Tan0017309 (gene) Snake gourd v1

Overview


Name	Tan0017309
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	late embryogenesis abundant protein At5g17165-like
Location	LG07: 4844293 .. 4848092 (-)
RNA-Seq Expression	Tan0017309
Synteny	Tan0017309

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAATTTAACTCTCCAATTCTTCAAATATAAATCCTTTTTTAACATAAACCGTTCACTCCTCACTCCACCCATTATTCTTAAAACTAAAATCACATTAATATTCTTTTGAAAAGTTCCTCTTTTAATTTTCTTCTTTTTATCCATTGCATGGCCGCCAATTCGAATTACCTTGTTATTGTTATTGCTAGACGACTCACCGGTTTAGGGAAGCCAGTCCTTAGCCTCAGCTGGAAGAATTGGACCACCCCTTGCTCCTCTCAATCTCCCTCCCTCTTCCGCCTCCGGTACGCTTACGTCCTTTTCTTTTTTTCGCGTTTTCAGCTTTTTTTTTTTCTTTTTTTTCTTCTTTGAGATGATTCATTTTTCATCGAGAACCAGTTTTGTTATTGAGATTTGAGTCTGTTTGTCGAATTTTGTTGATATTGTAATGTGTTAGCATGTTTAGAATGTCTTTGTTTGATTTCCATTTGTTAGACGACTTTTGTTCAAATGTCCAAGTCGACAAGTGAGGAAGTATTGTATAATTAAATGGGTAATACTTGGGTGCTCAAATCTATGTTGCCCACATATTTTTTTTCTTTTTTCTTAAAAAAACACACACACACAAATCTATATTTGATTGTCTGCCCAGGCCGCACCCAAATATTTTTCTAATTAAATTTATCATAACATATCAATTTAAGTTTTTGGGTTCATTGATGATTTAACATTTGAACATGATTTATTTCAAACATACTTCTTTCCTATTTTGATGGGTTGAATTTGTTTTTGGAGGTTGTATACATAATTGATTGTTCTGTGAAAGGTTCGGTTTTGAATCAAAATGGAGAAAATAGTAAAATGAAATTGATCAACATTTTCGAGTGAGGCTAATGTCGAAATATTCCAGTGGATTAAGGTGAATTTGGCACTAGTTTTTGAAATAATAATTAAGTGTCTGCTTGGCAAAACATTTATTACCTAAGCTAAGCATGTGGATAAAATTTTGAATTTTTTACCTGAGATTGTAAGTTCATGTTGGCAGTTTGGATCAAGCTACATATAAAAGCACTATAAGTATTTTTTTTCTAAGTATTATATAGGAAGATTGAAAACTCGTCAGTAATTGACGTTTTACCTACTAATAAATTGATAAATTTAAATCGTCTCACAAAGAAGCTTATGATAATACAATACACTCCTTATTTTGATAACAATAACTACCTTTTTAGATTTTTCAAAAAAATAATAATAATAATTTTGTAGATAATTTCGGCAAGAAATTCTTTAATTATATTTGGCAAAAATAATTTCTAAAGATAATATTAAAAACCGATTAACGACTACAAAATTAATATAATATTTTAAGATTTAAATTTATAGTTGTCAAATGATTTGAATGGATATCATAGTTTATTCCTTTACTTTTTCTTTGCTTATGCTTTCCTTTGGGTTCTCTTTTAAATGAAAAAAAAAAAACTATTTCACAAAATATTATAAATAATTTCATTCAACAAATAGGAGAAATTATTTAATAAAGCTATTACAATATAGTTGACAGCTTTTGCACCATTAAATATGAGAGAAATCATCAATTACCTTTTTTTTATCCCATATATAATTATTAAGAGAAAGTTATATTGTGGTGGTTTCATTGAGTAATTTATCGACAGTGACAGTGCACTATAGAGTCTAGACAAACTCTTGAGGTCTGTTTTATTTTTATTCAAAGTTGATTTTGATCTCTTTGTAGCTAAAGGACATTATACAGCAGATCTCTTAGTCATTAAAAGAGTTATGTGTTCATTTGGCATTACACAATTTTTTTTTAATTCAATACAAATTACAAAATTTCAAAAGTTTTTTTTTAAATACAAAATTTCAACCGTTAAAATCGTATACGAACAAATTTTTATGTGTCTATATATATATATATATATATATATATATATTAAGATGTAAATTTTATAATCTACTTTCAACATTTTGACTTTTTTTCAATATTATTTTGAAAAGCTTTTCGTGTGTATATGAACATAATACTCACCTATGCTCAAATATGTCGGGGTTTAATGGCTGAGTTAAAAATTAAAAATAATTATATAGGCTCTGGTAACTATTTTGATTTTGATTTTTTGTTTTTGGAAATTAAGCTTGTAAACATTACTACTACACAATTTTCTTGCTCTGCCACATGCTCTTTAAAAATATTTTTAAAAAATCAAACCAATTTCGAGAACTTCAAAAAAAAAATTAAAACTTATTTTGGTTTTCGAAATTTGATATAAAATTAAGATGTGCTCAAATAAGGTGAAAAACTTACAAATTATGAAAAAAAAATCAACATAATTTTTAAAAACAGAAAATAAAAAATAAATAGTTATTAAACTTACCTTATTTGTTAAGTCGTAATTATTATTTATTTTAAAGAAAGGCTTGCAATCGCCTAGGTTTAGCATTAGAGCCGCATGGATTTTGATGAGCATCTTCTATATTCTGATTGATGCCTGCCTCATGCGTGTAAGGACAAAATTCATTTATTAAAGTTCTTATTTTTATTTTTATTTTTGCTAGTCTTATTATGATCTATGTGTATATTTATTTGATTTCATTGATAAATTATACCTTATAAGTCAAACTCCCTTATTGTGGTATTTAATTCAGAAAAATTGTATTTCACCACCTTTTTTGTTTTAATCTTGGATTCCAAGAATATGATAAAAACTTATTAGACATAAAATTGTTTAGACATAAAATTAAAAATTTAAAAATCTATTAAAGTTGAGTTTTATTAAACACTTTATTGATTATATTAGATATAGATGTGAAAGTTCAATTACTAAATTTGTAACTTAAAATTTTTTAAATCATGGAATTTAAAACTATGACATTTTTTCCATGATTTAAAATCATAGCAAATTGTAGTTGATATACTAGTTTTTTTTTTTTTTTTTAAAAAAAAAAACATACTACAATTGAAACAAAGAATGGGGATTTGGAAGTTGAACTATGTACAAAGTAATAATTCAACTAACAACCAATGATTTATAACATGAAGTTTATTACTCAGATTACTCCATTCTTATTTTATCTTATTCATAGTCATATTATATCAAACTATTACCCATGACAAATTATTCAATGAGACAGTCAAAAATTGTTGGATGTGGATTCAATAATTTTTCTTAAATCACCAATCAAACTAATATTAAATGGGGAGAAAATTGACTTTGCATGAATTTGAACACAATATTTTCTGGACCACCTGCTTTGATATCATCTTAAATCACATTCAAACTAAAAACTTAAACCTAATAATTTGGAGTAAATTTAATTATATCAACATAATCTAACAATTTTTATATCTCTAATAACTATTAGATATAAATCGAAGTACTTATCTCTCCATTCAACGGTGAAAAATCGTTAGTCCAACCAACATGACAAAAACACTGAAAATAACGTGAATCCAAATTGAAAAGTCCAACGACATAGACATAAAAATAACGCAACCAACTTTTTTTTTTTTTTTTTTGTAGGGCAGGTCATTGGGCAGCATATGAGAAGAACTCAGAGGAGGAAATTTGCCCTACAGTGGTACCAGATCATATGATCCACCCTCTCTCTGAAAACTACTGGTCGCCACATCCACAAACTGGAGTTTTTGGGCCACCAACTCAACACAATAATCCTCTTCCGAACGACACGTCGGCTGCTGCTGGTGGCCCTAAACAAGCCTCAGTTTTGGACCTCAAGGTTTGGTTCCGACACAACGGCCTCGAGGACCCTGAGAAGCCACATTTTCTGTGATCTCCACGCC

