Tan0017309 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAATTTAACTCTCCAATTCTTCAAATATAAATCCTTTTTTAACATAAACCGTTCACTCCTCACTCCACCCATTATTCTTAAAACTAAAATCACATTAATATTCTTTTGAAAAGTTCCTCTTTTAATTTTCTTCTTTTTATCCATTGCATGGCCGCCAATTCGAATTACCTTGTTATTGTTATTGCTAGACGACTCACCGGTTTAGGGAAGCCAGTCCTTAGCCTCAGCTGGAAGAATTGGACCACCCCTTGCTCCTCTCAATCTCCCTCCCTCTTCCGCCTCCGGTACGCTTACGTCCTTTTCTTTTTTTCGCGTTTTCAGCTTTTTTTTTTTCTTTTTTTTCTTCTTTGAGATGATTCATTTTTCATCGAGAACCAGTTTTGTTATTGAGATTTGAGTCTGTTTGTCGAATTTTGTTGATATTGTAATGTGTTAGCATGTTTAGAATGTCTTTGTTTGATTTCCATTTGTTAGACGACTTTTGTTCAAATGTCCAAGTCGACAAGTGAGGAAGTATTGTATAATTAAATGGGTAATACTTGGGTGCTCAAATCTATGTTGCCCACATATTTTTTTTCTTTTTTCTTAAAAAAACACACACACACAAATCTATATTTGATTGTCTGCCCAGGCCGCACCCAAATATTTTTCTAATTAAATTTATCATAACATATCAATTTAAGTTTTTGGGTTCATTGATGATTTAACATTTGAACATGATTTATTTCAAACATACTTCTTTCCTATTTTGATGGGTTGAATTTGTTTTTGGAGGTTGTATACATAATTGATTGTTCTGTGAAAGGTTCGGTTTTGAATCAAAATGGAGAAAATAGTAAAATGAAATTGATCAACATTTTCGAGTGAGGCTAATGTCGAAATATTCCAGTGGATTAAGGTGAATTTGGCACTAGTTTTTGAAATAATAATTAAGTGTCTGCTTGGCAAAACATTTATTACCTAAGCTAAGCATGTGGATAAAATTTTGAATTTTTTACCTGAGATTGTAAGTTCATGTTGGCAGTTTGGATCAAGCTACATATAAAAGCACTATAAGTATTTTTTTTCTAAGTATTATATAGGAAGATTGAAAACTCGTCAGTAATTGACGTTTTACCTACTAATAAATTGATAAATTTAAATCGTCTCACAAAGAAGCTTATGATAATACAATACACTCCTTATTTTGATAACAATAACTACCTTTTTAGATTTTTCAAAAAAATAATAATAATAATTTTGTAGATAATTTCGGCAAGAAATTCTTTAATTATATTTGGCAAAAATAATTTCTAAAGATAATATTAAAAACCGATTAACGACTACAAAATTAATATAATATTTTAAGATTTAAATTTATAGTTGTCAAATGATTTGAATGGATATCATAGTTTATTCCTTTACTTTTTCTTTGCTTATGCTTTCCTTTGGGTTCTCTTTTAAATGAAAAAAAAAAAACTATTTCACAAAATATTATAAATAATTTCATTCAACAAATAGGAGAAATTATTTAATAAAGCTATTACAATATAGTTGACAGCTTTTGCACCATTAAATATGAGAGAAATCATCAATTACCTTTTTTTTATCCCATATATAATTATTAAGAGAAAGTTATATTGTGGTGGTTTCATTGAGTAATTTATCGACAGTGACAGTGCACTATAGAGTCTAGACAAACTCTTGAGGTCTGTTTTATTTTTATTCAAAGTTGATTTTGATCTCTTTGTAGCTAAAGGACATTATACAGCAGATCTCTTAGTCATTAAAAGAGTTATGTGTTCATTTGGCATTACACAATTTTTTTTTAATTCAATACAAATTACAAAATTTCAAAAGTTTTTTTTTAAATACAAAATTTCAACCGTTAAAATCGTATACGAACAAATTTTTATGTGTCTATATATATATATATATATATATATATATATTAAGATGTAAATTTTATAATCTACTTTCAACATTTTGACTTTTTTTCAATATTATTTTGAAAAGCTTTTCGTGTGTATATGAACATAATACTCACCTATGCTCAAATATGTCGGGGTTTAATGGCTGAGTTAAAAATTAAAAATAATTATATAGGCTCTGGTAACTATTTTGATTTTGATTTTTTGTTTTTGGAAATTAAGCTTGTAAACATTACTACTACACAATTTTCTTGCTCTGCCACATGCTCTTTAAAAATATTTTTAAAAAATCAAACCAATTTCGAGAACTTCAAAAAAAAAATTAAAACTTATTTTGGTTTTCGAAATTTGATATAAAATTAAGATGTGCTCAAATAAGGTGAAAAACTTACAAATTATGAAAAAAAAATCAACATAATTTTTAAAAACAGAAAATAAAAAATAAATAGTTATTAAACTTACCTTATTTGTTAAGTCGTAATTATTATTTATTTTAAAGAAAGGCTTGCAATCGCCTAGGTTTAGCATTAGAGCCGCATGGATTTTGATGAGCATCTTCTATATTCTGATTGATGCCTGCCTCATGCGTGTAAGGACAAAATTCATTTATTAAAGTTCTTATTTTTATTTTTATTTTTGCTAGTCTTATTATGATCTATGTGTATATTTATTTGATTTCATTGATAAATTATACCTTATAAGTCAAACTCCCTTATTGTGGTATTTAATTCAGAAAAATTGTATTTCACCACCTTTTTTGTTTTAATCTTGGATTCCAAGAATATGATAAAAACTTATTAGACATAAAATTGTTTAGACATAAAATTAAAAATTTAAAAATCTATTAAAGTTGAGTTTTATTAAACACTTTATTGATTATATTAGATATAGATGTGAAAGTTCAATTACTAAATTTGTAACTTAAAATTTTTTAAATCATGGAATTTAAAACTATGACATTTTTTCCATGATTTAAAATCATAGCAAATTGTAGTTGATATACTAGTTTTTTTTTTTTTTTTTAAAAAAAAAAACATACTACAATTGAAACAAAGAATGGGGATTTGGAAGTTGAACTATGTACAAAGTAATAATTCAACTAACAACCAATGATTTATAACATGAAGTTTATTACTCAGATTACTCCATTCTTATTTTATCTTATTCATAGTCATATTATATCAAACTATTACCCATGACAAATTATTCAATGAGACAGTCAAAAATTGTTGGATGTGGATTCAATAATTTTTCTTAAATCACCAATCAAACTAATATTAAATGGGGAGAAAATTGACTTTGCATGAATTTGAACACAATATTTTCTGGACCACCTGCTTTGATATCATCTTAAATCACATTCAAACTAAAAACTTAAACCTAATAATTTGGAGTAAATTTAATTATATCAACATAATCTAACAATTTTTATATCTCTAATAACTATTAGATATAAATCGAAGTACTTATCTCTCCATTCAACGGTGAAAAATCGTTAGTCCAACCAACATGACAAAAACACTGAAAATAACGTGAATCCAAATTGAAAAGTCCAACGACATAGACATAAAAATAACGCAACCAACTTTTTTTTTTTTTTTTTTGTAGGGCAGGTCATTGGGCAGCATATGAGAAGAACTCAGAGGAGGAAATTTGCCCTACAGTGGTACCAGATCATATGATCCACCCTCTCTCTGAAAACTACTGGTCGCCACATCCACAAACTGGAGTTTTTGGGCCACCAACTCAACACAATAATCCTCTTCCGAACGACACGTCGGCTGCTGCTGGTGGCCCTAAACAAGCCTCAGTTTTGGACCTCAAGGTTTGGTTCCGACACAACGGCCTCGAGGACCCTGAGAAGCCACATTTTCTGTGATCTCCACGCC CTAATTTAACTCTCCAATTCTTCAAATATAAATCCTTTTTTAACATAAACCGTTCACTCCTCACTCCACCCATTATTCTTAAAACTAAAATCACATTAATATTCTTTTGAAAAGTTCCTCTTTTAATTTTCTTCTTTTTATCCATTGCATGGCCGCCAATTCGAATTACCTTGTTATTGTTATTGCTAGACGACTCACCGGTTTAGGGAAGCCAGTCCTTAGCCTCAGCTGGAAGAATTGGACCACCCCTTGCTCCTCTCAATCTCCCTCCCTCTTCCGCCTCCGGGCAGGTCATTGGGCAGCATATGAGAAGAACTCAGAGGAGGAAATTTGCCCTACAGTGGTACCAGATCATATGATCCACCCTCTCTCTGAAAACTACTGGTCGCCACATCCACAAACTGGAGTTTTTGGGCCACCAACTCAACACAATAATCCTCTTCCGAACGACACGTCGGCTGCTGCTGGTGGCCCTAAACAAGCCTCAGTTTTGGACCTCAAGGTTTGGTTCCGACACAACGGCCTCGAGGACCCTGAGAAGCCACATTTTCTGTGATCTCCACGCC ATGGCCGCCAATTCGAATTACCTTGTTATTGTTATTGCTAGACGACTCACCGGTTTAGGGAAGCCAGTCCTTAGCCTCAGCTGGAAGAATTGGACCACCCCTTGCTCCTCTCAATCTCCCTCCCTCTTCCGCCTCCGGGCAGGTCATTGGGCAGCATATGAGAAGAACTCAGAGGAGGAAATTTGCCCTACAGTGGTACCAGATCATATGATCCACCCTCTCTCTGAAAACTACTGGTCGCCACATCCACAAACTGGAGTTTTTGGGCCACCAACTCAACACAATAATCCTCTTCCGAACGACACGTCGGCTGCTGCTGGTGGCCCTAAACAAGCCTCAGTTTTGGACCTCAAGGTTTGGTTCCGACACAACGGCCTCGAGGACCCTGAGAAGCCACATTTTCTGTGA MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL Homology
BLAST of Tan0017309 vs. ExPASy Swiss-Prot
Match: F4KFM8 (Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN=At5g17165 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 9.2e-18 Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = 0
BLAST of Tan0017309 vs. NCBI nr
Match: XP_022995249.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita maxima]) HSP 1 Score: 171.0 bits (432), Expect = 6.9e-39 Identity = 87/135 (64.44%), Postives = 98/135 (72.59%), Query Frame = 0
