATGTTCATTTTGCTGCTACAAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAGATTGTAAAAGTCATCATTGTAACCGATGCAACCACCGGCCAACCCAAAGGGTCGGCCTATGTGGAGTTCATGAGAAAAGAAGCTGCAGAGAGTGCATTGTCTCTTGATGGGACCTCGTTTATGTCTAGGATTCTGAAGGTCGTAAGGAAAAATGCGTCACAATCAGAAGGTGTTTCAATTGTCGCCTGGCCTCGTGCTGTGCGTGGCTCACCATATCCTACTCCCAGATTTACCAGAGTTCCTTTCCCGAGGGGCGTTCCCGGTGGATTTAGGCCTCGTCCCCCCATCAAACTTGGTGCCAGGAGCATGCAGTGGAAGCGGGATAGTCAGACCACAAATGCTGACAATGGTGCTTCTGTCTCTGGTAATTCTGTACCCTCATCTGGTGCTCGTAGTCTCACCTATGTTCGAACAGAATCTAAGCCGGCGGACAAGTAG

Protein sequence

MGSEDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPTKPSANEVPRPKSPTAEPDRINGSHNLESDLERGKSEKVSIRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQAPSHRKRSRADEHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPLSKRLRSVVSTSNSDTTNRPRRLQSVAKVPNPMATVIKAVSEAAEDAIRVKSSSVFDRLGRQSRDMDLTEASGQHAEYGVTAVEDHKYGDMNHTQDRPYSATYLRNNYSGKYAPNEALFEAETGLASDSTSESEDVTIQGHRVFDDSWTAESGVRKGGNLRTAPFRVVENADDERMTQYNKQKDQPSLVANSSRDIESELRGTRSAVHVTENGEPVTIVNQQKKPAANLQKEFQKPTLSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEIVKVIIVTDATTGQPKGSAYVEFMRKEAAESALSLDGTSFMSRILKVVRKNASQSEGVSIVAWPRAVRGSPYPTPRFTRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTNADNGASVSGNSVPSSGARSLTYVRTESKPADK

Homology

[Close]

BLAST of Tan0017388 vs. ExPASy Swiss-Prot
Match: Q28165 (Polyadenylate-binding protein 2 OS=Bos taurus OX=9913 GN=PABPN1 PE=1 SV=3)

HSP 1 Score: 75.5 bits (184), Expect = 2.5e-12
Identity = 50/138 (36.23%), Postives = 76/138 (55.07%), Query Frame = 0


Query: 473 DADARTIFVSNVHFAATKDSLSRHFNKFGEIVKVIIVTDATTGQPKGSAYVEFMRKEAAE 532
           +ADAR+I+V NV + AT + L  HF+  G + +V I+ D  +G PKG AY+EF  KE+  
Sbjct: 168 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVR 227

Query: 533 SALSLDGTSFMSRILKVVRKNASQSEGVSIV--AWPRAVRGSPYPTPRFTRVPFPRGVPG 592
           ++L+LD + F  R +KV+ K  ++  G+S     +PRA   +       +R  F  G   
Sbjct: 228 TSLALDESLFRGRQIKVIPKRTNR-PGISTTDRGFPRARYRARTTNYNSSRSRFYSGF-- 287

Query: 593 GFRPRPPIKLG-ARSMQW 608
             RPR  +  G AR+  W
Sbjct: 288 NSRPRGRVYRGRARATSW 302

[Close]

BLAST of Tan0017388 vs. ExPASy Swiss-Prot
Match: Q9DDY9 (Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.3e-12
Identity = 62/207 (29.95%), Postives = 103/207 (49.76%), Query Frame = 0


Query: 390 VENADDERMTQYNKQKDQPSLVANSSRDIESELRGTRSAV-HVTENGEPVTIVNQQKKPA 449
           +E  +DE +     ++++P  +       + EL   ++ V  + E  E +  +  + +  
Sbjct: 83  LEELEDEEL-----EEEEPGELTGDQTIEDPELEAIKARVREMEEEAEKLKELQNEVEKQ 142

Query: 450 ANLQKEFQKPTLSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEIVKVII 509
            N+      P  +   + +     +ADAR+I+V NV + AT + L  HF+  G + +V I
Sbjct: 143 MNMS---PPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTI 202

Query: 510 VTDATTGQPKGSAYVEFMRKEAAESALSLDGTSFMSRILKVVRKNASQSEGVSIV--AWP 569
           + D  TG PKG AY+EF  KE+  ++L+LD + F  R +KVV K  ++  G+S     +P
Sbjct: 203 LCDKFTGHPKGFAYIEFCDKESVRTSLALDESLFRGRQIKVVPKRTNR-PGISTTDRGFP 262

Query: 570 RA---VRGSPYPT-PRFTR--VPFPRG 588
           RA    R S Y +  RF     P PRG
Sbjct: 263 RARYRARASSYSSRSRFYSGYTPRPRG 280

[Close]

BLAST of Tan0017388 vs. ExPASy Swiss-Prot
Match: Q7ZXB8 (Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.3e-12
Identity = 62/207 (29.95%), Postives = 103/207 (49.76%), Query Frame = 0


Query: 390 VENADDERMTQYNKQKDQPSLVANSSRDIESELRGTRSAV-HVTENGEPVTIVNQQKKPA 449
           +E  +DE +     ++++P  +       + EL   ++ V  + E  E +  +  + +  
Sbjct: 82  LEELEDEEL-----EEEEPGELTGDQTIEDPELEAIKARVREMEEEAEKLKELQNEVEKQ 141

Query: 450 ANLQKEFQKPTLSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEIVKVII 509
            N+      P  +   + +     +ADAR+I+V NV + AT + L  HF+  G + +V I
Sbjct: 142 MNMS---PPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTI 201

Query: 510 VTDATTGQPKGSAYVEFMRKEAAESALSLDGTSFMSRILKVVRKNASQSEGVSIV--AWP 569
           + D  TG PKG AY+EF  KE+  ++L+LD + F  R +KVV K  ++  G+S     +P
Sbjct: 202 LCDKFTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNR-PGISTTDRGFP 261

Query: 570 RA---VRGSPYPT-PRFTR--VPFPRG 588
           RA    R S Y +  RF     P PRG
Sbjct: 262 RARYRARASSYSSRSRFYSGYTPRPRG 279

[Close]

BLAST of Tan0017388 vs. ExPASy Swiss-Prot
Match: Q8CCS6 (Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3)

HSP 1 Score: 74.7 bits (182), Expect = 4.3e-12
Identity = 50/138 (36.23%), Postives = 76/138 (55.07%), Query Frame = 0


Query: 473 DADARTIFVSNVHFAATKDSLSRHFNKFGEIVKVIIVTDATTGQPKGSAYVEFMRKEAAE 532
           +ADAR+I+V NV + AT + L  HF+  G + +V I+ D  +G PKG AY+EF  KE+  
Sbjct: 164 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVR 223

