Tan0017246 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGCAATGGAGTTTGTTACTTGCAGTGAGTGAGTGAGTGGAACTGAGATCGAAATGTTGTGCAGAAGAATCTCCAGCAATGGCGATTCCGGATCCGCTCCAGTGTACCTCAATGTGTACGATCTGACGCCCATTAATGGCTATGCATATTGGTTTGGCCTCGGTGTTTTTCATTCTGGTGTTCAAGGTTTGTTCTAATTCAAGCTTCTCTTCGTTCTAATTCATCGATTTTTCTGCTGGAATCTCCAGCAATAGATCTGCATTCTGATTTCTGATGCTGAATTTGGGTTTGGTGCTTGTTGACTGATGAATCCACTTTCGACGAGTTCTGTTTTGCTTCTGTTTGGTTGCTGAGAAAACGGGGGGAAATTGATTGAACTTCGAGGTTTTTGCTTTACAGGTTCTTGTTAGTGTGATTTTATCTCTTGTAGAATTTTTCCCGATATTTTCTCGACCTCCCATTTTGATGGGTTCTGTTTGGATGGTGAGAAACTGATGGAAAATTTGACGAACTTCGAGGTTAATTTTTACTTTTAGTGAACTTGTTTGATGTTCTTGAAGTATAATTTGCCCTTAGACAATCTTTCCTGCTGTTTTCTGGACCTCCATTTTGATGGGTTCTGTTTGGATACTGAGAAAATAATGGAAAATTATACGAACTTCGAGGTTAATTTTTACTTTTAGTGCACTTGTTGGCTGTTCTTGAAGTATAATTTGCTCTTGGACAATCTTTCCTGCTGTTTTCTGGACCTCCATTTTGATGGGCTCTGTTTGGATGGTGATAAAATGATGGAAAATTAGACGAACTTCTAGGTTTTTACTCTTATGAACTTGTTGATTGTTCTTGAACTACAATTTACTCTTGGACAATCTTTCATTTTCATGGGTTCTGTTTGGTTGCTGAGAAAAGGAAGGAAAATTGAACGAACGTTGAGGTTTTTACTTCTTGAACTAAAATTTAGTTTTGGAAATTCTTTTCTGCTGTTTTCTGGACCTTCATGTTGATGGGTTCTGTTTGGTTGCTGAGAAAATGAAGGAAAATTGAATGAACTTTGAGGTTTTCTTTTACTTTCAGTATAATTTAGTCTTGGAAACTCTTTTCTACTGTTTCCTGGACCTCCATTTTTCATCTGAAACTAAAAAATCTATGGGATTCTGATGCAGTTCATGGAATTGAATTTGCATTTGGGGCTCATGAATATCCAAGCACAGGGATATTTGAAGGGGAACCGAAGCAATGTGATGGATTCAAGTTCAGAAAATCGATTTTGATTGGGAAAACAGATTTGAGTCAAGCAGAAGTGAGATCATTAATGGAGGAACTTAGTAAAGATTACAGAGGAAATGCTTATAATCTAATCACCAAAAATTGCAACCATTTTTGCAATCATGTTTGCATCAAACTCACTGGAAATTCCATTCCAAATTGGGTCAATCGCCTTGCTAGGATTGGTAAGATCCAACTTCAGTTCCTGCTTTGATCTAAATTTACATTTCCTTTTCTACTTCTTGCTGTTTTATTCTCTTGGAACTCTGACTTTAAATATTTTATTTTAGACTAGATTACAATTGTTTCAAAATATCTTTATTTTTTCAAAACTTGCAATATTAGCCTTAATCTTTCGTAAATGTTTCAAAACCGCCCTTGATGTTTAGAAAAATCATTAGAATGTTGAATGTCGACATGTTTGAATGTCGTTCTTTCAGACTTGATCCAGACAAGTATCATAGTCACCGTCATATCGATTTTTCTTTTAACATTCTAATGGATTTCAACTCTAATGGCAGTTTTGAAACATTTATGAAAGACAATGATAATATTGTAACTTTTGAAAGAATTGGGGTATTTTGAAACATTTAGGCCTCCTTTGATAACCATTTAATTTTTTGTTTTTGAAAATTATGTTTGATTTCTCATCATTACTCGACAACTCTCTATCATGGTTTTCATCTTTCTTAAGAAAACATTTGAATTCTTAGCCAGATTTCAAAAATAAAAATAAATTTTTGAAAACTACTTTTTTTTTTTTAGTTTTCAAAACTTGAGTTGGTTTTTGGAAATATATGTACAAAGTGGATAACAATATAAGAAAACCCATAGGTGGTGGGAGTAGTATTTATAAGCTTAATTTTTAAAAACAAAAAACCAAAAATCATATAGTTTTCAAATGAGGCTTTAGTTTTTTAACTTTTGTTGCGTCTAAAACTCTTTGAATTTTAAAAAGTGTGTAATATATAGGTCCATGAACTTTCATTTTGTTTCTTATAGGTCTTGAACTTTCAATCTTGTTTTTTATAGGTCTTTGAACCTTCAATCGTGTGTCTAATAGGGGAATGAACTTAAAAAATGTCAAATAGATTAAAGATCTATTGAACACATATAGAAAATTTAAAGATGTATTAAAGACCTTCTAGGGACCAAATACACACAACCCCTTATACAACCTACTAAACTTATAATTTAACCTTTAACATATATCATAACAAATCTTTTTATTCATTTAACTGAAGAACAAGCATTTGTATTGGCTAGGATTCGAGTCTCTAAACGAATTTAGGACTAATGAAAAATAAACTATCTAGACTATATAAGTTTTGTGTATTGGCTAGGGTCTATTTGGGTGCATGTTATAATAACGTGTGTTATAGTAATCTATGAATGACTCTATACTTCAAACACAAACTAAAAAACTCTATATCTTAAACACGTATTATATAACTCACAAACTATTATAACTCACTCAGCATCTTAAACAACTCTTAAAAGTTTAGAGATCAAAACGAAATAAGTATGGTGAGGATTTAAAGCATTTCTATTTGTCTCTGTCAATGATTGTGTTTGTGAAGATTTTTTGAGATGGGGTTTTGGAATGCAGGGTGGATTTGCAACTGTGTTTTACCAGCAACCTTAAACTCCACAAAATTTGGACAAAACAGAGTGCAAAAAAAGACAAGTGAAGAAAAACAACAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGGAATCCCCAATAACAGTTGAAATTGCAGCTTCTAATTCTTCTTCTTCTTCTTCTTCTTCTCCAACAATTCTTCGCAGAGGCAGAAGCAGAACCAGACGCCCTCGTCCCCAAAGTTCACCATTGATTCCCACTTCAAATTCTTGAGGTTTTTAGCTATTATTACCCTTCTCTCTCTCTAAAAAATGCATTTTGGGGGGGGTATTTTAGTGATTATGTAAATTGTGTATTATTAGGCAAAGTGGGTTTTGTTTGTCTCTGCAATGTTTTCCTTTTTATCCCACCATTAATGTCCCCCATTTTCTTGGATCTTCTTGAGCTGCCATTAAAGTTACAGGCTGGGTTTTGAATTCCCAAGTGAGTTGTGGATTGAGAATCCAAATTTGGATGATATTTC CAGCAATGGAGTTTGTTACTTGCAGTGAGTGAGTGAGTGGAACTGAGATCGAAATGTTGTGCAGAAGAATCTCCAGCAATGGCGATTCCGGATCCGCTCCAGTGTACCTCAATGTGTACGATCTGACGCCCATTAATGGCTATGCATATTGGTTTGGCCTCGGTGTTTTTCATTCTGGTGTTCAAGTTCATGGAATTGAATTTGCATTTGGGGCTCATGAATATCCAAGCACAGGGATATTTGAAGGGGAACCGAAGCAATGTGATGGATTCAAGTTCAGAAAATCGATTTTGATTGGGAAAACAGATTTGAGTCAAGCAGAAGTGAGATCATTAATGGAGGAACTTAGTAAAGATTACAGAGGAAATGCTTATAATCTAATCACCAAAAATTGCAACCATTTTTGCAATCATGTTTGCATCAAACTCACTGGAAATTCCATTCCAAATTGGGTCAATCGCCTTGCTAGGATTGGGTGGATTTGCAACTGTGTTTTACCAGCAACCTTAAACTCCACAAAATTTGGACAAAACAGAGTGCAAAAAAAGACAAGTGAAGAAAAACAACAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGGAATCCCCAATAACAGTTGAAATTGCAGCTTCTAATTCTTCTTCTTCTTCTTCTTCTTCTCCAACAATTCTTCGCAGAGGCAGAAGCAGAACCAGACGCCCTCGTCCCCAAAGTTCACCATTGATTCCCACTTCAAATTCTTGAGGTTTTTAGCTATTATTACCCTTCTCTCTCTCTAAAAAATGCATTTTGGGGGGGGTATTTTAGTGATTATGTAAATTGTGTATTATTAGGCAAAGTGGGTTTTGTTTGTCTCTGCAATGTTTTCCTTTTTATCCCACCATTAATGTCCCCCATTTTCTTGGATCTTCTTGAGCTGCCATTAAAGTTACAGGCTGGGTTTTGAATTCCCAAGTGAGTTGTGGATTGAGAATCCAAATTTGGATGATATTTC ATGTTGTGCAGAAGAATCTCCAGCAATGGCGATTCCGGATCCGCTCCAGTGTACCTCAATGTGTACGATCTGACGCCCATTAATGGCTATGCATATTGGTTTGGCCTCGGTGTTTTTCATTCTGGTGTTCAAGTTCATGGAATTGAATTTGCATTTGGGGCTCATGAATATCCAAGCACAGGGATATTTGAAGGGGAACCGAAGCAATGTGATGGATTCAAGTTCAGAAAATCGATTTTGATTGGGAAAACAGATTTGAGTCAAGCAGAAGTGAGATCATTAATGGAGGAACTTAGTAAAGATTACAGAGGAAATGCTTATAATCTAATCACCAAAAATTGCAACCATTTTTGCAATCATGTTTGCATCAAACTCACTGGAAATTCCATTCCAAATTGGGTCAATCGCCTTGCTAGGATTGGGTGGATTTGCAACTGTGTTTTACCAGCAACCTTAAACTCCACAAAATTTGGACAAAACAGAGTGCAAAAAAAGACAAGTGAAGAAAAACAACAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGGAATCCCCAATAACAGTTGAAATTGCAGCTTCTAATTCTTCTTCTTCTTCTTCTTCTTCTCCAACAATTCTTCGCAGAGGCAGAAGCAGAACCAGACGCCCTCGTCCCCAAAGTTCACCATTGATTCCCACTTCAAATTCTTGA