Tan0017309 (gene) Snake gourd v1

Overview
NameTan0017309
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionlate embryogenesis abundant protein At5g17165-like
LocationLG07: 4844293 .. 4848092 (-)
RNA-Seq ExpressionTan0017309
SyntenyTan0017309
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAATTTAACTCTCCAATTCTTCAAATATAAATCCTTTTTTAACATAAACCGTTCACTCCTCACTCCACCCATTATTCTTAAAACTAAAATCACATTAATATTCTTTTGAAAAGTTCCTCTTTTAATTTTCTTCTTTTTATCCATTGCATGGCCGCCAATTCGAATTACCTTGTTATTGTTATTGCTAGACGACTCACCGGTTTAGGGAAGCCAGTCCTTAGCCTCAGCTGGAAGAATTGGACCACCCCTTGCTCCTCTCAATCTCCCTCCCTCTTCCGCCTCCGGTACGCTTACGTCCTTTTCTTTTTTTCGCGTTTTCAGCTTTTTTTTTTTCTTTTTTTTCTTCTTTGAGATGATTCATTTTTCATCGAGAACCAGTTTTGTTATTGAGATTTGAGTCTGTTTGTCGAATTTTGTTGATATTGTAATGTGTTAGCATGTTTAGAATGTCTTTGTTTGATTTCCATTTGTTAGACGACTTTTGTTCAAATGTCCAAGTCGACAAGTGAGGAAGTATTGTATAATTAAATGGGTAATACTTGGGTGCTCAAATCTATGTTGCCCACATATTTTTTTTCTTTTTTCTTAAAAAAACACACACACACAAATCTATATTTGATTGTCTGCCCAGGCCGCACCCAAATATTTTTCTAATTAAATTTATCATAACATATCAATTTAAGTTTTTGGGTTCATTGATGATTTAACATTTGAACATGATTTATTTCAAACATACTTCTTTCCTATTTTGATGGGTTGAATTTGTTTTTGGAGGTTGTATACATAATTGATTGTTCTGTGAAAGGTTCGGTTTTGAATCAAAATGGAGAAAATAGTAAAATGAAATTGATCAACATTTTCGAGTGAGGCTAATGTCGAAATATTCCAGTGGATTAAGGTGAATTTGGCACTAGTTTTTGAAATAATAATTAAGTGTCTGCTTGGCAAAACATTTATTACCTAAGCTAAGCATGTGGATAAAATTTTGAATTTTTTACCTGAGATTGTAAGTTCATGTTGGCAGTTTGGATCAAGCTACATATAAAAGCACTATAAGTATTTTTTTTCTAAGTATTATATAGGAAGATTGAAAACTCGTCAGTAATTGACGTTTTACCTACTAATAAATTGATAAATTTAAATCGTCTCACAAAGAAGCTTATGATAATACAATACACTCCTTATTTTGATAACAATAACTACCTTTTTAGATTTTTCAAAAAAATAATAATAATAATTTTGTAGATAATTTCGGCAAGAAATTCTTTAATTATATTTGGCAAAAATAATTTCTAAAGATAATATTAAAAACCGATTAACGACTACAAAATTAATATAATATTTTAAGATTTAAATTTATAGTTGTCAAATGATTTGAATGGATATCATAGTTTATTCCTTTACTTTTTCTTTGCTTATGCTTTCCTTTGGGTTCTCTTTTAAATGAAAAAAAAAAAACTATTTCACAAAATATTATAAATAATTTCATTCAACAAATAGGAGAAATTATTTAATAAAGCTATTACAATATAGTTGACAGCTTTTGCACCATTAAATATGAGAGAAATCATCAATTACCTTTTTTTTATCCCATATATAATTATTAAGAGAAAGTTATATTGTGGTGGTTTCATTGAGTAATTTATCGACAGTGACAGTGCACTATAGAGTCTAGACAAACTCTTGAGGTCTGTTTTATTTTTATTCAAAGTTGATTTTGATCTCTTTGTAGCTAAAGGACATTATACAGCAGATCTCTTAGTCATTAAAAGAGTTATGTGTTCATTTGGCATTACACAATTTTTTTTTAATTCAATACAAATTACAAAATTTCAAAAGTTTTTTTTTAAATACAAAATTTCAACCGTTAAAATCGTATACGAACAAATTTTTATGTGTCTATATATATATATATATATATATATATATATTAAGATGTAAATTTTATAATCTACTTTCAACATTTTGACTTTTTTTCAATATTATTTTGAAAAGCTTTTCGTGTGTATATGAACATAATACTCACCTATGCTCAAATATGTCGGGGTTTAATGGCTGAGTTAAAAATTAAAAATAATTATATAGGCTCTGGTAACTATTTTGATTTTGATTTTTTGTTTTTGGAAATTAAGCTTGTAAACATTACTACTACACAATTTTCTTGCTCTGCCACATGCTCTTTAAAAATATTTTTAAAAAATCAAACCAATTTCGAGAACTTCAAAAAAAAAATTAAAACTTATTTTGGTTTTCGAAATTTGATATAAAATTAAGATGTGCTCAAATAAGGTGAAAAACTTACAAATTATGAAAAAAAAATCAACATAATTTTTAAAAACAGAAAATAAAAAATAAATAGTTATTAAACTTACCTTATTTGTTAAGTCGTAATTATTATTTATTTTAAAGAAAGGCTTGCAATCGCCTAGGTTTAGCATTAGAGCCGCATGGATTTTGATGAGCATCTTCTATATTCTGATTGATGCCTGCCTCATGCGTGTAAGGACAAAATTCATTTATTAAAGTTCTTATTTTTATTTTTATTTTTGCTAGTCTTATTATGATCTATGTGTATATTTATTTGATTTCATTGATAAATTATACCTTATAAGTCAAACTCCCTTATTGTGGTATTTAATTCAGAAAAATTGTATTTCACCACCTTTTTTGTTTTAATCTTGGATTCCAAGAATATGATAAAAACTTATTAGACATAAAATTGTTTAGACATAAAATTAAAAATTTAAAAATCTATTAAAGTTGAGTTTTATTAAACACTTTATTGATTATATTAGATATAGATGTGAAAGTTCAATTACTAAATTTGTAACTTAAAATTTTTTAAATCATGGAATTTAAAACTATGACATTTTTTCCATGATTTAAAATCATAGCAAATTGTAGTTGATATACTAGTTTTTTTTTTTTTTTTTAAAAAAAAAAACATACTACAATTGAAACAAAGAATGGGGATTTGGAAGTTGAACTATGTACAAAGTAATAATTCAACTAACAACCAATGATTTATAACATGAAGTTTATTACTCAGATTACTCCATTCTTATTTTATCTTATTCATAGTCATATTATATCAAACTATTACCCATGACAAATTATTCAATGAGACAGTCAAAAATTGTTGGATGTGGATTCAATAATTTTTCTTAAATCACCAATCAAACTAATATTAAATGGGGAGAAAATTGACTTTGCATGAATTTGAACACAATATTTTCTGGACCACCTGCTTTGATATCATCTTAAATCACATTCAAACTAAAAACTTAAACCTAATAATTTGGAGTAAATTTAATTATATCAACATAATCTAACAATTTTTATATCTCTAATAACTATTAGATATAAATCGAAGTACTTATCTCTCCATTCAACGGTGAAAAATCGTTAGTCCAACCAACATGACAAAAACACTGAAAATAACGTGAATCCAAATTGAAAAGTCCAACGACATAGACATAAAAATAACGCAACCAACTTTTTTTTTTTTTTTTTTGTAGGGCAGGTCATTGGGCAGCATATGAGAAGAACTCAGAGGAGGAAATTTGCCCTACAGTGGTACCAGATCATATGATCCACCCTCTCTCTGAAAACTACTGGTCGCCACATCCACAAACTGGAGTTTTTGGGCCACCAACTCAACACAATAATCCTCTTCCGAACGACACGTCGGCTGCTGCTGGTGGCCCTAAACAAGCCTCAGTTTTGGACCTCAAGGTTTGGTTCCGACACAACGGCCTCGAGGACCCTGAGAAGCCACATTTTCTGTGATCTCCACGCC