Query: 533 SALSLDGTSFMSRILKVVRKNASQSEGVSIV--AWPRAVRGSPYPTPRFTRVPFPRGVPG 592
           ++L+LD + F  R +KV+ K  ++  G+S     +PR+   +       +R  F  G   
Sbjct: 224 TSLALDESLFRGRQIKVIPKRTNR-PGISTTDRGFPRSRYRARTTNYNSSRSRFYSGF-- 283

Query: 593 GFRPRPPIKLG-ARSMQW 608
             RPR  I  G AR+  W
Sbjct: 284 NSRPRGRIYRGRARATSW 298

[Close]

BLAST of Tan0017388 vs. ExPASy Swiss-Prot
Match: Q6NVP7 (Polyadenylate-binding protein 2 OS=Xenopus tropicalis OX=8364 GN=pabpn1 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 4.3e-12
Identity = 62/207 (29.95%), Postives = 103/207 (49.76%), Query Frame = 0


Query: 390 VENADDERMTQYNKQKDQPSLVANSSRDIESELRGTRSAV-HVTENGEPVTIVNQQKKPA 449
           +E  +DE +     ++++P  +       + EL   ++ V  + E  E +  +  + +  
Sbjct: 83  LEELEDEEL-----EEEEPGELTGDQTIEDPELEAIKARVREMEEEAEKLKELQNEVEKQ 142

Query: 450 ANLQKEFQKPTLSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEIVKVII 509
            N+      P  +   + +     +ADAR+I+V NV + AT + L  HF+  G + +V I
Sbjct: 143 MNMS---PPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTI 202

Query: 510 VTDATTGQPKGSAYVEFMRKEAAESALSLDGTSFMSRILKVVRKNASQSEGVSIV--AWP 569
           + D  TG PKG AY+EF  KE+  ++L+LD + F  R +KVV K  ++  G+S     +P
Sbjct: 203 LCDKYTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNR-PGISTTDRGFP 262

Query: 570 RA---VRGSPYPT-PRFTR--VPFPRG 588
           RA    R S Y +  RF     P PRG
Sbjct: 263 RARYRARASSYSSRSRFYSGYTPRPRG 280

[Close]

BLAST of Tan0017388 vs. NCBI nr
Match: XP_022949232.1 (uncharacterized protein LOC111452645 isoform X3 [Cucurbita moschata])

HSP 1 Score: 1109.0 bits (2867), Expect = 0.0e+00
Identity = 585/648 (90.28%), Postives = 608/648 (93.83%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDR+DDRTFKVDFSGEGM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPTKPSANEVPRPKSPTAEPDRINGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYVEPP K SA+EVP  KSP AEPD   GSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKVSIRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQAPSHRKRSRAD 180
           NLESDLERGKSEK+S RRRNREWKGIANDETRVTPRSEVSRVKHSSPEQ PSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 EHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPLSKRLRSVVSTSNSDTTN 240
           +HQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PS+ AKEPLSKRLRSVVSTS SDTT+
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240

Query: 241 RPRRLQSVAKVPNPMATVIKAVSEAAEDAIRVKSSSVFDRLGRQSRDMDLTEASGQHAEY 300
            PRRLQSVAKVPNPMATVIKAVSEAAED IRVKSSSVFDRLGRQSRD+D  E+SGQ AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLR-NNYSGKYAPNEALFEAETGLASDSTSESEDVT 360
           GVTAVEDHKYGDMNHTQDRPYSATYL  +NYSGKY P EA+F+AETGLASDSTSESEDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 IQGHRVFDDSWTAESGVRKGGNLRTAPFRVVENADDERMTQYNKQKDQPSLVANSSRDIE 420
           I GH+VFDDSWTAESGVRKGGNLRTAPFRVVEN DDERMT+Y KQK QPSLVANSSRDIE
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKY-KQKHQPSLVANSSRDIE 420

Query: 421 SELRGTRSAVHVTENGEPVTIVNQQKKPAANLQKEFQKPTLSANGLAATRPLEDADARTI 480
           SELRGTRSAV VTENGEPVTIVNQQKKPAA+LQKEFQKP  SANGLAATRPLEDADARTI
Sbjct: 421 SELRGTRSAVKVTENGEPVTIVNQQKKPAAHLQKEFQKP--SANGLAATRPLEDADARTI 480

Query: 481 FVSNVHFAATKDSLSRHFNKFGEIVKVIIVTDATTGQPKGSAYVEFMRKEAAESALSLDG 540
           FVSNVHFAATKDSLSRHFNKFGE+VKVIIVTDATTGQPKGSAYVEFMRKEAAE+ALSLDG
Sbjct: 481 FVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAYVEFMRKEAAENALSLDG 540

Query: 541 TSFMSRILKVVRKNASQSEGVSIVAWPRAVRGSPYPTPRFTRVPFPRGVPGGFRPRPPIK 600
           TSF+SRILKV RKNASQ EG SIV WPRAVRGSPYPTPRF+RVPFPRGVPGGFRPRPPIK
Sbjct: 541 TSFLSRILKVARKNASQPEGASIVTWPRAVRGSPYPTPRFSRVPFPRGVPGGFRPRPPIK 600

Query: 601 LGARSMQWKRDSQTTNADNGASVSGNSVPSSGARSLTYVRTESKPADK 648
           LGARSMQWKRDSQTT  DNGAS+ G SVPS+GARSLTYVRTE KPADK
Sbjct: 601 LGARSMQWKRDSQTTTTDNGASLYGISVPSTGARSLTYVRTEPKPADK 645

[Close]

BLAST of Tan0017388 vs. NCBI nr
Match: XP_023525353.1 (uncharacterized protein LOC111788977 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1107.8 bits (2864), Expect = 0.0e+00
Identity = 585/649 (90.14%), Postives = 609/649 (93.84%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDR+DDRTFKVDFSGEGM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPTKPSANEVPRPKSPTAEPDRINGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYVEPP K SA+EVPR KSP AEPD   GSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKVSIRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQAPSHRKRSRAD 180
           NLESDLERGKSEK+S RRRNREWKGIANDETRVTPRSEVSRVKHSSPEQ PSHRKR RAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRCRAD 180

Query: 181 EHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPLSKRLRSVVSTSNSDTTN 240
           +HQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PS+ AKEPLSKRLRSVVSTSNSDT +
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTIS 240

Query: 241 RPRRLQSVAKVPNPMATVIKAVSEAAEDAIRVKSSSVFDRLGRQSRDMDLTEASGQHAEY 300
            PRRLQS+AKVPNPMATVIKAVSEAAED IRVKSSSVFDRLGRQSRD+DL E+SGQ AEY
Sbjct: 241 HPRRLQSIAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDLKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLR-NNYSGKYAPNEALFEAETGLASDSTSESEDVT 360
           GVTAVEDHKYGDMNHTQDRPYSATYL  +NYSGKY P EA+F+AETGLASDSTSESEDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 IQGHRVFDDSWTAESGVRKGGNLRTAPFRVVENADDERMTQYNKQKDQPSLVANSSRDIE 420
           I GH+VFDDSWTAESGVRKGGNLRTAPFRVVEN DDERMT+Y KQK QPSLVANSSRDIE
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKY-KQKHQPSLVANSSRDIE 420