MLCRRISSNGDSGSAPVYLNVYDLTPINGYAYWFGLGVFHSGVQVHGIEFAFGAHEYPSTGIFEGEPKQCDGFKFRKSILIGKTDLSQAEVRSLMEELSKDYRGNAYNLITKNCNHFCNHVCIKLTGNSIPNWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTSEEKQQEEEEEEEEKKKKESPITVEIAASNSSSSSSSSPTILRRGRSRTRRPRPQSSPLIPTSNS Homology
BLAST of Tan0017246 vs. ExPASy Swiss-Prot
Match: Q93VG8 (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.1e-50 Identity = 90/188 (47.87%), Postives = 131/188 (69.68%), Query Frame = 0
BLAST of Tan0017246 vs. ExPASy Swiss-Prot
Match: Q5PQ09 (Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 7.3e-31 Identity = 80/194 (41.24%), Postives = 115/194 (59.28%), Query Frame = 0
BLAST of Tan0017246 vs. ExPASy Swiss-Prot
Match: Q6DC39 (Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.8e-29 Identity = 75/178 (42.13%), Postives = 109/178 (61.24%), Query Frame = 0
BLAST of Tan0017246 vs. ExPASy Swiss-Prot
Match: Q9D291 (Deubiquitinase DESI2 OS=Mus musculus OX=10090 GN=Desi2 PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.8e-29 Identity = 71/169 (42.01%), Postives = 105/169 (62.13%), Query Frame = 0
BLAST of Tan0017246 vs. ExPASy Swiss-Prot
Match: Q5XIT6 (Deubiquitinase DESI2 OS=Rattus norvegicus OX=10116 GN=Desi2 PE=2 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.8e-29 Identity = 71/169 (42.01%), Postives = 105/169 (62.13%), Query Frame = 0
BLAST of Tan0017246 vs. NCBI nr
Match: XP_022153427.1 (deSI-like protein At4g17486 [Momordica charantia]) HSP 1 Score: 419.5 bits (1077), Expect = 1.9e-113 Identity = 216/233 (92.70%), Postives = 221/233 (94.85%), Query Frame = 0
BLAST of Tan0017246 vs. NCBI nr
Match: KAG6606828.1 (DeSI-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 410.6 bits (1054), Expect = 8.9e-111 Identity = 210/233 (90.13%), Postives = 220/233 (94.42%), Query Frame = 0
BLAST of Tan0017246 vs. NCBI nr
Match: XP_022948456.1 (deSI-like protein At4g17486 [Cucurbita moschata]) HSP 1 Score: 409.8 bits (1052), Expect = 1.5e-110 Identity = 210/233 (90.13%), Postives = 219/233 (93.99%), Query Frame = 0
BLAST of Tan0017246 vs. NCBI nr
Match: XP_022997695.1 (deSI-like protein At4g17486 [Cucurbita maxima]) HSP 1 Score: 406.8 bits (1044), Expect = 1.3e-109 Identity = 208/233 (89.27%), Postives = 217/233 (93.13%), Query Frame = 0
BLAST of Tan0017246 vs. NCBI nr
Match: XP_023523783.1 (deSI-like protein At4g17486 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 406.8 bits (1044), Expect = 1.3e-109 Identity = 208/234 (88.89%), Postives = 218/234 (93.16%), Query Frame = 0