mRNA sequence

CTAATTTAACTCTCCAATTCTTCAAATATAAATCCTTTTTTAACATAAACCGTTCACTCCTCACTCCACCCATTATTCTTAAAACTAAAATCACATTAATATTCTTTTGAAAAGTTCCTCTTTTAATTTTCTTCTTTTTATCCATTGCATGGCCGCCAATTCGAATTACCTTGTTATTGTTATTGCTAGACGACTCACCGGTTTAGGGAAGCCAGTCCTTAGCCTCAGCTGGAAGAATTGGACCACCCCTTGCTCCTCTCAATCTCCCTCCCTCTTCCGCCTCCGGGCAGGTCATTGGGCAGCATATGAGAAGAACTCAGAGGAGGAAATTTGCCCTACAGTGGTACCAGATCATATGATCCACCCTCTCTCTGAAAACTACTGGTCGCCACATCCACAAACTGGAGTTTTTGGGCCACCAACTCAACACAATAATCCTCTTCCGAACGACACGTCGGCTGCTGCTGGTGGCCCTAAACAAGCCTCAGTTTTGGACCTCAAGGTTTGGTTCCGACACAACGGCCTCGAGGACCCTGAGAAGCCACATTTTCTGTGATCTCCACGCC

Coding sequence (CDS)

ATGGCCGCCAATTCGAATTACCTTGTTATTGTTATTGCTAGACGACTCACCGGTTTAGGGAAGCCAGTCCTTAGCCTCAGCTGGAAGAATTGGACCACCCCTTGCTCCTCTCAATCTCCCTCCCTCTTCCGCCTCCGGGCAGGTCATTGGGCAGCATATGAGAAGAACTCAGAGGAGGAAATTTGCCCTACAGTGGTACCAGATCATATGATCCACCCTCTCTCTGAAAACTACTGGTCGCCACATCCACAAACTGGAGTTTTTGGGCCACCAACTCAACACAATAATCCTCTTCCGAACGACACGTCGGCTGCTGCTGGTGGCCCTAAACAAGCCTCAGTTTTGGACCTCAAGGTTTGGTTCCGACACAACGGCCTCGAGGACCCTGAGAAGCCACATTTTCTGTGA

Protein sequence

MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL
Homology
BLAST of Tan0017309 vs. ExPASy Swiss-Prot
Match: F4KFM8 (Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN=At5g17165 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 9.2e-18
Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = 0

Query: 42  LFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPND 101
           LF  R  H +AY+KN EEE+ P+ VPD MI P S+ YWSPHPQTGVFGP +   N     
Sbjct: 28  LFTSRNDHTSAYDKNVEEELQPSQVPDEMIKPDSDKYWSPHPQTGVFGPSSSSTN----- 87

Query: 102 TSAAAGGPKQASVLDLKVWFRHNGLEDPEKPH 134
                 G ++ SV++ K WFR   LED +K H
Sbjct: 88  AKDEFRGGQEDSVMEEKAWFRPTSLEDLDKTH 114

BLAST of Tan0017309 vs. NCBI nr
Match: XP_022995249.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita maxima])

HSP 1 Score: 171.0 bits (432), Expect = 6.9e-39
Identity = 87/135 (64.44%), Postives = 98/135 (72.59%), Query Frame = 0

Query: 1   MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEE 60
           MAA SN L+I    RL  L  PV  L            SPSLF LRAGHW+AYEKN EEE
Sbjct: 1   MAAASN-LIIAARPRLAHLRNPVRRL------------SPSLFTLRAGHWSAYEKNPEEE 60

Query: 61  ICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVW 120
           +CPTVVPDHMIH +SE+YW+PHPQTGVFGPP   +NP+P+DTS  AGG K+ SVL+LKVW
Sbjct: 61  VCPTVVPDHMIHSISEDYWAPHPQTGVFGPPISQHNPVPSDTS--AGGAKEGSVLELKVW 120