Query: 421 SELRGTRSAVHVTENGEPVTIVNQQKKPAANLQKEFQKPTLSANGLAATRPLEDADARTI 480
           SELRGTRSAV VTENGEPVTIVNQQKKPAA+LQKEFQKP  SANGLAATRPLEDADARTI
Sbjct: 421 SELRGTRSAVQVTENGEPVTIVNQQKKPAAHLQKEFQKP--SANGLAATRPLEDADARTI 480

Query: 481 FVSNVHFAATKDSLSRHFNKFGEIVKVIIVTDATTGQPKGSAYVEFMRKEAAESALSLDG 540
           FVSNVHFAATKDSLSRHFNKFGE+VKVIIVTDATTGQPKGSAYVEFMRKEAAE+ALSLDG
Sbjct: 481 FVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAYVEFMRKEAAENALSLDG 540

Query: 541 TSFMSRILKVVRKNASQSEGVSIVAWPRAVRGSPYPTPRFTRVPFPRGVPGGFRPRPPIK 600
           TSF+SRILKV RKNASQ EG SIV WPRAVRGSPYPTPRF+RVPFPRGVPGGFRPRPPIK
Sbjct: 541 TSFLSRILKVARKNASQPEGASIVTWPRAVRGSPYPTPRFSRVPFPRGVPGGFRPRPPIK 600

Query: 601 LGARSMQWKRDSQ-TTNADNGASVSGNSVPSSGARSLTYVRTESKPADK 648
           LGARSMQWKRDSQ TT  DNGAS+ G SVPS+GARSLTYVRTE KPADK
Sbjct: 601 LGARSMQWKRDSQTTTTTDNGASLYGISVPSTGARSLTYVRTEPKPADK 646

[Close]

BLAST of Tan0017388 vs. NCBI nr
Match: XP_022998411.1 (uncharacterized protein LOC111493050 isoform X3 [Cucurbita maxima])

HSP 1 Score: 1104.4 bits (2855), Expect = 0.0e+00
Identity = 582/648 (89.81%), Postives = 605/648 (93.36%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDR+DDRTFKVDFSGEGM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPTKPSANEVPRPKSPTAEPDRINGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYVEPP K SA+EVPR KSP AEPD   GSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKVSIRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQAPSHRKRSRAD 180
           NLESDLERGKSEK+S RRRNREWKGIAN+ETRVTPRSEVSRVKHSSPEQ PSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 EHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPLSKRLRSVVSTSNSDTTN 240
           +HQG EREA FQVSIAAPRRLLQFAMRDAVAT +PS+ AKEPLSKRLRSVVSTSNSDTT+
Sbjct: 181 DHQGAEREATFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTTS 240

Query: 241 RPRRLQSVAKVPNPMATVIKAVSEAAEDAIRVKSSSVFDRLGRQSRDMDLTEASGQHAEY 300
            PRRLQSVAKVPNPMATVIKAVSEAAED IRVKSSSVFDRLGRQSRD DL E+SGQ AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDADLKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLR-NNYSGKYAPNEALFEAETGLASDSTSESEDVT 360
           GVT VEDHKYGDMNHTQDRPYSATYL  +NYSGKY P EA+F+AETGLASDSTSESEDVT
Sbjct: 301 GVTPVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 IQGHRVFDDSWTAESGVRKGGNLRTAPFRVVENADDERMTQYNKQKDQPSLVANSSRDIE 420
           I GH+VFDDSWTAESGVRKGGNLRTAPFRVVEN DDERM +Y KQK QPSLVANSSRDI 
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMIKY-KQKHQPSLVANSSRDIG 420

Query: 421 SELRGTRSAVHVTENGEPVTIVNQQKKPAANLQKEFQKPTLSANGLAATRPLEDADARTI 480
           SELRGTRSAV VTENGEPVTIVNQQKKP A+LQKEFQKP  SANGLAATRPLEDADARTI
Sbjct: 421 SELRGTRSAVKVTENGEPVTIVNQQKKPVAHLQKEFQKP--SANGLAATRPLEDADARTI 480

Query: 481 FVSNVHFAATKDSLSRHFNKFGEIVKVIIVTDATTGQPKGSAYVEFMRKEAAESALSLDG 540
           FVSNVHFAATKDSLSRHFNKFGE+VKVIIVTDATTGQPKGSAYVEFMRKEAAE+ALSLDG
Sbjct: 481 FVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAYVEFMRKEAAENALSLDG 540

Query: 541 TSFMSRILKVVRKNASQSEGVSIVAWPRAVRGSPYPTPRFTRVPFPRGVPGGFRPRPPIK 600
           TSF+SRILKV RKNASQ EG SIV WPRAVRGSPYPTPRF+RVPFPRGVPGGFRPRPPIK
Sbjct: 541 TSFLSRILKVARKNASQPEGASIVTWPRAVRGSPYPTPRFSRVPFPRGVPGGFRPRPPIK 600

Query: 601 LGARSMQWKRDSQTTNADNGASVSGNSVPSSGARSLTYVRTESKPADK 648
           LGARSMQWKRDSQTT  DNGAS+ G SVPS+GARSLTYVRTE KPADK
Sbjct: 601 LGARSMQWKRDSQTTTTDNGASLYGISVPSTGARSLTYVRTEPKPADK 645

[Close]

BLAST of Tan0017388 vs. NCBI nr
Match: XP_022949231.1 (uncharacterized protein LOC111452645 isoform X2 [Cucurbita moschata])

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 585/651 (89.86%), Postives = 608/651 (93.39%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDR+DDRTFKVDFSGEGM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPTKPSANEVPRPKSPTAEPDRINGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYVEPP K SA+EVP  KSP AEPD   GSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKVSIRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQAPSHRKRSRAD 180
           NLESDLERGKSEK+S RRRNREWKGIANDETRVTPRSEVSRVKHSSPEQ PSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 EHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPLSKRLRSVVSTSNSDTTN 240
           +HQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PS+ AKEPLSKRLRSVVSTS SDTT+
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240

Query: 241 RPRRLQSVAKVPNPMATVIKAVSEAAEDAIRVKSSSVFDRLGRQSRDMDLTEASGQHAEY 300
            PRRLQSVAKVPNPMATVIKAVSEAAED IRVKSSSVFDRLGRQSRD+D  E+SGQ AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLR-NNYSGKYAPNEALFEAETGLASDSTSESEDVT 360
           GVTAVEDHKYGDMNHTQDRPYSATYL  +NYSGKY P EA+F+AETGLASDSTSESEDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 IQGHRVFDDSWTAESGVRKGGNLRTAPFRVVENADDERMTQYNKQKDQPSLVANSSRDI- 420
           I GH+VFDDSWTAESGVRKGGNLRTAPFRVVEN DDERMT+Y KQK QPSLVANSSRDI 
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKY-KQKHQPSLVANSSRDIF 420