BLAST of Tan0017246 vs. ExPASy TrEMBL
Match: A0A6J1DIV3 (deSI-like protein At4g17486 OS=Momordica charantia OX=3673 GN=LOC111020936 PE=3 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 9.3e-114 Identity = 216/233 (92.70%), Postives = 221/233 (94.85%), Query Frame = 0
BLAST of Tan0017246 vs. ExPASy TrEMBL
Match: A0A6J1G994 (deSI-like protein At4g17486 OS=Cucurbita moschata OX=3662 GN=LOC111452135 PE=3 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 7.4e-111 Identity = 210/233 (90.13%), Postives = 219/233 (93.99%), Query Frame = 0
BLAST of Tan0017246 vs. ExPASy TrEMBL
Match: A0A6J1KAM3 (deSI-like protein At4g17486 OS=Cucurbita maxima OX=3661 GN=LOC111492581 PE=3 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 6.2e-110 Identity = 208/233 (89.27%), Postives = 217/233 (93.13%), Query Frame = 0
BLAST of Tan0017246 vs. ExPASy TrEMBL
Match: A0A0A0KX01 (PPPDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006490 PE=3 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 1.1e-106 Identity = 205/235 (87.23%), Postives = 217/235 (92.34%), Query Frame = 0
BLAST of Tan0017246 vs. ExPASy TrEMBL
Match: A0A1S3BXH1 (deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103494655 PE=3 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 7.1e-106 Identity = 202/234 (86.32%), Postives = 218/234 (93.16%), Query Frame = 0
BLAST of Tan0017246 vs. TAIR 10
Match: AT1G80690.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 297.0 bits (759), Expect = 1.3e-80 Identity = 156/233 (66.95%), Postives = 184/233 (78.97%), Query Frame = 0
BLAST of Tan0017246 vs. TAIR 10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 234.6 bits (597), Expect = 8.1e-62 Identity = 131/231 (56.71%), Postives = 155/231 (67.10%), Query Frame = 0
BLAST of Tan0017246 vs. TAIR 10
Match: AT2G25190.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 225.7 bits (574), Expect = 3.8e-59 Identity = 124/234 (52.99%), Postives = 154/234 (65.81%), Query Frame = 0
BLAST of Tan0017246 vs. TAIR 10
Match: AT4G31980.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). ) HSP 1 Score: 224.9 bits (572), Expect = 6.5e-59 Identity = 119/229 (51.97%), Postives = 163/229 (71.18%), Query Frame = 0
BLAST of Tan0017246 vs. TAIR 10
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 209.1 bits (531), Expect = 3.7e-54 Identity = 106/203 (52.22%), Postives = 136/203 (67.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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