mRNA sequence

CTAATTTAACTCTCCAATTCTTCAAATATAAATCCTTTTTTAACATAAACCGTTCACTCCTCACTCCACCCATTATTCTTAAAACTAAAATCACATTAATATTCTTTTGAAAAGTTCCTCTTTTAATTTTCTTCTTTTTATCCATTGCATGGCCGCCAATTCGAATTACCTTGTTATTGTTATTGCTAGACGACTCACCGGTTTAGGGAAGCCAGTCCTTAGCCTCAGCTGGAAGAATTGGACCACCCCTTGCTCCTCTCAATCTCCCTCCCTCTTCCGCCTCCGGGCAGGTCATTGGGCAGCATATGAGAAGAACTCAGAGGAGGAAATTTGCCCTACAGTGGTACCAGATCATATGATCCACCCTCTCTCTGAAAACTACTGGTCGCCACATCCACAAACTGGAGTTTTTGGGCCACCAACTCAACACAATAATCCTCTTCCGAACGACACGTCGGCTGCTGCTGGTGGCCCTAAACAAGCCTCAGTTTTGGACCTCAAGGTTTGGTTCCGACACAACGGCCTCGAGGACCCTGAGAAGCCACATTTTCTGTGATCTCCACGCC

Coding sequence (CDS)

ATGGCCGCCAATTCGAATTACCTTGTTATTGTTATTGCTAGACGACTCACCGGTTTAGGGAAGCCAGTCCTTAGCCTCAGCTGGAAGAATTGGACCACCCCTTGCTCCTCTCAATCTCCCTCCCTCTTCCGCCTCCGGGCAGGTCATTGGGCAGCATATGAGAAGAACTCAGAGGAGGAAATTTGCCCTACAGTGGTACCAGATCATATGATCCACCCTCTCTCTGAAAACTACTGGTCGCCACATCCACAAACTGGAGTTTTTGGGCCACCAACTCAACACAATAATCCTCTTCCGAACGACACGTCGGCTGCTGCTGGTGGCCCTAAACAAGCCTCAGTTTTGGACCTCAAGGTTTGGTTCCGACACAACGGCCTCGAGGACCCTGAGAAGCCACATTTTCTGTGA

Protein sequence

MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL

Homology

[Close]

BLAST of Tan0017309 vs. ExPASy Swiss-Prot
Match: F4KFM8 (Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN=At5g17165 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 9.2e-18
Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 42  LFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPND 101
           LF  R  H +AY+KN EEE+ P+ VPD MI P S+ YWSPHPQTGVFGP +   N     
Sbjct: 28  LFTSRNDHTSAYDKNVEEELQPSQVPDEMIKPDSDKYWSPHPQTGVFGPSSSSTN----- 87

Query: 102 TSAAAGGPKQASVLDLKVWFRHNGLEDPEKPH 134
                 G ++ SV++ K WFR   LED +K H
Sbjct: 88  AKDEFRGGQEDSVMEEKAWFRPTSLEDLDKTH 114

[Close]

BLAST of Tan0017309 vs. NCBI nr
Match: XP_022995249.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita maxima])

HSP 1 Score: 171.0 bits (432), Expect = 6.9e-39
Identity = 87/135 (64.44%), Postives = 98/135 (72.59%), Query Frame = 0


Query: 1   MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEE 60
           MAA SN L+I    RL  L  PV  L            SPSLF LRAGHW+AYEKN EEE
Sbjct: 1   MAAASN-LIIAARPRLAHLRNPVRRL------------SPSLFTLRAGHWSAYEKNPEEE 60

Query: 61  ICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVW 120
           +CPTVVPDHMIH +SE+YW+PHPQTGVFGPP   +NP+P+DTS  AGG K+ SVL+LKVW
Sbjct: 61  VCPTVVPDHMIHSISEDYWAPHPQTGVFGPPISQHNPVPSDTS--AGGAKEGSVLELKVW 120

Query: 121 FRHNGLEDPEKPHFL 136
           FRH  LEDPEKPH L
Sbjct: 121 FRHIELEDPEKPHDL 120

[Close]