BLAST of Tan0017309 vs. NCBI nr
Match: XP_023532525.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 169.9 bits (429), Expect = 1.5e-38 Identity = 86/135 (63.70%), Postives = 98/135 (72.59%), Query Frame = 0
BLAST of Tan0017309 vs. NCBI nr
Match: KAG6605657.1 (ATP-dependent DNA helicase SRS2-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 169.1 bits (427), Expect = 2.6e-38 Identity = 85/135 (62.96%), Postives = 97/135 (71.85%), Query Frame = 0
BLAST of Tan0017309 vs. NCBI nr
Match: XP_022957877.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita moschata]) HSP 1 Score: 155.2 bits (391), Expect = 3.9e-34 Identity = 80/127 (62.99%), Postives = 91/127 (71.65%), Query Frame = 0
BLAST of Tan0017309 vs. NCBI nr
Match: XP_038875585.1 (late embryogenesis abundant protein At5g17165-like [Benincasa hispida]) HSP 1 Score: 134.4 bits (337), Expect = 7.2e-28 Identity = 75/132 (56.82%), Postives = 90/132 (68.18%), Query Frame = 0
BLAST of Tan0017309 vs. ExPASy TrEMBL
Match: A0A6J1K564 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 GN=LOC111490853 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 3.4e-39 Identity = 87/135 (64.44%), Postives = 98/135 (72.59%), Query Frame = 0
BLAST of Tan0017309 vs. ExPASy TrEMBL
Match: A0A6J1H0D3 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662 GN=LOC111459285 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.9e-34 Identity = 80/127 (62.99%), Postives = 91/127 (71.65%), Query Frame = 0
BLAST of Tan0017309 vs. ExPASy TrEMBL
Match: A0A1S4E6U6 (uncharacterized protein LOC103504694 OS=Cucumis melo OX=3656 GN=LOC103504694 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 8.6e-27 Identity = 76/138 (55.07%), Postives = 87/138 (63.04%), Query Frame = 0
BLAST of Tan0017309 vs. ExPASy TrEMBL
Match: A0A5A7UIY1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00300 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.5e-26 Identity = 67/107 (62.62%), Postives = 77/107 (71.96%), Query Frame = 0
BLAST of Tan0017309 vs. ExPASy TrEMBL
Match: A0A0A0KRJ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168830 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 5.6e-26 Identity = 60/96 (62.50%), Postives = 73/96 (76.04%), Query Frame = 0
BLAST of Tan0017309 vs. TAIR 10
Match: AT5G17165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03150.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 91.3 bits (225), Expect = 6.5e-19 Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = 0
BLAST of Tan0017309 vs. TAIR 10
Match: AT3G03150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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