Query: 421 --ESELRGTRSAVHVTENGEPVTIVNQQKKPAANLQKEFQKPTLSANGLAATRPLEDADA 480
             ESELRGTRSAV VTENGEPVTIVNQQKKPAA+LQKEFQKP  SANGLAATRPLEDADA
Sbjct: 421 LQESELRGTRSAVKVTENGEPVTIVNQQKKPAAHLQKEFQKP--SANGLAATRPLEDADA 480

Query: 481 RTIFVSNVHFAATKDSLSRHFNKFGEIVKVIIVTDATTGQPKGSAYVEFMRKEAAESALS 540
           RTIFVSNVHFAATKDSLSRHFNKFGE+VKVIIVTDATTGQPKGSAYVEFMRKEAAE+ALS
Sbjct: 481 RTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAYVEFMRKEAAENALS 540

Query: 541 LDGTSFMSRILKVVRKNASQSEGVSIVAWPRAVRGSPYPTPRFTRVPFPRGVPGGFRPRP 600
           LDGTSF+SRILKV RKNASQ EG SIV WPRAVRGSPYPTPRF+RVPFPRGVPGGFRPRP
Sbjct: 541 LDGTSFLSRILKVARKNASQPEGASIVTWPRAVRGSPYPTPRFSRVPFPRGVPGGFRPRP 600

Query: 601 PIKLGARSMQWKRDSQTTNADNGASVSGNSVPSSGARSLTYVRTESKPADK 648
           PIKLGARSMQWKRDSQTT  DNGAS+ G SVPS+GARSLTYVRTE KPADK
Sbjct: 601 PIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTGARSLTYVRTEPKPADK 648

[Close]

BLAST of Tan0017388 vs. NCBI nr
Match: XP_023525352.1 (uncharacterized protein LOC111788977 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1102.4 bits (2850), Expect = 0.0e+00
Identity = 585/652 (89.72%), Postives = 609/652 (93.40%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDR+DDRTFKVDFSGEGM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPTKPSANEVPRPKSPTAEPDRINGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYVEPP K SA+EVPR KSP AEPD   GSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKVSIRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQAPSHRKRSRAD 180
           NLESDLERGKSEK+S RRRNREWKGIANDETRVTPRSEVSRVKHSSPEQ PSHRKR RAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRCRAD 180

Query: 181 EHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPLSKRLRSVVSTSNSDTTN 240
           +HQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PS+ AKEPLSKRLRSVVSTSNSDT +
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTIS 240

Query: 241 RPRRLQSVAKVPNPMATVIKAVSEAAEDAIRVKSSSVFDRLGRQSRDMDLTEASGQHAEY 300
            PRRLQS+AKVPNPMATVIKAVSEAAED IRVKSSSVFDRLGRQSRD+DL E+SGQ AEY
Sbjct: 241 HPRRLQSIAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDLKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLR-NNYSGKYAPNEALFEAETGLASDSTSESEDVT 360
           GVTAVEDHKYGDMNHTQDRPYSATYL  +NYSGKY P EA+F+AETGLASDSTSESEDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 IQGHRVFDDSWTAESGVRKGGNLRTAPFRVVENADDERMTQYNKQKDQPSLVANSSRDI- 420
           I GH+VFDDSWTAESGVRKGGNLRTAPFRVVEN DDERMT+Y KQK QPSLVANSSRDI 
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKY-KQKHQPSLVANSSRDIF 420

Query: 421 --ESELRGTRSAVHVTENGEPVTIVNQQKKPAANLQKEFQKPTLSANGLAATRPLEDADA 480
             ESELRGTRSAV VTENGEPVTIVNQQKKPAA+LQKEFQKP  SANGLAATRPLEDADA
Sbjct: 421 LQESELRGTRSAVQVTENGEPVTIVNQQKKPAAHLQKEFQKP--SANGLAATRPLEDADA 480

Query: 481 RTIFVSNVHFAATKDSLSRHFNKFGEIVKVIIVTDATTGQPKGSAYVEFMRKEAAESALS 540
           RTIFVSNVHFAATKDSLSRHFNKFGE+VKVIIVTDATTGQPKGSAYVEFMRKEAAE+ALS
Sbjct: 481 RTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAYVEFMRKEAAENALS 540

Query: 541 LDGTSFMSRILKVVRKNASQSEGVSIVAWPRAVRGSPYPTPRFTRVPFPRGVPGGFRPRP 600
           LDGTSF+SRILKV RKNASQ EG SIV WPRAVRGSPYPTPRF+RVPFPRGVPGGFRPRP
Sbjct: 541 LDGTSFLSRILKVARKNASQPEGASIVTWPRAVRGSPYPTPRFSRVPFPRGVPGGFRPRP 600

Query: 601 PIKLGARSMQWKRDSQ-TTNADNGASVSGNSVPSSGARSLTYVRTESKPADK 648
           PIKLGARSMQWKRDSQ TT  DNGAS+ G SVPS+GARSLTYVRTE KPADK
Sbjct: 601 PIKLGARSMQWKRDSQTTTTTDNGASLYGISVPSTGARSLTYVRTEPKPADK 649

[Close]

BLAST of Tan0017388 vs. ExPASy TrEMBL
Match: A0A6J1GBG6 (uncharacterized protein LOC111452645 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111452645 PE=4 SV=1)

HSP 1 Score: 1109.0 bits (2867), Expect = 0.0e+00
Identity = 585/648 (90.28%), Postives = 608/648 (93.83%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDR+DDRTFKVDFSGEGM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPTKPSANEVPRPKSPTAEPDRINGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYVEPP K SA+EVP  KSP AEPD   GSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKVSIRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQAPSHRKRSRAD 180
           NLESDLERGKSEK+S RRRNREWKGIANDETRVTPRSEVSRVKHSSPEQ PSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 EHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPLSKRLRSVVSTSNSDTTN 240
           +HQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PS+ AKEPLSKRLRSVVSTS SDTT+
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240

Query: 241 RPRRLQSVAKVPNPMATVIKAVSEAAEDAIRVKSSSVFDRLGRQSRDMDLTEASGQHAEY 300
            PRRLQSVAKVPNPMATVIKAVSEAAED IRVKSSSVFDRLGRQSRD+D  E+SGQ AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLR-NNYSGKYAPNEALFEAETGLASDSTSESEDVT 360
           GVTAVEDHKYGDMNHTQDRPYSATYL  +NYSGKY P EA+F+AETGLASDSTSESEDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 IQGHRVFDDSWTAESGVRKGGNLRTAPFRVVENADDERMTQYNKQKDQPSLVANSSRDIE 420
           I GH+VFDDSWTAESGVRKGGNLRTAPFRVVEN DDERMT+Y KQK QPSLVANSSRDIE
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKY-KQKHQPSLVANSSRDIE 420

Query: 421 SELRGTRSAVHVTENGEPVTIVNQQKKPAANLQKEFQKPTLSANGLAATRPLEDADARTI 480
           SELRGTRSAV VTENGEPVTIVNQQKKPAA+LQKEFQKP  SANGLAATRPLEDADARTI
Sbjct: 421 SELRGTRSAVKVTENGEPVTIVNQQKKPAAHLQKEFQKP--SANGLAATRPLEDADARTI 480

Query: 481 FVSNVHFAATKDSLSRHFNKFGEIVKVIIVTDATTGQPKGSAYVEFMRKEAAESALSLDG 540
           FVSNVHFAATKDSLSRHFNKFGE+VKVIIVTDATTGQPKGSAYVEFMRKEAAE+ALSLDG
Sbjct: 481 FVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAYVEFMRKEAAENALSLDG 540

Query: 541 TSFMSRILKVVRKNASQSEGVSIVAWPRAVRGSPYPTPRFTRVPFPRGVPGGFRPRPPIK 600
           TSF+SRILKV RKNASQ EG SIV WPRAVRGSPYPTPRF+RVPFPRGVPGGFRPRPPIK
Sbjct: 541 TSFLSRILKVARKNASQPEGASIVTWPRAVRGSPYPTPRFSRVPFPRGVPGGFRPRPPIK 600

Query: 601 LGARSMQWKRDSQTTNADNGASVSGNSVPSSGARSLTYVRTESKPADK 648
           LGARSMQWKRDSQTT  DNGAS+ G SVPS+GARSLTYVRTE KPADK
Sbjct: 601 LGARSMQWKRDSQTTTTDNGASLYGISVPSTGARSLTYVRTEPKPADK 645

[Close]

BLAST of Tan0017388 vs. ExPASy TrEMBL
Match: A0A6J1KA60 (uncharacterized protein LOC111493050 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111493050 PE=4 SV=1)

HSP 1 Score: 1104.4 bits (2855), Expect = 0.0e+00
Identity = 582/648 (89.81%), Postives = 605/648 (93.36%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDR+DDRTFKVDFSGEGM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPTKPSANEVPRPKSPTAEPDRINGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYVEPP K SA+EVPR KSP AEPD   GSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKVSIRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQAPSHRKRSRAD 180
           NLESDLERGKSEK+S RRRNREWKGIAN+ETRVTPRSEVSRVKHSSPEQ PSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 EHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPLSKRLRSVVSTSNSDTTN 240
           +HQG EREA FQVSIAAPRRLLQFAMRDAVAT +PS+ AKEPLSKRLRSVVSTSNSDTT+
Sbjct: 181 DHQGAEREATFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTTS 240

Query: 241 RPRRLQSVAKVPNPMATVIKAVSEAAEDAIRVKSSSVFDRLGRQSRDMDLTEASGQHAEY 300
            PRRLQSVAKVPNPMATVIKAVSEAAED IRVKSSSVFDRLGRQSRD DL E+SGQ AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDADLKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLR-NNYSGKYAPNEALFEAETGLASDSTSESEDVT 360
           GVT VEDHKYGDMNHTQDRPYSATYL  +NYSGKY P EA+F+AETGLASDSTSESEDVT
Sbjct: 301 GVTPVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 IQGHRVFDDSWTAESGVRKGGNLRTAPFRVVENADDERMTQYNKQKDQPSLVANSSRDIE 420
           I GH+VFDDSWTAESGVRKGGNLRTAPFRVVEN DDERM +Y KQK QPSLVANSSRDI 
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMIKY-KQKHQPSLVANSSRDIG 420

Query: 421 SELRGTRSAVHVTENGEPVTIVNQQKKPAANLQKEFQKPTLSANGLAATRPLEDADARTI 480
           SELRGTRSAV VTENGEPVTIVNQQKKP A+LQKEFQKP  SANGLAATRPLEDADARTI
Sbjct: 421 SELRGTRSAVKVTENGEPVTIVNQQKKPVAHLQKEFQKP--SANGLAATRPLEDADARTI 480

Query: 481 FVSNVHFAATKDSLSRHFNKFGEIVKVIIVTDATTGQPKGSAYVEFMRKEAAESALSLDG 540
           FVSNVHFAATKDSLSRHFNKFGE+VKVIIVTDATTGQPKGSAYVEFMRKEAAE+ALSLDG
Sbjct: 481 FVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAYVEFMRKEAAENALSLDG 540

Query: 541 TSFMSRILKVVRKNASQSEGVSIVAWPRAVRGSPYPTPRFTRVPFPRGVPGGFRPRPPIK 600
           TSF+SRILKV RKNASQ EG SIV WPRAVRGSPYPTPRF+RVPFPRGVPGGFRPRPPIK
Sbjct: 541 TSFLSRILKVARKNASQPEGASIVTWPRAVRGSPYPTPRFSRVPFPRGVPGGFRPRPPIK 600

Query: 601 LGARSMQWKRDSQTTNADNGASVSGNSVPSSGARSLTYVRTESKPADK 648
           LGARSMQWKRDSQTT  DNGAS+ G SVPS+GARSLTYVRTE KPADK
Sbjct: 601 LGARSMQWKRDSQTTTTDNGASLYGISVPSTGARSLTYVRTEPKPADK 645

[Close]

BLAST of Tan0017388 vs. ExPASy TrEMBL
Match: A0A6J1GBF7 (uncharacterized protein LOC111452645 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452645 PE=4 SV=1)

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 585/651 (89.86%), Postives = 608/651 (93.39%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDR+DDRTFKVDFSGEGM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPTKPSANEVPRPKSPTAEPDRINGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYVEPP K SA+EVP  KSP AEPD   GSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKVSIRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQAPSHRKRSRAD 180
           NLESDLERGKSEK+S RRRNREWKGIANDETRVTPRSEVSRVKHSSPEQ PSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 EHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPLSKRLRSVVSTSNSDTTN 240
           +HQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PS+ AKEPLSKRLRSVVSTS SDTT+
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240

Query: 241 RPRRLQSVAKVPNPMATVIKAVSEAAEDAIRVKSSSVFDRLGRQSRDMDLTEASGQHAEY 300
            PRRLQSVAKVPNPMATVIKAVSEAAED IRVKSSSVFDRLGRQSRD+D  E+SGQ AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLR-NNYSGKYAPNEALFEAETGLASDSTSESEDVT 360
           GVTAVEDHKYGDMNHTQDRPYSATYL  +NYSGKY P EA+F+AETGLASDSTSESEDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 IQGHRVFDDSWTAESGVRKGGNLRTAPFRVVENADDERMTQYNKQKDQPSLVANSSRDI- 420
           I GH+VFDDSWTAESGVRKGGNLRTAPFRVVEN DDERMT+Y KQK QPSLVANSSRDI 
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKY-KQKHQPSLVANSSRDIF 420

Query: 421 --ESELRGTRSAVHVTENGEPVTIVNQQKKPAANLQKEFQKPTLSANGLAATRPLEDADA 480
             ESELRGTRSAV VTENGEPVTIVNQQKKPAA+LQKEFQKP  SANGLAATRPLEDADA
Sbjct: 421 LQESELRGTRSAVKVTENGEPVTIVNQQKKPAAHLQKEFQKP--SANGLAATRPLEDADA 480