BLAST of Tan0017309 vs. NCBI nr
Match: XP_023532525.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.9 bits (429), Expect = 1.5e-38
Identity = 86/135 (63.70%), Postives = 98/135 (72.59%), Query Frame = 0


Query: 1   MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEE 60
           MAA SN L+I    RL  L  P+  L            SPSLF LRAGHW+AYEKN EEE
Sbjct: 1   MAAASN-LIIAARPRLAHLRNPLRRL------------SPSLFTLRAGHWSAYEKNPEEE 60

Query: 61  ICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVW 120
           +CPTVVPDHMIH +SE+YW+PHPQTGVFGPP   +NP+P+DTS  AGG K+ SVL+LKVW
Sbjct: 61  VCPTVVPDHMIHSISEDYWAPHPQTGVFGPPITQHNPVPSDTS--AGGAKEGSVLELKVW 120

Query: 121 FRHNGLEDPEKPHFL 136
           FRH  LEDPEKPH L
Sbjct: 121 FRHVELEDPEKPHAL 120

[Close]

BLAST of Tan0017309 vs. NCBI nr
Match: KAG6605657.1 (ATP-dependent DNA helicase SRS2-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 169.1 bits (427), Expect = 2.6e-38
Identity = 85/135 (62.96%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 1   MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEE 60
           MAA SN L+I    RL     P+  L            SPSLF LRAGHW+AYEKN EEE
Sbjct: 1   MAAASN-LIIAARPRLAHFRNPLRRL------------SPSLFTLRAGHWSAYEKNPEEE 60

Query: 61  ICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVW 120
           +CPTVVPDHM+H LSE+YW+PHPQTGVFGPPT  +NP+P+DTS   GG K+ SVL+LKVW
Sbjct: 61  VCPTVVPDHMLHSLSEDYWAPHPQTGVFGPPTTQHNPVPSDTS--GGGAKEGSVLELKVW 120

Query: 121 FRHNGLEDPEKPHFL 136
           FRH  LEDPEKPH L
Sbjct: 121 FRHVELEDPEKPHSL 120

[Close]

BLAST of Tan0017309 vs. NCBI nr
Match: XP_022957877.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita moschata])

HSP 1 Score: 155.2 bits (391), Expect = 3.9e-34
Identity = 80/127 (62.99%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 1   MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEE 60
           MAA SN L+I    RL  L  P+  L            SPSLF LRAGHW+AYEKN EEE
Sbjct: 1   MAAASN-LIIAARPRLAHLRNPLRRL------------SPSLFTLRAGHWSAYEKNPEEE 60

Query: 61  ICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVW 120
           +CPTVVPDHMIH LSE+YW+PHPQTGVFGPP   +NP+P+DTS  AGG K+ SVL+LKVW
Sbjct: 61  VCPTVVPDHMIHSLSEDYWAPHPQTGVFGPPITQHNPVPSDTS--AGGAKEGSVLELKVW 112

Query: 121 FRHNGLE 128
           FRH  LE
Sbjct: 121 FRHVELE 112

[Close]

BLAST of Tan0017309 vs. NCBI nr
Match: XP_038875585.1 (late embryogenesis abundant protein At5g17165-like [Benincasa hispida])

HSP 1 Score: 134.4 bits (337), Expect = 7.2e-28
Identity = 75/132 (56.82%), Postives = 90/132 (68.18%), Query Frame = 0


Query: 5   SNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPS-LFRLRAGHWAAYEKNSEEEICP 64
           S++ +I+ + R   L  P  SLS        S   PS  F LRA HW+AYEKN EE+I P
Sbjct: 3   SSWRIIIASPRFL-LSSPPSSLSH-------SHLFPSATFLLRASHWSAYEKNPEEQIWP 62

Query: 65  TVVPDHMIHP-LSENYWSPHPQTGVFGPPTQH--NNPLPNDTSAAAGGPKQASVLDLKVW 124
           TVVPDH+IH  +SENYW+PHP+TGVFGPP  H   + +PNDTSA   G K+ SVLD+K W
Sbjct: 63  TVVPDHVIHTNISENYWAPHPETGVFGPPIAHQSTSAVPNDTSA---GGKEDSVLDIKAW 122