Query: 121 FRHNGLEDPEKPHFL 136
           FRH  LEDPEKPH L
Sbjct: 121 FRHIELEDPEKPHDL 120

BLAST of Tan0017309 vs. NCBI nr
Match: XP_023532525.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.9 bits (429), Expect = 1.5e-38
Identity = 86/135 (63.70%), Postives = 98/135 (72.59%), Query Frame = 0

Query: 1   MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEE 60
           MAA SN L+I    RL  L  P+  L            SPSLF LRAGHW+AYEKN EEE
Sbjct: 1   MAAASN-LIIAARPRLAHLRNPLRRL------------SPSLFTLRAGHWSAYEKNPEEE 60

Query: 61  ICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVW 120
           +CPTVVPDHMIH +SE+YW+PHPQTGVFGPP   +NP+P+DTS  AGG K+ SVL+LKVW
Sbjct: 61  VCPTVVPDHMIHSISEDYWAPHPQTGVFGPPITQHNPVPSDTS--AGGAKEGSVLELKVW 120

Query: 121 FRHNGLEDPEKPHFL 136
           FRH  LEDPEKPH L
Sbjct: 121 FRHVELEDPEKPHAL 120

BLAST of Tan0017309 vs. NCBI nr
Match: KAG6605657.1 (ATP-dependent DNA helicase SRS2-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 169.1 bits (427), Expect = 2.6e-38
Identity = 85/135 (62.96%), Postives = 97/135 (71.85%), Query Frame = 0

Query: 1   MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEE 60
           MAA SN L+I    RL     P+  L            SPSLF LRAGHW+AYEKN EEE
Sbjct: 1   MAAASN-LIIAARPRLAHFRNPLRRL------------SPSLFTLRAGHWSAYEKNPEEE 60

Query: 61  ICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVW 120
           +CPTVVPDHM+H LSE+YW+PHPQTGVFGPPT  +NP+P+DTS   GG K+ SVL+LKVW
Sbjct: 61  VCPTVVPDHMLHSLSEDYWAPHPQTGVFGPPTTQHNPVPSDTS--GGGAKEGSVLELKVW 120

Query: 121 FRHNGLEDPEKPHFL 136
           FRH  LEDPEKPH L
Sbjct: 121 FRHVELEDPEKPHSL 120

BLAST of Tan0017309 vs. NCBI nr
Match: XP_022957877.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita moschata])

HSP 1 Score: 155.2 bits (391), Expect = 3.9e-34
Identity = 80/127 (62.99%), Postives = 91/127 (71.65%), Query Frame = 0

Query: 1   MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEE 60
           MAA SN L+I    RL  L  P+  L            SPSLF LRAGHW+AYEKN EEE
Sbjct: 1   MAAASN-LIIAARPRLAHLRNPLRRL------------SPSLFTLRAGHWSAYEKNPEEE 60

Query: 61  ICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVW 120
           +CPTVVPDHMIH LSE+YW+PHPQTGVFGPP   +NP+P+DTS  AGG K+ SVL+LKVW
Sbjct: 61  VCPTVVPDHMIHSLSEDYWAPHPQTGVFGPPITQHNPVPSDTS--AGGAKEGSVLELKVW 112

Query: 121 FRHNGLE 128
           FRH  LE
Sbjct: 121 FRHVELE 112

BLAST of Tan0017309 vs. NCBI nr
Match: XP_038875585.1 (late embryogenesis abundant protein At5g17165-like [Benincasa hispida])

HSP 1 Score: 134.4 bits (337), Expect = 7.2e-28
Identity = 75/132 (56.82%), Postives = 90/132 (68.18%), Query Frame = 0

Query: 5   SNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPS-LFRLRAGHWAAYEKNSEEEICP 64
           S++ +I+ + R   L  P  SLS        S   PS  F LRA HW+AYEKN EE+I P
Sbjct: 3   SSWRIIIASPRFL-LSSPPSSLSH-------SHLFPSATFLLRASHWSAYEKNPEEQIWP 62

Query: 65  TVVPDHMIHP-LSENYWSPHPQTGVFGPPTQH--NNPLPNDTSAAAGGPKQASVLDLKVW 124
           TVVPDH+IH  +SENYW+PHP+TGVFGPP  H   + +PNDTSA   G K+ SVLD+K W
Sbjct: 63  TVVPDHVIHTNISENYWAPHPETGVFGPPIAHQSTSAVPNDTSA---GGKEDSVLDIKAW 122