Query: 481 RTIFVSNVHFAATKDSLSRHFNKFGEIVKVIIVTDATTGQPKGSAYVEFMRKEAAESALS 540
           RTIFVSNVHFAATKDSLSRHFNKFGE+VKVIIVTDATTGQPKGSAYVEFMRKEAAE+ALS
Sbjct: 481 RTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAYVEFMRKEAAENALS 540

Query: 541 LDGTSFMSRILKVVRKNASQSEGVSIVAWPRAVRGSPYPTPRFTRVPFPRGVPGGFRPRP 600
           LDGTSF+SRILKV RKNASQ EG SIV WPRAVRGSPYPTPRF+RVPFPRGVPGGFRPRP
Sbjct: 541 LDGTSFLSRILKVARKNASQPEGASIVTWPRAVRGSPYPTPRFSRVPFPRGVPGGFRPRP 600

Query: 601 PIKLGARSMQWKRDSQTTNADNGASVSGNSVPSSGARSLTYVRTESKPADK 648
           PIKLGARSMQWKRDSQTT  DNGAS+ G SVPS+GARSLTYVRTE KPADK
Sbjct: 601 PIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTGARSLTYVRTEPKPADK 648

[Close]

BLAST of Tan0017388 vs. ExPASy TrEMBL
Match: A0A6J1KCF3 (uncharacterized protein LOC111493050 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493050 PE=4 SV=1)

HSP 1 Score: 1099.0 bits (2841), Expect = 0.0e+00
Identity = 582/651 (89.40%), Postives = 605/651 (92.93%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDR+DDRTFKVDFSGEGM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPTKPSANEVPRPKSPTAEPDRINGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYVEPP K SA+EVPR KSP AEPD   GSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKVSIRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQAPSHRKRSRAD 180
           NLESDLERGKSEK+S RRRNREWKGIAN+ETRVTPRSEVSRVKHSSPEQ PSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 EHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPLSKRLRSVVSTSNSDTTN 240
           +HQG EREA FQVSIAAPRRLLQFAMRDAVAT +PS+ AKEPLSKRLRSVVSTSNSDTT+
Sbjct: 181 DHQGAEREATFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTTS 240

Query: 241 RPRRLQSVAKVPNPMATVIKAVSEAAEDAIRVKSSSVFDRLGRQSRDMDLTEASGQHAEY 300
            PRRLQSVAKVPNPMATVIKAVSEAAED IRVKSSSVFDRLGRQSRD DL E+SGQ AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDADLKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLR-NNYSGKYAPNEALFEAETGLASDSTSESEDVT 360
           GVT VEDHKYGDMNHTQDRPYSATYL  +NYSGKY P EA+F+AETGLASDSTSESEDVT
Sbjct: 301 GVTPVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 IQGHRVFDDSWTAESGVRKGGNLRTAPFRVVENADDERMTQYNKQKDQPSLVANSSRDI- 420
           I GH+VFDDSWTAESGVRKGGNLRTAPFRVVEN DDERM +Y KQK QPSLVANSSRDI 
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMIKY-KQKHQPSLVANSSRDIF 420

Query: 421 --ESELRGTRSAVHVTENGEPVTIVNQQKKPAANLQKEFQKPTLSANGLAATRPLEDADA 480
              SELRGTRSAV VTENGEPVTIVNQQKKP A+LQKEFQKP  SANGLAATRPLEDADA
Sbjct: 421 LQGSELRGTRSAVKVTENGEPVTIVNQQKKPVAHLQKEFQKP--SANGLAATRPLEDADA 480

Query: 481 RTIFVSNVHFAATKDSLSRHFNKFGEIVKVIIVTDATTGQPKGSAYVEFMRKEAAESALS 540
           RTIFVSNVHFAATKDSLSRHFNKFGE+VKVIIVTDATTGQPKGSAYVEFMRKEAAE+ALS
Sbjct: 481 RTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAYVEFMRKEAAENALS 540

Query: 541 LDGTSFMSRILKVVRKNASQSEGVSIVAWPRAVRGSPYPTPRFTRVPFPRGVPGGFRPRP 600
           LDGTSF+SRILKV RKNASQ EG SIV WPRAVRGSPYPTPRF+RVPFPRGVPGGFRPRP
Sbjct: 541 LDGTSFLSRILKVARKNASQPEGASIVTWPRAVRGSPYPTPRFSRVPFPRGVPGGFRPRP 600

Query: 601 PIKLGARSMQWKRDSQTTNADNGASVSGNSVPSSGARSLTYVRTESKPADK 648
           PIKLGARSMQWKRDSQTT  DNGAS+ G SVPS+GARSLTYVRTE KPADK
Sbjct: 601 PIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTGARSLTYVRTEPKPADK 648

[Close]

BLAST of Tan0017388 vs. ExPASy TrEMBL
Match: A0A6J1GC70 (nucleolin 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452645 PE=4 SV=1)

HSP 1 Score: 1092.8 bits (2825), Expect = 0.0e+00
Identity = 585/679 (86.16%), Postives = 608/679 (89.54%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDR+DDRTFKVDFSGEGM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPTKPSANEVPRPKSPTAEPDRINGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYVEPP K SA+EVP  KSP AEPD   GSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKVSIRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQAPSHRKRSRAD 180
           NLESDLERGKSEK+S RRRNREWKGIANDETRVTPRSEVSRVKHSSPEQ PSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 EHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPLSKRLRSVVSTSNSDTTN 240
           +HQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PS+ AKEPLSKRLRSVVSTS SDTT+
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240

Query: 241 RPRRLQSVAKVPNPMATVIKAVSEAAEDAIRVKSSSVFDRLGRQSRDMDLTEASGQHAEY 300
            PRRLQSVAKVPNPMATVIKAVSEAAED IRVKSSSVFDRLGRQSRD+D  E+SGQ AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLR-NNYSGKYAPNEALFEAETGLASDSTSESEDVT 360
           GVTAVEDHKYGDMNHTQDRPYSATYL  +NYSGKY P EA+F+AETGLASDSTSESEDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 IQGHRVFDDSWTAESGVRKGGNLRTAPFRVVENADDERMTQYNKQKDQPSLVANSSRDI- 420
           I GH+VFDDSWTAESGVRKGGNLRTAPFRVVEN DDERMT+Y KQK QPSLVANSSRDI 
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKY-KQKHQPSLVANSSRDIV 420

Query: 421 ------------------------------ESELRGTRSAVHVTENGEPVTIVNQQKKPA 480
                                         ESELRGTRSAV VTENGEPVTIVNQQKKPA
Sbjct: 421 NISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPA 480

Query: 481 ANLQKEFQKPTLSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEIVKVII 540
           A+LQKEFQKP  SANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGE+VKVII
Sbjct: 481 AHLQKEFQKP--SANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540

Query: 541 VTDATTGQPKGSAYVEFMRKEAAESALSLDGTSFMSRILKVVRKNASQSEGVSIVAWPRA 600
           VTDATTGQPKGSAYVEFMRKEAAE+ALSLDGTSF+SRILKV RKNASQ EG SIV WPRA
Sbjct: 541 VTDATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRA 600

Query: 601 VRGSPYPTPRFTRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTNADNGASVSGNSVP 648
           VRGSPYPTPRF+RVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTT  DNGAS+ G SVP
Sbjct: 601 VRGSPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVP 660

[Close]

BLAST of Tan0017388 vs. TAIR 10
Match: AT3G12640.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 414.1 bits (1063), Expect = 2.1e-115
Identity = 305/677 (45.05%), Postives = 390/677 (57.61%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGS D VDDRTF  DFS EG+AKL+E +K K+KE+MGDYTDD LVEYVIVLLRNGRRKEE
Sbjct: 1   MGSADLVDDRTFNGDFSVEGVAKLKEMVKDKLKEYMGDYTDDILVEYVIVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPTKPSANEVPRPKSPTAEPDRINGSH 120
           A NEL +FL DDS SFV+WLWDHLA S+D Y       S  E    KS            
Sbjct: 61  ANNELKIFLGDDSDSFVAWLWDHLAESVDEYFS-----SNVEGTTIKSSLISSHEDKALV 120

Query: 121 NLESDLERGKSEKVSIRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQAPSHRKRSRAD 180
            L+S+ ++G+S+K +  RR R+W+         +  + VS +      +A S RKRSR D
Sbjct: 121 PLDSEYDKGRSDKSNGARRGRQWR---------SQPTNVSEIPPLLSSEAQSQRKRSRTD 180

Query: 181 EHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPLSKRLRSVVSTS--NSDT 240
           + +  +REA   VS    RRLLQFA+RDA+A +RP++++ E   KRLRSVVSTS  NS  
Sbjct: 181 DSRNEQREAKPDVS----RRLLQFAVRDALAISRPANSSTESSLKRLRSVVSTSTQNSSD 240

Query: 241 TNRPRRLQSVAKVPNPMATVIKAVSEAAEDAIRVKSS-SVFDRLGRQS------RDMDLT 300
            +  R+++SVA+V NPMATV+KAV+EAAEDA + KS  SVFDR+   +      ++M L 
Sbjct: 241 PDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRISHSTGSETLDQNMVLG 300

Query: 301 EASGQHAE-----YGVTAVEDHKYGDMNHTQDRPYSATYLRNNYSGKYAPNEALFEAETG 360
           E S +  E      G  AV+      + +TQ    +  Y  N  +     N   F ++ G
Sbjct: 301 EVSPKDEESRNFSQGQEAVQ------LQYTQSLANNGVYFENMTTNDTGLNPD-FSSDRG 360

Query: 361 LASDSTSESEDVTIQG----------HRVFDDSWTAESGVRKGGNL-------RTAPFRV 420
               S + S   T  G          HR+ DDS   + G      L       +TA F  
Sbjct: 361 RLGSSVNVSHPSTYLGNRINNPNSLQHRLVDDSKRVK-GTNYQNRLPEVATKHKTASFS- 420

Query: 421 VENADDERMTQYNKQKDQPSLVANSSRDIESELRGTRSAVHV-TENGEPVTIVNQQKKPA 480
             N D  +  +  +Q+  P +      D E  L  + +   + T+     TI N   KPA
Sbjct: 421 -GNIDTGKTVKLEEQRKIPDVGLQRYMD-EGRLVSSEATTQLSTQKILGDTIGNGNVKPA 480

Query: 481 ANLQKEFQKPTLSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEIVKVII 540
           A++++E          L+ TRPLEDA +RTIFV+NVHF ATKDSLSRHFNKFGE++K  I
Sbjct: 481 ASVKEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFI 540

Query: 541 VTDATTGQPKGSAYVEFMRKEAAESALSLDGTSFMSRILKVVR-KNASQSEGVSIVAWPR 600
           VTD  TGQP GSAY+EF RKEAAE+ALSLDGTSFMSRILK+V+  N    E  S ++W R
Sbjct: 541 VTDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILKIVKGSNGQNQEAASSMSWSR 600

Query: 601 AVRGSPYPTPRFTRVP-FPRGVPGGFRPRPPIKLGARSMQWKRDSQTTNADNGASVSGNS 644
                     RFTR P + RG  G  R R  ++ G RSMQWKRDS    AD G   + N+
Sbjct: 601 G--------GRFTRAPSYFRG--GAVRGRSVVRGGGRSMQWKRDS----ADTG---NNNN 631

[Close]

BLAST of Tan0017388 vs. TAIR 10
Match: AT2G24350.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 88.2 bits (217), Expect = 2.6e-17
Identity = 152/585 (25.98%), Postives = 246/585 (42.05%), Query Frame = 0


Query: 7   VDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELN 66
           VD  TF +    E  ++L+  I   +  F  DY+DD L EYV VL+ NG+ + +A  +L 
Sbjct: 5   VDGLTFPMSRVSESASRLKTIISDMLPRFTDDYSDD-LSEYVTVLVCNGKSQRQASEDLE 64

Query: 67  VFLADDSHSFVSWLWDHLASSMDLYVEPPTKPSA--NEVPRPKSPTAEPDRINGSHNLES 126
            FL + S  FV  LW+ L      Y       S    +V    + T     ++     + 
Sbjct: 65  AFLKEQSWKFVVCLWELLVK----YFSQSNSASGPKTDVDFGSNDTLIKQGLSSRKYDDY 124

Query: 127 DLERGKSEKVSIRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQAPSHRKRSRADEHQG 186
           D +          +       I + E  V+P+ E  ++       +P  R R R  E+  
Sbjct: 125 DCKAADGTNSMNEQLISVTAPIDDIEAPVSPKVEKMKMSRQELIDSPCTRARRRKKENWN 184

Query: 187 TEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPLSKRLRSVVSTSNSDTTNRPRR 246
                    S    R++L+  +  A       + AK   S   RS         T + R 
Sbjct: 185 ---------SSGYSRKVLRSVIVSATQQPCDRNPAKYEKSMNERS--------RTLKKRP 244

Query: 247 LQSVAKVPNPMATVIKAVSEAAEDAIRVKSS----SVFDRLGRQSRDMDLTEASGQHAEY 306
                ++ +  A   +AVS    DA   + +    SV+DRLGR S +  L   S   +++
Sbjct: 245 YSPERELDSRFAPSGRAVSARYHDASLHQETEPHVSVWDRLGRASSECVLDTESRTLSKF 304

Query: 307 GV----TAVEDHKYGDMNHTQDRPYSATYLRNNYSGKYAPNEALFEAETGLASDSTSESE 366
           G+    T V               +S  + R   +  Y      F+       D   +SE
Sbjct: 305 GIQTRETKVHQQHGPVFPAAYSEQHSEIFQREVLAVGYRHRVPQFD------KDRKPKSE 364

Query: 367 DVT-IQGHRVFDDSWTAESGVRKGGNLRTAPFRVVENADDERMTQYNKQKDQ----PSLV 426
            +T  + H  ++ S     G+            V  N+ +       KQ +Q    PSL+
Sbjct: 365 TITSTEPHIAYNLSRKRRYGM------------VSPNSGEFSYVPQYKQAEQDFEKPSLL 424