Query: 125 FRHNGLEDPEKP 133
           FRHNGLED EKP
Sbjct: 123 FRHNGLEDLEKP 123

[Close]

BLAST of Tan0017309 vs. ExPASy TrEMBL
Match: A0A6J1K564 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 GN=LOC111490853 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.4e-39
Identity = 87/135 (64.44%), Postives = 98/135 (72.59%), Query Frame = 0


Query: 1   MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEE 60
           MAA SN L+I    RL  L  PV  L            SPSLF LRAGHW+AYEKN EEE
Sbjct: 1   MAAASN-LIIAARPRLAHLRNPVRRL------------SPSLFTLRAGHWSAYEKNPEEE 60

Query: 61  ICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVW 120
           +CPTVVPDHMIH +SE+YW+PHPQTGVFGPP   +NP+P+DTS  AGG K+ SVL+LKVW
Sbjct: 61  VCPTVVPDHMIHSISEDYWAPHPQTGVFGPPISQHNPVPSDTS--AGGAKEGSVLELKVW 120

Query: 121 FRHNGLEDPEKPHFL 136
           FRH  LEDPEKPH L
Sbjct: 121 FRHIELEDPEKPHDL 120

[Close]

BLAST of Tan0017309 vs. ExPASy TrEMBL
Match: A0A6J1H0D3 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662 GN=LOC111459285 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.9e-34
Identity = 80/127 (62.99%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 1   MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEE 60
           MAA SN L+I    RL  L  P+  L            SPSLF LRAGHW+AYEKN EEE
Sbjct: 1   MAAASN-LIIAARPRLAHLRNPLRRL------------SPSLFTLRAGHWSAYEKNPEEE 60

Query: 61  ICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVW 120
           +CPTVVPDHMIH LSE+YW+PHPQTGVFGPP   +NP+P+DTS  AGG K+ SVL+LKVW
Sbjct: 61  VCPTVVPDHMIHSLSEDYWAPHPQTGVFGPPITQHNPVPSDTS--AGGAKEGSVLELKVW 112

Query: 121 FRHNGLE 128
           FRH  LE
Sbjct: 121 FRHVELE 112

[Close]

BLAST of Tan0017309 vs. ExPASy TrEMBL
Match: A0A1S4E6U6 (uncharacterized protein LOC103504694 OS=Cucumis melo OX=3656 GN=LOC103504694 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 8.6e-27
Identity = 76/138 (55.07%), Postives = 87/138 (63.04%), Query Frame = 0


Query: 6   NYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLF-----RLRAGHWAAYEKNSEEE 65
           N  +IV+A   T    P LSL          S SP LF       RA HW+AYEKN E+ 
Sbjct: 25  NSKIIVVA--FTTAAAPRLSL--------LVSHSPHLFPFANSGFRASHWSAYEKNQEDP 84

Query: 66  ICPTVVPDHMI-HPLSENYWSPHPQTGVFGPPTQHNN--PLPNDTSAAAGGPKQASVLDL 125
           I PT+VP+ +I H LS+NYW PHPQTGVFGPP  H+N   LPNDTSA   G  + SVL+L
Sbjct: 85  IWPTMVPNDVIHHNLSDNYWVPHPQTGVFGPPKAHHNSSTLPNDTSA---GGNEGSVLNL 144

Query: 126 KVWFRHNGLEDPEKPHFL 136
           K WFRHNGLED EKPH L
Sbjct: 145 KAWFRHNGLEDLEKPHSL 149

[Close]

BLAST of Tan0017309 vs. ExPASy TrEMBL
Match: A0A5A7UIY1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00300 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.5e-26
Identity = 67/107 (62.62%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 37  SQSPSLF-----RLRAGHWAAYEKNSEEEICPTVVPDHMI-HPLSENYWSPHPQTGVFGP 96
           S SP LF       RA HW+AYEKN E+ I PT+VP+ +I H LS+NYW PHPQTGVFGP
Sbjct: 25  SHSPHLFPFANSGFRASHWSAYEKNQEDPIWPTMVPNDVIHHNLSDNYWVPHPQTGVFGP 84