Query: 125 FRHNGLEDPEKP 133
           FRHNGLED EKP
Sbjct: 123 FRHNGLEDLEKP 123

BLAST of Tan0017309 vs. ExPASy TrEMBL
Match: A0A6J1K564 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 GN=LOC111490853 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.4e-39
Identity = 87/135 (64.44%), Postives = 98/135 (72.59%), Query Frame = 0

Query: 1   MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEE 60
           MAA SN L+I    RL  L  PV  L            SPSLF LRAGHW+AYEKN EEE
Sbjct: 1   MAAASN-LIIAARPRLAHLRNPVRRL------------SPSLFTLRAGHWSAYEKNPEEE 60

Query: 61  ICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVW 120
           +CPTVVPDHMIH +SE+YW+PHPQTGVFGPP   +NP+P+DTS  AGG K+ SVL+LKVW
Sbjct: 61  VCPTVVPDHMIHSISEDYWAPHPQTGVFGPPISQHNPVPSDTS--AGGAKEGSVLELKVW 120

Query: 121 FRHNGLEDPEKPHFL 136
           FRH  LEDPEKPH L
Sbjct: 121 FRHIELEDPEKPHDL 120

BLAST of Tan0017309 vs. ExPASy TrEMBL
Match: A0A6J1H0D3 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662 GN=LOC111459285 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.9e-34
Identity = 80/127 (62.99%), Postives = 91/127 (71.65%), Query Frame = 0

Query: 1   MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEE 60
           MAA SN L+I    RL  L  P+  L            SPSLF LRAGHW+AYEKN EEE
Sbjct: 1   MAAASN-LIIAARPRLAHLRNPLRRL------------SPSLFTLRAGHWSAYEKNPEEE 60

Query: 61  ICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVW 120
           +CPTVVPDHMIH LSE+YW+PHPQTGVFGPP   +NP+P+DTS  AGG K+ SVL+LKVW
Sbjct: 61  VCPTVVPDHMIHSLSEDYWAPHPQTGVFGPPITQHNPVPSDTS--AGGAKEGSVLELKVW 112

Query: 121 FRHNGLE 128
           FRH  LE
Sbjct: 121 FRHVELE 112

BLAST of Tan0017309 vs. ExPASy TrEMBL
Match: A0A1S4E6U6 (uncharacterized protein LOC103504694 OS=Cucumis melo OX=3656 GN=LOC103504694 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 8.6e-27
Identity = 76/138 (55.07%), Postives = 87/138 (63.04%), Query Frame = 0

Query: 6   NYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLF-----RLRAGHWAAYEKNSEEE 65
           N  +IV+A   T    P LSL          S SP LF       RA HW+AYEKN E+ 
Sbjct: 25  NSKIIVVA--FTTAAAPRLSL--------LVSHSPHLFPFANSGFRASHWSAYEKNQEDP 84

Query: 66  ICPTVVPDHMI-HPLSENYWSPHPQTGVFGPPTQHNN--PLPNDTSAAAGGPKQASVLDL 125
           I PT+VP+ +I H LS+NYW PHPQTGVFGPP  H+N   LPNDTSA   G  + SVL+L
Sbjct: 85  IWPTMVPNDVIHHNLSDNYWVPHPQTGVFGPPKAHHNSSTLPNDTSA---GGNEGSVLNL 144

Query: 126 KVWFRHNGLEDPEKPHFL 136
           K WFRHNGLED EKPH L
Sbjct: 145 KAWFRHNGLEDLEKPHSL 149

BLAST of Tan0017309 vs. ExPASy TrEMBL
Match: A0A5A7UIY1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00300 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.5e-26
Identity = 67/107 (62.62%), Postives = 77/107 (71.96%), Query Frame = 0

Query: 37  SQSPSLF-----RLRAGHWAAYEKNSEEEICPTVVPDHMI-HPLSENYWSPHPQTGVFGP 96
           S SP LF       RA HW+AYEKN E+ I PT+VP+ +I H LS+NYW PHPQTGVFGP
Sbjct: 25  SHSPHLFPFANSGFRASHWSAYEKNQEDPIWPTMVPNDVIHHNLSDNYWVPHPQTGVFGP 84