Query: 427 ANSS--RDIESELRGTRSAVHVTENGEPVTIVNQQKKPAANLQKEFQKPTLSANGLAATR 486
           ++ S  +DI SE++      +V E  + + +   Q K     + E +KP+  +     ++
Sbjct: 425 SHQSTKQDIFSEIK------NVKEKMQELELRIIQSKQLKKQKVEERKPSPQS---GESQ 484

Query: 487 PLED-ADARTIFVSNVHFAATKDSLSRHF-NKFGEIVKVIIVTDATTGQPKGSAYVEFMR 546
             ED +++R I V+NV++AA K+++S  F +K G +  VI+VTD  T  PKG+A+V F  
Sbjct: 485 YQEDVSESRVIHVTNVYYAAKKEAISMFFSSKCGAVQNVIVVTDPVTRHPKGTAFVTFAT 537

Query: 547 KEAAESALSLDGTSFMSRILKVVRKNASQSEGVSIVAWPRAVRGS 573
           KE+   A++L GT F SR +K VR +   S  VS  A P+ V GS
Sbjct: 545 KESVGKAVALSGTMFYSRPIK-VRMHVIASGVVS--AAPQIVTGS 537

[Close]

BLAST of Tan0017388 vs. TAIR 10
Match: AT5G65260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 72.4 bits (176), Expect = 1.5e-12
Identity = 52/140 (37.14%), Postives = 75/140 (53.57%), Query Frame = 0


Query: 472 EDADARTIFVSNVHFAATKDSLSRHFNKFGEIVKVIIVTDATTGQPKGSAYVEFMRKEAA 531
           E+ DAR++FV NV +A T + + +HF   G + +V I+TD   GQPKG AYVEF+  EA 
Sbjct: 87  EEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTD-KFGQPKGFAYVEFVEVEAV 146

Query: 532 ESALSLDGTSFMSRILKVVRKNASQSEGVSIVAWPRAVRGSPYPTPRFTRVPFPRGV--- 591
           + AL L+ +    R LKV++K  +    V  +   R  R +PY   RF R PF       
Sbjct: 147 QEALQLNESELHGRQLKVLQKRTN----VPGLKQFRGRRFNPYMGYRFRR-PFMSPYMYS 206

Query: 592 PGGFRPRPPIKLGARSMQWK 609
           P G+   P  +   R M ++
Sbjct: 207 PYGYGKAPRFRRPMRYMPYQ 220

[Close]

BLAST of Tan0017388 vs. TAIR 10
Match: AT5G51120.2 (polyadenylate-binding protein 1 )

HSP 1 Score: 70.5 bits (171), Expect = 5.7e-12
Identity = 39/105 (37.14%), Postives = 65/105 (61.90%), Query Frame = 0


Query: 451 LQKEFQKPTLSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEIVKVIIVT 510
           L+ E++K  +++   AA +  E+ D+R+I+V NV +A T + + +HF   G + +V I+T
Sbjct: 117 LEFEYEKEIINSGVSAAEK--EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILT 176

Query: 511 DATTGQPKGSAYVEFMRKEAAESALSLDGTSFMSRILKVVRKNAS 556
           D   GQPKG AYVEF+  EA +++L L+ +    R +KV  K  +
Sbjct: 177 D-KFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTN 218

[Close]

BLAST of Tan0017388 vs. TAIR 10
Match: AT5G51120.3 (polyadenylate-binding protein 1 )

HSP 1 Score: 67.4 bits (163), Expect = 4.8e-11
Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 0


Query: 460 LSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEIVKVIIVTDATTGQPKG 519
           L   G++A    E+ D+R+I+V NV +A T + + +HF   G + +V I+TD   GQPKG
Sbjct: 2   LHGGGVSAAEK-EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKG 61

Query: 520 SAYVEFMRKEAAESALSLDGTSFMSRILKVVRKNAS 556
            AYVEF+  EA +++L L+ +    R +KV  K  +
Sbjct: 62  FAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTN 95

The following BLAST results are available for this feature:

BLAST of Tan0017388 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q28165	2.5e-12	36.23	Polyadenylate-binding protein 2 OS=Bos taurus OX=9913 GN=PABPN1 PE=1 SV=3	[more]
Q9DDY9	3.3e-12	29.95	Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=...	[more]
Q7ZXB8	3.3e-12	29.95	Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=...	[more]
Q8CCS6	4.3e-12	36.23	Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3	[more]
Q6NVP7	4.3e-12	29.95	Polyadenylate-binding protein 2 OS=Xenopus tropicalis OX=8364 GN=pabpn1 PE=2 SV=...	[more]

BLAST of Tan0017388 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949232.1	0.0e+00	90.28	uncharacterized protein LOC111452645 isoform X3 [Cucurbita moschata]	[more]
XP_023525353.1	0.0e+00	90.14	uncharacterized protein LOC111788977 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_022998411.1	0.0e+00	89.81	uncharacterized protein LOC111493050 isoform X3 [Cucurbita maxima]	[more]
XP_022949231.1	0.0e+00	89.86	uncharacterized protein LOC111452645 isoform X2 [Cucurbita moschata]	[more]
XP_023525352.1	0.0e+00	89.72	uncharacterized protein LOC111788977 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0017388 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBG6	0.0e+00	90.28	uncharacterized protein LOC111452645 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KA60	0.0e+00	89.81	uncharacterized protein LOC111493050 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GBF7	0.0e+00	89.86	uncharacterized protein LOC111452645 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KCF3	0.0e+00	89.40	uncharacterized protein LOC111493050 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GC70	0.0e+00	86.16	nucleolin 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452645 PE=4 S...	[more]

BLAST of Tan0017388 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12640.1	2.1e-115	45.05	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G24350.1	2.6e-17	25.98	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G65260.1	1.5e-12	37.14	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G51120.2	5.7e-12	37.14	polyadenylate-binding protein 1	[more]
AT5G51120.3	4.8e-11	38.54	polyadenylate-binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 509..581 e-value: 1.9E-19 score: 80.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 510..578 e-value: 1.4E-17 score: 63.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 508..580 score: 16.773018
IPR002483	PWI domain	PFAM	PF01480	PWI	coord: 24..87 e-value: 2.0E-7 score: 31.2
None	No IPR available	GENE3D	1.20.1390.10	PWI domain	coord: 9..91 e-value: 2.5E-10 score: 42.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..135
None	No IPR available	PANTHER	PTHR14738:SF32	RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 5..580
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 457..581 e-value: 6.0E-24 score: 86.6
IPR040366	Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14	PANTHER	PTHR14738	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14	coord: 5..580
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 501..580

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0017388.1	Tan0017388.1	mRNA
Tan0017388.2	Tan0017388.2	mRNA
Tan0017388.3	Tan0017388.3	mRNA
Tan0017388.4	Tan0017388.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900364	negative regulation of mRNA polyadenylation
biological_process	GO:0043488	regulation of mRNA stability
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008143	poly(A) binding
molecular_function	GO:0003676	nucleic acid binding