Query: 97  PTQH--NNPLPNDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL 136
           P  H  ++ LPNDTS  AGG +  SVL+LK WFRHNGLED EKPH L
Sbjct: 85  PKAHHDSSTLPNDTS--AGGNEGGSVLNLKAWFRHNGLEDLEKPHSL 129

[Close]

BLAST of Tan0017309 vs. ExPASy TrEMBL
Match: A0A0A0KRJ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168830 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 5.6e-26
Identity = 60/96 (62.50%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 43  FRLRAGHWAAYEKNSEEEICPTVVPDHMI-HPLSENYWSPHPQTGVFGPPTQHNN--PLP 102
           F  R+ HW+AYEKN E++I PT+VP+H+I   LSE+YW PHP+TGVFGPP  H+N   +P
Sbjct: 33  FGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVP 92

Query: 103 NDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL 136
           NDTSA   G  + SVL+LK WFRHNGLED EKPH L
Sbjct: 93  NDTSA---GGNEGSVLNLKAWFRHNGLEDLEKPHTL 125

[Close]

BLAST of Tan0017309 vs. TAIR 10
Match: AT5G17165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03150.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 91.3 bits (225), Expect = 6.5e-19
Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 42  LFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPND 101
           LF  R  H +AY+KN EEE+ P+ VPD MI P S+ YWSPHPQTGVFGP +   N     
Sbjct: 28  LFTSRNDHTSAYDKNVEEELQPSQVPDEMIKPDSDKYWSPHPQTGVFGPSSSSTN----- 87

Query: 102 TSAAAGGPKQASVLDLKVWFRHNGLEDPEKPH 134
                 G ++ SV++ K WFR   LED +K H
Sbjct: 88  AKDEFRGGQEDSVMEEKAWFRPTSLEDLDKTH 114

[Close]

BLAST of Tan0017309 vs. TAIR 10
Match: AT3G03150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17
Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 46  RAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAA 105
           R+GH +AY+KN E+E+  + VPD +I P S+ YWSPHP+TGVFGP T  +      ++ A
Sbjct: 38  RSGHSSAYDKNVEDELHASAVPDEVIKPDSDKYWSPHPKTGVFGPSTTEH------SATA 97

Query: 106 AGGPKQASVLDLKVWFRHNGLEDPEKPH 134
            G  +  +VL+   WFR   LED +K H
Sbjct: 98  EGAHQDTAVLEETAWFRPTSLEDSDKTH 119

The following BLAST results are available for this feature:

BLAST of Tan0017309 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4KFM8	9.2e-18	48.91	Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Tan0017309 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022995249.1	6.9e-39	64.44	late embryogenesis abundant protein At5g17165-like [Cucurbita maxima]	[more]
XP_023532525.1	1.5e-38	63.70	late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo]	[more]
KAG6605657.1	2.6e-38	62.96	ATP-dependent DNA helicase SRS2-like protein, partial [Cucurbita argyrosperma su...	[more]
XP_022957877.1	3.9e-34	62.99	late embryogenesis abundant protein At5g17165-like [Cucurbita moschata]	[more]
XP_038875585.1	7.2e-28	56.82	late embryogenesis abundant protein At5g17165-like [Benincasa hispida]	[more]

BLAST of Tan0017309 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K564	3.4e-39	64.44	late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1H0D3	1.9e-34	62.99	late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662...	[more]
A0A1S4E6U6	8.6e-27	55.07	uncharacterized protein LOC103504694 OS=Cucumis melo OX=3656 GN=LOC103504694 PE=...	[more]
A0A5A7UIY1	1.5e-26	62.62	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KRJ5	5.6e-26	62.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168830 PE=4 SV=1	[more]

BLAST of Tan0017309 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17165.1	6.5e-19	48.91	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G03150.1	1.2e-17	45.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..109
None	No IPR available	PANTHER	PTHR35122:SF2	OSJNBA0093F12.14 PROTEIN	coord: 14..133
IPR039291	Late embryogenesis abundant protein At5g17165-like	PANTHER	PTHR35122	OSJNBA0093F12.14 PROTEIN	coord: 14..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0017309.1	Tan0017309.1	mRNA