Query: 97  PTQH--NNPLPNDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL 136
           P  H  ++ LPNDTS  AGG +  SVL+LK WFRHNGLED EKPH L
Sbjct: 85  PKAHHDSSTLPNDTS--AGGNEGGSVLNLKAWFRHNGLEDLEKPHSL 129

BLAST of Tan0017309 vs. ExPASy TrEMBL
Match: A0A0A0KRJ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168830 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 5.6e-26
Identity = 60/96 (62.50%), Postives = 73/96 (76.04%), Query Frame = 0

Query: 43  FRLRAGHWAAYEKNSEEEICPTVVPDHMI-HPLSENYWSPHPQTGVFGPPTQHNN--PLP 102
           F  R+ HW+AYEKN E++I PT+VP+H+I   LSE+YW PHP+TGVFGPP  H+N   +P
Sbjct: 33  FGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVP 92

Query: 103 NDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL 136
           NDTSA   G  + SVL+LK WFRHNGLED EKPH L
Sbjct: 93  NDTSA---GGNEGSVLNLKAWFRHNGLEDLEKPHTL 125

BLAST of Tan0017309 vs. TAIR 10
Match: AT5G17165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03150.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 91.3 bits (225), Expect = 6.5e-19
Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = 0

Query: 42  LFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPND 101
           LF  R  H +AY+KN EEE+ P+ VPD MI P S+ YWSPHPQTGVFGP +   N     
Sbjct: 28  LFTSRNDHTSAYDKNVEEELQPSQVPDEMIKPDSDKYWSPHPQTGVFGPSSSSTN----- 87

Query: 102 TSAAAGGPKQASVLDLKVWFRHNGLEDPEKPH 134
                 G ++ SV++ K WFR   LED +K H
Sbjct: 88  AKDEFRGGQEDSVMEEKAWFRPTSLEDLDKTH 114

BLAST of Tan0017309 vs. TAIR 10
Match: AT3G03150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17
Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 0

Query: 46  RAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAA 105
           R+GH +AY+KN E+E+  + VPD +I P S+ YWSPHP+TGVFGP T  +      ++ A
Sbjct: 38  RSGHSSAYDKNVEDELHASAVPDEVIKPDSDKYWSPHPKTGVFGPSTTEH------SATA 97

Query: 106 AGGPKQASVLDLKVWFRHNGLEDPEKPH 134
            G  +  +VL+   WFR   LED +K H
Sbjct: 98  EGAHQDTAVLEETAWFRPTSLEDSDKTH 119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
F4KFM89.2e-1848.91Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN... [more]
Match NameE-valueIdentityDescription
XP_022995249.16.9e-3964.44late embryogenesis abundant protein At5g17165-like [Cucurbita maxima][more]
XP_023532525.11.5e-3863.70late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo][more]
KAG6605657.12.6e-3862.96ATP-dependent DNA helicase SRS2-like protein, partial [Cucurbita argyrosperma su... [more]
XP_022957877.13.9e-3462.99late embryogenesis abundant protein At5g17165-like [Cucurbita moschata][more]
XP_038875585.17.2e-2856.82late embryogenesis abundant protein At5g17165-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1K5643.4e-3964.44late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1H0D31.9e-3462.99late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662... [more]
A0A1S4E6U68.6e-2755.07uncharacterized protein LOC103504694 OS=Cucumis melo OX=3656 GN=LOC103504694 PE=... [more]
A0A5A7UIY11.5e-2662.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0KRJ55.6e-2662.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168830 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G17165.16.5e-1948.91unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G03150.11.2e-1745.45unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..109
NoneNo IPR availablePANTHERPTHR35122:SF2OSJNBA0093F12.14 PROTEINcoord: 14..133
IPR039291Late embryogenesis abundant protein At5g17165-likePANTHERPTHR35122OSJNBA0093F12.14 PROTEINcoord: 14..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0017309.1Tan0017309.1mRNA